View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14140_low_1 (Length: 765)

Name: NF14140_low_1
Description: NF14140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14140_low_1
NF14140_low_1
[»] chr8 (91 HSPs)
chr8 (19-153)||(31866686-31866820)
chr8 (173-295)||(1958169-1958291)
chr8 (173-295)||(45101014-45101136)
chr8 (167-293)||(35931816-35931942)
chr8 (496-638)||(42860223-42860367)
chr8 (496-638)||(45100652-45100795)
chr8 (171-295)||(43525078-43525202)
chr8 (171-295)||(15053590-15053714)
chr8 (496-638)||(35932157-35932300)
chr8 (173-295)||(12272471-12272593)
chr8 (171-295)||(13947324-13947448)
chr8 (170-293)||(40283432-40283555)
chr8 (171-294)||(43524381-43524504)
chr8 (496-708)||(15056883-15057101)
chr8 (208-295)||(43618338-43618425)
chr8 (208-294)||(35099430-35099516)
chr8 (210-295)||(42859922-42860007)
chr8 (496-623)||(12272104-12272231)
chr8 (206-293)||(26244490-26244577)
chr8 (171-295)||(18029488-18029612)
chr8 (171-295)||(1634830-1634953)
chr8 (181-293)||(29731663-29731774)
chr8 (211-295)||(23549711-23549795)
chr8 (197-295)||(36912401-36912499)
chr8 (212-295)||(44503166-44503249)
chr8 (206-295)||(44149863-44149952)
chr8 (196-295)||(26632142-26632241)
chr8 (174-285)||(31129502-31129613)
chr8 (198-295)||(34955655-34955751)
chr8 (198-295)||(41477168-41477265)
chr8 (524-638)||(26631783-26631897)
chr8 (577-638)||(31129080-31129141)
chr8 (196-285)||(38584894-38584982)
chr8 (535-638)||(1633048-1633150)
chr8 (216-294)||(5212294-5212372)
chr8 (197-295)||(8609970-8610068)
chr8 (208-294)||(17741707-17741793)
chr8 (172-239)||(42859862-42859929)
chr8 (198-295)||(4625483-4625580)
chr8 (535-636)||(40283944-40284046)
chr8 (538-638)||(26244969-26245070)
chr8 (577-638)||(26748589-26748650)
chr8 (506-638)||(41477507-41477640)
chr8 (177-285)||(29637155-29637262)
chr8 (535-638)||(29732020-29732124)
chr8 (524-624)||(30470463-30470563)
chr8 (196-284)||(30470819-30470906)
chr8 (216-295)||(42860717-42860796)
chr8 (577-624)||(13817432-13817479)
chr8 (577-638)||(13783815-13783877)
chr8 (171-294)||(38207004-38207133)
chr8 (577-638)||(42861078-42861140)
chr8 (171-260)||(23353207-23353296)
chr8 (216-295)||(5735290-5735369)
chr8 (577-624)||(8449678-8449725)
chr8 (577-624)||(18028988-18029035)
chr8 (577-624)||(34954977-34955024)
chr8 (584-706)||(38204829-38204952)
chr8 (196-293)||(39811049-39811147)
chr8 (577-638)||(5214178-5214240)
chr8 (577-623)||(5736403-5736449)
chr8 (218-295)||(13814952-13815029)
chr8 (577-638)||(30289392-30289453)
chr8 (577-636)||(4625156-4625216)
chr8 (196-295)||(7990414-7990513)
chr8 (170-257)||(7511884-7511970)
chr8 (580-638)||(13497655-13497714)
chr8 (206-277)||(30532457-30532528)
chr8 (577-624)||(36912949-36912996)
chr8 (578-624)||(7511405-7511451)
chr8 (577-638)||(17744960-17745019)
chr8 (220-293)||(30289721-30289794)
chr8 (577-638)||(1954873-1954939)
chr8 (137-173)||(31866634-31866670)
chr8 (579-638)||(30529274-30529333)
chr8 (577-624)||(43617871-43617918)
chr8 (577-624)||(44503648-44503695)
chr8 (578-636)||(8607903-8607961)
chr8 (577-638)||(23550123-23550185)
chr8 (577-638)||(35101777-35101839)
chr8 (578-624)||(39810700-39810746)
chr8 (506-567)||(17494306-17494366)
chr8 (208-285)||(26749408-26749484)
chr8 (651-708)||(44503726-44503783)
chr8 (196-256)||(24431891-24431951)
chr8 (664-708)||(26245101-26245145)
chr8 (664-708)||(40284078-40284122)
chr8 (664-708)||(43523823-43523867)
chr8 (535-610)||(13947800-13947875)
chr8 (577-624)||(26414590-26414637)
chr8 (650-708)||(44150342-44150400)
[»] chr4 (115 HSPs)
chr4 (173-295)||(6290561-6290683)
chr4 (496-754)||(8995055-8995320)
chr4 (173-294)||(34199259-34199380)
chr4 (171-295)||(8991742-8991866)
chr4 (496-754)||(3529765-3530029)
chr4 (171-295)||(3618442-3618566)
chr4 (171-295)||(40720994-40721118)
chr4 (173-295)||(3533296-3533418)
chr4 (496-754)||(40721312-40721571)
chr4 (485-638)||(16021130-16021284)
chr4 (496-636)||(34463168-34463309)
chr4 (173-294)||(23540416-23540537)
chr4 (496-638)||(55549679-55549823)
chr4 (171-295)||(28899291-28899415)
chr4 (173-295)||(55560468-55560590)
chr4 (174-295)||(38173517-38173638)
chr4 (171-295)||(48506595-48506719)
chr4 (197-295)||(16020832-16020930)
chr4 (496-754)||(34198763-34199029)
chr4 (173-295)||(45081401-45081523)
chr4 (171-295)||(13110520-13110644)
chr4 (208-295)||(46917500-46917587)
chr4 (496-638)||(13113833-13113975)
chr4 (171-293)||(16175006-16175128)
chr4 (174-295)||(33077863-33077983)
chr4 (173-294)||(56053978-56054098)
chr4 (171-295)||(33604616-33604740)
chr4 (496-632)||(52773191-52773329)
chr4 (173-293)||(13094381-13094501)
chr4 (208-295)||(2215271-2215358)
chr4 (176-295)||(52017308-52017427)
chr4 (171-293)||(35809122-35809244)
chr4 (176-293)||(4981473-4981590)
chr4 (496-638)||(28901416-28901560)
chr4 (173-292)||(31336346-31336465)
chr4 (525-708)||(33077422-33077599)
chr4 (485-638)||(38173841-38173982)
chr4 (171-294)||(33523229-33523353)
chr4 (496-638)||(23539300-23539442)
chr4 (170-285)||(39113755-39113869)
chr4 (171-293)||(19272743-19272864)
chr4 (496-638)||(56054554-56054692)
chr4 (206-294)||(48403890-48403978)
chr4 (173-293)||(52772715-52772834)
chr4 (173-295)||(18469356-18469479)
chr4 (496-638)||(31336161-31336305)
chr4 (183-295)||(23389918-23390030)
chr4 (208-293)||(34464014-34464099)
chr4 (535-638)||(35809729-35809832)
chr4 (503-623)||(48506238-48506359)
chr4 (171-295)||(17329901-17330025)
chr4 (577-638)||(21654480-21654541)
chr4 (208-293)||(27863711-27863796)
chr4 (208-284)||(54356897-54356972)
chr4 (196-294)||(47750215-47750312)
chr4 (577-638)||(3614876-3614938)
chr4 (538-638)||(19273256-19273357)
chr4 (577-638)||(23389600-23389661)
chr4 (577-638)||(45081107-45081167)
chr4 (577-705)||(16171457-16171581)
chr4 (524-635)||(36658769-36658881)
chr4 (524-624)||(40596406-40596506)
chr4 (578-708)||(48403464-48403594)
chr4 (216-295)||(53184085-53184164)
chr4 (208-283)||(12158134-12158208)
chr4 (540-638)||(33607351-33607450)
chr4 (578-624)||(31848445-31848491)
chr4 (506-624)||(39048695-39048813)
chr4 (532-638)||(28447561-28447669)
chr4 (220-295)||(31848763-31848838)
chr4 (577-624)||(2211988-2212035)
chr4 (208-294)||(10089844-10089929)
chr4 (252-295)||(27142319-27142362)
chr4 (577-624)||(46914182-46914229)
chr4 (209-284)||(55408570-55408644)
chr4 (535-638)||(13093795-13093896)
chr4 (579-638)||(17329530-17329591)
chr4 (535-638)||(27864243-27864348)
chr4 (577-638)||(53181109-53181171)
chr4 (208-285)||(39049083-39049159)
chr4 (524-638)||(19409809-19409925)
chr4 (578-638)||(34434174-34434234)
chr4 (577-624)||(7401561-7401608)
chr4 (577-624)||(18468996-18469043)
chr4 (579-624)||(55589-55634)
chr4 (485-530)||(52018005-52018050)
chr4 (196-260)||(55939-56003)
chr4 (208-260)||(19409127-19409179)
chr4 (577-624)||(27141852-27141900)
chr4 (209-285)||(39533281-39533356)
chr4 (577-638)||(47749704-47749767)
chr4 (595-638)||(52018051-52018095)
chr4 (211-294)||(53348050-53348134)
chr4 (577-636)||(55408196-55408256)
chr4 (577-624)||(21047587-21047634)
chr4 (651-714)||(38173999-38174062)
chr4 (535-638)||(53347318-53347421)
chr4 (582-624)||(12159129-12159171)
chr4 (208-293)||(33526713-33526798)
chr4 (582-624)||(33527082-33527124)
chr4 (208-284)||(36656557-36656629)
chr4 (578-624)||(39113423-39113469)
chr4 (655-708)||(19273377-19273430)
chr4 (580-624)||(10090138-10090182)
chr4 (195-247)||(35394899-35394951)
chr4 (664-708)||(35809864-35809908)
chr4 (220-295)||(40596751-40596826)
chr4 (208-256)||(51392227-51392275)
chr4 (496-543)||(28901256-28901302)
chr4 (580-623)||(39532823-39532866)
chr4 (506-568)||(39113483-39113545)
chr4 (651-708)||(3614800-3614857)
chr4 (651-708)||(18468916-18468973)
chr4 (655-708)||(27864372-27864425)
chr4 (531-568)||(52773130-52773167)
[»] chr5 (89 HSPs)
chr5 (171-295)||(27942449-27942573)
chr5 (173-295)||(19241276-19241398)
chr5 (173-295)||(32976565-32976687)
chr5 (171-293)||(40888852-40888974)
chr5 (485-638)||(31008030-31008184)
chr5 (485-754)||(19241598-19241874)
chr5 (171-295)||(7650961-7651085)
chr5 (496-638)||(23648691-23648833)
chr5 (496-638)||(23809739-23809881)
chr5 (171-295)||(31008374-31008499)
chr5 (173-293)||(42317848-42317968)
chr5 (496-638)||(42318185-42318328)
chr5 (173-295)||(30648102-30648224)
chr5 (173-295)||(42806989-42807111)
chr5 (171-295)||(25670895-25671019)
chr5 (171-294)||(27407032-27407156)
chr5 (496-618)||(13592563-13592686)
chr5 (208-295)||(31013833-31013920)
chr5 (181-295)||(29619003-29619117)
chr5 (170-295)||(36572409-36572534)
chr5 (496-638)||(29616112-29616262)
chr5 (206-295)||(23089511-23089600)
chr5 (171-293)||(13479815-13479938)
chr5 (173-295)||(14278789-14278911)
chr5 (496-638)||(36572030-36572172)
chr5 (195-295)||(8176292-8176392)
chr5 (173-294)||(3454696-3454816)
chr5 (206-295)||(39008473-39008562)
chr5 (206-295)||(4219434-4219519)
chr5 (173-293)||(39238375-39238494)
chr5 (532-707)||(42804349-42804521)
chr5 (174-289)||(32363610-32363725)
chr5 (532-638)||(4938427-4938533)
chr5 (504-623)||(30644681-30644802)
chr5 (171-295)||(23649157-23649281)
chr5 (171-295)||(23809290-23809414)
chr5 (173-256)||(37882457-37882540)
chr5 (506-624)||(34529057-34529175)
chr5 (578-708)||(3455210-3455338)
chr5 (195-295)||(41263344-41263444)
chr5 (535-638)||(4219046-4219150)
chr5 (216-295)||(4577008-4577087)
chr5 (485-638)||(7651275-7651417)
chr5 (195-286)||(41153005-41153095)
chr5 (173-294)||(4938145-4938267)
chr5 (208-285)||(25032348-25032424)
chr5 (578-708)||(25670369-25670498)
chr5 (216-295)||(25652816-25652895)
chr5 (178-286)||(34709842-34709950)
chr5 (532-638)||(27405814-27405921)
chr5 (577-636)||(32363088-32363147)
chr5 (577-638)||(27946002-27946064)
chr5 (577-638)||(32973015-32973077)
chr5 (577-705)||(40892173-40892301)
chr5 (216-295)||(10569799-10569878)
chr5 (577-638)||(4580390-4580452)
chr5 (577-638)||(31011707-31011769)
chr5 (171-285)||(42608044-42608157)
chr5 (524-624)||(41152519-41152619)
chr5 (577-624)||(25033569-25033616)
chr5 (577-624)||(25653205-25653252)
chr5 (580-638)||(7827497-7827555)
chr5 (577-638)||(13479220-13479282)
chr5 (211-295)||(27407733-27407819)
chr5 (208-277)||(9274458-9274525)
chr5 (577-638)||(41263812-41263873)
chr5 (577-636)||(9958065-9958125)
chr5 (577-625)||(14279216-14279264)
chr5 (535-638)||(23089872-23089976)
chr5 (577-624)||(8176012-8176059)
chr5 (577-624)||(21368635-21368682)
chr5 (538-638)||(39238886-39238988)
chr5 (218-295)||(8681277-8681354)
chr5 (506-624)||(12913162-12913279)
chr5 (506-623)||(8680962-8681076)
chr5 (208-283)||(11954772-11954846)
chr5 (218-285)||(12912875-12912941)
chr5 (197-256)||(34529410-34529469)
chr5 (211-285)||(15972565-15972638)
chr5 (578-624)||(15972968-15973014)
chr5 (217-285)||(34918478-34918543)
chr5 (578-624)||(37882121-37882167)
chr5 (655-708)||(39239009-39239062)
chr5 (578-638)||(2300200-2300262)
chr5 (650-708)||(7651436-7651494)
chr5 (506-568)||(27407473-27407535)
chr5 (651-708)||(9958143-9958200)
chr5 (531-568)||(13592710-13592747)
chr5 (577-638)||(39008890-39008951)
[»] chr3 (138 HSPs)
chr3 (171-295)||(50415819-50415943)
chr3 (173-295)||(29701644-29701766)
chr3 (173-295)||(30418418-30418540)
chr3 (496-754)||(6044837-6045102)
chr3 (171-293)||(44084269-44084391)
chr3 (171-292)||(51999229-51999350)
chr3 (171-295)||(6048685-6048809)
chr3 (173-293)||(32120429-32120549)
chr3 (496-731)||(10424190-10424426)
chr3 (496-638)||(50734316-50734459)
chr3 (496-638)||(50778396-50778539)
chr3 (485-638)||(41183559-41183713)
chr3 (496-638)||(51998866-51999010)
chr3 (496-754)||(32119942-32120209)
chr3 (496-638)||(37182696-37182839)
chr3 (170-295)||(41183233-41183358)
chr3 (496-636)||(42564246-42564387)
chr3 (496-754)||(44084608-44084873)
chr3 (173-293)||(4045942-4046062)
chr3 (496-638)||(4046420-4046564)
chr3 (171-294)||(10426421-10426544)
chr3 (173-295)||(26165543-26165665)
chr3 (171-281)||(37183840-37183950)
chr3 (173-295)||(50733978-50734100)
chr3 (173-295)||(50778755-50778877)
chr3 (171-295)||(38572143-38572267)
chr3 (171-295)||(55026699-55026823)
chr3 (208-295)||(17466512-17466599)
chr3 (173-288)||(43473852-43473967)
chr3 (197-293)||(42560887-42560983)
chr3 (173-295)||(36178693-36178816)
chr3 (208-295)||(25790764-25790851)
chr3 (171-269)||(7008015-7008113)
chr3 (206-295)||(12974663-12974753)
chr3 (173-295)||(27847371-27847493)
chr3 (173-293)||(46572916-46573036)
chr3 (208-293)||(47144170-47144255)
chr3 (485-638)||(29701955-29702098)
chr3 (208-295)||(5845129-5845216)
chr3 (206-295)||(11908014-11908103)
chr3 (171-295)||(20139320-20139445)
chr3 (496-623)||(55027063-55027190)
chr3 (201-295)||(6832374-6832468)
chr3 (175-294)||(138939-139059)
chr3 (496-624)||(20139857-20139985)
chr3 (198-295)||(42601748-42601845)
chr3 (182-291)||(46123897-46124006)
chr3 (173-295)||(48886975-48887092)
chr3 (540-708)||(12975173-12975343)
chr3 (171-279)||(35472631-35472739)
chr3 (577-708)||(4873721-4873846)
chr3 (496-624)||(38571789-38571921)
chr3 (508-638)||(7008422-7008560)
chr3 (173-282)||(28155230-28155339)
chr3 (535-636)||(46136902-46137003)
chr3 (196-295)||(41890520-41890618)
chr3 (216-295)||(42601494-42601573)
chr3 (216-295)||(49823159-49823238)
chr3 (216-295)||(51427105-51427184)
chr3 (496-638)||(15007495-15007640)
chr3 (535-708)||(31169830-31169997)
chr3 (208-286)||(49147287-49147364)
chr3 (196-285)||(25832724-25832811)
chr3 (220-293)||(51304347-51304420)
chr3 (198-295)||(52000051-52000148)
chr3 (216-295)||(33934996-33935075)
chr3 (209-284)||(35853193-35853267)
chr3 (209-284)||(43022646-43022720)
chr3 (170-284)||(47701063-47701177)
chr3 (524-638)||(49086464-49086579)
chr3 (209-284)||(49710390-49710464)
chr3 (577-708)||(11908419-11908550)
chr3 (208-293)||(25450625-25450710)
chr3 (577-638)||(26162166-26162228)
chr3 (577-638)||(30415088-30415150)
chr3 (532-638)||(35540195-35540303)
chr3 (535-638)||(35471942-35472048)
chr3 (208-295)||(37410408-37410495)
chr3 (506-624)||(46572601-46572720)
chr3 (540-638)||(48886459-48886558)
chr3 (577-638)||(25787386-25787448)
chr3 (577-638)||(25829343-25829405)
chr3 (209-294)||(28410392-28410477)
chr3 (577-638)||(33934873-33934935)
chr3 (577-638)||(42598041-42598103)
chr3 (532-638)||(6832948-6833055)
chr3 (208-285)||(35424009-35424085)
chr3 (183-268)||(49028559-49028644)
chr3 (577-638)||(49822576-49822637)
chr3 (216-285)||(50017058-50017126)
chr3 (577-708)||(51999626-51999756)
chr3 (577-638)||(27847966-27848029)
chr3 (208-295)||(33748682-33748769)
chr3 (577-624)||(5844664-5844711)
chr3 (577-624)||(17469797-17469844)
chr3 (577-624)||(42602251-42602298)
chr3 (532-637)||(43475751-43475862)
chr3 (577-624)||(47147654-47147701)
chr3 (535-638)||(51304897-51305003)
chr3 (577-638)||(25450111-25450173)
chr3 (209-259)||(42258315-42258365)
chr3 (577-706)||(49026979-49027106)
chr3 (578-636)||(50020377-50020435)
chr3 (577-638)||(51436008-51436070)
chr3 (208-277)||(7521145-7521213)
chr3 (532-624)||(33187753-33187846)
chr3 (578-638)||(36178111-36178172)
chr3 (209-294)||(15493812-15493895)
chr3 (578-638)||(26549872-26549932)
chr3 (577-624)||(33751694-33751741)
chr3 (577-624)||(37410130-37410177)
chr3 (577-624)||(49356931-49356978)
chr3 (579-625)||(7520772-7520818)
chr3 (580-638)||(15493408-15493466)
chr3 (577-638)||(28410775-28410837)
chr3 (577-638)||(35852869-35852931)
chr3 (577-638)||(43022984-43023046)
chr3 (577-618)||(50034673-50034714)
chr3 (220-260)||(744225-744265)
chr3 (216-295)||(49357486-49357565)
chr3 (220-260)||(50176109-50176149)
chr3 (577-624)||(30688547-30688594)
chr3 (577-624)||(33795155-33795201)
chr3 (577-624)||(49146963-49147010)
chr3 (577-624)||(53722873-53722920)
chr3 (206-248)||(31170261-31170303)
chr3 (577-638)||(49710131-49710193)
chr3 (655-708)||(51305024-51305077)
chr3 (578-638)||(35423636-35423696)
chr3 (577-624)||(50415452-50415498)
chr3 (581-624)||(51974630-51974673)
chr3 (582-624)||(30862455-30862497)
chr3 (208-284)||(33795496-33795568)
chr3 (650-708)||(36178036-36178094)
chr3 (584-622)||(39291089-39291127)
chr3 (650-708)||(48886386-48886444)
chr3 (208-286)||(49407336-49407413)
chr3 (651-708)||(42564407-42564464)
[»] chr7 (73 HSPs)
chr7 (496-754)||(42881904-42882155)
chr7 (170-295)||(36518473-36518598)
chr7 (496-638)||(28317711-28317853)
chr7 (171-295)||(47159484-47159607)
chr7 (174-295)||(37951709-37951832)
chr7 (496-638)||(30720420-30720561)
chr7 (173-295)||(42881319-42881441)
chr7 (171-295)||(30720079-30720203)
chr7 (496-638)||(40300560-40300705)
chr7 (497-754)||(47158920-47159181)
chr7 (171-295)||(40302480-40302604)
chr7 (173-293)||(33078776-33078896)
chr7 (177-293)||(37887812-37887928)
chr7 (182-293)||(30566570-30566681)
chr7 (171-293)||(45549610-45549732)
chr7 (496-609)||(22660183-22660296)
chr7 (198-295)||(39769715-39769812)
chr7 (208-295)||(5813094-5813181)
chr7 (208-295)||(35029098-35029185)
chr7 (173-293)||(33508517-33508638)
chr7 (171-281)||(28318046-28318156)
chr7 (206-295)||(20354217-20354306)
chr7 (210-295)||(32130260-32130345)
chr7 (496-708)||(33508164-33508372)
chr7 (171-295)||(26812072-26812196)
chr7 (496-638)||(33078433-33078577)
chr7 (197-295)||(22737584-22737682)
chr7 (174-295)||(22656629-22656750)
chr7 (577-638)||(26815505-26815566)
chr7 (577-638)||(32126881-32126942)
chr7 (577-638)||(32749333-32749394)
chr7 (577-708)||(39770110-39770238)
chr7 (196-295)||(22191205-22191303)
chr7 (163-294)||(32748748-32748879)
chr7 (524-638)||(37888708-37888822)
chr7 (532-636)||(115010-115116)
chr7 (209-284)||(43571095-43571169)
chr7 (198-295)||(24793477-24793574)
chr7 (506-624)||(35192748-35192866)
chr7 (577-638)||(40690707-40690769)
chr7 (524-624)||(30630279-30630380)
chr7 (208-295)||(114486-114573)
chr7 (216-295)||(21654850-21654929)
chr7 (208-295)||(35193108-35193195)
chr7 (217-293)||(38351584-38351660)
chr7 (496-567)||(30566922-30566993)
chr7 (577-638)||(5813659-5813721)
chr7 (535-636)||(37952115-37952217)
chr7 (537-638)||(45549018-45549120)
chr7 (578-624)||(48985265-48985311)
chr7 (532-618)||(38970384-38970472)
chr7 (578-638)||(24793818-24793878)
chr7 (216-295)||(30630803-30630882)
chr7 (577-638)||(36521878-36521941)
chr7 (198-294)||(38970017-38970115)
chr7 (216-295)||(48984911-48984990)
chr7 (577-624)||(35028464-35028511)
chr7 (577-638)||(22194613-22194675)
chr7 (214-295)||(25038582-25038663)
chr7 (577-638)||(37888220-37888282)
chr7 (578-623)||(33379667-33379712)
chr7 (577-623)||(25217935-25217981)
chr7 (577-638)||(38351995-38352057)
chr7 (577-638)||(43570771-43570833)
chr7 (211-295)||(25218797-25218881)
chr7 (650-708)||(22660323-22660381)
chr7 (173-247)||(24204278-24204352)
chr7 (582-624)||(25038236-25038278)
chr7 (196-260)||(43202163-43202228)
chr7 (655-708)||(45548946-45548999)
chr7 (224-294)||(26013189-26013258)
chr7 (183-235)||(37888523-37888575)
chr7 (588-637)||(1939556-1939604)
[»] chr2 (71 HSPs)
chr2 (496-754)||(22349407-22349672)
chr2 (171-295)||(7588492-7588618)
chr2 (496-754)||(43021991-43022248)
chr2 (171-295)||(22351604-22351728)
chr2 (496-638)||(14383271-14383415)
chr2 (496-638)||(44280418-44280561)
chr2 (183-295)||(43021713-43021825)
chr2 (496-638)||(36527120-36527265)
chr2 (173-294)||(36526783-36526904)
chr2 (171-295)||(14382927-14383051)
chr2 (170-293)||(44279951-44280074)
chr2 (173-295)||(1073073-1073195)
chr2 (171-295)||(9117772-9117896)
chr2 (170-285)||(14152067-14152182)
chr2 (208-293)||(24997077-24997162)
chr2 (171-295)||(12854980-12855103)
chr2 (208-295)||(4296761-4296848)
chr2 (208-295)||(30822573-30822660)
chr2 (171-283)||(7763489-7763602)
chr2 (208-295)||(8852054-8852141)
chr2 (184-294)||(39490116-39490226)
chr2 (496-623)||(1072705-1072833)
chr2 (206-294)||(17485812-17485900)
chr2 (171-295)||(17929245-17929369)
chr2 (183-295)||(36209464-36209576)
chr2 (173-285)||(6362916-6363027)
chr2 (196-295)||(13151473-13151573)
chr2 (208-295)||(37245498-37245585)
chr2 (208-295)||(1308687-1308774)
chr2 (532-638)||(4279428-4279535)
chr2 (503-623)||(9118132-9118253)
chr2 (208-284)||(927893-927968)
chr2 (535-638)||(7762810-7762914)
chr2 (171-253)||(38997290-38997372)
chr2 (577-638)||(17928833-17928894)
chr2 (216-295)||(9074214-9074293)
chr2 (208-295)||(38901717-38901804)
chr2 (206-285)||(5146711-5146790)
chr2 (577-638)||(7585161-7585223)
chr2 (524-638)||(926478-926594)
chr2 (524-638)||(12858218-12858334)
chr2 (524-638)||(30819295-30819411)
chr2 (208-295)||(31192973-31193060)
chr2 (208-294)||(1987116-1987202)
chr2 (577-636)||(36855036-36855095)
chr2 (577-638)||(1308310-1308370)
chr2 (578-623)||(39432405-39432450)
chr2 (579-638)||(2778775-2778834)
chr2 (577-624)||(4296295-4296342)
chr2 (577-624)||(8855380-8855427)
chr2 (577-624)||(13151224-13151271)
chr2 (208-294)||(39434002-39434088)
chr2 (577-638)||(1987525-1987587)
chr2 (536-638)||(6363729-6363831)
chr2 (532-622)||(14151882-14151974)
chr2 (577-638)||(43494896-43494956)
chr2 (211-294)||(36855764-36855846)
chr2 (197-260)||(6333402-6333465)
chr2 (577-616)||(9072621-9072660)
chr2 (580-638)||(31184915-31184974)
chr2 (577-624)||(36209104-36209151)
chr2 (577-624)||(37246035-37246082)
chr2 (577-638)||(5144998-5145059)
chr2 (216-285)||(31174186-31174253)
chr2 (216-284)||(2780738-2780805)
chr2 (580-624)||(31204656-31204700)
chr2 (577-638)||(6332924-6332988)
chr2 (209-259)||(16218900-16218950)
chr2 (651-708)||(13151169-13151226)
chr2 (506-567)||(43494974-43495035)
chr2 (531-568)||(44280357-44280394)
[»] chr6 (51 HSPs)
chr6 (173-295)||(34838541-34838663)
chr6 (171-295)||(8660517-8660641)
chr6 (171-295)||(8669848-8669972)
chr6 (171-294)||(30446202-30446325)
chr6 (496-638)||(10886540-10886683)
chr6 (173-294)||(10883832-10883953)
chr6 (171-295)||(24348391-24348515)
chr6 (208-295)||(631513-631600)
chr6 (171-294)||(12501790-12501913)
chr6 (208-295)||(34328276-34328363)
chr6 (208-294)||(197799-197885)
chr6 (496-638)||(12502210-12502353)
chr6 (208-295)||(17961253-17961340)
chr6 (496-638)||(12513327-12513469)
chr6 (198-294)||(12512898-12512994)
chr6 (496-638)||(30446564-30446710)
chr6 (505-638)||(8222422-8222558)
chr6 (171-280)||(12480275-12480384)
chr6 (209-293)||(26654327-26654411)
chr6 (209-293)||(26760297-26760381)
chr6 (577-638)||(8668817-8668878)
chr6 (216-295)||(6380478-6380557)
chr6 (208-284)||(29428519-29428594)
chr6 (232-295)||(8218964-8219027)
chr6 (173-277)||(22627796-22627899)
chr6 (209-284)||(6725626-6725700)
chr6 (535-638)||(26653783-26653888)
chr6 (535-638)||(26759752-26759857)
chr6 (577-638)||(34841858-34841920)
chr6 (577-638)||(198208-198269)
chr6 (577-638)||(29951703-29951764)
chr6 (524-638)||(635009-635125)
chr6 (206-295)||(24933271-24933361)
chr6 (210-293)||(32359743-32359826)
chr6 (577-638)||(6377108-6377170)
chr6 (577-638)||(17957976-17958038)
chr6 (577-638)||(24348859-24348921)
chr6 (252-295)||(2503264-2503307)
chr6 (577-624)||(2503726-2503773)
chr6 (577-624)||(34328781-34328828)
chr6 (173-239)||(34242232-34242298)
chr6 (524-624)||(32360076-32360176)
chr6 (532-638)||(34242743-34242849)
chr6 (577-638)||(6725300-6725362)
chr6 (577-638)||(7541324-7541384)
chr6 (504-553)||(24115358-24115407)
chr6 (655-708)||(26653710-26653763)
chr6 (664-708)||(26759678-26759722)
chr6 (250-294)||(34242343-34242387)
chr6 (650-707)||(8668896-8668953)
chr6 (651-708)||(12502368-12502425)
[»] chr1 (92 HSPs)
chr1 (173-295)||(2478317-2478439)
chr1 (496-638)||(45623158-45623301)
chr1 (496-754)||(48384683-48384949)
chr1 (173-295)||(48388097-48388219)
chr1 (496-638)||(37690924-37691065)
chr1 (496-638)||(51494101-51494244)
chr1 (173-295)||(51494461-51494583)
chr1 (496-638)||(19578540-19578684)
chr1 (496-635)||(29919669-29919809)
chr1 (177-295)||(36230319-36230437)
chr1 (173-294)||(23092727-23092848)
chr1 (173-294)||(48404288-48404409)
chr1 (496-754)||(31159733-31159989)
chr1 (171-293)||(14096647-14096769)
chr1 (173-295)||(31159345-31159467)
chr1 (496-638)||(14096987-14097131)
chr1 (173-295)||(45456140-45456262)
chr1 (171-295)||(29919326-29919451)
chr1 (198-294)||(29523686-29523782)
chr1 (198-293)||(30878535-30878630)
chr1 (171-289)||(8468280-8468398)
chr1 (496-638)||(10265660-10265804)
chr1 (204-293)||(19578901-19578990)
chr1 (208-295)||(45239131-45239218)
chr1 (496-638)||(17675973-17676114)
chr1 (173-295)||(45623519-45623641)
chr1 (208-293)||(31468126-31468211)
chr1 (171-295)||(37691279-37691402)
chr1 (208-295)||(27630449-27630536)
chr1 (208-295)||(37420333-37420420)
chr1 (211-294)||(37646550-37646633)
chr1 (171-294)||(37822525-37822649)
chr1 (496-624)||(48407670-48407800)
chr1 (532-638)||(43739367-43739473)
chr1 (206-288)||(35847117-35847199)
chr1 (535-638)||(51156313-51156416)
chr1 (208-295)||(8464092-8464179)
chr1 (577-706)||(29524285-29524413)
chr1 (211-294)||(33164408-33164491)
chr1 (198-295)||(44651057-44651153)
chr1 (208-295)||(44334282-44334369)
chr1 (216-295)||(44451259-44451338)
chr1 (208-295)||(17783370-17783457)
chr1 (537-638)||(33167556-33167659)
chr1 (173-295)||(51156877-51156999)
chr1 (577-638)||(2474751-2474813)
chr1 (184-293)||(3755019-3755128)
chr1 (220-294)||(47300487-47300561)
chr1 (198-295)||(41542313-41542408)
chr1 (524-637)||(45242379-45242494)
chr1 (577-714)||(45363862-45363998)
chr1 (578-624)||(643494-643540)
chr1 (580-638)||(37646067-37646125)
chr1 (216-277)||(643830-643890)
chr1 (577-638)||(8464948-8465009)
chr1 (578-638)||(37822984-37823045)
chr1 (175-288)||(43738940-43739053)
chr1 (577-638)||(52930322-52930383)
chr1 (219-295)||(52933757-52933833)
chr1 (219-295)||(52941392-52941468)
chr1 (577-638)||(8471594-8471657)
chr1 (196-260)||(20584875-20584939)
chr1 (504-568)||(41542616-41542680)
chr1 (197-288)||(17681256-17681350)
chr1 (577-624)||(27629984-27630031)
chr1 (577-624)||(31471569-31471616)
chr1 (577-708)||(36231305-36231435)
chr1 (506-638)||(36303405-36303538)
chr1 (577-624)||(37419868-37419915)
chr1 (580-638)||(44450894-44450953)
chr1 (580-638)||(44651459-44651518)
chr1 (177-268)||(45362680-45362771)
chr1 (578-638)||(51523649-51523711)
chr1 (219-295)||(51520221-51520298)
chr1 (536-624)||(30878276-30878363)
chr1 (577-624)||(17786627-17786674)
chr1 (532-624)||(47297233-47297326)
chr1 (506-638)||(48729745-48729876)
chr1 (208-295)||(36302975-36303062)
chr1 (208-295)||(44929279-44929366)
chr1 (208-295)||(48729315-48729402)
chr1 (577-625)||(48927257-48927305)
chr1 (577-624)||(20584464-20584511)
chr1 (578-624)||(3754699-3754745)
chr1 (651-708)||(47297150-47297207)
chr1 (650-714)||(37823061-37823125)
chr1 (197-285)||(40500382-40500468)
chr1 (577-638)||(39149524-39149586)
chr1 (578-624)||(44334661-44334707)
chr1 (650-708)||(45455461-45455519)
chr1 (651-708)||(2474675-2474732)
chr1 (207-295)||(10266949-10267035)
[»] scaffold0054 (2 HSPs)
scaffold0054 (173-295)||(57732-57854)
scaffold0054 (207-287)||(55062-55141)
[»] scaffold0362 (1 HSPs)
scaffold0362 (173-291)||(5316-5434)
[»] scaffold1905 (2 HSPs)
scaffold1905 (496-638)||(229-373)
scaffold1905 (535-638)||(1061-1166)
[»] scaffold0016 (1 HSPs)
scaffold0016 (173-293)||(66063-66183)
[»] scaffold0021 (1 HSPs)
scaffold0021 (577-708)||(109781-109907)
[»] scaffold0758 (1 HSPs)
scaffold0758 (577-638)||(6348-6409)
[»] scaffold0100 (1 HSPs)
scaffold0100 (183-295)||(30527-30639)
[»] scaffold0012 (2 HSPs)
scaffold0012 (506-624)||(124349-124467)
scaffold0012 (198-295)||(124001-124096)
[»] scaffold0004 (1 HSPs)
scaffold0004 (535-617)||(106173-106255)
[»] scaffold1183 (1 HSPs)
scaffold1183 (577-624)||(26-73)
[»] scaffold0007 (1 HSPs)
scaffold0007 (219-259)||(170661-170701)


Alignment Details
Target: chr8 (Bit Score: 135; Significance: 6e-70; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 31866820 - 31866686
Alignment:
Q  19 atcagctaccttgacatatatgatttaaatttgtgatatcaagtgtttgtttgagtatgggggtgacaacaattgattttgaatgaatcaatttcataaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31866820 atcagctaccttgacatatatgatttaaatttgtgatatcaagtgtttgtttgagtatgggggtgacaacaattgattttgaatgaatcaatttcataaa 31866721  T
Q  119 ttaaaattgattttaattaaaagtgatttggatgt 153  Q
    |||||||||||||||||||||||||||||||||||    
T  31866720 ttaaaattgattttaattaaaagtgatttggatgt 31866686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 1958291 - 1958169
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1958291 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 1958192  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  1958191 ttcaatttttacctctccaatgg 1958169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 45101136 - 45101014
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45101136 agaccatttacaatggcaaaatatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 45101037  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  45101036 ttcaatttttacctctccaatgg 45101014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 167 - 293
Target Start/End: Original strand, 35931816 - 35931942
Alignment:
Q  167 ttggttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaa 266  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35931816 ttggttagaccatttacaatggtaaaacaaattcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaa 35931915  T
Q  267 cacccattcaatttttacctctccaat 293  Q
    ||||| |||||||||||||||||||||    
T  35931916 caccctttcaatttttacctctccaat 35931942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 42860223 - 42860367
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||    
T  42860223 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 42860322  T
Q  595 atccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  42860323 atccaagtctctatttatagagagaaaaaaattacgaattttggt 42860367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 45100795 - 45100652
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnc-tgtgtccaaatcaaatg 594  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||        | |||||||||||||||||    
T  45100795 aaataaacactaaaacttccaaagaaagactaatacaaagctaataataagattaagagagtgaaaaacttgattttttttcctgtgtccaaatcaaatg 45100696  T
Q  595 atccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45100695 atccaagtctctatttatagagaaaaaaaattacgaattttggt 45100652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 43525202 - 43525078
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||     
T  43525202 ttagaccatttacgatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacact 43525103  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  43525102 cattcaatttttacctctccaatgg 43525078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 15053590 - 15053714
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||| | | | ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15053590 ttagaccatttacaatggtcacaaatattcaacaatcatcaacacccactttttcaattcccaacactccgcatcattttctctctcttaattcaacacc 15053689  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    ||||||||||||||| |||||||||    
T  15053690 cattcaatttttaccactccaatgg 15053714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 35932157 - 35932300
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |        |||||||||||||||||||    
T  35932157 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatga 35932256  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |  |||||||||||||||||| ||||||||| ||||||||||||    
T  35932257 tttaagtctctatttatagagaaaaaaaaatcacgaattttggt 35932300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 12272593 - 12272471
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||    
T  12272593 agactatttacaatggtaaaataaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactca 12272494  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  12272493 ttcaatttttacctctccaatgg 12272471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 13947324 - 13947448
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||  |||||||||||| |  ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  13947324 ttagaccatgaacaatggtaaaaaaatttcaatacccttcaacacctactttttcaattcccaacactccacatcattttctttctcataattcaacacc 13947423  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  13947424 cattcaatttttacctctccaatgg 13947448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 40283432 - 40283555
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    |||||||||| |||||||| |||| |  ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40283432 gttagaccatgtacaatggaaaaaaaatttcaatacctttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacac 40283531  T
Q  270 ccattcaatttttacctctccaat 293  Q
    ||||||||||||||||||||||||    
T  40283532 ccattcaatttttacctctccaat 40283555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 43524504 - 43524381
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| ||||||||| ||| |  ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  43524504 ttagaccatgtacaatggttaaaaaatttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacact 43524405  T
Q  271 cattcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||||    
T  43524404 cattcaatttttacctctccaatg 43524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 496 - 708
Target Start/End: Original strand, 15056883 - 15057101
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  15056883 aaataaagactaaaactttaaaagaaaagctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 15056982  T
Q  596 tccaagtctctatttatagagaaaaaaaa--ttacgaattttggtnnnnnnnnnnntaaaa----ttatttaccatgaaataattgagttcatattagta 689  Q
    | |||||||||||||||||||| | ||||  ||||||||||||||           |||||    |||||| | ||||||||||||||| || |||| ||    
T  15056983 ttcaagtctctatttatagagagagaaaaatttacgaattttggtaaaaaaaaaattaaaaaaaattatttgcaatgaaataattgagtccaaattatta 15057082  T
Q  690 agaaaataaaaatccaagc 708  Q
    |||| ||||||||||||||    
T  15057083 agaagataaaaatccaagc 15057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 43618425 - 43618338
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43618425 ttcaacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacctctccaatgg 43618338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 35099430 - 35099516
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35099430 ttcaacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaatttttacctctccaatg 35099516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 42859922 - 42860007
Alignment:
Q  210 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  42859922 caacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacatctccaatgg 42860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 623
Target Start/End: Complemental strand, 12272231 - 12272104
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| |||||||||| |||||||| ||||||| |||| ||||||| | |||||||||||||||||||||         |||||||||||||||||||    
T  12272231 aaataaagactaaaactttaaaagaaaagctaatagaaagataataataatattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatga 12272132  T
Q  596 tccaagtctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||||||||||||    
T  12272131 tccaagtctctatttatagagaaaaaaa 12272104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 293
Target Start/End: Original strand, 26244490 - 26244577
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  26244490 ccttcaacattcactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaatttttacctctccaat 26244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 18029612 - 18029488
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| | |||||||  || |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  18029612 ttagaccatctccaatggttcaacacattcaacaccattcgacacccactttttcaattcccaacactccacatcattttctctctctt-attcaacact 18029514  T
Q  271 cattcaattttta-cctctccaatgg 295  Q
    ||||||| ||||| ||||||||||||    
T  18029513 cattcaacttttaccctctccaatgg 18029488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 1634953 - 1634830
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |||||||  |||| | |||||| | |||||||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  1634953 ttagaccatgtacaatgacaaaaaaaattcaatacccttcaacactcactttt-caattctcaacactccacatcattttctctctcataattcaacacc 1634855  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||| |||||||||||| |||||    
T  1634854 cattcagtttttacctctctaatgg 1634830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 29731663 - 29731774
Alignment:
Q  181 tacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattt 280  Q
    |||||||| |||| |  ||||| | ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  29731663 tacaatgggaaaaaaatttcaatacccttcaacacccactttttcaattcccaacactccacgtcatttt-tctctcataattcaacacccattcaattt 29731761  T
Q  281 ttacctctccaat 293  Q
    ||| |||||||||    
T  29731762 ttaactctccaat 29731774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 23549711 - 23549795
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||| | ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23549711 aacacctattttttcaattcccaacactccacactattttctctctcataattcaacacccattcaatttttacctctccaatgg 23549795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 36912401 - 36912499
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  36912401 attcaacaccattcaacacccactttttcaattcccaacactctacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 36912499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 44503166 - 44503249
Alignment:
Q  212 acacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  44503166 acacacactttttcaattcccaacactccacgtcattttctctctcttaattgaacacccattcaatttttatctcttcaatgg 44503249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 44149863 - 44149952
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||| |||||||| |||| |||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  44149863 ccttcaacactcacttttttaatttccaacattccacatcattttctctttcataattcaatacccattcaatttttacctctccaatgg 44149952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 26632241 - 26632142
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatg 294  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||| |||||| ||||||||||    
T  26632241 cattcaacaccattcaacacccactttttcaattcccaacacgccacgtcattttctctctctt-attcaacactcattcaacttttactctctccaatg 26632143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 31129613 - 31129502
Alignment:
Q  174 gaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccat 273  Q
    |||||| |||||| || |||  |||| ||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||    
T  31129613 gaccatgtacaattgttaaaatcatttaacaacactcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcgacactcat 31129514  T
Q  274 tcaatttttacc 285  Q
    |||| |||||||    
T  31129513 tcaacttttacc 31129502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 34955751 - 34955655
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  34955751 ttcaacaccattcaacacc-actttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 34955655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 41477168 - 41477265
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||    
T  41477168 ttcaacaccattcaacatccactttttcaattcccaacactccacgtcattttctctctctt-attcaacactcattcaacttttaccatctccaatgg 41477265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 638
Target Start/End: Complemental strand, 26631897 - 26631783
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||| |||| ||||||| |||| |||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26631897 gctaatagaaagataataataagatgaagatagtgaaaaacttggtttttttcctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 26631798  T
Q  624 attacgaattttggt 638  Q
    || | ||||||||||    
T  26631797 atcatgaattttggt 26631783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 31129141 - 31129080
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  31129141 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaatcatgaattttggt 31129080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 38584982 - 38584894
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||| |||||||    
T  38584982 cattcaacaccattcaacacacactttttcaattcccaacactccacgtcattttctctctctt-attcaacactcgttcaacttttacc 38584894  T

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Target: chr8; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 1633150 - 1633048
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattt 634  Q
    |||||| || |||||||||||||||||||  |||        ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1633150 gctaattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatcaaagtctctatttatagagaaa-aaaattacgaattt 1633052  T
Q  635 tggt 638  Q
    ||||    
T  1633051 tggt 1633048  T

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Target: chr8; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 5212294 - 5212372
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  5212294 ccacttttttaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatg 5212372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 295
Target Start/End: Complemental strand, 8610068 - 8609970
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||| | |||||||  ||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||| ||||| ||||||||||||    
T  8610068 attcaacaccattcaacattcactttttcaattcccaacactccatatcattttctctct-tttattcaacactcattcaacttttaccctctccaatgg 8609970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 17741707 - 17741793
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| || ||||||| ||||| |||||||||||    
T  17741707 ttcaacatccactttttcaattcccaagactccacatcattttctctctctt-attcaatactcattcaacttttaccctctccaatg 17741793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 42859862 - 42859929
Alignment:
Q  172 tagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactc 239  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  42859862 tagaccatttacaatggcaaaatatattcaacaaccctcaacactcactttttcaattcccaacactc 42859929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 4625580 - 4625483
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| | |||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||||| ||||| | ||||||||||    
T  4625580 ttcaacaccattcaacactcactttttcaattcccaacactccaaattattttctctctctt-attcaacactcattcaacttttatcatctccaatgg 4625483  T

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Target: chr8; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 535 - 636
Target Start/End: Original strand, 40283944 - 40284046
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaatt 633  Q
    ||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||| ||||| ||||||||| |||||||    
T  40283944 gctaataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaatcacgaatt 40284043  T
Q  634 ttg 636  Q
    |||    
T  40284044 ttg 40284046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 638
Target Start/End: Original strand, 26244969 - 26245070
Alignment:
Q  538 aataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttg 636  Q
    |||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  26244969 aataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaatcacgaattttg 26245068  T
Q  637 gt 638  Q
    ||    
T  26245069 gt 26245070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 26748650 - 26748589
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  26748650 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 26748589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 506 - 638
Target Start/End: Original strand, 41477507 - 41477640
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg-annnnnnnnctgtgtccaaatcaaatgatccaagtct 604  Q
    ||||||||||||||||| | ||||| |||| ||||||| ||||||||| ||| ||||||||| |        ||||||| ||||||||| | ||||||||    
T  41477507 taaaacttcaaaagaaaagttaatagaaagataataataagattaagatagtaaaaaacttggattttttttctgtgtctaaatcaaataaaccaagtct 41477606  T
Q  605 ctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||| ||||||||| | ||||||||||    
T  41477607 ctatttatagataaaaaaaatcatgaattttggt 41477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 29637262 - 29637155
Alignment:
Q  177 catttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca 276  Q
    ||||||||||||| ||| ||||||||||||  | |||| ||| |||||||||| |||||||||||||| ||||||||| |||| ||| ||||| ||||||    
T  29637262 catttacaatggtgaaaaacattcaacaacacttaacatccattttttcaatttccaacactccacataattttctctttctt-atttaacactcattca 29637164  T
Q  277 atttttacc 285  Q
    | |||||||    
T  29637163 acttttacc 29637155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 638
Target Start/End: Original strand, 29732020 - 29732124
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaatt 633  Q
    ||||||||| |||||||||||||||||||  |||        ||||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||    
T  29732020 gctaataataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatcaaagtctctatttgtagagaaaaaaaaatcacgaatt 29732119  T
Q  634 ttggt 638  Q
    |||||    
T  29732120 ttggt 29732124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 624
Target Start/End: Complemental strand, 30470563 - 30470463
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||| |||| ||||||| |||| |||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||    
T  30470563 gctaatagaaagataataataagatgaagatagtgaaaaacttggtttttttcctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 30470464  T
Q  624 a 624  Q
    |    
T  30470463 a 30470463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 30470906 - 30470819
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    ||||||||| | ||||| | ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  30470906 cattcaacaccattcaagatccattttttcaattcccaacactccacgtcattttctctctctt-attcaacactcattcaacttttac 30470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 42860717 - 42860796
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa-tttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||||||    
T  42860717 ccactttttcaattcccaacactccacatcattttctctttctt-attcaacactcattcaacatttaacctctccaatgg 42860796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 13817432 - 13817479
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13817432 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 13817479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 13783877 - 13783815
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa-attacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  13783877 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaatatcacgaattttggt 13783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 38207133 - 38207004
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccaca------tcattttctctctcttaattc 264  Q
    ||||||||| |||||||||||||   |||||| | |||||||||  |||||||||||||||||||||||||||      ||||||||| | |  ||||||    
T  38207133 ttagaccatgtacaatggtaaaaataattcaatatccttcaacattcactttttcaattcccaacactccacattattttcattttcttttttataattc 38207034  T
Q  265 aacacccattcaatttttacctctccaatg 294  Q
    ||||| ||| |||||||||||||| |||||    
T  38207033 aacacacatccaatttttacctcttcaatg 38207004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 42861078 - 42861140
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  42861078 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 42861140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 23353296 - 23353207
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctta 260  Q
    ||||||||||||||||||| |||  || ||||||||  |||||  |||||||||||||| |||||||||||||||  |||||||||||||    
T  23353296 ttagaccatttacaatggtgaaaagcaatcaacaacactcaacgtccactttttcaatttccaacactccacatccctttctctctctta 23353207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 5735290 - 5735369
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||||||||  ||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  5735290 ccactttttcaattttcaatactcgacatcattttctctctctt-attcaacactcattcaatttttaccctctccaatgg 5735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 8449725 - 8449678
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8449725 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 8449678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 18029035 - 18028988
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18029035 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 18028988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 34955024 - 34954977
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34955024 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 34954977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 584 - 706
Target Start/End: Complemental strand, 38204952 - 38204829
Alignment:
Q  584 caaatcaaatgatccaagtctctatttatagagaaaa--aaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttca 681  Q
    ||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||           ||||||||||| | ||||||||||||||| ||    
T  38204952 caaatcaaatgatccaagtctctatttgtagagaaaaaaaaaatcacgaattttggt-aaaaataaaataaaattatttgcaatgaaataattgagtcca 38204854  T
Q  682 tattagtaagaaaataaaaatccaa 706  Q
     |||| |||||| ||||||||||||    
T  38204853 aattattaagaagataaaaatccaa 38204829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 39811147 - 39811049
Alignment:
Q  196 cattcaacaaccttcaacacccactttttc-aattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    ||||||||| | |||||||||||||||||  |||||| | |||||||||||||||| |||||||| ||||||||| ||||||| ||||| ||||||||||    
T  39811147 cattcaacaccattcaacacccactttttttaattcctagcactccacatcattttatctctctt-attcaacactcattcaacttttaccctctccaat 39811049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 5214178 - 5214240
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttata-gagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||    
T  5214178 ctgtgtccaaatcaaatgatccaagtctctatttatatgggaaaaaaaatcatgaattttggt 5214240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 623
Target Start/End: Original strand, 5736403 - 5736449
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  5736403 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 5736449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 13814952 - 13815029
Alignment:
Q  218 actttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||||||  |||| ||||||||||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctctt-attcaacactaattcaacatttaccctctccaatgg 13815029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 30289453 - 30289392
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||||||| | ||||||||||    
T  30289453 ctgtgtccaaatcaaatgaaccaagtcactatttatagacaaaaaaaatcatgaattttggt 30289392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 577 - 636
Target Start/End: Complemental strand, 4625216 - 4625156
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttg 636  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||    
T  4625216 ctgtgtccaaatcaaatgaaccaagtctctatttatagaggaaaaaaaatcatgaattttg 4625156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 7990414 - 7990513
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||||| ||||||||||||| ||| ||||  ||||||||||| | ||||| | |||||| ||||||||| ||||||| ||||| |||||||||||    
T  7990414 cattcaacaacattcaacacccactattttaattttcaacactccacgttattttttttctctt-attcaacactcattcaacttttaccctctccaatg 7990512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 7511970 - 7511884
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctc 257  Q
    |||||||||||||  ||||| ||| ||||||||||||| |||| | | | ||||| |||| |||||||||||||||||||||||||||    
T  7511970 gttagaccatttagtatggttaaaaacattcaacaaccctcaagatc-atttttttaatttccaacactccacatcattttctctctc 7511884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 13497655 - 13497714
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  13497655 tgtccaaattaaatgatccaagtctttatttatagagaaaaaaaaatcacgaattttggt 13497714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 30532528 - 30532457
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 277  Q
    |||||||| || |||||||||||||| ||||||||  ||||||||||||||||| ||||||||  |||||||    
T  30532528 ccttcaacgcctactttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaa 30532457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 36912949 - 36912996
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  36912949 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaa 36912996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 7511451 - 7511405
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  7511451 tgtgtccaaatcaaatgattcaagtctctatttatatagaaaaaaaa 7511405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 17744960 - 17745019
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||| | ||||||||||    
T  17744960 ctgtgtccaaatcaaatgaaccaagtct--atttatagagaaaaaaaatcatgaattttggt 17745019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 30289794 - 30289721
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||| || ||||||| ||||| ||||||||||    
T  30289794 tttttcaattctcaacactctacatcattttctctctctt-attcaatacacattcaacttttaccctctccaat 30289721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 1954939 - 1954873
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctat----ttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||    |||||||| ||||||||| ||||||||||||    
T  1954939 ctgtgtccaaatcaaatgatccaagtctctatttatttatagagaaaaaaaaatcacgaattttggt 1954873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 31866670 - 31866634
Alignment:
Q  137 aaaagtgatttggatgtgaaatgaatatctttggtta 173  Q
    |||||||||||||||||||||||||||||||||||||    
T  31866670 aaaagtgatttggatgtgaaatgaatatctttggtta 31866634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 579 - 638
Target Start/End: Complemental strand, 30529333 - 30529274
Alignment:
Q  579 gtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||| ||||||||||||| | ||| |||||||||||| | ||||||||||||    
T  30529333 gtgtccaaatcagatgatccaagtctttgtttgtagagaaaaaaattcacgaattttggt 30529274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 43617918 - 43617871
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||    
T  43617918 ctgtgtccaaatcaaaagaaccaaatctctatttatagagaaaaaaaa 43617871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 44503648 - 44503695
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  44503648 ctgtgtccaaatcaaataatccaattctctatttgtagagaaaaaaaa 44503695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 636
Target Start/End: Complemental strand, 8607961 - 8607903
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttg 636  Q
    |||||||||||||||||| |||| | |||||||||||| ||||||||| | ||||||||    
T  8607961 tgtgtccaaatcaaatgaaccaaatatctatttatagacaaaaaaaatcatgaattttg 8607903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 23550123 - 23550185
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||| ||||||||||||| |||| | |||||||| | ||||||||||    
T  23550123 ctgtgtccaaatcaaatgattcaagtctctatttgtagagggaaaaaaatcatgaattttggt 23550185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 35101777 - 35101839
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||  |||||||||||||||||||| | |||||| | ||||||||||    
T  35101777 ctgtgtccaaatcaaatgaatcaagtctctatttatagagagagaaaaatcatgaattttggt 35101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 39810746 - 39810700
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||    
T  39810746 tgtgtccaaatcaaatgaaccaagtctctatctatagacaaaaaaaa 39810700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 567
Target Start/End: Complemental strand, 17494366 - 17494306
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg 567  Q
    |||||||||||||||||| |||||| || | ||||||| ||||||||| |||||||||||||    
T  17494366 taaaacttcaaaagaaag-ctaatagaaggataataataagattaagatagtgaaaaacttg 17494306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 26749484 - 26749408
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||| || || ||||||||  ||||||| |||||||    
T  26749484 ttcaacacccatttttttaattctcaacactccatatcattttctccct-tttattcaacattcattcaacttttacc 26749408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 651 - 708
Target Start/End: Original strand, 44503726 - 44503783
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  44503726 aaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 44503783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 24431951 - 24431891
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctct 256  Q
    ||||||||| | ||||||| ||||||||||||||  |||||||||| |||| |||||||||    
T  24431951 cattcaacatcattcaacatccactttttcaattttcaacactccaaatcactttctctct 24431891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 708
Target Start/End: Original strand, 26245101 - 26245145
Alignment:
Q  664 atgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  26245101 atgaaataattgagtccaaattattaagaaaataaaaatccaagc 26245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 708
Target Start/End: Original strand, 40284078 - 40284122
Alignment:
Q  664 atgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  40284078 atgaaataattgagtccaaattattaagaaaataaaaatccaagc 40284122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 708
Target Start/End: Complemental strand, 43523867 - 43523823
Alignment:
Q  664 atgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  43523867 atgaaataattgagtccaaattattaagaaaataaaaatccaagc 43523823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 610
Target Start/End: Original strand, 13947800 - 13947875
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctattt 610  Q
    ||||||||| ||||||||||||||||||  |||         |||||||||||| |||||||||||||||||||||    
T  13947800 gctaataataagattaagagagtgaaaattttggttttttttctgtgtccaaatgaaatgatccaagtctctattt 13947875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 26414590 - 26414637
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  26414590 ctgtgtccaaatcaaattaaacaagtctctatttatagaggaaaaaaa 26414637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 708
Target Start/End: Original strand, 44150342 - 44150400
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| |||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  44150342 taaaataatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 44150400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 9e-63; HSPs: 115)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 6290561 - 6290683
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6290561 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 6290660  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  6290661 ttcaatttttacctctccaatgg 6290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 496 - 754
Target Start/End: Original strand, 8995055 - 8995320
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||        |||||||||||||||||||    
T  8995055 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 8995154  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt------nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagt 688  Q
    ||||||||||||||||||||| ||||||||||||||||||||||                  |||||||||| | ||||||||||||||| || |||| |    
T  8995155 tccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaaaataaaaaaaaaaattatttgcaatgaaataattgagtccaaattatt 8995254  T
Q  689 aagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    ||||| |||||||||||||| | ||| | ||||| |||||||| ||||||||||||||||||||||    
T  8995255 aagaagataaaaatccaagcagccaatcacataatgccatgtgtcttgctttatccatttcctctc 8995320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 34199380 - 34199259
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34199380 agaccatttacaatggtaaaatacattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 34199281  T
Q  273 ttcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||    
T  34199280 ttcaatttttacctctccaatg 34199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 8991742 - 8991866
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8991742 ttagaccatttacaatggtaatatacattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacacc 8991841  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  8991842 cattcaatttttacctctccaatgg 8991866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 496 - 754
Target Start/End: Complemental strand, 3530029 - 3529765
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||         ||||||||||||||||||    
T  3530029 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 3529930  T
Q  595 atccaagtctctatttatagag-aaaaaaaattacgaattttggt----nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagta 689  Q
    |||||||||||||||||||||| ||||||||||||||||||||||                |||||||||| | ||||||||||||||| || |||| ||    
T  3529929 atccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaataaaataaaaaattatttgcaatgaaataattgagtccaaattatta 3529830  T
Q  690 agaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    |||| |||||||||||||| | ||| | ||||| |||||||| ||||||||||||||||||||||    
T  3529829 agaagataaaaatccaagcagccaatcacataatgccatgtgtcttgctttatccatttcctctc 3529765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 3618566 - 3618442
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3618566 ttagaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 3618467  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    | |||||||||||||||||||||||    
T  3618466 ctttcaatttttacctctccaatgg 3618442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 40720994 - 40721118
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40720994 ttagaccatttataatggtaaaatacattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 40721093  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  40721094 cattcaatttttacctctccaatgg 40721118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 3533418 - 3533296
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3533418 agaccatttacaatggtaacaaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 3533319  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  3533318 ttcaatttttacctctccaatgg 3533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 496 - 754
Target Start/End: Original strand, 40721312 - 40721571
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||         ||||||||||||||||||    
T  40721312 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgatttttttt-tgtgtccaaatcaaatga 40721410  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt-nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaa 693  Q
    || |||| ||||||||||||| |||||||||||||||||||| |             |||||||||| | ||||||||||||||| || |||| ||||||    
T  40721411 tcaaagtatctatttatagagaaaaaaaaattacgaattttgataaaaaaaaataaaaaaattatttgcaatgaaataattgagtccaaattattaagaa 40721510  T
Q  694 aataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
     |||||||||||||| | ||| | ||||| |||||||| ||| ||||||||||||||||||    
T  40721511 gataaaaatccaagcagccaatcacataatgccatgtgtcttcctttatccatttcctctc 40721571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 485 - 638
Target Start/End: Original strand, 16021130 - 16021284
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtcc 584  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||        ||||||||    
T  16021130 tgcaatacactaaataaacactaaaacttcaaaagaaaggctaatacaaatctaataataagattaagagagtgaaaaacttgattttttttctgtgtcc 16021229  T
Q  585 aaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  16021230 aaatcaaatgatccaagtctctatttatagagaaaaaaaaattacaaattttggt 16021284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 496 - 636
Target Start/End: Complemental strand, 34463309 - 34463168
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||| |    
T  34463309 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaataa 34463210  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttg 636  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  34463209 tccaagtctctatttatagagaaaaaaaaattacgaattttg 34463168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 23540537 - 23540416
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||| |||||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23540537 agactatttacaatggttaaacatattcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacaccca 23540438  T
Q  273 ttcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||    
T  23540437 ttcaatttttacctctccaatg 23540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 55549823 - 55549679
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||| |    
T  55549823 aaataaacactaaaacttcaaaagaaaggttaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatta 55549724  T
Q  596 tccaagtctctatttatagag--aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  55549723 tccaagtctctatttatagagaaaaaaaaaattacgaattttggt 55549679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 28899291 - 28899415
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  28899291 ttagaccatttacaatggttaaacacattcaacaaccctcaacacccactttttcaattcccaatattccacatcgttttctctctcttaattcaacacc 28899390  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||| |||||    
T  28899391 cattcaatttttacctctctaatgg 28899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 55560590 - 55560468
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||  |||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55560590 agaccatttacaatgccaaaatatattcaacaactctcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccta 55560491  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  55560490 ttcaatttttacctctccaatgg 55560468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 38173517 - 38173638
Alignment:
Q  174 gaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccat 273  Q
    |||||||||||||||| | | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38173517 gaccatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcat 38173616  T
Q  274 tcaatttttacctctccaatgg 295  Q
     |||||||||||||||||||||    
T  38173617 ccaatttttacctctccaatgg 38173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 48506719 - 48506595
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||     
T  48506719 ttagaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacatcattttctctctcttaattcaacact 48506620  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    ||||||||||||| |||||||||||    
T  48506619 cattcaatttttaactctccaatgg 48506595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 16020832 - 16020930
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16020832 attcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacctctccaatgg 16020930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 496 - 754
Target Start/End: Complemental strand, 34199029 - 34198763
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||         ||||||||||||||||||    
T  34199029 aaataagcactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 34198930  T
Q  595 atccaagtctctatttataga-gaaaaaaaattacgaattttggt------nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattag 687  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||                  |||||||||| | ||||||||||||||| || ||||     
T  34198929 atccaagtctctattaatagaggaaaaaaaattacgaattttggtaaaaaaaataaataaaaaaaaattatttgcaatgaaataattgagtccaaattat 34198830  T
Q  688 taagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    |||||| |||||||||||||| | ||| | ||||| | ||| || ||| ||||||||||||||||||    
T  34198829 taagaagataaaaatccaagcagccaatcacataatgacatctgtcttcctttatccatttcctctc 34198763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 45081523 - 45081401
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||| ||||||  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  45081523 agaccatgtacaatgggaaaatattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactca 45081424  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  45081423 ttcaatttttacctctccaatgg 45081401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 13110520 - 13110644
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||| | | | ||||||||||  | ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13110520 ttagaccatttacaatggtcacaaatattcaacaacgcttaacacccactttttcaattcccaacactccacaacattttttctctcttaattcaacacc 13110619  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  13110620 cattcaatttttacctctccaatgg 13110644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 46917587 - 46917500
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46917587 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 46917500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 13113833 - 13113975
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| ||||||        |||||||||||||||||||    
T  13113833 aaataaacactaaaacttcaaaagaaagactaatacaaagctaataataatattaagagagtgaaatacttga-tttttttctgtgtccaaatcaaatga 13113931  T
Q  596 tccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  13113932 tccaagtctctatttatagagagaaaaaaattacaaattttggt 13113975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 16175128 - 16175006
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| ||||||| ||||| | |||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  16175128 ttagaccatgtacaatgctaaaacaaattcaacaaccttcaacacccattttttcaattttcaacactccacatcattttctcactcttaattcaacacc 16175029  T
Q  271 cattcaatttttacctctccaat 293  Q
    | |||||||||||||||||||||    
T  16175028 ctttcaatttttacctctccaat 16175006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 33077983 - 33077863
Alignment:
Q  174 gaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccat 273  Q
    |||||||||||||||||||| | ||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  33077983 gaccatttacaatggtaaaacaaattcaacaaccctcaatatccactttttcaatttccaacactccacatcattttctctct-ttaatttaacacccat 33077885  T
Q  274 tcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||    
T  33077884 tcaatttttacctctccaatgg 33077863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 56053978 - 56054098
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| ||| | ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  56053978 agaccatttacaatggttaaacatattcaacaacccttaacatccactttttcaattcccaacactccacatcattttctctctcttaattctacaccca 56054077  T
Q  273 ttcaatttttacctctccaatg 294  Q
    |||||||||| |||||||||||    
T  56054078 ttcaattttt-cctctccaatg 56054098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 33604616 - 33604740
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||| ||  || |  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  33604616 ttagaccatttacaatagttgaaaattttcaataaccctcaacacccactttttcaattcccaacactccacatcattttctctatcttaattcaacact 33604715  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  33604716 cattcaatttttacctctccaatgg 33604740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 496 - 632
Target Start/End: Original strand, 52773191 - 52773329
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||    
T  52773191 aaataaacactaaaacttcaaaagaaatgctaatacaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 52773290  T
Q  595 atccaagtctctatttatagag-aaaaaaaattacgaat 632  Q
    || |||||||||||||||| || ||||||||||||||||    
T  52773291 attcaagtctctatttatacagaaaaaaaaattacgaat 52773329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 13094501 - 13094381
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||| |||| |  ||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13094501 agaccatgtacaatgggaaaaaattttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctcataattcaacaccca 13094402  T
Q  273 ttcaatttttacctctccaat 293  Q
    ||||||||||| |||||||||    
T  13094401 ttcaatttttatctctccaat 13094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 2215358 - 2215271
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2215358 ttcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacctctccaatgg 2215271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 52017308 - 52017427
Alignment:
Q  176 ccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattc 275  Q
    |||||||||||||| | | | ||||||||||| | |||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  52017308 ccatttacaatggtcacaaatattcaacaacccttaacacctactttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattc 52017407  T
Q  276 aatttttacctctccaatgg 295  Q
    ||||||||||||||||||||    
T  52017408 aatttttacctctccaatgg 52017427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 35809122 - 35809244
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |||||| | |||| |  ||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  35809122 ttagaccatgtacaatagaaaaaaaatttcaatacccttcaacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacc 35809221  T
Q  271 cattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||    
T  35809222 cattcaatttttacctctccaat 35809244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 4981473 - 4981590
Alignment:
Q  176 ccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattc 275  Q
    |||| |||||||| |||| |  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||     
T  4981473 ccatgtacaatgggaaaaaaatttcaatatccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacacctattt 4981572  T
Q  276 aatttttacctctccaat 293  Q
    ||||||||||||||||||    
T  4981573 aatttttacctctccaat 4981590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 28901416 - 28901560
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaat 593  Q
    ||||||| |||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||           |||||||||||||||||    
T  28901416 aaataaagactaaaacttcaaaagaaaaactaatagaaagctaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaat 28901515  T
Q  594 gatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  28901516 gatccaagtctctatttatagagagaaaaaatcacgaattttggt 28901560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 173 - 292
Target Start/End: Complemental strand, 31336465 - 31336346
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||| |||||| ||| | ||||||||||| |||| ||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||     
T  31336465 agaccatttataatggttaaacatattcaacaaccctcaatacctattttttcaattctcaacactccacgtcattttctctctcttaattcaacaccct 31336366  T
Q  273 ttcaatttttacctctccaa 292  Q
    ||||||||||||||||||||    
T  31336365 ttcaatttttacctctccaa 31336346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 525 - 708
Target Start/End: Complemental strand, 33077599 - 33077422
Alignment:
Q  525 ctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaa-aa 623  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||||| |||||||||||||||| ||    
T  33077599 ctaatacaaagctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctttatttatagagaaaaagaa 33077500  T
Q  624 attacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||||||||            |||||||||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  33077499 attacgaattttggtaaaaa-------aaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 33077422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 485 - 638
Target Start/End: Original strand, 38173841 - 38173982
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtcc 584  Q
    |||||||||||||||||| |||||||||||||||||||           |||||||||| ||||||||||||||||||||||||        ||||||||    
T  38173841 tgcaatacaacaaataaagactaaaacttcaaaagaaa-----------agctaataataagattaagagagtgaaaaacttgattttttttctgtgtcc 38173929  T
Q  585 aaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38173930 aaatcaaatgatccaagtctctatttataga-aaaaaaaattacgaattttggt 38173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 33523229 - 33523353
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||  || |  ||||| |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  33523229 ttagaccatttacaatggttgaaaattttcaataaccctcaacatccactttttcaattcccaacattccacatcattttctctctcttaattcaacatc 33523328  T
Q  271 cattcaa-tttttacctctccaatg 294  Q
    ||||||| |||||| ||||||||||    
T  33523329 cattcaattttttatctctccaatg 33523353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 23539442 - 23539300
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaactt-gannnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |         |||||| ||||||||||     
T  23539442 aaataaagactaaaacttcaaaagaaaagctaatagaaagctaataataagattaagagagtgaaaaacttggtttttttttctgtgttcaaatcaaata 23539343  T
Q  595 atccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  23539342 atccaagtctctatttatagag-aaaaaaattacaaattttggt 23539300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 285
Target Start/End: Complemental strand, 39113869 - 39113755
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    |||||||||||||||||||| ||| ||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  39113869 gttagaccatttacaatggtgaaaaacattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctct-tttattcaacac 39113771  T
Q  270 ccattcaatttttacc 285  Q
     ||||||| |||||||    
T  39113770 tcattcaacttttacc 39113755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 19272743 - 19272864
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||| |||| |  ||||| | |||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  19272743 ttagaccatttacaatggaaaaaaat-ttcaatacccttcaacatttactttttcaattcccaacactccacatcattttctctctcataattcaacatc 19272841  T
Q  271 cattcaatttttacctctccaat 293  Q
    ||||||||||||| |||||||||    
T  19272842 cattcaatttttatctctccaat 19272864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 56054554 - 56054692
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| |||||||||||||||||||    |||| |||||||||||| |||||||||||||||||||||||         |||||||||||||||||||    
T  56054554 aaataaaaactaaaacttcaaaagaaa----aatagaaagctaataataagattaagagagtgaaaaacttg-gtttttttctgtgtccaaatcaaatga 56054648  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||    
T  56054649 tccaagtctctatttatagagaaaaaaaaatcacgaattttggt 56054692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 48403978 - 48403890
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  48403978 ccttcaacattcactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 48403890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 52772715 - 52772834
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| ||||||||||||  | ||||||||||||| |||||||| |||||||||||  |||||||||||| ||||||||||| ||||||||||||||     
T  52772715 agaccatgtacaatggtaaaccaaattcaacaacctttaacacccattttttcaattct-aacactccacattattttctctcttttaattcaacaccct 52772813  T
Q  273 ttcaatttttacctctccaat 293  Q
    ||||||||||| |||||||||    
T  52772814 ttcaatttttatctctccaat 52772834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 18469479 - 18469356
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttct-ctctcttaattcaacaccc 271  Q
    ||||||| | ||||||||||| | | | || | |||||||| | |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||    
T  18469479 agaccatgtccaatggtaaaaaaaaattaatacccttcaactctcactttttcaattcccaacactccacatcatttttttctctcttaattcaacatcc 18469380  T
Q  272 attcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||    
T  18469379 attcaatttttacctctccaatgg 18469356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 31336305 - 31336161
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn---ctgtgtccaaatcaaa 592  Q
    ||||||| |||||||||||||||||||  |||||| |||||||||| | |||||||||||||||||||||||            ||||||||||||||||    
T  31336305 aaataaagactaaaacttcaaaagaaaaactaatagaaagctaatactaagattaagagagtgaaaaacttggtttttttttttctgtgtccaaatcaaa 31336206  T
Q  593 tgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  31336205 tgatccaagtctctatttatagagaaa-aaaatcacgaattttggt 31336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 23390030 - 23389918
Alignment:
Q  183 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 282  Q
    ||||||||||| | ||| || | | |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| || ||||||||| ||    
T  23390030 caatggtaaaaaaaatttaatacctttcaacactcactttttcaattcccaacactccacattattttctctctcataattcaatactcattcaattgtt 23389931  T
Q  283 acctctccaatgg 295  Q
    |||||||||||||    
T  23389930 acctctccaatgg 23389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 34464099 - 34464014
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    ||||||||| ||||||| |||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34464099 ttcaacaccaacttttttaatttccaacatttcacatcattttctctctcttaattcaacaccctttcaatttttacctctccaat 34464014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 535 - 638
Target Start/End: Original strand, 35809729 - 35809832
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattt 634  Q
    ||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  35809729 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaatcacgaattt 35809828  T
Q  635 tggt 638  Q
    ||||    
T  35809829 tggt 35809832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 503 - 623
Target Start/End: Complemental strand, 48506359 - 48506238
Alignment:
Q  503 cactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaag 601  Q
    ||||||||||| |||| ||| ||||||| |||| ||||||| | |||||||||||||||||||||          |||||||||||||||||||||||||    
T  48506359 cactaaaactttaaaataaaagctaatagaaagataataataatattaagagagtgaaaaacttggtttttttttctgtgtccaaatcaaatgatccaag 48506260  T
Q  602 tctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||||||    
T  48506259 tctctatttatagagaaaaaaa 48506238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 17330025 - 17329901
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |  |||||||||| |  ||||| | ||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| |    
T  17330025 ttagaccatcttaaatggtaaaaaaatttcaatacccttcaacatccactttttcaattcc-aacattccacatcattttctctctcataattcaacatc 17329927  T
Q  271 cattcaat-ttttacctctccaatgg 295  Q
     ||||||| ||||||||| |||||||    
T  17329926 tattcaattttttacctccccaatgg 17329901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 21654541 - 21654480
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  21654541 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaatcatgaattttggt 21654480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 27863711 - 27863796
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    ||||||||| | ||||||||||| ||||||||||| ||||||||||| |  |||||||||| ||||||||||||||||||||||||    
T  27863711 ttcaacacctattttttcaattctcaacactccacgtcattttctctgttataattcaacatccattcaatttttacctctccaat 27863796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 54356972 - 54356897
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||    
T  54356972 ttcaacatccactttttcaattcccaacactccacatcattttctttctctt-attcaacacacattcaacttttac 54356897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 47750312 - 47750215
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||| | ||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  47750312 cattcaacaccattcaacatccactttttcaattccc-acactccacgtcattttctctctctt-attcaacactcattcaacttttaccctctccaatg 47750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 3614938 - 3614876
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  3614938 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 3614876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 638
Target Start/End: Original strand, 19273256 - 19273357
Alignment:
Q  538 aataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttg 636  Q
    |||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  19273256 aataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaatcacgaattttg 19273355  T
Q  637 gt 638  Q
    ||    
T  19273356 gt 19273357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 23389661 - 23389600
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  23389661 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatcacaaattttggt 23389600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 45081167 - 45081107
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  45081167 ctgtgtccaaatcaaatgatcaaagtctctatttatagagaaa-aaaattacgaattttggt 45081107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 577 - 705
Target Start/End: Complemental strand, 16171581 - 16171457
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattg 675  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||            |||||||||| | ||||||||||||    
T  16171581 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaattttggtgaaaaaa-----aaaattatttgcaatgaaataattg 16171487  T
Q  676 agttcatattagtaagaaaataaaaatcca 705  Q
    ||| || |||| |||||| |||||||||||    
T  16171486 agtccaaattattaagaagataaaaatcca 16171457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 635
Target Start/End: Original strand, 36658769 - 36658881
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaa 622  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||         ||||||||||||||||||| |||| |||||||||||||||||||||    
T  36658769 gctaatagaaagataataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgaaccaaatctctatttatagagaaaaaa 36658868  T
Q  623 aattacgaatttt 635  Q
    ||||| |||||||    
T  36658869 aattatgaatttt 36658881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 624
Target Start/End: Complemental strand, 40596506 - 40596406
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||| |||| ||||||| |||| |||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||    
T  40596506 gctaatagaaagataataataagatgaagatagtgaaaaacttggtttttttcctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 40596407  T
Q  624 a 624  Q
    |    
T  40596406 a 40596406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 578 - 708
Target Start/End: Complemental strand, 48403594 - 48403464
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttat--agagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattg 675  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||            |||||||||| | ||||||||||||    
T  48403594 tgtgtccaaatcaaatgattcaagtctctatttataaagagaaaaaaaatcacgaattttggtaaaaaaataa--aaaattatttgctatgaaataattg 48403497  T
Q  676 agttcatattagtaagaaaataaaaatccaagc 708  Q
    ||| || |||| |||||| ||||||||||||||    
T  48403496 agtccaaattattaagaagataaaaatccaagc 48403464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 53184164 - 53184085
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||| | ||||||||||||    
T  53184164 ccactttttcaattcccaacacttcacatcattttctctctctt-attcaacactcattcaactttaaccctctccaatgg 53184085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 12158134 - 12158208
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 283  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  12158134 ttcaacatccacattttcgattcccaacactccacatcattttctctctctt-attcaacactcattcaactttta 12158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 540 - 638
Target Start/End: Original strand, 33607351 - 33607450
Alignment:
Q  540 taatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    |||| ||||||||| |||||||||||||         ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  33607351 taataagattaagatagtgaaaaacttgtttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagagagaaaaaaatcacgaattttggt 33607450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 31848491 - 31848445
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31848491 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 31848445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 624
Target Start/End: Complemental strand, 39048813 - 39048695
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    |||||||||||||||||  |||||| |||  |||| || ||||||||| |||||||||||||         |||| |||||||||||||| |||||||||    
T  39048813 taaaacttcaaaagaaaatctaataaaaatataatgataagattaagatagtgaaaaacttggttttttttctgtatccaaatcaaatgaaccaagtctc 39048714  T
Q  606 tatttatagagaaaaaaaa 624  Q
    |||||||||| ||||||||    
T  39048713 tatttatagacaaaaaaaa 39048695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 28447561 - 28447669
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaattacg 629  Q
    |||||||||||  |||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||||||||| |||||||| ||     
T  28447561 aaagctaataaaaagattaagagagtgaaaaacttggtgtttttttctgtgtccaaatcaaatgattcaagtctctatttatagagagaaaaaaatcaca 28447660  T
Q  630 aattttggt 638  Q
    |||||||||    
T  28447661 aattttggt 28447669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 31848838 - 31848763
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  31848838 tttttcaatttccaacactccacatcattttctctctctt-attcaacactcattcaacatttaccctctccaatgg 31848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 2212035 - 2211988
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2212035 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 2211988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 10089844 - 10089929
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||| ||||||| ||||| |||||||||||    
T  10089844 ttcaacacccactttttcaattttcaatactccacatcatttt-tctctctt-attcaacactcattcaacttttaccctctccaatg 10089929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 27142362 - 27142319
Alignment:
Q  252 tctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27142362 tctctcttaattcaacacccattcaatttttacctctccaatgg 27142319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 46914229 - 46914182
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46914229 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 46914182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 55408644 - 55408570
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    ||||||| |||||||||  |||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  55408644 tcaacactcactttttctcttcccagcactccacatcattttctctctctt-attcaacactcattcaacttttac 55408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 13093896 - 13093795
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattt 634  Q
    ||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||    
T  13093896 gctaataataagattaagagagtgaaaaatttgattttttt-ctgtgtccaaatcaaatgatccaaatttctatttgtagagaaa-aaaatcacgaattt 13093799  T
Q  635 tggt 638  Q
    ||||    
T  13093798 tggt 13093795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 579 - 638
Target Start/End: Complemental strand, 17329591 - 17329530
Alignment:
Q  579 gtgtccaaatcaaatgatccaagtctctatt--tatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||||    
T  17329591 gtgtccaaatcaaatgatccaagtctctatttgtagagagaaaaaaaatcacgaattttggt 17329530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 535 - 638
Target Start/End: Original strand, 27864243 - 27864348
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatt--tatagagaaaaaaaattacgaat 632  Q
    ||||||||| ||||||||||||||||||| ||||         ||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||    
T  27864243 gctaataataagattaagagagtgaaaaatttgattttttttgtgtgtccaaatcaaatgatccaagtttctatttgtagagagagaaaaaatcacgaat 27864342  T
Q  633 tttggt 638  Q
    ||||||    
T  27864343 tttggt 27864348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 53181171 - 53181109
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||    
T  53181171 ctgtgtccaaatcaaatgatcaaagtctctatttatagaggaaaaaaaatcatgaattttggt 53181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 39049159 - 39049083
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||| |||| ||||||||  ||||||| |||||||    
T  39049159 ttcaacatccacttttttaatttccaacactccacatcattttctctttctt-attcaacattcattcaacttttacc 39049083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 19409809 - 19409925
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnct-gtgtccaaatcaaatgatccaagtctctatttatagaga-aaaa 621  Q
    ||||||| |||| ||||||| ||||||||| ||||||||||||||         | ||||||||||||||||| |||||||||||||| |||||| | ||    
T  19409809 gctaatagaaagataataataagattaagatagtgaaaaacttgatttttttttttgtgtccaaatcaaatgaaccaagtctctatttctagagagagaa 19409908  T
Q  622 aaattacgaattttggt 638  Q
    |||| ||||||||||||    
T  19409909 aaatcacgaattttggt 19409925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 578 - 638
Target Start/End: Complemental strand, 34434234 - 34434174
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| || || |||||||||    
T  34434234 tgtgtccaaatcaaatgatcaaagtctctatttgtagagaaaaaatatcacaaattttggt 34434174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 7401561 - 7401608
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  7401561 ctgtgtccaaatcaaatgaaccaagtctcaatttatagagaaaaaaaa 7401608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 18469043 - 18468996
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||    
T  18469043 ctgtgtccaaatcaaatgatccaagtctctattagtagagaaaaaaaa 18468996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 55634 - 55589
Alignment:
Q  579 gtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  55634 gtgtccaaatcaaatgaaccaagtctctatttatagacaaaaaaaa 55589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 485 - 530
Target Start/End: Original strand, 52018005 - 52018050
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaata 530  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  52018005 tgcaatacaacaaataaagactaaaacttcaaaagaaaagctaata 52018050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 56003 - 55939
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctta 260  Q
    ||||||||| | || ||||| ||||||||||||| |||||||||| ||||||||||| |||||||    
T  56003 cattcaacaccattgaacactcactttttcaatttccaacactccgcatcattttctttctctta 55939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 19409127 - 19409179
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctctta 260  Q
    |||||||||||||||||||||| |||| |||| |||| |||||||||||||||    
T  19409127 ttcaacacccactttttcaatttccaaaactcaacattattttctctctctta 19409179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 27141900 - 27141852
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctct-atttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  27141900 ctgtgtccaaatcaaatgaaccaagtctctaatttatagagaaaaaaaa 27141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 39533356 - 39533281
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||||||||||||||| |||| | ||||| ||||||||||| |||| ||||||||  ||||||| |||||||    
T  39533356 tcaacacccactttttcaatttccaatattccacgtcattttctctttctt-attcaacattcattcaacttttacc 39533281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 47749767 - 47749704
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| |||||||||||||||| |||  ||||||||| | ||||||||||    
T  47749767 ctgtgtccaaatcaaatgaaccaagtctctatttatggaggaaaaaaaaatcatgaattttggt 47749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 595 - 638
Target Start/End: Original strand, 52018051 - 52018095
Alignment:
Q  595 atccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  52018051 atccaagtctctatttatagagaaaaaaaaattacgaattttggt 52018095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 53348134 - 53348050
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    |||| ||||||||||||||  ||||| | |||||||||||||||||||| ||||||||  |||| || ||||| |||||||||||    
T  53348134 aacatccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctccaatg 53348050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 636
Target Start/End: Complemental strand, 55408256 - 55408196
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttg 636  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||    
T  55408256 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttg 55408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 21047634 - 21047587
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  21047634 ctgtgtccaaatcaaatgaaccaaatctctatttatagacaaaaaaaa 21047587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 651 - 714
Target Start/End: Original strand, 38173999 - 38174062
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagctgtcaa 714  Q
    |||||||||| | ||||||||||||||| || |||| |||||| |||||||||||||| |||||    
T  38173999 aaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagtcaa 38174062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 53347421 - 53347318
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaat 632  Q
    ||||||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| |  | ||||||| | ||||||    
T  53347421 gctaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttgt--acaaaaaaattcacgaat 53347324  T
Q  633 tttggt 638  Q
    ||||||    
T  53347323 tttggt 53347318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 582 - 624
Target Start/End: Original strand, 12159129 - 12159171
Alignment:
Q  582 tccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  12159129 tccaaatcaaatgaaccaagtctctatttatagagagaaaaaa 12159171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 33526713 - 33526798
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    ||||||| ||||||||||||||| |||||||||  |||||||||| ||| || |||||| || ||||||| ||||| ||||||||||    
T  33526713 ttcaacatccactttttcaattctcaacactccgtatcattttctttct-tttattcaatactcattcaacttttaccctctccaat 33526798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 582 - 624
Target Start/End: Original strand, 33527082 - 33527124
Alignment:
Q  582 tccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  33527082 tccaaatcaaatgaaccaagtctctatttatagacaaaaaaaa 33527124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 36656557 - 36656629
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||| || |||||||||||   |||||||||||||||||||||||||||| |||| || ||||||| ||||||    
T  36656557 ttcaacactcattttttcaattc---acactccacatcattttctctctcttaa-tcaatactcattcaacttttac 36656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 39113469 - 39113423
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||    
T  39113469 tgtgtccaaatcaaatgaaccaagtctatatttatagacaaaaaaaa 39113423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 708
Target Start/End: Original strand, 19273377 - 19273430
Alignment:
Q  655 ttatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | ||||||||||||||| || |||| |||||||||||||||||||||    
T  19273377 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagc 19273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 624
Target Start/End: Original strand, 10090138 - 10090182
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||    
T  10090138 tgtccaaatcaaatgaaccaagtctctatttgtagagagaaaaaa 10090182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 35394899 - 35394951
Alignment:
Q  195 acattcaacaaccttcaacacccactttttcaattcccaacactccacatcat 247  Q
    |||||||||| | |||||||| ||| ||||||||| |||||||||||||||||    
T  35394899 acattcaacaccattcaacacacaccttttcaatttccaacactccacatcat 35394951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 708
Target Start/End: Original strand, 35809864 - 35809908
Alignment:
Q  664 atgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  35809864 atgaaataattgagtccaaattattaagaaaataaaaatccaagc 35809908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 40596826 - 40596751
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||||||  ||||||||||| ||||||||||||| || |||||||||  |||||| |||||| |||||||||||    
T  40596826 tttttcaattttcaacactccacgtcattttctctct-tttattcaacacttattcaacttttactctctccaatgg 40596751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 51392227 - 51392275
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctct 256  Q
    |||||||| |||||||| ||||| ||||||||||||||||||| |||||    
T  51392227 ttcaacacacacttttttaattctcaacactccacatcattttttctct 51392275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 543
Target Start/End: Original strand, 28901256 - 28901302
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataat 543  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  28901256 aaataaagactaaaacttcaaaagaaa-gctaatagaaagctaataat 28901302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 623
Target Start/End: Complemental strand, 39532866 - 39532823
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    |||||||||||||||| |||| |||||||||||||| |||||||    
T  39532866 tgtccaaatcaaatgaaccaaatctctatttatagacaaaaaaa 39532823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 39113545 - 39113483
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga 568  Q
    ||||||||||||||||| ||||||| |||| ||||||  ||||||||| | ||||| ||||||    
T  39113545 taaaacttcaaaagaaaagctaatagaaagataataacaagattaagatattgaaacacttga 39113483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Complemental strand, 3614857 - 3614800
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | ||||||||||||||| || | || |||||| ||||||||||||||    
T  3614857 aaaattatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 3614800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Complemental strand, 18468973 - 18468916
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||| |||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  18468973 aaaatcattttcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 18468916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 655 - 708
Target Start/End: Original strand, 27864372 - 27864425
Alignment:
Q  655 ttatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | ||||||||||||||| || |||| ||||||||||||||| |||||    
T  27864372 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagc 27864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 52773130 - 52773167
Alignment:
Q  531 caaagctaataatgagattaagagagtgaaaaacttga 568  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  52773130 caaatctaataataagattaagagagtgaaaaacttga 52773167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 1e-61; HSPs: 89)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 27942449 - 27942573
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27942449 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacacc 27942548  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  27942549 cattcaatttttacctctccaatgg 27942573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 19241276 - 19241398
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19241276 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacaccca 19241375  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  19241376 ttcaatttttacctctccaatgg 19241398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 32976687 - 32976565
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32976687 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 32976588  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  32976587 ttcaatttttacctctccaatgg 32976565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 40888852 - 40888974
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40888852 ttagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 40888951  T
Q  271 cattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||    
T  40888952 cattcaatttttacctctccaat 40888974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 485 - 638
Target Start/End: Complemental strand, 31008184 - 31008030
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtcc 584  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||        ||||||||    
T  31008184 tgcaatacaacaaataaagactaaaacttcaaaagaaaagctaatataaagctaataatgagattaagagagtgaaaaacttgattttttttctgtgtcc 31008085  T
Q  585 aaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31008084 aaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattttggt 31008030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 485 - 754
Target Start/End: Original strand, 19241598 - 19241874
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtcc 584  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||        || |||||    
T  19241598 tgcaatacactaaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttga-tttttttctatgtcc 19241696  T
Q  585 aaatcaaatgatccaagtctctatttatagag--aaaaaaaattacgaattttggt------nnnnnnnnnnntaaaattatttaccatgaaataattga 676  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||                  |||||||||| | |||||||||||||    
T  19241697 aaatcaaatgatccaagtctctatttatagagaaaaaaaaaattacgaattttggtaaaaaaaaataaaaataaaaaattatttgcaatgaaataattga 19241796  T
Q  677 gttcatattagtaagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    || || |||| |||||| |||||||||||||| | ||| | ||||| |||||||| ||| ||||||||||||||||||    
T  19241797 gtccaaattattaagaagataaaaatccaagcagccaatcacataatgccatgtgtcttcctttatccatttcctctc 19241874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 7650961 - 7651085
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7650961 ttagaccatttacaatggtaaaatacattcaacaacctttaacacctattttttcaattcccaacactccacatcattttctctctcttaattcaacacc 7651060  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||| |||||||||| |||||||||    
T  7651061 catttaatttttacccctccaatgg 7651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 23648833 - 23648691
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||        |||||||||||||||||||    
T  23648833 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagggtaaaaaacttgattttttttctgtgtccaaatcaaatga 23648734  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  23648733 tctaagtctctatttatagagaaaaaaaattacgaattttggt 23648691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 23809739 - 23809881
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||        |||||||||||||||||||    
T  23809739 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagggtaaaaaacttgattttttttctgtgtccaaatcaaatga 23809838  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  23809839 tctaagtctctatttatagagaaaaaaaattacgaattttggt 23809881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 31008499 - 31008374
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttc-aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  31008499 ttagaccatttacaatggtaaaatacattcaacaaccttataacacccactttttcaattctcaacacttcacatcattttctctctcttaatttaacac 31008400  T
Q  270 ccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||| ||||||||    
T  31008399 ccattcaatttttacctttccaatgg 31008374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 42317848 - 42317968
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||| | ||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||     
T  42317848 agaccatttacaatggtaaaacaaattcaacaaccttcaacattcactttttcaatttccaacactccatatcattttctctctcttaattcaacaccct 42317947  T
Q  273 ttcaatttttacctctccaat 293  Q
    |||||||||||||||||||||    
T  42317948 ttcaatttttacctctccaat 42317968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 42318185 - 42318328
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||    
T  42318185 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatga 42318284  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |  |||||||||||||||||| ||||||||| ||||||||||||    
T  42318285 tttaagtctctatttatagagaaaaaaaaatcacgaattttggt 42318328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 30648224 - 30648102
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||    
T  30648224 agaccatttacaatggtcacaaacattcaacaaccctcaacacccactttttcaattccctacactccacaccattttatctctcttaattcaacactca 30648125  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  30648124 ttcaatttttacctctccaatgg 30648102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 42807111 - 42806989
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| | | | ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42807111 agaccatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacaccca 42807012  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||| |||| |||||    
T  42807011 ttcaatttttacatctctaatgg 42806989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 25671019 - 25670895
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| ||||||||| | | |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  25671019 ttagaccatgtacaatggttacaaattttcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacact 25670920  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    ||||||||||||| |||||||||||    
T  25670919 cattcaatttttaactctccaatgg 25670895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 27407156 - 27407032
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattc-aacac 269  Q
    ||||||||||||||||||| | | ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27407156 ttagaccatttacaatggtcacaaacattcaacaacctttaacactcactttttcaattcccaacactccacattattttctctctcttaattctaacac 27407057  T
Q  270 ccattcaatttttacctctccaatg 294  Q
     ||||||| ||||||||||||||||    
T  27407056 tcattcaacttttacctctccaatg 27407032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 496 - 618
Target Start/End: Complemental strand, 13592686 - 13592563
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||         ||||||||||||||||||    
T  13592686 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatatgattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 13592587  T
Q  595 atccaagtctctatttatagagaa 618  Q
    ||||||||||||||||||||||||    
T  13592586 atccaagtctctatttatagagaa 13592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 31013920 - 31013833
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31013920 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 31013833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 29619117 - 29619003
Alignment:
Q  181 tacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattt 280  Q
    |||||||| |||| |  ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  29619117 tacaatggcaaaaaaatttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaattt 29619018  T
Q  281 ttacctctccaatgg 295  Q
    |||||||||||||||    
T  29619017 ttacctctccaatgg 29619003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 170 - 295
Target Start/End: Complemental strand, 36572534 - 36572409
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    ||||||||||||| |||||||||  | ||||||||||| ||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36572534 gttagaccatttataatggtaaatcaaattcaacaaccctcaacattcactttttcaatttccaatactccacatcattttctctctcttaattcaacac 36572435  T
Q  270 ccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||  ||||||||||    
T  36572434 ccattcaatttttatttctccaatgg 36572409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 29616262 - 29616112
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-------nnnnnnnnctgtgtccaaat 588  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||               ||||||||||||    
T  29616262 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagggtgaaaaacttgatttttttttttttttctgtgtccaaat 29616163  T
Q  589 caaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  29616162 caaatgatcaaagtctctatttatagagaaaaaaaaattacgaattttggt 29616112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 23089511 - 23089600
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23089511 ccttcaacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaatttttacctctccaatgg 23089600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 13479938 - 13479815
Alignment:
Q  171 ttagaccatttacaatggtaaaataca-ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    ||||||||| |||||||| |||| | | ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  13479938 ttagaccatgtacaatgggaaaaaaaaattcaatacccttcaacacccacttttttaattcccaacactccacatcattttctctctcataattcaacac 13479839  T
Q  270 ccattcaatttttacctctccaat 293  Q
     |||||||||||||| ||||||||    
T  13479838 tcattcaatttttacatctccaat 13479815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 14278789 - 14278911
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| ||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||  ||    
T  14278789 agaccatttacaatggtgaaaaacattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctctt-attcaacattca 14278887  T
Q  273 ttcaattttta-cctctccaatgg 295  Q
    ||||| ||||| ||||||||||||    
T  14278888 ttcaacttttaccctctccaatgg 14278911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 36572172 - 36572030
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnct-gtgtccaaatcaaatg 594  Q
    ||||||| ||||||||||||||||||| | ||||| |||||||||||| | ||||||||||| |||||||||         || ||||||||||||||||    
T  36572172 aaataaagactaaaacttcaaaagaaaagttaatagaaagctaataataa-attaagagagttaaaaacttggttttttttcttgtgtccaaatcaaatg 36572074  T
Q  595 atccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  36572073 atccaagtctctatttatagagaaaaaaaatcacgaattttggt 36572030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 8176392 - 8176292
Alignment:
Q  195 acattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||    
T  8176392 acattcaacatcattcaacacccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaat 8176294  T
Q  294 gg 295  Q
    ||    
T  8176293 gg 8176292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 3454696 - 3454816
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| || ||||| |||| |  ||||| | ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  3454696 agaccatgtataatgggaaaaaaatttcaatacccttcaacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactca 3454795  T
Q  273 ttcaatttttacctctccaatg 294  Q
    ||||||||||| ||||||||||    
T  3454796 ttcaattttta-ctctccaatg 3454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 39008473 - 39008562
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  39008473 ccttcaacatccactttttcaattcccaacactccaaatcgttttctctctcataattcaacatccattcaatttttacatctccaatgg 39008562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 4219519 - 4219434
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  4219519 ccttcaacacccactttttcaattcccaacacttcacatcattttctca----taattcaacacccattcaatttttacctctccaatgg 4219434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 39238375 - 39238494
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||| |||| |  ||||| | |||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  39238375 agaccatgtacaatggaaaaaaat-ttcaatatccttcaacatttactttttcaattcccaacactccacatcattttctctctcataattcaacatcca 39238473  T
Q  273 ttcaatttttacctctccaat 293  Q
    ||||||||||| |||||||||    
T  39238474 ttcaatttttatctctccaat 39238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 532 - 707
Target Start/End: Complemental strand, 42804521 - 42804349
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaa 631  Q
    |||||||| ||| ||||||||||||||||||||||||        |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  42804521 aaagctaacaataagattaagagagtgaaaaacttgattttttt-ctgtgtccaaatcaaatgattcaagtctctatttatagggaaaaaaaattacgaa 42804423  T
Q  632 ttttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaag 707  Q
    |||||||           ||||||||||| | ||||||||||||||| || |||| |||||| |||||||| ||||    
T  42804422 ttttggt--aaaaaaaaataaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaag 42804349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 32363725 - 32363610
Alignment:
Q  174 gaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccat 273  Q
    ||||||||||||||||  || |  || || ||||||||||||||||||||| ||||  ||||||||||||| ||||||||||| ||||||||||||||||    
T  32363725 gaccatttacaatggttgaaaatttttaataaccttcaacacccacttttttaattttcaacactccacattattttctctcttttaattcaacacccat 32363626  T
Q  274 tcaatttttacctctc 289  Q
    | ||||||||||||||    
T  32363625 ttaatttttacctctc 32363610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 4938427 - 4938533
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaa 631  Q
    |||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||||| |||||||||||||||||||| | |||    
T  4938427 aaagctaataataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatccaagtctttatttatagagaaaaaaaatcatgaa 4938526  T
Q  632 ttttggt 638  Q
    |||||||    
T  4938527 ttttggt 4938533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 504 - 623
Target Start/End: Complemental strand, 30644802 - 30644681
Alignment:
Q  504 actaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg--annnnnnnnctgtgtccaaatcaaatgatccaag 601  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||           |||||||||||||||||||||||||    
T  30644802 actaaaacttcaaaagaaaagctaatagaaagctaataataagattaaaagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaag 30644703  T
Q  602 tctctatttatagagaaaaaaa 623  Q
    |||| |||||||||||||||||    
T  30644702 tctcaatttatagagaaaaaaa 30644681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 23649281 - 23649157
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||| |||||  || |  |||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||||||      
T  23649281 ttagaccatttacgatggttgaaaagtttcaacaaccctcaactctcactttttcaattcccaacactccatatcattttctctttcttaattcaacatt 23649182  T
Q  271 cattcaatttttacctctccaatgg 295  Q
     ||| ||||||||||||| ||||||    
T  23649181 tatttaatttttacctcttcaatgg 23649157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 23809290 - 23809414
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||| |||||  || |  |||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||||||      
T  23809290 ttagaccatttacgatggttgaaaagtttcaacaaccctcaactctcactttttcaattcccaacactccatatcattttctctttcttaattcaacatt 23809389  T
Q  271 cattcaatttttacctctccaatgg 295  Q
     ||| ||||||||||||| ||||||    
T  23809390 tatttaatttttacctcttcaatgg 23809414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 37882540 - 37882457
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctct 256  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  37882540 agaccatctacaatggtgaaaaacattcaacaacgttcaacacccattttttcaattcccaacactccacatcattttttctct 37882457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 506 - 624
Target Start/End: Complemental strand, 34529175 - 34529057
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    ||||||||||||||||| ||||||| |||| ||||||  ||||||||| ||||||||||||||         |||||||||||||||||| |||||||||    
T  34529175 taaaacttcaaaagaaaagctaatagaaagataataacaagattaagatagtgaaaaacttgattttttttttgtgtccaaatcaaatgaaccaagtctc 34529076  T
Q  606 tatttatagagaaaaaaaa 624  Q
    |||||||||| ||||||||    
T  34529075 tatttatagacaaaaaaaa 34529057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 578 - 708
Target Start/End: Original strand, 3455210 - 3455338
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgag 677  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||            ||||| |||| | ||||||||||||||    
T  3455210 tgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaattacgaattttggtaaaaaaaata--aaaatcatttgcaatgaaataattgag 3455307  T
Q  678 ttcatattagtaagaaaataaaaatccaagc 708  Q
    | || |||| |||||| ||||||||||||||    
T  3455308 tccaaattattaagaagataaaaatccaagc 3455338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 41263344 - 41263444
Alignment:
Q  195 acattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    |||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||||| ||||||||||    
T  41263344 acattcaacaccattcaacatccactttttcaattcccaacgctccacatcattttctctctctt-attcaacattcattcaacttttaccctctccaat 41263442  T
Q  294 gg 295  Q
    ||    
T  41263443 gg 41263444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 4219150 - 4219046
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaatt 633  Q
    ||||||||| ||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  4219150 gctaataataagattaagagagtgaaaaatttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatcacgaatt 4219051  T
Q  634 ttggt 638  Q
    |||||    
T  4219050 ttggt 4219046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 4577008 - 4577087
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 4577087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 485 - 638
Target Start/End: Original strand, 7651275 - 7651417
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtcc 584  Q
    |||||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||  ||||||  ||||        |||| |||    
T  7651275 tgcaatacaacaaataaagactaaaacttcaaaagaaa-----------agctaataatgagattaagag--tgaaaattttgattttttttctgtatcc 7651361  T
Q  585 aaatcaaatgatccaagtctctatttatagag--aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7651362 aaatcaaatgatccaagtctctatttatagagaaaaaaaaaattacgaattttggt 7651417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 41153095 - 41153005
Alignment:
Q  195 acattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 286  Q
    |||||||||||  ||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  41153095 acattcaacaatattcaacatccattttttcaattctcaacactccacatcattttctctctctt-attcaacactcattcaacttttacct 41153005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 4938145 - 4938267
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| ||| ||||| |||  ||||||||||  |||||||| || ||||||||||| ||| |||| |||||||||||||||||||||||||||||  |    
T  4938145 agaccatctacgatggttaaaatcattcaacaatattcaacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacactaa 4938244  T
Q  273 ttcaattttta-cctctccaatg 294  Q
    ||||| ||||| |||||||||||    
T  4938245 ttcaacttttaccctctccaatg 4938267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 25032348 - 25032424
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  25032348 ttcaacacccaccttttcaatttccaacactccacatcattttctctctctt-attcaacactcattcaacttttacc 25032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 578 - 708
Target Start/End: Complemental strand, 25670498 - 25670369
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgag 677  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||           | ||||||||| | ||||||||||||||    
T  25670498 tgtgtccaaatgaaatgatccaagtctctatttatagagaaaaaaaatcatgaattttggtaaaaaaataaat-aaattatttgctatgaaataattgag 25670400  T
Q  678 ttcatattagtaagaaaataaaaatccaagc 708  Q
    | || |||| |||||| ||||||||||||||    
T  25670399 tccaaattattaagaagataaaaatccaagc 25670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 25652816 - 25652895
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||    
T  25652816 ccactttttcaattcccaacacttcacatcattttctctctctt-attcaacactcattgaatttttaccctctccaatgg 25652895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 34709842 - 34709950
Alignment:
Q  178 atttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 277  Q
    ||||||||||||  || || |||||||| | || | ||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||||||||||| ||    
T  34709842 atttacaatggttcaaaactttcaacaatcctcgatacccactttttcaattttcaacattccacgtcattttttctctcttaattcaacacccatttaa 34709941  T
Q  278 tttttacct 286  Q
    |||||||||    
T  34709942 tttttacct 34709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 638
Target Start/End: Complemental strand, 27405921 - 27405814
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacga 630  Q
    |||||||||||| ||||||||||||||||||| |||         ||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||    
T  27405921 aaagctaataataagattaagagagtgaaaaatttggttttttttctgtgtccaaatcaaatgatttaagtctctatttatagaggaaaaaaaatcacga 27405822  T
Q  631 attttggt 638  Q
    ||||||||    
T  27405821 attttggt 27405814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 577 - 636
Target Start/End: Complemental strand, 32363147 - 32363088
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttg 636  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  32363147 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatcacgaattttg 32363088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 27946002 - 27946064
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  27946002 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcacgaattttggt 27946064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 32973077 - 32973015
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  32973077 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 32973015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 705
Target Start/End: Original strand, 40892173 - 40892301
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataatt 674  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||           ||||||||||| | |||||||||||    
T  40892173 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaaatcacgaattttggt--gaaaaaaaataaaattatttgcaatgaaataatt 40892270  T
Q  675 gagttcatattagtaagaaaataaaaatcca 705  Q
    |||| || | || |||||| |||||||||||    
T  40892271 gagtccaaagtattaagaagataaaaatcca 40892301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 10569878 - 10569799
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||||||| |||||| |||||||||||    
T  10569878 ccactttttcaattcccaacactccacatcattttttgtctctt-attcaacactcattcaacttttactctctccaatgg 10569799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 4580390 - 4580452
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  4580390 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 4580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 31011769 - 31011707
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  31011769 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 31011707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 42608157 - 42608044
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||||| ||  ||||||||||   |||||||||| ||||||||||||| || |||||||||     
T  42608157 ttagaccatctacaatggtgaaaaacattcaacaacattcaacatccgttttttcaattattaacactccacgtcattttctctct-tttattcaacact 42608059  T
Q  271 cattcaatttttacc 285  Q
     |||||| |||||||    
T  42608058 tattcaacttttacc 42608044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 624
Target Start/End: Complemental strand, 41152619 - 41152519
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||| || | ||||||| |||| |||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41152619 gctaatagaaggataataataagatgaagatagtgaaaaacttgtttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 41152520  T
Q  624 a 624  Q
    |    
T  41152519 a 41152519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 25033569 - 25033616
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25033569 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 25033616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 25653205 - 25653252
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25653205 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 25653252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 7827497 - 7827555
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||    
T  7827497 tgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaactttggt 7827555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 13479282 - 13479220
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||    
T  13479282 ctgtgtccaaatcaaatgatccaagtttctatttgtagaggaaaaaaaatcacgaattttggt 13479220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 27407819 - 27407733
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctct-taattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||||||| | ||||||||| ||||||| ||||| ||||||||||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctccaatgg 27407733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 9274525 - 9274458
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 277  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| |||||||    
T  9274525 ttcaacatccactttttcaattcccaacactccacatcatttt-tctctctt-atttaacactcattcaa 9274458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 41263812 - 41263873
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| | ||||||||||    
T  41263812 ctgtgttcaaatcaaatgaaacaagtctctatttatagagaaaaaaaatcatgaattttggt 41263873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 577 - 636
Target Start/End: Original strand, 9958065 - 9958125
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttg 636  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  9958065 ctgtgttcaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcaagaattttg 9958125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 577 - 625
Target Start/End: Original strand, 14279216 - 14279264
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaat 625  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  14279216 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaaaaaat 14279264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 535 - 638
Target Start/End: Original strand, 23089872 - 23089976
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaatt 633  Q
    ||||||||| ||||||||||||||||||  |||         |||||||||||| ||||||||||||||||||||| |||| |||||||||| || ||||    
T  23089872 gctaataataagattaagagagtgaaaattttggttttttttctgtgtccaaattaaatgatccaagtctctatttgtagaggaaaaaaaatcacaaatt 23089971  T
Q  634 ttggt 638  Q
    |||||    
T  23089972 ttggt 23089976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 8176059 - 8176012
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8176059 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaa 8176012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 21368635 - 21368682
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  21368635 ctgtgtccaaatcaaatgaaccaagtttctatttatagagaaaaaaaa 21368682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 638
Target Start/End: Original strand, 39238886 - 39238988
Alignment:
Q  538 aataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatt--tatagagaaaaaaaattacgaatttt 635  Q
    |||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||  || | | ||||||||| |||||||||    
T  39238886 aataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtaaataaaaaaaaaatcacgaatttt 39238985  T
Q  636 ggt 638  Q
    |||    
T  39238986 ggt 39238988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 8681354 - 8681277
Alignment:
Q  218 actttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||  ||||||| ||||| ||||||||||||    
T  8681354 actttttcaatttccaacactccatatcattttctctttctt-attcaacattcattcaacttttaccctctccaatgg 8681277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 624
Target Start/End: Original strand, 12913162 - 12913279
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    ||||||||||||||||| || ||||||| | |||||||  || ||||| ||||||||| |||         ||||||||||||||||||| ||||||||     
T  12913162 taaaacttcaaaagaaaagccaatacaaggataataatttgactaagatagtgaaaaatttg-gtttttttctgtgtccaaatcaaatgaaccaagtctt 12913260  T
Q  606 tatttatagagaaaaaaaa 624  Q
    |||||||||| ||||||||    
T  12913261 tatttatagacaaaaaaaa 12913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 506 - 623
Target Start/End: Complemental strand, 8681076 - 8680962
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    ||||||||||||||||| | ||||| |||| ||||||  ||||||||| |||||||||||||          |||||||||||||||||| ||| ||| |    
T  8681076 taaaacttcaaaagaaaagttaatagaaagataataacaagattaagatagtgaaaaacttg---gtttttttgtgtccaaatcaaatgaaccatgtccc 8680980  T
Q  606 tatttatagagaaaaaaa 623  Q
    |||||||||| |||||||    
T  8680979 tatttatagacaaaaaaa 8680962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 11954772 - 11954846
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 283  Q
    ||||||||| ||||||  ||||  |||||||||||||||||||||||||||| ||||||||  ||||||| |||||    
T  11954772 ttcaacacctacttttctaattatcaacactccacatcattttctctctctt-attcaacattcattcaactttta 11954846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 12912875 - 12912941
Alignment:
Q  218 actttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||| |||||| |||||||||||||||||| |||||||| ||| ||||| ||||||| |||||||    
T  12912875 acttttttaattcctaacactccacatcattttatctctctt-atttaacactcattcaacttttacc 12912941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 34529469 - 34529410
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctct 256  Q
    |||||||||| ||||||||| ||||||| ||||| ||||||  |||||||||||||||||    
T  34529469 attcaacaacattcaacacctacttttttaattctcaacacatcacatcattttctctct 34529410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 15972565 - 15972638
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    |||| |||||||||||||| |||||| || |||| |||||||||||||| ||||||||  ||||||| |||||||    
T  15972565 aacatccactttttcaatttccaacaatcgacattattttctctctctt-attcaacattcattcaacttttacc 15972638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 15972968 - 15973014
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||    
T  15972968 tgtgtccaaatcaaatgaatcaagtctctatttatagacaaaaaaaa 15973014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 34918543 - 34918478
Alignment:
Q  217 cactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||||||| |||||||||||||||||||||| ||   | ||||||||| ||||||| |||||||    
T  34918543 cactttttcaatttccaacactccacatcattttctttc---ttattcaacactcattcaacttttacc 34918478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 37882167 - 37882121
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||    
T  37882167 tgtgtccaaatcaaattaaccaagtctctatttatagataaaaaaaa 37882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 708
Target Start/End: Original strand, 39239009 - 39239062
Alignment:
Q  655 ttatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | ||||||||||||||| || |||| |||||||||||||||||||||    
T  39239009 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagc 39239062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 638
Target Start/End: Original strand, 2300200 - 2300262
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatag--agaaaaaaaattacgaattttggt 638  Q
    |||||| ||||||||||| |||| |||||||||||||  | ||||||||||| ||||||||||    
T  2300200 tgtgtctaaatcaaatgaaccaaatctctatttatagacaaaaaaaaaattatgaattttggt 2300262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 708
Target Start/End: Original strand, 7651436 - 7651494
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||| | || |||||||||||| || |||| |||||| ||||||||||||||    
T  7651436 taaaattatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagc 7651494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 27407535 - 27407473
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga 568  Q
    ||||||||||||||||| | || || |||| ||||||  ||||||||| ||||||||||||||    
T  27407535 taaaacttcaaaagaaaagttattagaaagataataacaagattaagatagtgaaaaacttga 27407473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Original strand, 9958143 - 9958200
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | ||||||||||||||| || |||| |||||| |||||||| |||||    
T  9958143 aaaattatttgctatgaaataattgagtccaaattattaagaagataaaaattcaagc 9958200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 13592747 - 13592710
Alignment:
Q  531 caaagctaataatgagattaagagagtgaaaaacttga 568  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  13592747 caaatctaataataagattaagagagtgaaaaacttga 13592710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 39008890 - 39008951
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||| ||| | | |  ||| ||||||||| ||||||||||||    
T  39008890 ctgtgtccaaatcaaatgatccaaatctatttatggagaaaaaaaaaatcacgaattttggt 39008951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 138)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 50415943 - 50415819
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50415943 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacacc 50415844  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  50415843 cattcaatttttacctctccaatgg 50415819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 29701644 - 29701766
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29701644 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 29701743  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    ||||||||||||| |||||||||    
T  29701744 ttcaatttttacccctccaatgg 29701766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 30418540 - 30418418
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30418540 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 30418441  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  30418440 ttcaatttttacctctccaatgg 30418418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 496 - 754
Target Start/End: Complemental strand, 6045102 - 6044837
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||        |||||||||||||||||||    
T  6045102 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 6045003  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt------nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagt 688  Q
    ||||||||||||||||||||| ||||||||||||||||||||||                  |||||||||| | ||||||||||||||| || |||| |    
T  6045002 tccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaaaaaaaaaaaaaaaattatttgcaatgaaataattgagtccaaattatt 6044903  T
Q  689 aagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    ||||| |||||||||||||| | ||| | ||||| |||||||| ||||||||||||||||||||||    
T  6044902 aagaagataaaaatccaagcagccaatcacataatgccatgtgtcttgctttatccatttcctctc 6044837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 44084269 - 44084391
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44084269 ttagaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 44084368  T
Q  271 cattcaatttttacctctccaat 293  Q
    | |||||||||||||||||||||    
T  44084369 ctttcaatttttacctctccaat 44084391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 51999350 - 51999229
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51999350 ttagaccatttacaatggcaaaatatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 51999251  T
Q  271 cattcaatttttacctctccaa 292  Q
    ||||||||||||| ||||||||    
T  51999250 cattcaatttttatctctccaa 51999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 6048809 - 6048685
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6048809 ttagaccatttacaatggtaactaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 6048710  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  6048709 cattcaatttttacctctccaatgg 6048685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 32120549 - 32120429
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  32120549 agaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccct 32120450  T
Q  273 ttcaatttttacctctccaat 293  Q
    |||||||||||||||||||||    
T  32120449 ttcaatttttacctctccaat 32120429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 496 - 731
Target Start/End: Complemental strand, 10424426 - 10424190
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga--nnnnnnnnctgtgtccaaatcaaat 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||          |||||||||||||||||    
T  10424426 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgattttttttttctgtgtccaaatcaaat 10424327  T
Q  594 gatccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaa 693  Q
     |||||||||||||||||||||||||||||||||||||||||| |           ||||||||||| | ||||||||||||||| || |||| ||||||    
T  10424326 aatccaagtctctatttatagagaaaaaaaattacgaattttgat-aaaaaaaaaataaaattattttcaatgaaataattgagtccaaattattaagaa 10424228  T
Q  694 aataaaaatccaagctgtcaaacccataaggccatgtg 731  Q
     |||||||||||||| | ||| | ||||| ||||||||    
T  10424227 gataaaaatccaagcagccaatcacataatgccatgtg 10424190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 50734316 - 50734459
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||    
T  50734316 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatga 50734415  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  50734416 tccaagtctctatttatagagaaaaaaaaattacgaattttggt 50734459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 50778539 - 50778396
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||    
T  50778539 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatga 50778440  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  50778439 tccaagtctctatttatagagaaaaaaaaattacgaattttggt 50778396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 485 - 638
Target Start/End: Original strand, 41183559 - 41183713
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtc 583  Q
    |||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||         |||||||    
T  41183559 tgcaatacaacaaataaagactaaaacttcaaaagataagctaacacaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtc 41183658  T
Q  584 caaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41183659 caaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 41183713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 51999010 - 51998866
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  51999010 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 51998911  T
Q  596 tccaagtctctatttat--agagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||    
T  51998910 tccaagtctctatttatagagagagaaaaaattacgaattttggt 51998866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 496 - 754
Target Start/End: Complemental strand, 32120209 - 32119942
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||         ||||||||||||||||||    
T  32120209 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaataacttgatttttttttctgtgtccaaatcaaatg 32120110  T
Q  595 atccaagtctctatttatagag-aaaaaaaattacgaattttggt-------nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatatta 686  Q
    |||||||||||||||||||||| ||||||||||||||||||||||                  ||||||||||| | |||||||||||| || || ||||    
T  32120109 atccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaaaataaataaataaaattatttgcaatgaaataattgggtccaaatta 32120010  T
Q  687 gtaagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
     |||||| |||||||||||||| | ||| |  |||| |||||||| ||| ||||||||||||||||||    
T  32120009 ttaagaagataaaaatccaagcagccaatcatataatgccatgtgtcttcctttatccatttcctctc 32119942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 37182839 - 37182696
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||    
T  37182839 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 37182740  T
Q  595 atccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||    
T  37182739 atccaagtctctatttatagagaaataaaattacgaagtttggt 37182696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 41183233 - 41183358
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    |||||| ||||||||||||| | | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41183233 gttagatcatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 41183332  T
Q  270 ccattcaatttttacctctccaatgg 295  Q
    |||| |||||||||||||||||||||    
T  41183333 ccatacaatttttacctctccaatgg 41183358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 496 - 636
Target Start/End: Original strand, 42564246 - 42564387
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  42564246 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 42564345  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttg 636  Q
    || |||||||||||||||||| ||||||||||| ||||||||    
T  42564346 tctaagtctctatttatagagaaaaaaaaattaagaattttg 42564387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 496 - 754
Target Start/End: Original strand, 44084608 - 44084873
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatg 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||         ||||||||||||||||||    
T  44084608 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaataacttgatttttttttctgtgtccaaatcaaatg 44084707  T
Q  595 atccaagtctctatttatagagaaaaaaaa-ttacgaattttggtnnnnnnnnnnntaaaa-----ttatttaccatgaaataattgagttcatattagt 688  Q
    |||||||||||||||||||||||||||||| ||||||||||||||            ||||     |||||| | ||||||||||||  | || |||| |    
T  44084708 atccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaaaaaaaaaaaaaaattatttgcaatgaaataattggttccaaattatt 44084807  T
Q  689 aagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    ||||| |||||||||||||| | ||| |  |||| |||||||| ||| ||||||||||||||||||    
T  44084808 aagaagataaaaatccaagcagccaatcatataatgccatgtgtcttcctttatccatttcctctc 44084873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 4045942 - 4046062
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| ||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4045942 agaccatgtacaatggtaaatcaaattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccct 4046041  T
Q  273 ttcaatttttacctctccaat 293  Q
    || ||||||||||||||||||    
T  4046042 tttaatttttacctctccaat 4046062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 4046420 - 4046564
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||    
T  4046420 aaataaacactaaaacttcaaaagaaatgctaatacaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatg 4046519  T
Q  595 atccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    || ||||||||||||||||||| ||||||||||||||||||||||    
T  4046520 attcaagtctctatttatagagaaaaaaaaattacgaattttggt 4046564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 10426544 - 10426421
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||| ||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  10426544 ttagactatttataatggcaaaatatattcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctcttttaatttaatacc 10426445  T
Q  271 cattcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||||    
T  10426444 cattcaatttttacctctccaatg 10426421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 26165665 - 26165543
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||| ||||||  ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26165665 agaccatgtacaatgggaaaatattttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacaccca 26165566  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  26165565 ttcaatttttacctctccaatgg 26165543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 37183950 - 37183840
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37183950 ttagaccatttacaatggcaaaatatattcaacaaccctcaacactcactttttcaattcctaacactccacatcattttctctctcttaattcaacacc 37183851  T
Q  271 cattcaatttt 281  Q
    |||||||||||    
T  37183850 cattcaatttt 37183840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 50733978 - 50734100
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |    
T  50733978 agaccatttacaatggtaaaatatattcaacaatcctcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaataccta 50734077  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  50734078 ttcaatttttacctctccaatgg 50734100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 50778877 - 50778755
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |    
T  50778877 agaccatttacaatggtaaaatatattcaacaatcctcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaataccta 50778778  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  50778777 ttcaatttttacctctccaatgg 50778755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 38572267 - 38572143
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||| | ||||||||||| |||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| |    
T  38572267 ttagaccatttacaatggtaaaacaaattcaacaaccctcaatacctactttttcaattctcaacactccacattattttctctctcttaattcaacatc 38572168  T
Q  271 cattcaatttttacctctccaatgg 295  Q
     ||||||||||||||||||||||||    
T  38572167 tattcaatttttacctctccaatgg 38572143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 55026699 - 55026823
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||||  ||||||| ||| ||||||||||||||||||||||||||     
T  55026699 ttagactatttacaatggtaaaataaattcaacaaccctcaacacccattttttcaattttcaacacttcacttcattttctctctcttaattcaacact 55026798  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  55026799 cattcaatttttacctctccaatgg 55026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 17466512 - 17466599
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17466512 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 17466599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 43473852 - 43473967
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| ||| | ||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  43473852 agaccatttacaatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacattccagatcattttctctctcttaattcaacaccca 43473951  T
Q  273 ttcaatttttacctct 288  Q
    ||||||||||||||||    
T  43473952 ttcaatttttacctct 43473967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 42560887 - 42560983
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctcttaattcaacaccctttcaatttttaactctccaat 42560983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 36178816 - 36178693
Alignment:
Q  173 agaccatttacaatggtaaaataca-ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 271  Q
    ||||||| ||||||||||||| | | ||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||    
T  36178816 agaccatgtacaatggtaaaaaaaaattcaacacccttcaacacccactttttcaattcccaacacttcaaatcattttctctctcataattcaacatcc 36178717  T
Q  272 attcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||    
T  36178716 attcaatttttacctctccaatgg 36178693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 25790851 - 25790764
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  25790851 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 25790764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 7008015 - 7008113
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  7008015 ttagaccatttacaatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactctacatcattttctctctcttaattcaacac 7008113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 12974663 - 12974753
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca-atttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  12974663 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcatttttttacctctccaatgg 12974753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 27847371 - 27847493
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||| |||| | |||||| | || |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27847371 agaccatgtacaatggaaaaaaatattcaatacccctcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccca 27847470  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    || ||||||||||||| ||||||    
T  27847471 tttaatttttacctcttcaatgg 27847493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 46573036 - 46572916
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||    
T  46573036 agaccatctacaatggtgaaaaacattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctctt-attcaagactca 46572938  T
Q  273 ttcaattttta-cctctccaat 293  Q
    ||||| ||||| ||||||||||    
T  46572937 ttcaacttttaccctctccaat 46572916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 47144170 - 47144255
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  47144170 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaatttttacctctccaat 47144255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 485 - 638
Target Start/End: Original strand, 29701955 - 29702098
Alignment:
Q  485 tgcaatacaacaaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtcc 584  Q
    |||||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||        |||| |||    
T  29701955 tgcaatacaacaaataaagactaaaacttcaaaagaaa-----------agctaataatgagattaagagagtgaaaaacttgattttttttctgtatcc 29702043  T
Q  585 aaatcaaatgatccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29702044 aaatcaaatgatccaagtctctatttatagagagaaaaaaattacgaattttggt 29702098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 5845216 - 5845129
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  5845216 ttcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 5845129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 11908014 - 11908103
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  11908014 ccttcaacacccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaatttttacctcttcaatgg 11908103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 20139320 - 20139445
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| ||||||||| |||  |||||||||||  |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||     
T  20139320 ttagaccatctacaatggttaaaaccattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctcttaattcaacact 20139419  T
Q  271 cattcaatttttacc-tctccaatgg 295  Q
    ||||||| ||||||| ||||||||||    
T  20139420 cattcaacttttaccttctccaatgg 20139445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 623
Target Start/End: Original strand, 55027063 - 55027190
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| |||||||||| |||||||| ||||||| |||| ||||||| | |||||||||||||||||||||         |||||||||||||||||||    
T  55027063 aaataaagactaaaactttaaaagaaaagctaatagaaagataataataatattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatga 55027162  T
Q  596 tccaagtctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||||||||||||    
T  55027163 tccaagtctctatttatagagaaaaaaa 55027190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 6832374 - 6832468
Alignment:
Q  201 aacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||    
T  6832374 aacaaccctcaacatccactttttcaattcccaacactccacatcattttctttcttttaattcaacactcattcaatttttatctctccaatgg 6832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 175 - 294
Target Start/End: Original strand, 138939 - 139059
Alignment:
Q  175 accatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 274  Q
    ||||| ||||||||| |||  |||||||||||  |||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  138939 accatgtacaatggttaaaaccattcaacaacactcaacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcatt 139038  T
Q  275 caattttta-cctctccaatg 294  Q
    ||| ||||| |||||||||||    
T  139039 caacttttaccctctccaatg 139059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 496 - 624
Target Start/End: Original strand, 20139857 - 20139985
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| |||||||||||| |||||| | ||| | |||||||||||| ||||||||||||||||||||||||        || ||| ||||||||||||    
T  20139857 aaataaagactaaaacttcagaagaaaagttaagagaaagctaataataagattaagagagtgaaaaacttgattttttttctctgttcaaatcaaatga 20139956  T
Q  596 tccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||||||||    
T  20139957 tccaagtctctatttatagagaaaaaaaa 20139985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 42601748 - 42601845
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||    
T  42601748 ttcaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccttctccaatgg 42601845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 46123897 - 46124006
Alignment:
Q  182 acaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttt 281  Q
    |||||||||||| | |||||| | || |||||||| |||||||||||| |||||| || ||||||||||||||||| ||||||||||| |||||||||||    
T  46123897 acaatggtaaaaaaaattcaatacccgtcaacacctactttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaatttt 46123996  T
Q  282 tacctctcca 291  Q
    ||||||||||    
T  46123997 tacctctcca 46124006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 48887092 - 48886975
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||||  || |  ||||||||||||||||| ||||||||||||||||||||||     || |||||||||||||||||| |||| |||    
T  48887092 agaccatatacaatggttgaaaattttcaacaaccttcaacatccactttttcaattcccaacac-----attattttctctctcttaatttaacatcca 48886998  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  48886997 ttcaatttttacctctccaatgg 48886975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 540 - 708
Target Start/End: Original strand, 12975173 - 12975343
Alignment:
Q  540 taatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaa-aaattacgaattttggt 638  Q
    |||| ||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  12975173 taataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaataaatcacgaattttggt 12975272  T
Q  639 nnnnnnnnnnnt-aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
               | |||||||||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  12975273 aaaaataaaaataaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 12975343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 35472739 - 35472631
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |||||| | |||| | |||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |    
T  35472739 ttagaccatgtacaatcgcaaaaaaaattcaatacccttcaacatccactttttcaattcccaacactccacattattttctctctcataattcaacatc 35472640  T
Q  271 cattcaatt 279  Q
    |||| ||||    
T  35472639 catttaatt 35472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 577 - 708
Target Start/End: Complemental strand, 4873846 - 4873721
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattg 675  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||            |||||||||||| ||||||||||||    
T  4873846 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggtaaaaa-------aaaattatttacaatgaaataattg 4873754  T
Q  676 agttcatattagtaagaaaataaaaatccaagc 708  Q
    ||| || |||| |||||| ||||||||||||||    
T  4873753 agtccaaattattaagaagataaaaatccaagc 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 624
Target Start/End: Complemental strand, 38571921 - 38571789
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn----ctgtgtccaaatcaa 591  Q
    ||||||| ||||||||||||||||||| | ||||| ||| |||||||| ||||||||||| |||||||||||             |||||||||||||||    
T  38571921 aaataaagactaaaacttcaaaagaaaagttaatagaaaactaataataagattaagagaatgaaaaacttggtttttttttttcctgtgtccaaatcaa 38571822  T
Q  592 atgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||||||||||||    
T  38571821 atgatccaagtctctatttatagagaaaaaaaa 38571789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 508 - 638
Target Start/End: Original strand, 7008422 - 7008560
Alignment:
Q  508 aaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn--------ctgtgtccaaatcaaatgatcca 599  Q
    ||||||||||||||| | ||||| |||||||||||| |||||||||||||||||||||||                 |||| ||||||||||||||||||    
T  7008422 aaacttcaaaagaaaagttaatagaaagctaataataagattaagagagtgaaaaacttggttttttttttctttttctgtatccaaatcaaatgatcca 7008521  T
Q  600 agtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7008522 agtctctatttatagagaaaaaaaatcacgaattttggt 7008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 28155339 - 28155230
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||  ||||||||||| |  ||||| | |||||||||||||||||||||||| | ||||||| |||| |||||||||||| ||||||||||| ||    
T  28155339 agaccattctcaatggtaaaaaaatttcaatacccttcaacacccactttttcaatttctaacactctacataattttctctctcataattcaacactca 28155240  T
Q  273 ttcaattttt 282  Q
    ||||||||||    
T  28155239 ttcaattttt 28155230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 535 - 636
Target Start/End: Complemental strand, 46137003 - 46136902
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattt 634  Q
    ||||||||  ||||||||||||||||||||||||        || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  46137003 gctaataaaaagattaagagagtgaaaaacttgattttttttctatgtccaaatcaaattatccaagtctctatttatagagaaaaaaaatcacgaattt 46136904  T
Q  635 tg 636  Q
    ||    
T  46136903 tg 46136902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 41890520 - 41890618
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  41890520 cattcaacaccattcaacatc-actttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatg 41890617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 42601573 - 42601494
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  42601573 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 42601494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 49823238 - 49823159
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||    
T  49823238 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccatctccaatgg 49823159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 51427105 - 51427184
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||    
T  51427105 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccatctccaatgg 51427184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 15007495 - 15007640
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg--annnnnnnnctgtgtccaaatcaaat 593  Q
    ||||||| |||||||||||||||||||  |||||| |||| ||||||| ||||||||||| |||||||||||           || |||||||||||||     
T  15007495 aaataaagactaaaacttcaaaagaaaaactaatagaaagttaataataagattaagagaatgaaaaacttggttttttttttctatgtccaaatcaaaa 15007594  T
Q  594 gatccaagtctctatttatagagaaaaa-aaattacgaattttggt 638  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||    
T  15007595 gatccaagtctttatttatagagaaaaagaaatcacgaattttggt 15007640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 535 - 708
Target Start/End: Complemental strand, 31169997 - 31169830
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaatt 633  Q
    ||||||||| ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  31169997 gctaataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaa-aaaatcacgaatt 31169899  T
Q  634 ttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||             ||||||||||| |||||||||| |||| || |||| |||||| ||||||||||||||    
T  31169898 ttggtaaaaaat------aaattatttacaatgaaataatagagtccaaattattaagaagataaaaatccaagc 31169830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 49147364 - 49147287
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 286  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  49147364 ttcaacatctactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttacct 49147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 25832811 - 25832724
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||    
T  25832811 cattcaacaccattcaacacc-actttttcaattcccaacacttcacatcattttctctctctt-attcaacactcattcaacttttacc 25832724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 51304347 - 51304420
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    ||||||||||  ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||    
T  51304347 tttttcaattttcaacactccacgtcattttctctatcataattcaacacccattcaatttttacctctccaat 51304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 52000148 - 52000051
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||| |||||||||||   | ||||| |||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||| ||||||||||    
T  52000148 ttcaataaccttcaacatttatttttttaattcccaacactccacatcattttctctctcataattcaacatttattcaatttttacatctccaatgg 52000051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 33934996 - 33935075
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||| ||||||||||||    
T  33934996 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcaatcaacttttaccctctccaatgg 33935075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 35853267 - 35853193
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  35853267 tcaacacccactttttctcttcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 35853193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 43022646 - 43022720
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  43022646 tcaacacccactttttctcttcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 43022720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 47701177 - 47701063
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatca-ttttctctctcttaattcaaca 268  Q
    |||||||||| ||||||||| |||  || ||||||||  |||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||    
T  47701177 gttagaccatatacaatggttaaaaccaatcaacaacactcaacacccactttttcaattctcaacactccacatcatttttttctctctt-attcaaca 47701079  T
Q  269 cccattcaatttttac 284  Q
    | |||| || ||||||    
T  47701078 ctcattaaacttttac 47701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 49086464 - 49086579
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaa 622  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||        ||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  49086464 gctaatagaaagataataataagatgaagatagtgaaaaacttgattttttttctgtgtccaaatcaaatgaaccaaatctctatttatagagaaaaaaa 49086563  T
Q  623 aattacgaattttggt 638  Q
    ||| ||||||||||||    
T  49086564 aatcacgaattttggt 49086579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 49710464 - 49710390
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  49710464 tcaacacccactttttctcttcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 49710390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 708
Target Start/End: Original strand, 11908419 - 11908550
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattga 676  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||           | || | |||| | |||||||||||||    
T  11908419 ctgtgtccaaatcaaatgatccaagtctctatttgtagaggaaaaaaatcacgaattttggtataaaaaaaaattaattaatttgcaatgaaataattga 11908518  T
Q  677 gttcatattagtaagaaaataaaaatccaagc 708  Q
    || || |||| |||||| ||||||||||||||    
T  11908519 gtccaaattattaagaagataaaaatccaagc 11908550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 25450710 - 25450625
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||||| ||||||||||    
T  25450710 ttcaacacccattttttcaattcccaacgctccacatcattttctctctctt-attcaacattcattcaacttttatcctctccaat 25450625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 26162228 - 26162166
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  26162228 ctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaatgacgaattttggt 26162166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 30415150 - 30415088
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  30415150 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 30415088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 532 - 638
Target Start/End: Complemental strand, 35540303 - 35540195
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacg 629  Q
    |||||||||||| |||||||||||||||||||||||           ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |    
T  35540303 aaagctaataataagattaagagagtgaaaaacttggtttattttttctgtgtcaaaatcaaattatccaagtctctatttatagagaaaaaaaatcatg 35540204  T
Q  630 aattttggt 638  Q
    |||||||||    
T  35540203 aattttggt 35540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 35472048 - 35471942
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatag---agaaaaaaaattacgaa 631  Q
    |||||| || |||||||||||||||||||  |||        |||||||||||||||||||||||||||||||||| |||   |||||||||||||||||    
T  35472048 gctaattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaagaaaaaaaattacgaa 35471949  T
Q  632 ttttggt 638  Q
    |||||||    
T  35471948 ttttggt 35471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 37410495 - 37410408
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||| ||||| ||||||||||||    
T  37410495 ttcaacaccatctttttcaattcccaatactccacatcattttctctctctt-attcaacattcattcaacttttaccctctccaatgg 37410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 506 - 624
Target Start/End: Complemental strand, 46572720 - 46572601
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnct-gtgtccaaatcaaatgatccaagtct 604  Q
    ||||||||||||||||| ||||||| |||| ||||||  ||||||||| |||||||||||||          | ||||||||||||||||| ||||||||    
T  46572720 taaaacttcaaaagaaaagctaatagaaagataataacaagattaagatagtgaaaaacttggtttttttttttgtgtccaaatcaaatgaaccaagtct 46572621  T
Q  605 ctatttatagagaaaaaaaa 624  Q
    ||||||||||| ||||||||    
T  46572620 ctatttatagacaaaaaaaa 46572601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 540 - 638
Target Start/End: Complemental strand, 48886558 - 48886459
Alignment:
Q  540 taatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    |||| |||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||    
T  48886558 taataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatcaaagtctctatttgtagagaaaaaaaaatcacgaattttggt 48886459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 25787448 - 25787386
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  25787448 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 25787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 25829405 - 25829343
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  25829405 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 25829343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 28410392 - 28410477
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatg 294  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||| || ||||||||| ||||||| ||||||| |||||||||    
T  28410392 tcaacacccactttttctcttcccaacactccacgtcattttctctct-tttattcaacactcattcaacttttaccatctccaatg 28410477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 33934935 - 33934873
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  33934935 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 33934873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 42598103 - 42598041
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  42598103 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 42598041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 6832948 - 6833055
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacg 629  Q
    |||||||||||| |||||||||||||||||||||||           |||||| ||||||||||||||||||||||||||| ||||| |||||||| |||    
T  6832948 aaagctaataataagattaagagagtgaaaaacttggttttttttttctgtgttcaaatcaaatgatccaagtctctatttgtagag-aaaaaaatcacg 6833046  T
Q  630 aattttggt 638  Q
    |||||||||    
T  6833047 aattttggt 6833055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 35424085 - 35424009
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| | |||||||    
T  35424085 ttcaacatccattttttcaattcccaacactccacatcattttttctctctt-attcaacactcattcgacttttacc 35424009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 49028644 - 49028559
Alignment:
Q  183 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaaca 268  Q
    ||||||||||| |  ||||| | |||||||||| |||||||| |||||||||||||||| |||||||||||| || ||||||||||    
T  49028644 caatggtaaaaaaatttcaatacccttcaacacacacttttttaattcccaacactccatatcattttctctatcataattcaaca 49028559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 49822637 - 49822576
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||    
T  49822637 ctgtgtccaaatcaaattatccaagtttctatttatagagaaaaaaaatcatgaattttggt 49822576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 50017058 - 50017126
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||    
T  50017058 ccactttttcaattcccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc 50017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 577 - 708
Target Start/End: Complemental strand, 51999756 - 51999626
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagt--ctctatttatagag-aaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataat 673  Q
    |||||||||||| |||||||||||||  |||||||||||||| ||||||||| ||||||||||||           ||||||||||| | ||||||||||    
T  51999756 ctgtgtccaaatgaaatgatccaagtctctctatttatagagaaaaaaaaatcacgaattttggt----aaaaaaataaaattatttgctatgaaataat 51999661  T
Q  674 tgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||| || |||| |||||| ||||||||||||||    
T  51999660 tgagtccaaattattaagaagataaaaatccaagc 51999626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 27847966 - 27848029
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaaattacgaattttggt 638  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  27847966 ctgtgtcaaaatcaaatgatccaagtctctatttatagaggaaaaaaaaatcacgaattttggt 27848029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 33748682 - 33748769
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||| || | ||||||| ||||||| ||||||| ||||||||||    
T  33748682 ttcaacacctattttttcaatttccaacactccacatcattttctctct-tttactcaacactcattcaacttttaccttctccaatgg 33748769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 5844711 - 5844664
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5844711 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 5844664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 17469797 - 17469844
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17469797 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 17469844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 42602251 - 42602298
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42602251 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 42602298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 637
Target Start/End: Original strand, 43475751 - 43475862
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn---ctgtgtccaaatcaaatgatccaagtctctatttatagaga---aaaaaaat 625  Q
    |||||||||||| |||||||||||||||||||||||            ||||||||||||||||||||| |||||||||||||||||||   ||||||||    
T  43475751 aaagctaataataagattaagagagtgaaaaacttggtttttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagagagagaaaaaaat 43475850  T
Q  626 tacgaattttgg 637  Q
     |||||||||||    
T  43475851 cacgaattttgg 43475862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 47147654 - 47147701
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47147654 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 47147701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 638
Target Start/End: Original strand, 51304897 - 51305003
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaa 631  Q
    ||||||||| ||||||||||||||||||| ||||          |||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||    
T  51304897 gctaataataagattaagagagtgaaaaatttgattttttttttctgtgtccaaatcaaatgatccaagtttctatttgtagaggaaaaaaaatcacgaa 51304996  T
Q  632 ttttggt 638  Q
    |||||||    
T  51304997 ttttggt 51305003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 25450173 - 25450111
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||    
T  25450173 ctgtgtccaaatcaaatgaaccaagtctctatttatagaggaaaaaaaatcatgaattttggt 25450111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 42258315 - 42258365
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctctt 259  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  42258315 tcaacacccactttttctcttcccaacactccacatcattttctctctctt 42258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 706
Target Start/End: Complemental strand, 49027106 - 49026979
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctcta--tttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataatt 674  Q
    |||||||||||||||||||||||||||||||  | || ||||| ||||||| ||||||||||||           ||||||||||| | |||||||||||    
T  49027106 ctgtgtccaaatcaaatgatccaagtctctatctgtagagagagaaaaaatcacgaattttggt----aaaaaaataaaattatttgcaatgaaataatt 49027011  T
Q  675 gagttcatattagtaagaaaataaaaatccaa 706  Q
    |||| || |||| |||||| ||||||||||||    
T  49027010 gagtccaaattattaagaagataaaaatccaa 49026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 578 - 636
Target Start/End: Original strand, 50020377 - 50020435
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttg 636  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  50020377 tgtgttcaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttg 50020435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 51436008 - 51436070
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||    
T  51436008 ctgtgtccaaatcaaatgatctaagtctctatttatagaggaaaaaaaatcatgaattttggt 51436070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 7521213 - 7521145
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 277  Q
    |||||||||| ||||||||||| |||||||| || ||||||||||||||||| ||||||||| |||||||    
T  7521213 ttcaacacccgctttttcaatttccaacacttcagatcattttctctctctt-attcaacactcattcaa 7521145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 624
Target Start/End: Complemental strand, 33187846 - 33187753
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||| ||||| |||||||||||||||||          ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33187846 aaagctaataataagatttagagagtgaaaaacttggtttttttttctgtgtccaaatcaaataatccaagtctctatttataaagaaaaaaaa 33187753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 578 - 638
Target Start/End: Complemental strand, 36178172 - 36178111
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  36178172 tgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaatcacgaattttggt 36178111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 15493895 - 15493812
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatg 294  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||   | ||||||||  ||||||| ||||||| |||||||||    
T  15493895 tcaacaccctctttttcaattcccaacactccacatcactttctctc---ttattcaacattcattcaacttttaccatctccaatg 15493812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 578 - 638
Target Start/End: Complemental strand, 26549932 - 26549872
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||| | ||||||||||    
T  26549932 tgtgtccaaatcaaatgaaccaagtctttatttatagacaaaaaaaatcatgaattttggt 26549872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 33751694 - 33751741
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  33751694 ctgtgcccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 33751741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 37410177 - 37410130
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  37410177 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaa 37410130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 49356978 - 49356931
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  49356978 ctgtgtccaaatcaaatgaaccaagtctctatttaaagagaaaaaaaa 49356931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 625
Target Start/End: Complemental strand, 7520818 - 7520772
Alignment:
Q  579 gtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaat 625  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  7520818 gtgtccaaatcaaataaaccaagtctctatttatagagaaaaaaaat 7520772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 15493466 - 15493408
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| |  |||||||||    
T  15493466 tgtccaaatcaaatgaaccaagtctctatttatagacaaaaaaaatcataaattttggt 15493408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 28410775 - 28410837
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||||    
T  28410775 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 28410837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 35852931 - 35852869
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||||    
T  35852931 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 35852869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 43022984 - 43023046
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||||    
T  43022984 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 43023046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 577 - 618
Target Start/End: Original strand, 50034673 - 50034714
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaa 618  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  50034673 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaa 50034714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 744225 - 744265
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctctta 260  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  744225 tttttcaattaccaacactccacatcattttctctctctta 744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 49357565 - 49357486
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||| |||||| |||| | || ||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  49357565 ccacttttttaattcctaacatttcatatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 49357486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 50176149 - 50176109
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctctta 260  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctctta 50176109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 30688594 - 30688547
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||    
T  30688594 ctgtgtccaaatcaaatgaatcaaatctctatttatagagaaaaaaaa 30688547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 33795201 - 33795155
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  33795201 ctgtgtccaaatcaaatgaaccaagtc-ctatttatagagaaaaaaaa 33795155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 49147010 - 49146963
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  49147010 ctgtgtccaaatcaaatgaaccaattctctatttatagacaaaaaaaa 49146963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 53722873 - 53722920
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  53722873 ctgtgtccaaatcaaatgaacaaagtctctatttatagacaaaaaaaa 53722920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 31170303 - 31170261
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcatt 248  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  31170303 ccttcaacacccattttttcaattcccaacactctacatcatt 31170261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 49710193 - 49710131
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||||    
T  49710193 ctgtgtcaaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 49710131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 708
Target Start/End: Original strand, 51305024 - 51305077
Alignment:
Q  655 ttatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | ||||||||||||||| || |||| |||||||||||||||||||||    
T  51305024 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagc 51305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 578 - 638
Target Start/End: Complemental strand, 35423696 - 35423636
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||| ||||||||  |||||||||||||||| | ||||||||| | ||||||||||    
T  35423696 tgtgtccaagtcaaatgaatcaagtctctatttataaacaaaaaaaatcatgaattttggt 35423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 50415498 - 50415452
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||    
T  50415498 ctgtgtccaaatcaaatgatccaaatctcta-ttatagaggaaaaaaa 50415452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 624
Target Start/End: Original strand, 51974630 - 51974673
Alignment:
Q  581 gtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||    
T  51974630 gtccaaatcaaatgaaccaagtttctatttatagacaaaaaaaa 51974673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #132
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 582 - 624
Target Start/End: Complemental strand, 30862497 - 30862455
Alignment:
Q  582 tccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||| ||||||||||||||||| | ||||||||    
T  30862497 tccaaatcaaatgaaccaagtctctatttataaacaaaaaaaa 30862455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #133
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 33795568 - 33795496
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    ||||||| ||||||||| ||||||||||| |||   ||||||||||| |||| ||||||||| ||||||| ||||||    
T  33795568 ttcaacatccacttttttaattcccaacaatcc---tcattttctctttctt-attcaacactcattcaacttttac 33795496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #134
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 708
Target Start/End: Complemental strand, 36178094 - 36178036
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||| | || |||||||||||| || |||| |||||| ||||||||||||||    
T  36178094 taaaattatttgctataaaataattgagtccaaattattaagaagataaaaatccaagc 36178036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #135
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 622
Target Start/End: Original strand, 39291089 - 39291127
Alignment:
Q  584 caaatcaaatgatccaagtctctatttatagagaaaaaa 622  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  39291089 caaatcaaatgaaccaagtctctatttatagataaaaaa 39291127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #136
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 708
Target Start/End: Complemental strand, 48886444 - 48886386
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||| | |||||||||| |||| || |||| |||||| ||||||||||||||    
T  48886444 taaaattatttgcaatgaaataatcgagtccaaattattaagaagataaaaatccaagc 48886386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #137
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 49407413 - 49407336
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 286  Q
    ||||||| |||||||||||||| | |||||| ||| | ||||||||||| || |||||| || ||||||| ||||||||    
T  49407413 ttcaacatccactttttcaatttcgaacacttcaccttattttctctct-tttattcaatactcattcaacttttacct 49407336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #138
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Original strand, 42564407 - 42564464
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | |||||||||||| || || |||| |||||| ||||||||||||||    
T  42564407 aaaattatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagc 42564464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 496 - 754
Target Start/End: Original strand, 42881904 - 42882155
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||        |||||||||||||||||||    
T  42881904 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 42882003  T
Q  596 tccaagtctctatttataga-gaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaaa 694  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||            |||||||||| | ||||||||||||||| || |||| ||||||     
T  42882004 tccaaatctctatttatagaggaaaaaaaattacaaattttggtaaaa--------aaaattatttgcaatgaaataattgagtccaaattattaagaag 42882095  T
Q  695 ataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    |||||||||||||| | ||| | ||||| | |||||| ||||||||||||||||||||||    
T  42882096 ataaaaatccaagcagccaatcacataatgtcatgtgtcttgctttatccatttcctctc 42882155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 36518473 - 36518598
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36518473 gttagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 36518572  T
Q  270 ccattcaatttttacctctccaatgg 295  Q
     |||||||||||||||||||||||||    
T  36518573 tcattcaatttttacctctccaatgg 36518598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 28317853 - 28317711
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  28317853 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 28317754  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28317753 tccaagtctctatttatagagaaaaaaaattacgaattttggt 28317711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 47159607 - 47159484
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47159607 ttagaccatttacaatggtaaaatacattcaacaaccttcaacatccacttttt-aattcccaacactccacatcattttctctctcttaattcaacacc 47159509  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  47159508 cattcaatttttacctctccaatgg 47159484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 37951709 - 37951832
Alignment:
Q  174 gaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcatttt--ctctctcttaattcaacaccc 271  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  37951709 gaccatttacaatggtaaaatacattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctctcttaattcaacaccc 37951808  T
Q  272 attcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||    
T  37951809 attcaatttttacctctccaatgg 37951832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 30720420 - 30720561
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||        |||||||||||||||||||    
T  30720420 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagtgtgaaaaacttga-tttttttctgtgtccaaatcaaatga 30720518  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  30720519 tctaagtctctatttatagagaaaaaaaattacgaattttggt 30720561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 42881319 - 42881441
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||| ||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42881319 agaccatttacaatggcaaattatattcaacaaccctcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccaa 42881418  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  42881419 ttcaatttttacctctccaatgg 42881441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 30720079 - 30720203
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||| ||||||| |||| |||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30720079 ttagatcatttacgatggcaaaatatattcaacaaccctcaacacctactttttcaatttccaacactccacatcattttctctctcttaattcaacacc 30720178  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||| ||||||    
T  30720179 cattcaatttttacctcttcaatgg 30720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 40300705 - 40300560
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||        |||||||||||||||||||    
T  40300705 aaataaatactaaaacttcaaaagaaaagctaatacaaagctaataataagattaagagaatgaaaaacttgattttttttctgtgtccaaatcaaatga 40300606  T
Q  596 tccaagtctctatttatagag---aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||   ||||||||||||||||||||||    
T  40300605 tccaagtctctatttatagagagaaaaaaaaattacgaattttggt 40300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 497 - 754
Target Start/End: Complemental strand, 47159181 - 47158920
Alignment:
Q  497 aataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||         ||||||||| |||||||||    
T  47159181 aataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgatttttttttctgtgtccacatcaaatga 47159082  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt--nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaaga 692  Q
    | ||||||||||||||||||| ||||||||||||||||||||||              |||||||||| | |||||||||||| || || |||| |||||    
T  47159081 ttcaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaaaaaaaaaaaattatttgcaatgaaataattgggtccaaattattaaga 47158982  T
Q  693 aaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    |||||||||||||||| | ||| | | ||| |||| ||  | | ||||||||||||||||||    
T  47158981 aaataaaaatccaagcagccaatcacttaatgccacgtatcctcctttatccatttcctctc 47158920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 40302604 - 40302480
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||| | | | ||||||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40302604 ttagaccatttacaatggtcacaaatattcaacaatcctcgacacccattttttcaattcccaacactccacatcattttctctctcttaattcaacact 40302505  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  40302504 cattcaatttttacctctccaatgg 40302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 33078896 - 33078776
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| ||| | ||||||||||| |||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||    
T  33078896 agaccatttacaatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacactccacgttattttctctctcttaattcaacattca 33078797  T
Q  273 ttcaatttttacctctccaat 293  Q
    |||||||||||||||||||||    
T  33078796 ttcaatttttacctctccaat 33078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 37887812 - 37887928
Alignment:
Q  177 catttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca 276  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |    
T  37887812 catttacaatggtaaaataaattcaacaatcttcaacatccattttttcaattcccaacactccacatcattttatctctcttaattcaacatccattta 37887911  T
Q  277 atttttacctctccaat 293  Q
    |||||||||||| ||||    
T  37887912 atttttacctcttcaat 37887928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 30566570 - 30566681
Alignment:
Q  182 acaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttt 281  Q
    |||||||||||| | ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30566570 acaatggtaaaacaaattcaacaatcctcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaatttt 30566669  T
Q  282 tacctctccaat 293  Q
    || |||||||||    
T  30566670 tatctctccaat 30566681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 45549732 - 45549610
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |||||||| |||| |  ||||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  45549732 ttagaccatgtacaatgggaaaaaaatttcaatacccttcaacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacc 45549633  T
Q  271 cattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||    
T  45549632 cattcaatttttacctctccaat 45549610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 496 - 609
Target Start/End: Original strand, 22660183 - 22660296
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  22660183 aaataaatactaaaacttcaaaagaaaagctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 22660282  T
Q  596 tccaagtctctatt 609  Q
    ||||||||||||||    
T  22660283 tccaagtctctatt 22660296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 39769715 - 39769812
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  39769715 ttcaataaccttcaacacccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctctaatgg 39769812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 5813094 - 5813181
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5813094 ttcaacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaatttttacctctccaatgg 5813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 35029185 - 35029098
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35029185 ttcaacacctactttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 35029098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 33508638 - 33508517
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccacttttt-caattcccaacactccacatcattttctctctcttaattcaacaccc 271  Q
    |||||||||||||||||  || |  |||||||||| |||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||||| |    
T  33508638 agaccatttacaatggttcaaaagtttcaacaaccctcaacacccatttttttcaattcccaacactctacgtcattttctctctcttaattcaacactc 33508539  T
Q  272 attcaatttttacctctccaat 293  Q
    ||||||||||||||||||||||    
T  33508538 attcaatttttacctctccaat 33508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 28318156 - 28318046
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| || |||||||||  | ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28318156 ttagaccatgtataatggtaaaccaaattcaacaacctttaacatccacttttttaattcccaacactccacatcattttctctctcttaattcaacacc 28318057  T
Q  271 cattcaatttt 281  Q
    | || ||||||    
T  28318056 cttttaatttt 28318046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 20354217 - 20354306
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||    
T  20354217 ccttcaacacctactttttcaattcctaacactccacatcattttttctatcataattcaacacccattcaatttttacctctccaatgg 20354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 32130345 - 32130260
Alignment:
Q  210 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  32130345 caacacccacttttttaattcccaacactccacatcattttctctctcataatttaatacccattcaatttttacctctccaatgg 32130260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 496 - 708
Target Start/End: Complemental strand, 33508372 - 33508164
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||||||| | ||||  |||| ||||||| |||||| || ||||||||||||||        |||||||||||||||||||    
T  33508372 aaataaagactaaaacttcaaaagaaaagttaatggaaagttaataataagatta-gaaagtgaaaaacttgattttttt-ctgtgtccaaatcaaatga 33508275  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaaaa 695  Q
    |||||||||||||||||||||||| ||||| |||||||||| |           ||||||||||| | ||||||||||||||| || |||| ||||||||    
T  33508274 tccaagtctctatttatagagaaa-aaaatcacgaattttgat-aaaaataaaataaaattatttgcaatgaaataattgagtccaaattattaagaaaa 33508177  T
Q  696 taaaaatccaagc 708  Q
    |||||||||||||    
T  33508176 taaaaatccaagc 33508164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 26812072 - 26812196
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |||||||| |||| |  ||||| | ||||||||||||| |||||||||||||||||||||| |||||||| ||| || |||||||| ||     
T  26812072 ttagaccatgtacaatggcaaaaaaatttcaatacccttcaacacccattttttcaattcccaacactccatatcattttatctttcataattcaatact 26812171  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    ||||||| |||||||||||||||||    
T  26812172 cattcaaattttacctctccaatgg 26812196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 33078577 - 33078433
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg-annnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||| |||||||||||||||||||  |||||| |||||||||||| ||||||||||| |||||||||||          ||||||||||||||||||    
T  33078577 aaataaagactaaaacttcaaaagaaaaactaatagaaagctaataataagattaagagaatgaaaaacttgttttttttttctgtgtccaaatcaaatg 33078478  T
Q  595 atccaagtctctatttatagagaaaaa-aaattacgaattttggt 638  Q
    ||| ||||||||||||||||||||||| |||| | ||||||||||    
T  33078477 atcaaagtctctatttatagagaaaaagaaatcatgaattttggt 33078433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 197 - 295
Target Start/End: Complemental strand, 22737682 - 22737584
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||    
T  22737682 attcaacagcattcaacacccactttttcaattcccaacactccacatcattttctctctctt-attcaacattcattcaacttttaccttctccaatgg 22737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 22656629 - 22656750
Alignment:
Q  174 gaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccat 273  Q
    |||||||||||||||| | | | ||||||||| | | |||| ||| ||||| |||||| ||||| |||||||||||||||||| ||||||||||| ||||    
T  22656629 gaccatttacaatggtcacaaatattcaacaaaccttaacatccatttttttaattcctaacacgccacatcattttctctcttttaattcaacatccat 22656728  T
Q  274 tcaatttttacctctccaatgg 295  Q
    | ||||||||||||| ||||||    
T  22656729 ttaatttttacctcttcaatgg 22656750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 26815505 - 26815566
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26815505 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaatgacgaattttggt 26815566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 32126942 - 32126881
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32126942 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaattacgaattttggt 32126881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 32749333 - 32749394
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32749333 ctgtgtccaaatcaaatgttccaagtctctatttatagagaaaaaaaattacgaattttggt 32749394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 577 - 708
Target Start/End: Original strand, 39770110 - 39770238
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattga 676  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||           ||||||||||| | |||||||||||||    
T  39770110 ctgtgtccaaatcaaatgatctaagtctctatttatagagagaaaaaatcacgaattttggt---aaaaaaaataaaattatttgctatgaaataattga 39770206  T
Q  677 gttcatattagtaagaaaataaaaatccaagc 708  Q
    || || |||| |||||| ||||||||||||||    
T  39770207 gtccaaattattaagaagataaaaatccaagc 39770238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 22191205 - 22191303
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  22191205 cattcaacaccattcaacacc-actttttcaatttccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatg 22191302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 163 - 294
Target Start/End: Original strand, 32748748 - 32748879
Alignment:
Q  163 atctttggttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaat 262  Q
    |||||| || ||||||| |||||||| |||| |  |||||   | ||||||| | | ||||||||||||||||||||||||| |||||||||||| ||||    
T  32748748 atcttttgtcagaccatgtacaatggcaaaaaaatttcaatgcctttcaacatctattttttcaattcccaacactccacattattttctctctcataat 32748847  T
Q  263 tcaacacccattcaatttttacctctccaatg 294  Q
    | ||||| |||||||||||||| |||||||||    
T  32748848 ttaacactcattcaatttttacatctccaatg 32748879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 37888708 - 37888822
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||| |||| ||||||| |||| |||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||    
T  37888708 gctaatagaaagataataattagatgaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 37888807  T
Q  624 attacgaattttggt 638  Q
    || | ||||||||||    
T  37888808 atcatgaattttggt 37888822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 636
Target Start/End: Original strand, 115010 - 115116
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttat--agagaaaaaaaattacg 629  Q
    |||||||||||| ||||||||||||||||||||||||        |||||||||| |||||||||| ||||||||||||||  ||||| ||||||| |||    
T  115010 aaagctaataataagattaagagagtgaaaaacttgatttttttcctgtgtccaagtcaaatgatctaagtctctatttatagagagagaaaaaatcacg 115109  T
Q  630 aattttg 636  Q
    |||||||    
T  115110 aattttg 115116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 43571169 - 43571095
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  43571169 tcaacacccactttttctcttcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 43571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 24793477 - 24793574
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||| | |||||||||| ||||||||| ||||||||||||| |||||||||||| |||| ||||||||| ||||||| |||||| |||||||||||    
T  24793477 ttcaacaccattcaacaccccctttttcaagtcccaacactccaaatcattttctctttctt-attcaacactcattcaacttttacactctccaatgg 24793574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 506 - 624
Target Start/End: Complemental strand, 35192866 - 35192748
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    ||||||||||||||||||| || || |||| ||||||| ||||||||| |||||||||||||         ||| ||||||||||||| | |||||||||    
T  35192866 taaaacttcaaaagaaaggttactagaaagataataataagattaagatagtgaaaaacttggttttttttctgagtccaaatcaaataaaccaagtctc 35192767  T
Q  606 tatttatagagaaaaaaaa 624  Q
    |||||||||| ||||||||    
T  35192766 tatttatagataaaaaaaa 35192748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 40690707 - 40690769
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  40690707 ctgtgtccaaatcaaatgatccaagtctctatttattgagtaaaaaaaattacgaattttggt 40690769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 624
Target Start/End: Complemental strand, 30630380 - 30630279
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaa 622  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  30630380 gctaatagaaagataataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaa 30630281  T
Q  623 aa 624  Q
    ||    
T  30630280 aa 30630279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 114486 - 114573
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||| || ||||| | ||||||||||    
T  114486 ttcaacacccactttttaaattctcaacactccacatcattttctctctctt-attcaacactcatttaacttttatcatctccaatgg 114573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 21654850 - 21654929
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  21654850 ccactttttcaatttccaacactccacatcattttctctctctt-attcaacactcattcaacatttaccctctccaatgg 21654929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 35193195 - 35193108
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| ||| || ||||||||| ||||||| ||||||| ||||||||||    
T  35193195 ttcaacactcactttttcaattcccaacactccacataattttctttctatt-attcaacactcattcaacttttaccatctccaatgg 35193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 38351584 - 38351660
Alignment:
Q  217 cactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||| |||| |||||||||||||||||||||||| || ||||||||||  |||| ||||||||||||||||||    
T  38351584 cacttttttaatttccaacactccacatcattttctctttcataattcaacattcatttaatttttacctctccaat 38351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 496 - 567
Target Start/End: Original strand, 30566922 - 30566993
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg 567  Q
    ||||||| ||||||||||||||||||| | ||||| |||||||||||| ||||||||||||| |||||||||    
T  30566922 aaataaagactaaaacttcaaaagaaaagttaatagaaagctaataataagattaagagagttaaaaacttg 30566993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 5813659 - 5813721
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  5813659 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaattatgaattttggt 5813721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 636
Target Start/End: Original strand, 37952115 - 37952217
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaatt 633  Q
    ||||||||| ||||||||||||||||||   |||        |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  37952115 gctaataataagattaagagagtgaaaattatgattttttttctgtgtccaaatcaaatgattcaagtctctatttatagagaaaaaaaaatcacgaatt 37952214  T
Q  634 ttg 636  Q
    |||    
T  37952215 ttg 37952217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 638
Target Start/End: Complemental strand, 45549120 - 45549018
Alignment:
Q  537 taataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaatttt 635  Q
    ||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||| | ||||||| ||||||||| ||||| |||||||||    
T  45549120 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaaatttctatttgtagagaaaaaaaaatcacgaatttt 45549021  T
Q  636 ggt 638  Q
    |||    
T  45549020 ggt 45549018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 48985265 - 48985311
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48985265 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 48985311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 532 - 618
Target Start/End: Original strand, 38970384 - 38970472
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaatgatccaagtctctatttatagagaa 618  Q
    |||||||||||| |||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||    
T  38970384 aaagctaataataagattaagagagtgaaaaacttgtttttttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaa 38970472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 578 - 638
Target Start/End: Original strand, 24793818 - 24793878
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||    
T  24793818 tgtgtccaaatcaaacgaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 24793878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 30630882 - 30630803
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||| || ||||||| |||||| |||||||||||    
T  30630882 ccacttttttaattcccaacactccacattattttctctctctt-attcaatactcattcaacttttactctctccaatgg 30630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 36521878 - 36521941
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttat--agagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  36521878 ctgtgtccaaatcaaatgatccaagtctctatttataaagaaaaaaaaaatcacgaattttggt 36521941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 38970017 - 38970115
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctct--ctcttaattcaacacccattcaatttttacc-tctccaatg 294  Q
    ||||||| | |||||||||||||||||||||| |||||||||||||||||||| | |  ||||| ||||||||| ||||||| ||||||| |||||||||    
T  38970017 ttcaacacctttcaacacccactttttcaatttccaacactccacatcatttttttttcctctt-attcaacactcattcaacttttaccgtctccaatg 38970115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 48984911 - 48984990
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||  |||||| ||||||||||    
T  48984911 ccactttttcaatttccaacgctccacatcattttctctctctt-attcaacactcattcaacatttaccatctccaatgg 48984990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 35028511 - 35028464
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35028511 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 35028464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 22194613 - 22194675
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||    
T  22194613 ctgtgtccaaatcaaatgatccaagtctttatttatagatgaaaaaaaatcatgaattttggt 22194675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 25038663 - 25038582
Alignment:
Q  214 acccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||| |||| |||| ||||||| ||||| ||||||||||||    
T  25038663 acccacttttttaattcccagcacttcacatcattttctctctctt-attcgacactcattcaagttttaccctctccaatgg 25038582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 37888220 - 37888282
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||    
T  37888220 ctgtgtccaaatcaaatgatctaaatctctatttatagagaaaaaaaaatcacgaattttggt 37888282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 578 - 623
Target Start/End: Original strand, 33379667 - 33379712
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  33379667 tgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaa 33379712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 623
Target Start/End: Complemental strand, 25217981 - 25217935
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  25217981 ctgtgtccaaatcaaatgaaccaaatctctatttatagagaaaaaaa 25217935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 38351995 - 38352057
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||| |||||||||||| ||||||||||||| ||||| ||||||||| ||||||||||||    
T  38351995 ctgtgtctaaatcaaatgattcaagtctctatttgtagagaaaaaaaaatcacgaattttggt 38352057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 43570833 - 43570771
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||||    
T  43570833 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 43570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 25218881 - 25218797
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||| |||||||||||||| |||||||| || ||||||||||||||||| |||||| || |||| || ||||| ||||||||||||    
T  25218881 aacatccactttttcaatttccaacacttcatatcattttctctctctt-attcaatactcatttaacttttaccctctccaatgg 25218797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 708
Target Start/End: Original strand, 22660323 - 22660381
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  22660323 taaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 22660381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 24204352 - 24204278
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcat 247  Q
    ||||||| || ||||| |||| |  ||||| | ||||||||||||||||||||||||| ||||| ||||||||||    
T  24204352 agaccatgtataatggaaaaaaaatttcaatacccttcaacacccactttttcaattctcaacaatccacatcat 24204278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 582 - 624
Target Start/End: Complemental strand, 25038278 - 25038236
Alignment:
Q  582 tccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  25038278 tccaaatcaaatgaaccaagtctctatttatagacaaaaaaaa 25038236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 43202228 - 43202163
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaa-cactccacatcattttctctctctta 260  Q
    ||||||||||  ||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  43202228 cattcaacaaaattcaacatccactttttcaatgcccaatcacttcacattattttctctctctta 43202163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 708
Target Start/End: Complemental strand, 45548999 - 45548946
Alignment:
Q  655 ttatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | ||||||||||||||| || |||| |||||||||||||||||||||    
T  45548999 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagc 45548946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 26013258 - 26013189
Alignment:
Q  224 tcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatg 294  Q
    |||||| ||||||||||| |||||||||||||||||  ||||| || ||||||| |||||| ||||||||||    
T  26013258 tcaatttccaacactccatatcattttctctctctt--ttcaatactcattcaacttttactctctccaatg 26013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 37888523 - 37888575
Alignment:
Q  183 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaac 235  Q
    ||||||| ||| |||||||||| | ||||||| ||||||||||||||||||||    
T  37888523 caatggttaaacacattcaacaccattcaacatccactttttcaattcccaac 37888575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 637
Target Start/End: Complemental strand, 1939604 - 1939556
Alignment:
Q  588 tcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttgg 637  Q
    |||||||| ||||||||||||||||||| ||||||||| | |||||||||    
T  1939604 tcaaatgaaccaagtctctatttataga-aaaaaaaatcatgaattttgg 1939556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 8e-60; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 496 - 754
Target Start/End: Complemental strand, 22349672 - 22349407
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||        |||||||||||||||||||    
T  22349672 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 22349573  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt------nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagt 688  Q
    ||||||||||||||||||||| ||||||||||||||||||||||                  |||||||||| | ||||||||||||||| || |||| |    
T  22349572 tccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaaaaaaaaaaaaaaaattatttgcaatgaaataattgagtccaaattatt 22349473  T
Q  689 aagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    ||||| |||||||||||||| | ||| | ||||| |||||||| ||||||||||||||||||||||    
T  22349472 aagaagataaaaatccaagcagccaatcacataatgccatgtgtcttgctttatccatttcctctc 22349407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 7588618 - 7588492
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctct--ctcttaattcaaca 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  7588618 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctcttaattcaaca 7588519  T
Q  269 cccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||    
T  7588518 cccattcaatttttacctctccaatgg 7588492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 496 - 754
Target Start/End: Original strand, 43021991 - 43022248
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga---nnnnnnnnctgtgtccaaatcaaa 592  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||           ||||||||||||||||    
T  43021991 aaataaacactaaaacttcaaaagaaaggctaatacaaatctaatgataagattaagagagtgaaaaacttgatttttttttttctgtgtccaaatcaaa 43022090  T
Q  593 tgatccaagtctctatttatagag-aaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaag 691  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||            |||||||||| | ||||||||||||||| || |||| ||||    
T  43022091 tgatccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaa-----aaaattatttgcaatgaaataattgagtccaaattattaag 43022185  T
Q  692 aaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    || |||||||||||||| | ||| | ||||| | |||||| ||||||||||||||||||||||    
T  43022186 aagataaaaatccaagcagccaatcacataatgtcatgtgtcttgctttatccatttcctctc 43022248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 22351728 - 22351604
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22351728 ttagaccatttacaatggtaatcaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 22351629  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  22351628 cattcaatttttacctctccaatgg 22351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 14383271 - 14383415
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  14383271 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 14383370  T
Q  596 tccaagtctctatttatagag--aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  14383371 tccaagtctctatttatagaggaaaaaaaaattacgaattttggt 14383415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 44280418 - 44280561
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  44280418 aaataaacactaaaacttcaaaagaaagactaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 44280517  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  44280518 tccaagtctctatttatagagaaaaaaaaattacgaattttggt 44280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 43021713 - 43021825
Alignment:
Q  183 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 282  Q
    ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43021713 caatggtaacaaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 43021812  T
Q  283 acctctccaatgg 295  Q
    |||||||||||||    
T  43021813 acctctccaatgg 43021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 36527120 - 36527265
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga--nnnnnnnnctgtgtccaaatcaaat 593  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||    
T  36527120 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttttctgtgtccaaatcaaat 36527219  T
Q  594 gatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  36527220 gatccaagtctctatttatagagaaaaaaaaaatacgaattttggt 36527265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 36526783 - 36526904
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  36526783 agaccatttacaatggcaaaatatattcaacaacccttaacacccactttttcaattcccaacactccacattattttctctctcttaatttaacaccca 36526882  T
Q  273 ttcaatttttacctctccaatg 294  Q
    || |||||||||||||||||||    
T  36526883 tttaatttttacctctccaatg 36526904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 14382927 - 14383051
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||| |||||| |||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14382927 ttagaccatttacaatggcaaaatatattcaaaaaccctcaacatccactttttcaattcctaacactccacatcattttctctctcttaattcaacacc 14383026  T
Q  271 cattcaatttttacctctccaatgg 295  Q
      |||||||||||||||||||||||    
T  14383027 ttttcaatttttacctctccaatgg 14383051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 44279951 - 44280074
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    |||||||||| ||||||||||||  | ||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  44279951 gttagaccatgtacaatggtaaatcaaattcaacaacctttaacacccactttttcaattttcaacactccacatcattttctctctcttaattcaacac 44280050  T
Q  270 ccattcaatttttacctctccaat 293  Q
    || |||||||||||||||||||||    
T  44280051 cctttcaatttttacctctccaat 44280074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 1073195 - 1073073
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||    
T  1073195 agaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactca 1073096  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  1073095 ttcaatttttacctctccaatgg 1073073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 9117772 - 9117896
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||| |||||||||| | ||||||||||  |||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||     
T  9117772 ttagaccatttataatggtaaaacaaattcaacaactctcaacacccactttttcaattttcaacactccatttcattttctctctcttaattcaacact 9117871  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  9117872 cattcaatttttacctctccaatgg 9117896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 170 - 285
Target Start/End: Complemental strand, 14152182 - 14152067
Alignment:
Q  170 gttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    |||||| ||| ||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14152182 gttagaacatgtacaatggttaaaaccattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacac 14152083  T
Q  270 ccattcaatttttacc 285  Q
    |||||||| |||||||    
T  14152082 ccattcaacttttacc 14152067  T

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Target: chr2; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 24997077 - 24997162
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24997077 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaat 24997162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 12854980 - 12855103
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| ||||||||| ||| ||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  12854980 ttagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacact 12855078  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  12855079 cattcaatttttacctctccaatgg 12855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 4296848 - 4296761
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4296848 ttcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaatttttacctctccaatgg 4296761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 30822660 - 30822573
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  30822660 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 30822573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 7763602 - 7763489
Alignment:
Q  171 ttagaccatttacaatggtaaaatacatt-caacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacac 269  Q
    ||||||||||||||||||||||| | ||| ||| |  |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7763602 ttagaccatttacaatggtaaaaaaaatttcaatacgcttcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcaacac 7763503  T
Q  270 ccattcaattttta 283  Q
    ||||||||||||||    
T  7763502 ccattcaattttta 7763489  T

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Target: chr2; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 8852054 - 8852141
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  8852054 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatttaatttttatctctccaatgg 8852141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 39490116 - 39490226
Alignment:
Q  184 aatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 283  Q
    |||||||||| |  ||||| | |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  39490116 aatggtaaaaaaatttcaatacccttcaacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaattttta 39490215  T
Q  284 cctctccaatg 294  Q
     ||||||||||    
T  39490216 tctctccaatg 39490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 496 - 623
Target Start/End: Complemental strand, 1072833 - 1072705
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga-nnnnnnnnctgtgtccaaatcaaatg 594  Q
    ||||||| |||||||||| |||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||         ||||||||||||||||||    
T  1072833 aaataaagactaaaactttaaaagaaaagctaatagaaagataataataagattaagagagtgaaaaacttgatttttttctctgtgtccaaatcaaatg 1072734  T
Q  595 atccaagtctctatttatagagaaaaaaa 623  Q
    |||||||||||||||||||||||||||||    
T  1072733 atccaagtctctatttatagagaaaaaaa 1072705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 17485812 - 17485900
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  17485812 ccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctctaatg 17485900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 17929369 - 17929245
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| | ||||||| ||| |  ||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17929369 ttagaccatgtgcaatggttaaaaattttcaatacccttcaacatccattttttcaattcccaacactccacatcattttctctctcataatttaacacc 17929270  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||| ||||||||||    
T  17929269 cattcaatttttacatctccaatgg 17929245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 36209576 - 36209464
Alignment:
Q  183 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 282  Q
    ||||||||||| |  ||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  36209576 caatggtaaaaaaatttcaatacccttcaacacctactttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaattttt 36209477  T
Q  283 acctctccaatgg 295  Q
    | |||||| ||||    
T  36209476 atctctcctatgg 36209464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 6362916 - 6363027
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| ||||||||| |||  |||||||||||  |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||    
T  6362916 agaccatgtacaatggttaaacccattcaacaacggtcaacatccactttttcaattcc-aacactctacatcattttctctctcttaattcaacactca 6363014  T
Q  273 ttcaatttttacc 285  Q
    ||||| |||||||    
T  6363015 ttcaacttttacc 6363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 13151573 - 13151473
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||| ||||||| ||||| |||||||||||    
T  13151573 cattcaacaacattcaacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctccaatg 13151474  T
Q  295 g 295  Q
    |    
T  13151473 g 13151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 37245498 - 37245585
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  37245498 ttcaacacccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 37245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 1308774 - 1308687
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||||||||| ||||||||||    
T  1308774 ttcaacatccactttttcaatttccaacactccacatcattttctctctcataatccaacacacatttaatttttacttctccaatgg 1308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 4279428 - 4279535
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacga 630  Q
    |||||||||||| ||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  4279428 aaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtcaaaatcaaatgatccaagtctctatttgtagagaaaaaaaatcacga 4279527  T
Q  631 attttggt 638  Q
    ||||||||    
T  4279528 attttggt 4279535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 503 - 623
Target Start/End: Original strand, 9118132 - 9118253
Alignment:
Q  503 cactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaag 601  Q
    ||||||||||| |||| ||| ||||||| |||| ||||||| | |||||||||||||||||||||          |||||||||||||||||||||||||    
T  9118132 cactaaaactttaaaataaaagctaatagaaagataataataatattaagagagtgaaaaacttggtttttttttctgtgtccaaatcaaatgatccaag 9118231  T
Q  602 tctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||||||    
T  9118232 tctctatttatagagaaaaaaa 9118253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 927968 - 927893
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  927968 ttcaacacccacttttttaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 927893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 7762914 - 7762810
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaatt 633  Q
    ||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  7762914 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaaatcacgaatt 7762815  T
Q  634 ttggt 638  Q
    |||||    
T  7762814 ttggt 7762810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 171 - 253
Target Start/End: Complemental strand, 38997372 - 38997290
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctc 253  Q
    |||||||||||||||||||  || |  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  38997372 ttagaccatttacaatggttgaaaagtttcaacaaccttcaacacccactttttcaattcgcaacacaccacatcattttctc 38997290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 17928894 - 17928833
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  17928894 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatcacgaattttggt 17928833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 9074293 - 9074214
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  9074293 ccacttttttaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 9074214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 38901717 - 38901804
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||| ||||| ||||||||||||    
T  38901717 ttcaacacacactttttcaattccaaacactccacatcattttctctctctt-attcaacactcgttcaacttttaccctctccaatgg 38901804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 5146790 - 5146711
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||    
T  5146790 ccttcaacacccatttttttaatttccaacactccacatcattttctctctctttattcaacactcatttaacttttacc 5146711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 7585223 - 7585161
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  7585223 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 7585161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 638
Target Start/End: Complemental strand, 926594 - 926478
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttata--gagaaaaa 621  Q
    ||||||| |||| ||||||| ||||||||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||  ||||||||    
T  926594 gctaatagaaagataataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagagagaaaaa 926495  T
Q  622 aaattacgaattttggt 638  Q
    |||| | ||||||||||    
T  926494 aaatcatgaattttggt 926478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 12858218 - 12858334
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaa 621  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12858218 gctaatagaaagataataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaa 12858317  T
Q  622 aaattacgaattttggt 638  Q
    |||| | ||||||||||    
T  12858318 aaatcatgaattttggt 12858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 638
Target Start/End: Complemental strand, 30819411 - 30819295
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaa 621  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||||||    
T  30819411 gctaatagaaagataataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaa 30819312  T
Q  622 aaattacgaattttggt 638  Q
    |||| | ||||||||||    
T  30819311 aaatcatgaattttggt 30819295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 31193060 - 31192973
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||| ||||| ||||||||||||    
T  31193060 ttcaacacctattttttcaatttccaacactccacatcattttctctctctt-attcaatactcattcaacttttaccctctccaatgg 31192973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 1987116 - 1987202
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    |||||||  |||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| ||||| |||||||||||    
T  1987116 ttcaacattcactttttcaattctcaacactccacatcattttctatctctt-attcaacactcattcaacttttaccctctccaatg 1987202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 577 - 636
Target Start/End: Complemental strand, 36855095 - 36855036
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttg 636  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  36855095 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttg 36855036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 1308370 - 1308310
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  1308370 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaa-aaaatcacgaattttggt 1308310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 578 - 623
Target Start/End: Complemental strand, 39432450 - 39432405
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39432450 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 39432405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 638
Target Start/End: Complemental strand, 2778834 - 2778775
Alignment:
Q  579 gtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||    
T  2778834 gtgtccaaatcaaataaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 2778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 4296342 - 4296295
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4296342 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 4296295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 8855380 - 8855427
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8855380 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 8855427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 13151271 - 13151224
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13151271 ctgtgtcgaaatcaaatgatccaagtctctatttatagagaaaaaaaa 13151224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 39434088 - 39434002
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||| ||||| || ||| ||||| ||||||| ||||| |||||||||||    
T  39434088 ttcaacacccactttttcaatttccaacattccacatcattttttctct-tttattaaacactcattcaacttttatcctctccaatg 39434002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 1987525 - 1987587
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||    
T  1987525 ctgtgtccaaatcaaatgaaccaagtctctatttatagaggaaaaaaaatcatgaattttggt 1987587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 536 - 638
Target Start/End: Original strand, 6363729 - 6363831
Alignment:
Q  536 ctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaatttt 635  Q
    |||||||  |||||||||||||||||||||||         || | |||||||||||||||| ||||||||||| |||||| |||||||| |||||||||    
T  6363729 ctaataaaaagattaagagagtgaaaaacttggttttttttctatatccaaatcaaatgatcaaagtctctattcatagaggaaaaaaatcacgaatttt 6363828  T
Q  636 ggt 638  Q
    |||    
T  6363829 ggt 6363831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 622
Target Start/End: Complemental strand, 14151974 - 14151882
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn--ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaa 622  Q
    |||||||||||| ||||||||||||||||||||||||          |||||| |||||||||||||||| ||| ||||||||||||||||||    
T  14151974 aaagctaataataagattaagagagtgaaaaacttgattttttttttctgtgttcaaatcaaatgatccacgtcactatttatagagaaaaaa 14151882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 43494956 - 43494896
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||    
T  43494956 ctgtgtccaaatcaaatgaaccaagtctctatttataga-aaaaaaaatcatgaattttggt 43494896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 36855846 - 36855764
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatg 294  Q
    |||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||||||| ||||||| ||||| |||||||||||    
T  36855846 aacaccca-tttttcaattcccaacactccccattattttttctctctt-attcaacactcattcaacttttaccctctccaatg 36855764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 6333465 - 6333402
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctta 260  Q
    |||||||||| ||||||| |||||||||||||||| || | |||| ||||||||||||||||||    
T  6333465 attcaacaacattcaacatccactttttcaattcctaatattccatatcattttctctctctta 6333402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 616
Target Start/End: Complemental strand, 9072660 - 9072621
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag 616  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9072660 ctgtgtccaaatcaaatgatccaagtctctatttatagag 9072621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 31184974 - 31184915
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaattacgaattttggt 638  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||    
T  31184974 tgtccaaatcaaatgaaccaagtctctatttatagagagaaaaaaatcatgaattttggt 31184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 36209151 - 36209104
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  36209151 ctgtgtctaaatcaaatgatccaagtctctatttgtagagaaaaaaaa 36209104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 37246035 - 37246082
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  37246035 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaa 37246082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 5145059 - 5144998
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaatt-acgaattttggt 638  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||    
T  5145059 ctgtgtccaaatcaaatgatccaagtctcta-ttgtagagaataaaaattcacgaattttggt 5144998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 31174253 - 31174186
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    ||||||||||||||||||||||||||||| | ||| |||||||| ||||||||| ||||||| |||||||    
T  31174253 ccactttttcaattcccaacactccacatta-tttatctctctt-attcaacactcattcaacttttacc 31174186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 2780805 - 2780738
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||||||||||| |||| || ||||||||||||||||||| |||||||||| ||| || ||||||    
T  2780805 ccactttttcaattcctaacattctacatcattttctctctctt-attcaacacctatttaacttttac 2780738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 624
Target Start/End: Complemental strand, 31204700 - 31204656
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  31204700 tgtccaaatcaaatgaaccaagtctctatttacagagaaaaaaaa 31204656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 6332988 - 6332924
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatag---agaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| |||| |||||||||||||   | ||||||||||| ||||||||||    
T  6332988 ctgtgtccaaatcaaatgaaccaaatctctatttataggtaaaaaaaaaaattatgaattttggt 6332924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 16218950 - 16218900
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctctt 259  Q
    |||||| ||||||||||  ||||||||||||||| || |||||||||||||    
T  16218950 tcaacatccactttttcttttcccaacactccacgtctttttctctctctt 16218900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Complemental strand, 13151226 - 13151169
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | |||||||||||||||||| |||| |||||  ||||||||| ||||    
T  13151226 aaaattatttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagc 13151169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 567
Target Start/End: Complemental strand, 43495035 - 43494974
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg 567  Q
    |||||||||||||||||  |||||| |||| ||||||| | | ||||| |||||||||||||    
T  43495035 taaaacttcaaaagaaaacctaatagaaagataataataacaataagatagtgaaaaacttg 43494974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 44280357 - 44280394
Alignment:
Q  531 caaagctaataatgagattaagagagtgaaaaacttga 568  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  44280357 caaatctaataataagattaagagagtgaaaaacttga 44280394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 5e-58; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 34838541 - 34838663
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34838541 agaccatttacaatggtaaaatacattcaataaccttcaacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 34838640  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  34838641 ttcaatttttacctctccaatgg 34838663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 8660517 - 8660641
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8660517 ttagaccatttacaattgtaaaacccattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaca 8660616  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  8660617 cattcaatttttacctctccaatgg 8660641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 8669848 - 8669972
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  8669848 ttagatcatttacaatggtaaaatacattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctcttaattcaacacc 8669947  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  8669948 cattcaatttttacctctccaatgg 8669972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 30446202 - 30446325
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30446202 ttagaccatttacaatggtaaaacaaattcaacaaccctcaacacccattttttcaattcctaacactccacatcattttctctctcttaattcaacacc 30446301  T
Q  271 cattcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||||    
T  30446302 cattcaatttttacctctccaatg 30446325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 10886540 - 10886683
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| |        |||||||||||||||||||    
T  10886540 aaataaacactaaaacttcaaaagaaaggctaatgcaaaactaataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatga 10886639  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  10886640 tccaagtctctatttatagagaaaaaaaaattacgaattttggt 10886683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 10883832 - 10883953
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||  || |  |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10883832 agaccatttacaatggttgaaaagtttcaacaaccctcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccca 10883931  T
Q  273 ttcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||    
T  10883932 ttcaatttttacctctccaatg 10883953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 24348391 - 24348515
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||| |||||||||  || |  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  24348391 ttagaccatatacaatggttgaaaattttcaataaccatcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacatc 24348490  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||| ||||||    
T  24348491 cattcaatttttacctcttcaatgg 24348515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 631513 - 631600
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  631513 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 631600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 12501790 - 12501913
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||| ||||||  || |  |||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  12501790 ttagaccatttataatggttgaaaagtttcaacaaccctcaccacccactttttcaattctcaacaatccacatcattttctctctcttaattcaacacc 12501889  T
Q  271 cattcaatttttacctctccaatg 294  Q
    ||||||||||||||||||| ||||    
T  12501890 cattcaatttttacctctctaatg 12501913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 34328276 - 34328363
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  34328276 ttcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 34328363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 197799 - 197885
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  197799 ttcaacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaatttttacatctccaatg 197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 12502210 - 12502353
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatg 594  Q
    ||||||| ||||||||||||||||||| ||||||  |||| ||||||| |||||||||||||||||||||||          ||||||||||||||||||    
T  12502210 aaataaagactaaaacttcaaaagaaaagctaatggaaagttaataataagattaagagagtgaaaaacttggtttttttttctgtgtccaaatcaaatg 12502309  T
Q  595 atccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    || |||||||||||||||||||||||||||| ||||| ||||||    
T  12502310 attcaagtctctatttatagagaaaaaaaatcacgaactttggt 12502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 17961340 - 17961253
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  17961340 ttcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacaaacatacaatttttacctctccaatgg 17961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 12513327 - 12513469
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||| ||| ||||||  |||| ||||||| |||||||||||||||||||||||         |||||||||||||||||||    
T  12513327 aaataaagactaaaacttcaaaataaaagctaatggaaagttaataataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatga 12513426  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    || ||||||||||||||||||||||||||| |  |||||||||    
T  12513427 tcaaagtctctatttatagagaaaaaaaataattaattttggt 12513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 12512898 - 12512994
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    |||||||||| | |||| ||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12512898 ttcaacaaccctgaacatccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaatttttacctctccaatg 12512994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 30446564 - 30446710
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga---nnnnnnnnctgtgtccaaatcaaa 592  Q
    ||||||| ||||||||||||||||||| | ||||| | |||||||||| ||||||||||||||||||||||||           ||||||| ||||||||    
T  30446564 aaataaagactaaaacttcaaaagaaaagttaatagatagctaataataagattaagagagtgaaaaacttgatttttttttttctgtgtcaaaatcaaa 30446663  T
Q  593 tgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  30446664 tgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 30446710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 505 - 638
Target Start/End: Original strand, 8222422 - 8222558
Alignment:
Q  505 ctaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg--annnnnnnnctgtgtccaaatcaaatgatccaagt 602  Q
    |||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||           ||||||||||||||||||||||||||    
T  8222422 ctaaaacttcaaaagaaaagctaatagaaagttaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagt 8222521  T
Q  603 ctctatttatagag-aaaaaaaattacgaattttggt 638  Q
     ||||||||||||| ||||||||| ||||||||||||    
T  8222522 atctatttatagagaaaaaaaaatcacgaattttggt 8222558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 12480275 - 12480384
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||||  || |  |||||||||| |||||| |||||||||||||| | ||||||| ||||||||||||| ||||||||||||||||    
T  12480275 ttagaccatttacaatggttgaaaagtttcaacaaccctcaacatccactttttcaatttcaaacactctacatcattttctcactcttaattcaacacc 12480374  T
Q  271 cattcaattt 280  Q
    ||||||||||    
T  12480375 cattcaattt 12480384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 26654411 - 26654327
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||| ||||||||||||| |||||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26654411 tcaacacctactttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacctctccaat 26654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 26760381 - 26760297
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||| ||||||||||||| |||||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26760381 tcaacacctactttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacctctccaat 26760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 8668817 - 8668878
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8668817 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaatcacgaattttggt 8668878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 6380557 - 6380478
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  6380557 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacacacattcaacttttaccctctccaatgg 6380478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 29428594 - 29428519
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  29428594 ttcaacatccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 29428519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 8218964 - 8219027
Alignment:
Q  232 caacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8218964 caacactccacattattttctctctcttaattcaacacccattcaacttttacctctccaatgg 8219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 22627796 - 22627899
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||    | |||||||||||  ||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||||| |||    
T  22627796 agaccatttacaatggtttttttcattcaacaacactcaacacccacgttttcaatttccaacactccacatcattttctctct-tttattcaacatcca 22627894  T
Q  273 ttcaa 277  Q
    |||||    
T  22627895 ttcaa 22627899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 6725700 - 6725626
Alignment:
Q  209 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac 284  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  6725700 tcaacacccactttttctcttcccaacactccacatcattttctctctctt-attcaacactcattcaacttttac 6725626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 26653888 - 26653783
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa--aaaattacgaat 632  Q
    ||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||    
T  26653888 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaaatcacgaat 26653789  T
Q  633 tttggt 638  Q
    ||||||    
T  26653788 tttggt 26653783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 26759857 - 26759752
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa--aaaattacgaat 632  Q
    ||||||||| ||||||||||||||||||| ||||        |||||||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||    
T  26759857 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaaatcacgaat 26759758  T
Q  633 tttggt 638  Q
    ||||||    
T  26759757 tttggt 26759752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 34841858 - 34841920
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  34841858 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 34841920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 198208 - 198269
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  198208 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 29951764 - 29951703
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  29951764 ctgtgtccaaatcaaatgatctaagtctctatttatagagaaaaaaaatcatgaattttggt 29951703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 635009 - 635125
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaa 621  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||||||    
T  635009 gctaatagaaagataataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaa 635108  T
Q  622 aaattacgaattttggt 638  Q
    |||| | ||||||||||    
T  635109 aaatcatgaattttggt 635125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 24933361 - 24933271
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca--atttttacctctccaatgg 295  Q
    ||||||||| ||| |||||||||| | |||||||||||| |||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  24933361 ccttcaacatccattttttcaatttc-aacactccacattattttctctctcataattcaacactcattcaatatttttacctctccaatgg 24933271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 210 - 293
Target Start/End: Original strand, 32359743 - 32359826
Alignment:
Q  210 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaat 293  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||    
T  32359743 caacactcaatttttcaattcccaacattccacatcattttctctctctt-attcaacactcattccatttttaccctctccaat 32359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 6377170 - 6377108
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  6377170 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 6377108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 17958038 - 17957976
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  17958038 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 17957976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 24348859 - 24348921
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  24348859 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaaatcacgaattttggt 24348921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 2503264 - 2503307
Alignment:
Q  252 tctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2503264 tctctcttaattcaacacccattcaatttttacctctccaatgg 2503307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 2503726 - 2503773
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2503726 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 2503773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 34328781 - 34328828
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34328781 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 34328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 34242232 - 34242298
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactc 239  Q
    |||||||||||||||||  || || |||||||||| ||||||| |||||||||||||||||||||||    
T  34242232 agaccatttacaatggttcaaaactttcaacaaccctcaacactcactttttcaattcccaacactc 34242298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 624
Target Start/End: Original strand, 32360076 - 32360176
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa 623  Q
    ||||||| |||| ||||||| ||||||||| |||||||||||||         |||||||||||||||||||  |||||||||||||||| ||| |||||    
T  32360076 gctaatagaaagataataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaatcaagtctctatttataaagagaaaaa 32360175  T
Q  624 a 624  Q
    |    
T  32360176 a 32360176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 34242743 - 34242849
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacga 630  Q
    |||||||||||| ||||||||||||||||||| |||          |||||||||||||||||||||||| ||||||||| ||||  |||||||| ||||    
T  34242743 aaagctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaaatctctatttgtaga-taaaaaaatcacga 34242841  T
Q  631 attttggt 638  Q
    ||||||||    
T  34242842 attttggt 34242849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 6725362 - 6725300
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||||    
T  6725362 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 6725300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 7541324 - 7541384
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||||| | ||||||||||    
T  7541324 ctgtgtccaaatcaaatgaaccaaatctctatttataga-aaaaaaaatcatgaattttggt 7541384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 553
Target Start/End: Original strand, 24115358 - 24115407
Alignment:
Q  504 actaaaacttcaaaagaaaggctaatacaaagctaataatgagattaaga 553  Q
    ||||||| ||||||||||| ||||||| |||||||||||| |||||||||    
T  24115358 actaaaagttcaaaagaaaagctaatagaaagctaataataagattaaga 24115407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 655 - 708
Target Start/End: Complemental strand, 26653763 - 26653710
Alignment:
Q  655 ttatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | ||||||||||||||| || |||| |||||||||||||||||||||    
T  26653763 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagc 26653710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 708
Target Start/End: Complemental strand, 26759722 - 26759678
Alignment:
Q  664 atgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||||||| || |||| |||||||||||||||||||||    
T  26759722 atgaaataattgagtccaaattattaagaaaataaaaatccaagc 26759678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 34242343 - 34242387
Alignment:
Q  250 tctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||    
T  34242343 tctctctctctattcaacacccattcaattcttacctctccaatg 34242387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 8668896 - 8668953
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaag 707  Q
    ||||||||||| | ||||||||||||||| || | || |||||| |||||||||||||    
T  8668896 taaaattatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaag 8668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Original strand, 12502368 - 12502425
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | ||||||||||||||| || |||| |||||| | ||||||||||||    
T  12502368 aaaattatttgcaatgaaataattgagtccaaattattaagaataaaaaaatccaagc 12502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 2478439 - 2478317
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2478439 agaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccct 2478340  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  2478339 ttcaatttttacctctccaatgg 2478317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 45623301 - 45623158
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  45623301 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 45623202  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  45623201 tccaagtctctatttatagagaaaaaaaaattacgaattttggt 45623158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 496 - 754
Target Start/End: Complemental strand, 48384949 - 48384683
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||        ||| |||||||||||||||    
T  48384949 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaatgataagattaagagagtgaaaaacttgattttttttctgcgtccaaatcaaatga 48384850  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt-------nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattag 687  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||                   |||||||||| | ||||||||||||||| || ||||     
T  48384849 tccaagtctctatttatagagaaaaaaaaattacgaattttagtaaaaaaaaaaaaaaaaaaaaaaattatttgcaatgaaataattgagtccaaattat 48384750  T
Q  688 taagaaaataaaaatccaagctgtcaaacccataaggccatgtgacttgctttatccatttcctctc 754  Q
    |||||| |||||||||||||| | ||| | ||||| |||||||| ||||||||||||||||||||||    
T  48384749 taagaagataaaaatccaagcagccaatcacataatgccatgtgtcttgctttatccatttcctctc 48384683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 48388219 - 48388097
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48388219 agaccatttacaatggtaactaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 48388120  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  48388119 ttcaatttttacctctccaatgg 48388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 37691065 - 37690924
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  37691065 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttga-tttttttctgtgtccaaatcaaatga 37690967  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  37690966 tccaagtctctatttatagagaaaaaaatttacgaattttggt 37690924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 51494244 - 51494101
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  51494244 aaataaacactaaaacttcaaaagaaaggctaatacaaaactaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatga 51494145  T
Q  596 tccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  51494144 tccaagtctctatttatagagaaaaaaaaattacgaattttggt 51494101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 51494583 - 51494461
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||    
T  51494583 agaccatttacaatggtaaaatatattcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattca 51494484  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  51494483 ttcaatttttacctctccaatgg 51494461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 19578684 - 19578540
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttg--annnnnnnnctgtgtccaaatcaaat 593  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||           |||||||||||||||||    
T  19578684 aaataaacactaaaacttcaaaagaaaggctaatacaaaactaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaat 19578585  T
Q  594 gatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19578584 gatccaagtctctatttatagagaaaaaaaattacgaattttggt 19578540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 496 - 635
Target Start/End: Original strand, 29919669 - 29919809
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||        |||||| ||||||||||||    
T  29919669 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaatttgattttttttctgtgttcaaatcaaatga 29919768  T
Q  596 tccaagtctctatttatagaga-aaaaaaattacgaatttt 635  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  29919769 tccaagtctctatttatagagagaaaaaaattacgaatttt 29919809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 36230319 - 36230437
Alignment:
Q  177 catttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca 276  Q
    ||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  36230319 catttacaatggttaaacacattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacacccattca 36230418  T
Q  277 atttttacctctccaatgg 295  Q
    |||||||||||||||||||    
T  36230419 atttttacctctccaatgg 36230437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 23092727 - 23092848
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||| |||||| |||||| | || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23092727 agaccatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacgtcattttctctctcttaattcaacaccca 23092826  T
Q  273 ttcaatttttacctctccaatg 294  Q
    |||| |||||||||||||||||    
T  23092827 ttcagtttttacctctccaatg 23092848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 48404288 - 48404409
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||||||||||||| | | | ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  48404288 agaccatttacaatggtcacaaatattcaacaaccctcaacaccaactttttcaattcccaacactccacatcattttctctctcttaattcaacactca 48404387  T
Q  273 ttcaatttttacctctccaatg 294  Q
    ||||||||||||||||||||||    
T  48404388 ttcaatttttacctctccaatg 48404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 496 - 754
Target Start/End: Original strand, 31159733 - 31159989
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||    
T  31159733 aaataaacactaaaacttcaaaagaaatgctaatacaaagctaataataagattaagagagtgaaaaacttga-tttttttctgtgtccaaatcaaatga 31159831  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt-nnnnnnnnnnntaaaattatttaccatgaaataattgagttcatattagtaagaaa 694  Q
    ||||||||||||  || ||| ||||||||||||||||||||||            |||||| |||| | |||||||||||| || || |||| ||||||     
T  31159832 tccaagtctcta--tagaga-aaaaaaaattacgaattttggtaaaaaaataaaataaaataatttgcaatgaaataattgggtccaaattattaagaag 31159928  T
Q  695 ataaaaatccaagctgtcaaacccataaggccatgtgactt-gctttatccatttcctctc 754  Q
    |||||||||||||| | ||| | ||||| |||||||| |||  ||||||||||||||||||    
T  31159929 ataaaaatccaagcagccaatcacataatgccatgtgtcttccctttatccatttcctctc 31159989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 14096647 - 14096769
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||| |||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||     
T  14096647 ttagatcatttacaatggcaaaatatattcaacaatcttcaacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacact 14096746  T
Q  271 cattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||    
T  14096747 cattcaatttttacctctccaat 14096769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 31159345 - 31159467
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||  || |  |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31159345 agaccatttacaatggttgaaaagtttcaacaaccctcaacatctactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 31159444  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  31159445 ttcaatttttacctctccaatgg 31159467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 14096987 - 14097131
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga--nnnnnnnnctgtgtccaaatcaaat 593  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||    
T  14096987 aaattaacactaaaacttcaaaagaaaggctaatacaaagctaataataagattaagagagtgaaaaacttgattttttttttctgtgtccaaatcaaat 14097086  T
Q  594 gatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
     ||| |||||||||||||||||||||||||||||| |||||||||    
T  14097087 aatcaaagtctctatttatagagaaaaaaaattacaaattttggt 14097131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 45456262 - 45456140
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||||  || |  ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  45456262 agaccatttacaatggttgaaaattttcaataaccctcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactca 45456163  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||    
T  45456162 ttcaatttttacctctccaatgg 45456140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 29919326 - 29919451
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    |||||||||||||||||| |||||| ||||||||| | |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29919326 ttagaccatttacaatggcaaaatatattcaacaaacctcaacatctactttttcaattcccaacactccatatcattttctctctcttaattcaacacc 29919425  T
Q  271 cattcaa-tttttacctctccaatgg 295  Q
     |||||| ||||||||||||||||||    
T  29919426 tattcaattttttacctctccaatgg 29919451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 29523686 - 29523782
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  29523686 ttcaacacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacatctccaatg 29523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 30878630 - 30878535
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30878630 ttcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaatttttacctctccaat 30878535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 8468280 - 8468398
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||||||||   |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8468280 ttagaccattgtaaatggttaaaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaca 8468379  T
Q  271 cattcaatttttacctctc 289  Q
    |||| || |||||||||||    
T  8468380 catttaacttttacctctc 8468398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 10265804 - 10265660
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||  ||||        |||||||||||||||||||    
T  10265804 aaataaagactaaaacttcaaaagaaaagctaatagaaagctaataataagattaagagagtgaaaattttgattttttttctgtgtccaaatcaaatga 10265705  T
Q  596 tccaagtctctatttatagagaaaaaa--aattacgaattttggt 638  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||    
T  10265704 tccaagtctctatttatagagaaaaaaataatcacgaattttggt 10265660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 204 - 293
Target Start/End: Complemental strand, 19578990 - 19578901
Alignment:
Q  204 aaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19578990 aaccctcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 19578901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 45239131 - 45239218
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  45239131 ttcaacacccactttttcaattcccaacactccacatcattttctctctctttattcaacactcattcaatttttacctctccaatgg 45239218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 496 - 638
Target Start/End: Complemental strand, 17676114 - 17675973
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||| |||          ||||||||||||||||||    
T  17676114 aaataaagactaaaacttcaaaagaaaagctaatggaaagctaataataagattaagagagtgaaaaatttggtttttttt-tgtgtccaaatcaaatga 17676016  T
Q  596 tccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  17676015 tccaagtctctatttatagagaaaaaaaatcacgaattttggt 17675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 45623641 - 45623519
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||| |||||| ||||||||||  |||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  45623641 agaccatttacaatggcaaaatatattcaacaactctcaacatctactttttcaattcctaacactccacatcattttctctctcttaattcaacactca 45623542  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    || |||||||| |||||| ||||    
T  45623541 tttaatttttatctctcctatgg 45623519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 31468126 - 31468211
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  31468126 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaatttttacctctccaat 31468211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 37691402 - 37691279
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacc 270  Q
    ||||| |||||||||||| ||| || ||||||||| | ||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  37691402 ttagatcatttacaatggcaaa-tatattcaacaatcctcatcattcactttttcaattcccaacactccacattattttctctctcttaattcaacatc 37691304  T
Q  271 cattcaatttttacctctccaatgg 295  Q
    |||||||||||||||||||||||||    
T  37691303 cattcaatttttacctctccaatgg 37691279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 27630536 - 27630449
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  27630536 ttcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 27630449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 37420420 - 37420333
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  37420420 ttcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 37420333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 37646633 - 37646550
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37646633 aacacctacttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 37646550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 37822525 - 37822649
Alignment:
Q  171 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctct-ctcttaattcaacac 269  Q
    |||||||||||||||||||  || |  ||||| |||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  37822525 ttagaccatttacaatggttgaaaattttcaataaccctgaacactcactttttcaattctcaacactccacatcattttctctcctcttaattcaacac 37822624  T
Q  270 ccattcaatttttacctctccaatg 294  Q
     ||||||||||||||||||||||||    
T  37822625 tcattcaatttttacctctccaatg 37822649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 624
Target Start/End: Original strand, 48407670 - 48407800
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga--nnnnnnnnctgtgtccaaatcaaat 593  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||          |||||| ||||||||||    
T  48407670 aaataaagactaaaacttcaaaagaaaagctaatacaaagttaataataagattaagagagtgaaaaacttgattttttttttctgtgttcaaatcaaat 48407769  T
Q  594 gatccaagtctctatttatagagaaaaaaaa 624  Q
    ||| |||||||||||||||||||||||||||    
T  48407770 gattcaagtctctatttatagagaaaaaaaa 48407800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 43739367 - 43739473
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaa 631  Q
    |||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  43739367 aaagctaataataagattaagagagtgaaaaacttgatttttttcctgtgtccaaatcaaatgattcaagtctctatttatagagaaaaaaaatcacgaa 43739466  T
Q  632 ttttggt 638  Q
    |||||||    
T  43739467 ttttggt 43739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 35847199 - 35847117
Alignment:
Q  206 ccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctct 288  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35847199 ccttcaacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaatttttacctct 35847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 51156416 - 51156313
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattt 634  Q
    |||||| || |||||||||||||||||||  |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51156416 gctaattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattt 51156317  T
Q  635 tggt 638  Q
    ||||    
T  51156316 tggt 51156313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 8464092 - 8464179
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  8464092 ttcaacatccactttttcaattctcaacactccacatcattttctctctctt-attcaacactcattcaatttttactctctccaatgg 8464179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 577 - 706
Target Start/End: Original strand, 29524285 - 29524413
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattga 676  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||           ||||||||||| | |||||||||||||    
T  29524285 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatcacgaattttggt-aaaaataaaataaaattatttgcaatgaaataattga 29524383  T
Q  677 gttcatattagtaagaaaataaaaatccaa 706  Q
    || || |||| |||||| ||||||||||||    
T  29524384 gtccaaattattaagaagataaaaatccaa 29524413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 33164408 - 33164491
Alignment:
Q  211 aacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    |||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  33164408 aacacccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaatttttacatctccaatg 33164491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 44651057 - 44651153
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  44651057 ttcaacaccattcaacacc-actttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 44651153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 44334282 - 44334369
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||||    
T  44334282 ttcaacatccactttttcaattctcaacactccacatcattttctctctctt-attcaacactcattcaacttttactctctccaatgg 44334369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 44451338 - 44451259
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  44451338 ccactttttcaattcccaacactccacatcattttctctctctt-attcaacactcattcaacttttaccctctccaatgg 44451259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 17783370 - 17783457
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||||    
T  17783370 ttcaacatccacttttttaattcccaacattccacatcattttctctctctt-attcaacactcattcaacttttactctctccaatgg 17783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 537 - 638
Target Start/End: Original strand, 33167556 - 33167659
Alignment:
Q  537 taataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaaattacgaattt 634  Q
    ||||||| ||||||||||||||||||| ||||        |||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  33167556 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgattcaagtctctatttatagaggaaaaaaaaatcacgaattt 33167655  T
Q  635 tggt 638  Q
    ||||    
T  33167656 tggt 33167659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 51156999 - 51156877
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccacttttt-caattcccaacactccacatcattttctctctcttaattcaacaccc 271  Q
    ||||||| |||||||| |||| |  ||||| | |||||||||| |||||||| |||||  ||||||||||  |||||||||||||| ||||| |||||||    
T  51156999 agaccatgtacaatgggaaaaaattttcaatacccttcaacactcacttttttcaattttcaacactccatgtcattttctctctcataatttaacaccc 51156900  T
Q  272 attcaatttttacctctccaatgg 295  Q
    |||||| |||||||||||||||||    
T  51156899 attcaa-ttttacctctccaatgg 51156877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 2474813 - 2474751
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa-aaaattacgaattttggt 638  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2474813 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 2474751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 3755128 - 3755019
Alignment:
Q  184 aatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 283  Q
    |||||||||| |||||||||| | |||| || ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||  || |||| |||||    
T  3755128 aatggtaaaaaacattcaacaccattcagcatccactttttcaattctcaacactctacatcattttctctctctt-attcaacattcaatcaactttta 3755030  T
Q  284 -cctctccaat 293  Q
     ||||||||||    
T  3755029 ccctctccaat 3755019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 47300561 - 47300487
Alignment:
Q  220 tttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 294  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||| | |||||||    
T  47300561 tttttcaattctcagcactccacatcattttctctcttttaattcaacacacattcaatttttacttttccaatg 47300487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 41542313 - 41542408
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||  || ||||||| ||||| ||||||||||||    
T  41542313 ttcaacatcattcaacatccactttttcaattcccaacactccacatcatattctctctctt-attca--actcattcaacttttatcctctccaatgg 41542408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 637
Target Start/End: Original strand, 45242379 - 45242494
Alignment:
Q  524 gctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaa 621  Q
    ||||||| |||| ||||||| |||| |||| ||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||||||    
T  45242379 gctaatagaaagataataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaa 45242478  T
Q  622 aaattacgaattttgg 637  Q
    |||| | |||||||||    
T  45242479 aaatcatgaattttgg 45242494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 577 - 714
Target Start/End: Original strand, 45363862 - 45363998
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa--attacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataatt 674  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||           |||||  |||| | |||||||||||    
T  45363862 ctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatatcacgaattttggt-aaaaataaaataaaa--atttgctatgaaataatt 45363958  T
Q  675 gagttcatattagtaagaaaataaaaatccaagctgtcaa 714  Q
    ||||||| |||| |||||| |||||||||||||| |||||    
T  45363959 gagttcaaattattaagaagataaaaatccaagcagtcaa 45363998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 643540 - 643494
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  643540 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 643494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 37646125 - 37646067
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  37646125 tgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 37646067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 643890 - 643830
Alignment:
Q  216 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaa 277  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  643890 ccactttttcaattcccaacactccacgtcattttctctctctt-attcaacactcattcaa 643830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 8464948 - 8465009
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | | ||||||||||    
T  8464948 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaattcatgaattttggt 8465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 578 - 638
Target Start/End: Original strand, 37822984 - 37823045
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  37822984 tgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaaatcacgaattttggt 37823045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 43738940 - 43739053
Alignment:
Q  175 accatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 274  Q
    ||||||||| ||||| ||| |||||||||||| |||| ||  || ||||||||||  |||||||| || | ||||| ||||| ||||||||||||  |||    
T  43738940 accatttacgatggttaaacacattcaacaactttcagcattcattttttcaattttcaacactctacgttattttttctcttttaattcaacacttatt 43739039  T
Q  275 caatttttacctct 288  Q
    ||||||||||||||    
T  43739040 caatttttacctct 43739053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 52930383 - 52930322
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  52930383 ctgtgttcaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 52930322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 52933833 - 52933757
Alignment:
Q  219 ctttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||||||||||    
T  52933833 ctttttcaattcctaacactccacgtcattttctctctctt-attcaacactcattcaacttttacactctccaatgg 52933757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 52941468 - 52941392
Alignment:
Q  219 ctttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttac-ctctccaatgg 295  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||||||||||    
T  52941468 ctttttcaattcctaacactccacgtcattttctctctctt-attcaacactcattcaacttttacactctccaatgg 52941392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 8471594 - 8471657
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttat--agagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||    
T  8471594 ctgtgtccaaatcaaatgatccaagtctctatttatagagagagaaaaaatcacgaattttggt 8471657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 20584939 - 20584875
Alignment:
Q  196 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctta 260  Q
    ||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  20584939 cattcaacaaaactcaacacacactttttcaattcccaacactccacatcattttctcactctta 20584875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 568
Target Start/End: Original strand, 41542616 - 41542680
Alignment:
Q  504 actaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttga 568  Q
    ||||||||||||||||||| ||||||| |||| ||||||||| ||||||| ||||||||||||||    
T  41542616 actaaaacttcaaaagaaaagctaatagaaagataataatgatattaagatagtgaaaaacttga 41542680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 17681350 - 17681256
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactcc-acatcattttctctctct--taattcaacacccattcaatttttacctct 288  Q
    |||||||||||||||||| ||| ||||||||||  ||||||||  ||||||||||||||||||  |  ||||||| |||||||||||||||||||    
T  17681350 attcaacaaccttcaacatccagtttttcaattatcaacactcagacatcattttctctctctcttggttcaacatccattcaatttttacctct 17681256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 27630031 - 27629984
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27630031 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 27629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 31471569 - 31471616
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31471569 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 31471616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 708
Target Start/End: Original strand, 36231305 - 36231435
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaatt-acgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattg 675  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||            |||||||||| | ||||||||||||    
T  36231305 ctgtgtccaaatcaaatgatccaagtctctatttatatagaaaaaaaaatcatgaattttggtaaaaaaaata--aaaattatttgcaatgaaataattg 36231402  T
Q  676 agttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||| | || |||||  ||||||||||||||    
T  36231403 agttcaaaatattaagatgataaaaatccaagc 36231435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 638
Target Start/End: Original strand, 36303405 - 36303538
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    |||||||||||||||||  |||||| || | ||||||| ||||||||| ||||||||||||||         ||||||||||| |||||| ||||||| |    
T  36303405 taaaacttcaaaagaaaaactaatagaaggataataataagattaagatagtgaaaaacttgattttttttatgtgtccaaattaaatgaaccaagtc-c 36303503  T
Q  606 tatttatagag--aaaaaaaattacgaattttggt 638  Q
    |||||||||||  ||||||||| | ||||||||||    
T  36303504 tatttatagaggaaaaaaaaatcatgaattttggt 36303538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 37419915 - 37419868
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37419915 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 37419868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 44450953 - 44450894
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa-attacgaattttggt 638  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  44450953 tgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaatattatgaattttggt 44450894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 44651459 - 44651518
Alignment:
Q  580 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaa-attacgaattttggt 638  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  44651459 tgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaatattatgaattttggt 44651518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 45362680 - 45362771
Alignment:
Q  177 catttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaaca 268  Q
    ||||||| ||| ||||| |  ||||| | ||||||||||||| ||||||||||| |||||||||| |||| ||||||||| |||||||||||    
T  45362680 catttactatgctaaaaaattttcaatacccttcaacacccattttttcaattctcaacactccaaatcactttctctctattaattcaaca 45362771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 638
Target Start/End: Original strand, 51523649 - 51523711
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttataga--gaaaaaaaattacgaattttggt 638  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  51523649 tgtgtctaaatcaaatgatccaagtctctatttatagagggaaaaaaaatcacgaattttggt 51523711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 51520221 - 51520298
Alignment:
Q  219 ctttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    |||||||||||  ||||||||||||||||||| |||||||||||| |||||  |||||| ||||| ||||||||||||    
T  51520221 ctttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctccaatgg 51520298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 536 - 624
Target Start/End: Complemental strand, 30878363 - 30878276
Alignment:
Q  536 ctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| || ||||| ||||    
T  30878363 ctaataataagattaagagagtgaaaaacttg-gtttttttctgtgtccaaatcaaatgatccaagtctctatttgtaaagaaagaaaa 30878276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 17786627 - 17786674
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  17786627 ctgtgtacaaatcaaatgaaccaagtctctatttatagagaaaaaaaa 17786674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 624
Target Start/End: Complemental strand, 47297326 - 47297233
Alignment:
Q  532 aaagctaataatgagattaagagagtgaaaaacttgannnnnnnn-ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||| ||||||||||||||||||| |||          |||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  47297326 aaagctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatgaaatgattcaagtctctatttatagataaaaaaaa 47297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 506 - 638
Target Start/End: Original strand, 48729745 - 48729876
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    |||||||||||||||||  |||||| || | |||| || ||||||||| ||||||||||||||         ||||||||||| |||||| ||||||| |    
T  48729745 taaaacttcaaaagaaaaactaatagaaggataatgataagattaagatagtgaaaaacttgattttttta-tgtgtccaaattaaatgaaccaagtc-c 48729842  T
Q  606 tatttataga-gaaaaaaaattacgaattttggt 638  Q
    |||||||||| |||||||||| | ||||||||||    
T  48729843 tatttatagaggaaaaaaaatcatgaattttggt 48729876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 36302975 - 36303062
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| ||| ||||||||||  ||||||||||||| ||||||||| |||| |||||||||  |||||| ||||| ||||||||||||    
T  36302975 ttcaacatccattttttcaattttcaacactccacattattttctctttctt-attcaacacatattcaacttttaccctctccaatgg 36303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 44929366 - 44929279
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| ||| ||||||||||| ||||| | || |||||||||||||| || ||||||||| ||||||| ||||| ||||||||||||    
T  44929366 ttcaacatccattttttcaattctcaacatttcaaatcattttctctct-tttattcaacactcattcaacttttaccctctccaatgg 44929279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 48729315 - 48729402
Alignment:
Q  208 ttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta-cctctccaatgg 295  Q
    ||||||| ||| ||||||||||   |||||| ||||||||||||||| |||| ||||||||| ||||||| ||||| ||||||||||||    
T  48729315 ttcaacatccattttttcaatttttaacacttcacatcattttctctttctt-attcaacacacattcaacttttaccctctccaatgg 48729402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 625
Target Start/End: Original strand, 48927257 - 48927305
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaat 625  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  48927257 ctgtgtccaaatcaaatgaaccaagcctctatttatagaaaaaaaaaat 48927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 20584511 - 20584464
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  20584511 ctgtgtcaaaatcaaatgaaccaagtctctatttatagacaaaaaaaa 20584464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 624
Target Start/End: Complemental strand, 3754745 - 3754699
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||    
T  3754745 tgtgtccaaatcaaatgaaccaattctctatttatagacaaaaaaaa 3754699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 651 - 708
Target Start/End: Complemental strand, 47297207 - 47297150
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  47297207 aaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagc 47297150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 714
Target Start/End: Original strand, 37823061 - 37823125
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagctgtcaa 714  Q
    ||||||||||| | ||||||||||||||| || |||| |||||| ||||||||| |||| |||||    
T  37823061 taaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatctaagcagtcaa 37823125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 40500382 - 40500468
Alignment:
Q  197 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 285  Q
    |||||||| | || |||||||||||||||| |||| |||||| ||||| |||||||| ||||| ||||||||| |||| || |||||||    
T  40500382 attcaacatcatttaacacccactttttcagttccgaacacttcacat-attttctccctctt-attcaacactcatttaacttttacc 40500468  T

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Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 39149524 - 39149586
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaa-aattacgaattttggt 638  Q
    |||||| |||||||||||| | ||||||||||||||||| |||||| ||| | ||||||||||    
T  39149524 ctgtgttcaaatcaaatgaactaagtctctatttatagacaaaaaataatcatgaattttggt 39149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 624
Target Start/End: Original strand, 44334661 - 44334707
Alignment:
Q  578 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    |||||||||||||||||| |||| ||| |||||||||| ||||||||    
T  44334661 tgtgtccaaatcaaatgaaccaaatctttatttatagacaaaaaaaa 44334707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 708
Target Start/End: Complemental strand, 45455519 - 45455461
Alignment:
Q  650 taaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    ||||||||||| | ||||||||||||||| || |||| |||||| | ||||||||||||    
T  45455519 taaaattatttgcaatgaaataattgagtccaaattattaagaagaaaaaaatccaagc 45455461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 708
Target Start/End: Complemental strand, 2474732 - 2474675
Alignment:
Q  651 aaaattatttaccatgaaataattgagttcatattagtaagaaaataaaaatccaagc 708  Q
    |||||||||| | ||||||||||||||| || | || |||||| ||||||||||||||    
T  2474732 aaaattatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 2474675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 295
Target Start/End: Complemental strand, 10267035 - 10266949
Alignment:
Q  207 cttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 295  Q
    |||||||||| |||||||||||| ||| || | || |||||||| |||||  ||||| || |  ||||||||||||||||||| |||||    
T  10267035 cttcaacacctactttttcaatttccaccattacagatcattttttctct--taatttaatatacattcaatttttacctctctaatgg 10266949  T

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Target: scaffold0054 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 57854 - 57732
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||| |||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  57854 agaccatttataatggtcacaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 57755  T
Q  273 ttcaatttttacctctccaatgg 295  Q
    |||||||||||||||| ||||||    
T  57754 ttcaatttttacctcttcaatgg 57732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 55062 - 55141
Alignment:
Q  207 cttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctc 287  Q
    ||||| || ||| ||||||||||| ||||||||| ||||||||| | | |  |||||||||||||||| ||||||||||||    
T  55062 cttcatcatccattttttcaattctcaacactccgcatcatttt-ttttttgtaattcaacacccatttaatttttacctc 55141  T

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Target: scaffold0362 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 5434 - 5316
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    |||||||||||||||| |||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  5434 agaccatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacatcattttctctttcttaattcaacatcca 5335  T
Q  273 ttcaatttttacctctcca 291  Q
    |||||||||||||||||||    
T  5334 ttcaatttttacctctcca 5316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 90; Significance: 4e-43; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 496 - 638
Target Start/End: Original strand, 229 - 373
Alignment:
Q  496 aaataaacactaaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatga 595  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||        || ||||||||||||||||    
T  229 aaataaagactaaaacttcaaaagaaaagttaatacaaagctaataataagattaagagagtgaaaaacttgattttttttctttgtccaaatcaaatga 328  T
Q  596 tccaagtctctatttatagagaaaaa--aaattacgaattttggt 638  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    
T  329 tccaagtctctatttatagagaaaaaacaaattacgaattttggt 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 1166 - 1061
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagagaaaa--aaaattacgaat 632  Q
    ||||||||| | ||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||    
T  1166 gctaataataaaattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaaaatcacgaat 1067  T
Q  633 tttggt 638  Q
    ||||||    
T  1066 tttggt 1061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 66183 - 66063
Alignment:
Q  173 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 272  Q
    ||||||| |||||||| |||| |  ||||| | | || |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  66183 agaccatgtacaatgggaaaaaaatttcaataccttttaacacctactttttcaattctcaacactccacatcattttctctctcataattcaacactca 66084  T
Q  273 ttcaatttttacctctccaat 293  Q
    |||||||||||||||| ||||    
T  66083 ttcaatttttacctcttcaat 66063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 577 - 708
Target Start/End: Complemental strand, 109907 - 109781
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaattacgaattttggtnnnnnnnnnnntaaaattatttaccatgaaataattg 675  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||            ||||| |||| | ||||||||||||    
T  109907 ctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaatcacgaattttggtgaaaaa------aaaatcatttgcaatgaaataattg 109814  T
Q  676 agttcatattagtaagaaaataaaaatccaagc 708  Q
    ||| || |||| |||||| ||||||||||||||    
T  109813 agtccaaattattaagaagataaaaatccaagc 109781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 6409 - 6348
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaattacgaattttggt 638  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  6409 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaatcatgaattttggt 6348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 30639 - 30527
Alignment:
Q  183 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 282  Q
    ||||||| |||  ||||||||| | ||||||| ||||||||||||||| |||||||||| || |||||||||||||| |||||||||  |||||| ||||    
T  30639 caatggttaaacccattcaacaccattcaacatccactttttcaattctcaacactccatataattttctctctctt-attcaacacttattcaactttt 30541  T
Q  283 ac-ctctccaatgg 295  Q
    || |||||||||||    
T  30540 actctctccaatgg 30527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 506 - 624
Target Start/End: Original strand, 124349 - 124467
Alignment:
Q  506 taaaacttcaaaagaaaggctaatacaaagctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctc 605  Q
    ||||||||||||||||| | ||||| |||| ||||||| ||||||||| ||| |||||||||         | ||||||||||||||| | |||||||||    
T  124349 taaaacttcaaaagaaaagttaatagaaagataataataagattaagatagtaaaaaacttggatttttttcggtgtccaaatcaaataaaccaagtctc 124448  T
Q  606 tatttatagagaaaaaaaa 624  Q
    |||||||||| ||||||||    
T  124449 tatttatagataaaaaaaa 124467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 124001 - 124096
Alignment:
Q  198 ttcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc-tctccaatgg 295  Q
    ||||||| | ||||||| |||||||||||||| |||||||||||||||||||| ||||   | ||||||||| ||||||| ||||||| ||||||||||    
T  124001 ttcaacaccattcaacatccactttttcaatttccaacactccacatcattttttctc---ttattcaacactcattcaacttttaccatctccaatgg 124096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 617
Target Start/End: Original strand, 106173 - 106255
Alignment:
Q  535 gctaataatgagattaagagagtgaaaaacttgannnnnnnnctgtgtccaaatcaaatgatccaagtctctatttatagaga 617  Q
    |||||| || |||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||||||||    
T  106173 gctaattataagattaagagagtgaaaaatatgattttttttctgtgtgcaaatcaaatgatccaagtctctatttatagaga 106255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 26 - 73
Alignment:
Q  577 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaa 624  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||    
T  26 ctgtgtccaaatcaaatgaaccaagtatctatttatagacaaaaaaaa 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 170701 - 170661
Alignment:
Q  219 ctttttcaattcccaacactccacatcattttctctctctt 259  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  170701 ctttttcttttcccaacactccacatcattttctctctctt 170661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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