View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14141_high_3 (Length: 339)
Name: NF14141_high_3
Description: NF14141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14141_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 326
Target Start/End: Complemental strand, 18510554 - 18510247
Alignment:
| Q |
19 |
ttttagaatcacattcttctataaataacttaccaaatccattacatagtttcacaccaaaattattgaaatacaacaaaattattggtgaattatggtg |
118 |
Q |
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| T |
18510554 |
ttttagaatcacattcttctataaataacttaccaaatccattacatagtttcacaccaaaattattgaagtacaacaaaattattggtgaattatggtg |
18510455 |
T |
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| Q |
119 |
atgaaagaacataggaaattggtgtcactacttatggtggtagtaataatggcatctatgttgaaattttccaatggcatgagtctatgtaacatgaatg |
218 |
Q |
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| T |
18510454 |
atgaaagaacataggaaattggtgtcactacttatggtggtagtaataatggcatctatgttaaaattttccaatggcatgagtctatgtaacatgaatg |
18510355 |
T |
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| Q |
219 |
aagatggacttgatgcttgcaagccatcagtgactcagccaaatccagcaaaaccatccactgaatgctgtaaggctcttactggtgctgaccttcaatg |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18510354 |
aagatggacttgatgcttgcaagccatcagtgactcagccatatccagcaaaaccatccactgaatgctgtaaggctcttactggtgctgaccttcaatg |
18510255 |
T |
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| Q |
319 |
cctttgct |
326 |
Q |
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|||||||| |
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| T |
18510254 |
cctttgct |
18510247 |
T |
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