View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14141_high_5 (Length: 333)
Name: NF14141_high_5
Description: NF14141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14141_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 43901255 - 43900950
Alignment:
| Q |
18 |
aatcagaaacattttttgcatcatcagtggaacctaaaccatattctccatctgctccgccaattgaaagcaagactttgatccttttcatttggcaatt |
117 |
Q |
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| T |
43901255 |
aatcagaaacattttttgcatcatcagtggaacctaaaccatattctccatctgctccgccaattgaaagcaagactttgatccttttcatttggcaatt |
43901156 |
T |
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| Q |
118 |
cttaatgtgtgtgcttaacattgtgcaatcattggaagaagggtcacaatgatctgctaagttgatttcaggtgttgttccattcccaaatttgttaaga |
217 |
Q |
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| T |
43901155 |
cttaatgtgtgtgcttaacattgtgcaatcattggaagaagggtcacaatgatctgctaagttgatttcaggtgttgttccattcccaaatttgttaaga |
43901056 |
T |
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| Q |
218 |
aaagctatgattacataggagtagttgttgtagtttccttttgcacatgtttctgttagggtaccctcattgttattttgaccccaataaattgcaatgt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43901055 |
aaagctatgattacataggagtagttgttgtagtttccttttgcacatgtttctgttagggtaccctcattgttattttgaccccaataaattgcaatgt |
43900956 |
T |
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| Q |
318 |
tctctg |
323 |
Q |
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|||||| |
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| T |
43900955 |
tctctg |
43900950 |
T |
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