View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14142_high_10 (Length: 499)

Name: NF14142_high_10
Description: NF14142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14142_high_10
NF14142_high_10
[»] chr8 (9 HSPs)
chr8 (20-399)||(26872395-26872771)
chr8 (281-399)||(26875110-26875229)
chr8 (220-332)||(17663566-17663675)
chr8 (220-332)||(17682722-17682831)
chr8 (250-353)||(4838680-4838781)
chr8 (300-353)||(23091540-23091593)
chr8 (291-331)||(36577971-36578012)
chr8 (300-331)||(4836509-4836540)
chr8 (300-331)||(4841954-4841985)
[»] scaffold1896 (1 HSPs)
scaffold1896 (215-399)||(373-555)
[»] chr4 (10 HSPs)
chr4 (251-399)||(12997467-12997613)
chr4 (266-379)||(24923243-24923357)
chr4 (269-379)||(17141824-17141935)
chr4 (288-331)||(4749044-4749088)
chr4 (269-331)||(32215929-32215992)
chr4 (269-353)||(52296716-52296800)
chr4 (300-331)||(638078-638109)
chr4 (289-330)||(772287-772329)
chr4 (289-330)||(20866841-20866883)
chr4 (288-332)||(5405293-5405338)
[»] chr2 (18 HSPs)
chr2 (250-399)||(20622390-20622537)
chr2 (250-332)||(17686342-17686422)
chr2 (266-379)||(28479888-28480002)
chr2 (269-332)||(21851519-21851582)
chr2 (269-332)||(21859954-21860017)
chr2 (269-332)||(33308165-33308229)
chr2 (266-332)||(44373740-44373806)
chr2 (266-332)||(44389651-44389717)
chr2 (288-355)||(34543045-34543113)
chr2 (269-331)||(22186090-22186152)
chr2 (290-332)||(25262592-25262635)
chr2 (288-379)||(21149978-21150070)
chr2 (291-329)||(21322005-21322044)
chr2 (300-331)||(25193118-25193149)
chr2 (291-353)||(39756276-39756339)
chr2 (290-331)||(27425289-27425331)
chr2 (290-331)||(27440335-27440377)
chr2 (288-325)||(34529071-34529109)
[»] chr5 (8 HSPs)
chr5 (250-399)||(31422654-31422801)
chr5 (220-341)||(31411804-31411923)
chr5 (269-332)||(31549514-31549577)
chr5 (266-332)||(29185243-29185310)
chr5 (292-379)||(29189206-29189294)
chr5 (269-331)||(23568473-23568535)
chr5 (300-331)||(2826874-2826905)
chr5 (309-379)||(24693939-24694009)
[»] chr6 (15 HSPs)
chr6 (269-347)||(5995676-5995755)
chr6 (288-379)||(3042353-3042445)
chr6 (289-379)||(20215977-20216068)
chr6 (289-379)||(22109998-22110089)
chr6 (288-332)||(30996948-30996993)
chr6 (289-332)||(27048675-27048719)
chr6 (289-332)||(27058919-27058963)
chr6 (289-379)||(16587761-16587852)
chr6 (289-379)||(16607528-16607619)
chr6 (289-379)||(17092468-17092559)
chr6 (289-379)||(24919129-24919220)
chr6 (300-330)||(5488178-5488208)
chr6 (289-350)||(24296429-24296491)
chr6 (289-350)||(24310460-24310522)
chr6 (300-332)||(15390693-15390725)
[»] scaffold0027 (1 HSPs)
scaffold0027 (250-394)||(64635-64777)
[»] chr3 (12 HSPs)
chr3 (266-379)||(16289505-16289619)
chr3 (300-379)||(2216573-2216652)
chr3 (289-379)||(4444307-4444398)
chr3 (289-332)||(1005747-1005791)
chr3 (288-379)||(11262286-11262379)
chr3 (269-328)||(4504911-4504970)
chr3 (202-232)||(9184831-9184861)
chr3 (288-332)||(1775839-1775884)
chr3 (288-332)||(4887692-4887737)
chr3 (288-332)||(5517766-5517811)
chr3 (291-331)||(52987458-52987499)
chr3 (300-332)||(13603394-13603426)
[»] scaffold1120 (1 HSPs)
scaffold1120 (266-332)||(395-462)
[»] scaffold0609 (1 HSPs)
scaffold0609 (269-379)||(2483-2594)
[»] scaffold0206 (1 HSPs)
scaffold0206 (266-379)||(19468-19582)
[»] chr7 (14 HSPs)
chr7 (288-332)||(17515789-17515834)
chr7 (288-332)||(17537380-17537425)
chr7 (269-332)||(559863-559927)
chr7 (269-332)||(569772-569836)
chr7 (289-332)||(27967386-27967430)
chr7 (289-332)||(27976839-27976883)
chr7 (289-332)||(38411785-38411829)
chr7 (290-332)||(5200600-5200643)
chr7 (290-332)||(5209729-5209772)
chr7 (291-331)||(15974744-15974785)
chr7 (290-353)||(4185162-4185226)
chr7 (309-379)||(13737317-13737387)
chr7 (300-332)||(16474429-16474461)
chr7 (269-320)||(16911174-16911225)
[»] chr1 (4 HSPs)
chr1 (288-332)||(18750205-18750250)
chr1 (289-331)||(13463836-13463879)
chr1 (290-353)||(18597075-18597139)
chr1 (301-331)||(179835-179865)
[»] scaffold0497 (1 HSPs)
scaffold0497 (202-234)||(11927-11959)
[»] scaffold0001 (1 HSPs)
scaffold0001 (222-258)||(47854-47890)
[»] scaffold0703 (1 HSPs)
scaffold0703 (224-259)||(6739-6774)
[»] scaffold0669 (1 HSPs)
scaffold0669 (269-331)||(6011-6074)
[»] scaffold0016 (1 HSPs)
scaffold0016 (292-332)||(24495-24536)


Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 20 - 399
Target Start/End: Original strand, 26872395 - 26872771
Alignment:
Q  20 agagtaaacactaaaaaagggataaaatgacagtgaagcaaggactgtcagatcgtagatccaacggctccaacaaaataggtacatgataatagaaaca 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26872395 agagtaaacactaaaaaagggataaaatgacagtgaagcagggaccgtcagatcgtagatccaacggttccaacaaaataggtacatgataatagaaaca 26872494  T
Q  120 aggaggtgcatgtgattgttcaaacaaaaaggagtat-aaaatcaaatctcagcnnnnnnncacacataaaacatttatcttctctctctctaaacaatt 218  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| |||||       |||||||||||||||| |||  |||||||||||||||||    
T  26872495 aggaggtgcacgtgattgttcaaacaaaaaggagtataaaaatcaaatatcagcaaaaaaacacacataaaacatttctct--tctctctctaaacaatt 26872592  T
Q  219 gttctcacttctctcttaacaaaacaaacagccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcacc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26872593 gttctcacttctctcttaacaaaacaaacagccgcccccttat---atcatcttctccggcgagatagtgttttccggcgcggtggccggtggtggcacc 26872689  T
Q  318 accgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatccttttgcatgctggtttcaattctt 399  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26872690 accgcgccggagttcaaacttactccgattaaaaaatttcttgtagttttaaacatccttttgcgtgctggtttcaattctt 26872771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 281 - 399
Target Start/End: Original strand, 26875110 - 26875229
Alignment:
Q  281 agatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26875110 agatagtgttttccgacgcggtggccggtggtggcaccaccgcgccggagttcaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 26875209  T
Q  380 gcatgctggtttcaattctt 399  Q
    || |||||||||||||||||    
T  26875210 gcgtgctggtttcaattctt 26875229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 220 - 332
Target Start/End: Original strand, 17663566 - 17663675
Alignment:
Q  220 ttctcacttctctcttaacaaaacaaacagccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcacca 318  Q
    ||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  17663566 ttctcacttctctctcaacaaaacaaacagccgcccccttat---atcatcttctccggcgagacagtgttttccggcgcggtggccggtggt-gcacca 17663661  T
Q  319 ccgcgccggagttt 332  Q
    ||| ||||||||||    
T  17663662 ccgtgccggagttt 17663675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 220 - 332
Target Start/End: Original strand, 17682722 - 17682831
Alignment:
Q  220 ttctcacttctctcttaacaaaacaaacagccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcacca 318  Q
    ||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  17682722 ttctcacttctctctcaacaaaacaaacagccgcccccttat---atcatcttctccggcgagacagtgttttccggcgcggtggccggtggt-gcacca 17682817  T
Q  319 ccgcgccggagttt 332  Q
    ||| ||||||||||    
T  17682818 ccgtgccggagttt 17682831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 4838680 - 4838781
Alignment:
Q  250 ccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattc 348  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  | | |||||||    
T  4838680 ccgcccccttatatca---tcttctccggcgagatagtgttttccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactccgccgattc 4838776  T
Q  349 aaaaa 353  Q
    |||||    
T  4838777 aaaaa 4838781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 23091593 - 23091540
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaa 353  Q
    ||||||||||||||||||||||||||||||||| ||  | ||||||||| ||||    
T  23091593 gtggccggtggtggcaccaccgcgccggagttttaaactcctccgattccaaaa 23091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 36577971 - 36578012
Alignment:
Q  291 ttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  36577971 ttccggcgcggtggccggtggtggcaccaccgcgccggagtt 36578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 331
Target Start/End: Complemental strand, 4836540 - 4836509
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||||||||||||||||||||||    
T  4836540 gtggccggtggtggcaccaccgcgccggagtt 4836509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 331
Target Start/End: Complemental strand, 4841985 - 4841954
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||||||||||||||||||||||    
T  4841985 gtggccggtggtggcaccaccgcgccggagtt 4841954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1896 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold1896
Description:

Target: scaffold1896; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 215 - 399
Target Start/End: Complemental strand, 555 - 373
Alignment:
Q  215 aattgttctcacttctctcttaacaaaacaaacagccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtgg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||||| ||||    
T  555 aattgttctcacttctctcttaacaaaacaaacagccgcccccttatatcatc---ttctccggcgagatagtgttttccggcgcggtggccggtagtgg 459  T
Q  314 caccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatccttttgcatgctggtttcaattctt 399  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  458 caccaccgcgccggagttcaaacttgctccgattcaaaaatttcttgtagttttaaacatccttttgcatgctggtttcaattctt 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 251 - 399
Target Start/End: Complemental strand, 12997613 - 12997467
Alignment:
Q  251 cgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattca 349  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12997613 cgcccccttatat---catcttctccggcgagatagtgttttccggcgcggtggccggtggtggcaccaccgcgccggagttcaaacttactccgattca 12997517  T
Q  350 aaaatttcttgtagttttaaacatccttttgcatgctggtttcaattctt 399  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12997516 aaaatttcttgtagttttgaacatccttttgcatgctggtttcaattctt 12997467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 379
Target Start/End: Complemental strand, 24923357 - 24923243
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagt 364  Q
    |||||||||||||||||| |  |||||||||||| ||||||||||||||  ||||||||||||||||| ||  | |||||||||||||| || ||  | |    
T  24923357 tcatcttctccggcgagaaatagttttccggcgcagtggccggtggtggtgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatt 24923258  T
Q  365 tttaaacatcctttt 379  Q
    |||||||||||||||    
T  24923257 tttaaacatcctttt 24923243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 379
Target Start/End: Complemental strand, 17141935 - 17141824
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagtttt 367  Q
    ||||||||||||||  |  ||||||||||||| | |||||||||||| ||||||||||||||||| ||  | |||||||||||||| || ||    ||||    
T  17141935 tcttctccggcgagcaacggttttccggcgcggtagccggtggtggcgccaccgcgccggagttttaaaatcctccgattcaaaaactttttacgttttt 17141836  T
Q  368 aaacatcctttt 379  Q
    ||||||||||||    
T  17141835 aaacatcctttt 17141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 4749044 - 4749088
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  4749044 gttttccggcgcggtggccggtggtggcaccaccgcgccggagtt 4749088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 32215992 - 32215929
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||  |||||  |||||||| ||||| |||||||||||||||||||||||||||||||    
T  32215992 tcttctccgatgagatcatgttttccagcgcggtggccggtggtggcaccaccgcgccggagtt 32215929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 52296800 - 52296716
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaa 353  Q
    |||||||||||||||||   ||||||| |||| ||||||||||||||||||| ||||||||||| |||  | | ||||||||||||    
T  52296800 tcttctccggcgagataaa-ttttccgacgcggtggccggtggtggcaccactgcgccggagttcaaaactccgccgattcaaaaa 52296716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 331
Target Start/End: Original strand, 638078 - 638109
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||||||||||||||||||||||    
T  638078 gtggccggtggtggcaccaccgcgccggagtt 638109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 772329 - 772287
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagt 330  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  772329 ttttccggcgcggtggccggtggtggcacctccgcgccggagt 772287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 20866841 - 20866883
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagt 330  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  20866841 ttttccggcgcggtggccggtggtggcaccaccgcgccagagt 20866883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 5405293 - 5405338
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||    
T  5405293 gttttccggcgcggtggccggtggtggcgccgccgcgccggagttt 5405338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 250 - 399
Target Start/End: Complemental strand, 20622537 - 20622390
Alignment:
Q  250 ccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattc 348  Q
    ||||||||||||||||||   |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20622537 ccgcccccttatatcatc---ttctccggcgagatagtgttttccagcgcggtggccggtggtggcaccaccgcgccggagttcaaacttactccgattc 20622441  T
Q  349 aaaaatttcttgtagttttaaacatccttttgcatgctggtttcaattctt 399  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  20622440 aaaaatttcttgtagttctaaacatccttatgcatgctggtttcaattctt 20622390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 17686342 - 17686422
Alignment:
Q  250 ccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17686342 ccgcccccttatatca---tcttctccggcgagacagtgttttccggcgcgatggccggtggtggcaccaccgcgccggagttt 17686422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 379
Target Start/End: Complemental strand, 28480002 - 28479888
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagt 364  Q
    |||||||||||||||||  |  |||||||||||| ||||||||||||||| ||||||||||||||||| ||  |  ||| ||||||||| || ||  | |    
T  28480002 tcatcttctccggcgagcaatagttttccggcgcagtggccggtggtggcgccaccgcgccggagttttaaactcgtccaattcaaaaactttttacatt 28479903  T
Q  365 tttaaacatcctttt 379  Q
    |||||||||||||||    
T  28479902 tttaaacatcctttt 28479888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 21851519 - 21851582
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  21851519 tcttctccggcgagaaac-gttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 21851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 21859954 - 21860017
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  21859954 tcttctccggcgagaaac-gttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 21860017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 33308165 - 33308229
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||||||   | ||||||||||| ||||||||||||||||||||||||||||||||    
T  33308165 tcttctccggcgagatgaagctttccggcgcggtggccggtggtggcaccaccgcgccggagttt 33308229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 44373806 - 44373740
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||| ||||||||||    
T  44373806 tcatcttctccggcgagacagtgctttccggcgcggtggccggtggt-gcaccaccgtgccggagttt 44373740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 44389717 - 44389651
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||| ||||||||||    
T  44389717 tcatcttctccggcgagacagtgctttccggcgcggtggccggtggt-gcaccaccgtgccggagttt 44389651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 34543045 - 34543113
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatt 355  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||  | | ||||||||||||||    
T  34543045 gttttccggcgcggtggccggtggtggcaccaccgcgccggagtgtgaaactccgccgattcaaaaatt 34543113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 22186152 - 22186090
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||||||||||   ||||| |||||| |||||||||||||||||||||||||||||||    
T  22186152 tcttctccggcgagataaa-ttttctggcgcggtggccggtggtggcaccaccgcgccggagtt 22186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 25262635 - 25262592
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  25262635 tttccggcgcggtggccggtggtggcaccaccgcgccggagttt 25262592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 21150070 - 21149978
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    ||||||||||||| | || ||||||||| ||||||||||||||||| ||  | |||||||||||||  || ||  | ||||||||||||||||    
T  21150070 gttttccggcgcggtagctggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaagctttttacatttttaaacatcctttt 21149978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 21322005 - 21322044
Alignment:
Q  291 ttccggcgcg-tggccggtggtggcaccaccgcgccggag 329  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  21322005 ttccggcgcggtggccggtggtggcaccaccgcgccggag 21322044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 331
Target Start/End: Original strand, 25193118 - 25193149
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||||||||||||||||||||||    
T  25193118 gtggccggtggtggcaccaccgcgccggagtt 25193149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 39756339 - 39756276
Alignment:
Q  291 ttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaa 353  Q
    |||||||||| ||||||| |||||||||||||||||||||||  ||  | ||||||||||||||    
T  39756339 ttccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaaaaa 39756276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 27425289 - 27425331
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  27425289 tttccggcgcggtggccggcggtggcaccaccgcgccggagtt 27425331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 27440335 - 27440377
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  27440335 tttccggcgcggtggccggcggtggcaccaccgcgccggagtt 27440377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 34529071 - 34529109
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgcc 325  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  34529071 gttttccggcgcggtggccggtggtggcaccaccgcgcc 34529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 250 - 399
Target Start/End: Complemental strand, 31422801 - 31422654
Alignment:
Q  250 ccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattc 348  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||     
T  31422801 ccgcccccttatatcatc---ttctccggcgagatagtgttttccggcgcggtggccggtggtggcaccactgcgccggagttcaaacttactccgattt 31422705  T
Q  349 aaaaatttcttgtagttttaaacatccttttgcatgctggtttcaattctt 399  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  31422704 aaaaatttcttatagttctaaacatccttatgcatgctggtttcaattctt 31422654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 220 - 341
Target Start/End: Complemental strand, 31411923 - 31411804
Alignment:
Q  220 ttctcacttctctcttaacaaaacaaacagccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcacca 318  Q
    ||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31411923 ttctcacttctctctcaacaaaacaaacagccgcccccttatat---catcttctccggcgagatagtgttttccggcgcggtggccggtggtggcacca 31411827  T
Q  319 ccgcgccggagtttaaacttact 341  Q
    |||| |||||||| |||||||||    
T  31411826 ccgcaccggagttcaaacttact 31411804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 31549514 - 31549577
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||    
T  31549514 tcttctccggcgagataaa-ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 31549577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 29185243 - 29185310
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| || ||| |||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  29185243 tcatcttctccgacgggattgtgtcttccggcgcggtggccggtggtggcaccaccgtgccggagttt 29185310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 29189294 - 29189206
Alignment:
Q  292 tccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||   ||||||||||| ||| || ||  | ||||||||||||||||    
T  29189294 tccggcgcggtggccggtggtggcaccaccgcgcctgagttcaaaaccactccgattcacaaactttttacatttttaaacatcctttt 29189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 23568535 - 23568473
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||| |||||||||||||||    
T  23568535 tcttctccggcgagaaaa-gttttccggcgcggtggccggtggtggcatcaccgcgccggagtt 23568473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 331
Target Start/End: Complemental strand, 2826905 - 2826874
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtt 331  Q
    ||||||||||||||||||||||||||||||||    
T  2826905 gtggccggtggtggcaccaccgcgccggagtt 2826874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 379
Target Start/End: Original strand, 24693939 - 24694009
Alignment:
Q  309 ggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||| |||||||||||||| | |||  | ||||||||||||| ||| ||| | ||||||||||||||||    
T  24693939 ggtggcgccaccgcgccggagctcaaaacttctccgattcaaaatttttttgcacttttaaacatcctttt 24694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 5995755 - 5995676
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgatt 347  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||||||||||||    
T  5995755 tcttctccggcgagatagtgttttccggcacggtggccggtggtggcaccaccgcgccggagttcaaccttactccgatt 5995676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 3042445 - 3042353
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| ||  | |||||||||||||| || ||    ||||||||||||||||    
T  3042445 gttttccggcgcggtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacgtttttaaacatcctttt 3042353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 20216068 - 20215977
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| ||||||| ||||||||||||||||||||| | |||  | |||||||||||||| || ||  | ||||||||||||||||    
T  20216068 ttttccggcgcggtggccggcggtggcaccaccgcgccggagctcaaaacttctccgattcaaaaactttttacatttttaaacatcctttt 20215977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 22110089 - 22109998
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| ||||||| ||||||||||||||||||||| | |||  | |||||||||||||| || ||  | ||||||||||||||||    
T  22110089 ttttccggcgcggtggccggcggtggcaccaccgcgccggagctcaaaacttctccgattcaaaaactttttacatttttaaacatcctttt 22109998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 30996948 - 30996993
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  30996948 gttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 30996993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 27048675 - 27048719
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27048675 ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 27048719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 27058919 - 27058963
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27058919 ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 27058963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 16587852 - 16587761
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| | |||||||||||| ||||||||||||||||| ||  |  ||||||||||||| || ||  | ||||||||||||||||    
T  16587852 ttttccggcgcggttgccggtggtggcgccaccgcgccggagtttcaaactcttccgattcaaaaactttttacatttttaaacatcctttt 16587761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 379
Target Start/End: Original strand, 16607528 - 16607619
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| | |||||||||||| ||||||||||||||||| ||  |  ||||||||||||| || ||  | ||||||||||||||||    
T  16607528 ttttccggcgcggttgccggtggtggcgccaccgcgccggagtttcaaactcttccgattcaaaaactttttacatttttaaacatcctttt 16607619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 379
Target Start/End: Original strand, 17092468 - 17092559
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| ||||||| |||||| ||||| |||||||||| |||  | ||||||||||||||||| ||  | |||| |||||||||||    
T  17092468 ttttccggcgcgatggccggcggtggcgccaccacgccggagttcaaaactcctccgattcaaaaattttttacatttttgaacatcctttt 17092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 24919220 - 24919129
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| |||||||  ||||||||||||||||||||||  ||  | |||||||||||||| || ||  | ||||||||||||||||    
T  24919220 ttttccggcgcggtggccggcagtggcaccaccgcgccggagttcgaaactcctccgattcaaaaactttttacatttttaaacatcctttt 24919129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 330
Target Start/End: Original strand, 5488178 - 5488208
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagt 330  Q
    |||||||||||||||||||||||||||||||    
T  5488178 gtggccggtggtggcaccaccgcgccggagt 5488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 24296429 - 24296491
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaa 350  Q
    |||||||||||| ||||||| |||||||||||| |||||||||| |||  | |||||||||||    
T  24296429 ttttccggcgcggtggccggcggtggcaccaccacgccggagttcaaaactcctccgattcaa 24296491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 24310460 - 24310522
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaa 350  Q
    |||||||||||| ||||||| |||||||||||| |||||||||| |||  | |||||||||||    
T  24310460 ttttccggcgcggtggccggcggtggcaccaccacgccggagttcaaaactcctccgattcaa 24310522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 15390693 - 15390725
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||| ||||||||||||||||||||||    
T  15390693 gtggccggtgttggcaccaccgcgccggagttt 15390725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 394
Target Start/End: Original strand, 64635 - 64777
Alignment:
Q  250 ccgcccccttatatcatcatcttctccggcgagatagtgttttccggcgc-gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattc 348  Q
    ||||||||||||||||   ||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||| ||| | |||  | ||    
T  64635 ccgcccccttatatca---tcttctccggcgagacagtgttttccggcgcggtggtcgttggtggcaccaccgcgccggagtttcaacctcctctaaatc 64731  T
Q  349 aaaaatttcttgtagttttaaacatccttttgcatgctggtttcaa 394  Q
    |||||||  ||    |||||||||||||||| ||| || |||||||    
T  64732 aaaaattgtttacgtttttaaacatcctttttcattcttgtttcaa 64777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 379
Target Start/End: Complemental strand, 16289619 - 16289505
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagt 364  Q
    |||||||||||||||||  |  ||||||||||||| |||||||||||||| ||||||||||||||||| ||  | |||||||||||||| || ||  | |    
T  16289619 tcatcttctccggcgagcaatagttttccggcgcggtggccggtggtggcgccaccgcgccggagttttaaagtcctccgattcaaaaactttttacatt 16289520  T
Q  365 tttaaacatcctttt 379  Q
    |||||||||||||||    
T  16289519 tttaaacatcctttt 16289505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 2216573 - 2216652
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    ||||||||||||||| ||||||||||||||||| ||  | |||||||||||||| || || || ||||||||||||||||    
T  2216573 gtggccggtggtggcgccaccgcgccggagtttcaaactcctccgattcaaaaactttttatatttttaaacatcctttt 2216652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 4444398 - 4444307
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||||||||| ||||||| |||||||||||| |||||||||| |||  | ||||||||||||  ||||||  | ||||||||||||||||    
T  4444398 ttttccggcgcggtggccggcggtggcaccaccacgccggagttcaaaactcctccgattcaaatttttcttacatttttaaacatcctttt 4444307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 1005747 - 1005791
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  1005747 ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 1005791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 379
Target Start/End: Original strand, 11262286 - 11262379
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgcc-ggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||| ||  | |||||||||||||| || ||    ||||||||||||||||    
T  11262286 gttttccggcgcggtggccggtggtggcgccaccgcgccgggagttttaaactcctccgattcaaaaactttttacgtttttaaacatcctttt 11262379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 4504911 - 4504970
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccgga 328  Q
    ||||||||||||||| |  ||||||||||||| |||||||||||||||||||| |||||||    
T  4504911 tcttctccggcgagaaaa-gttttccggcgcggtggccggtggtggcaccaccacgccgga 4504970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 9184831 - 9184861
Alignment:
Q  202 tctctctctaaacaattgttctcacttctct 232  Q
    |||||||||||||||||||||||||||||||    
T  9184831 tctctctctaaacaattgttctcacttctct 9184861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 1775884 - 1775839
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||    
T  1775884 gttttccggcgcggtggccggtggtggcgccgccgcgccggagttt 1775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 4887737 - 4887692
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||    
T  4887737 gttttccggcgcggtggccggtggtggcgccgccgcgccggagttt 4887692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 5517766 - 5517811
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||    
T  5517766 gttttccggcgcggtggccggtggtggcgccgccgcgccggagttt 5517811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 52987499 - 52987458
Alignment:
Q  291 ttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  52987499 ttccggcgcggtggtcggtggtggcaccaccgcgccggagtt 52987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 13603394 - 13603426
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||| |||||||||||||||||||||||||    
T  13603394 gtggccgatggtggcaccaccgcgccggagttt 13603426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1120 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 462 - 395
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| |||| |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  462 tcatcttctccgacgagttcatgttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 269 - 379
Target Start/End: Original strand, 2483 - 2594
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagtttt 367  Q
    ||||||||||||||  |  ||||||||||||| | |||||||||||| ||||||||||||||||| ||  | |||||||||||||| || ||  | ||||    
T  2483 tcttctccggcgagcaatagttttccggcgcggtagccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacattttt 2582  T
Q  368 aaacatcctttt 379  Q
    ||||||||||||    
T  2583 aaacatcctttt 2594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 379
Target Start/End: Complemental strand, 19582 - 19468
Alignment:
Q  266 tcatcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt-taaacttactccgattcaaaaatttcttgtag 363  Q
    ||||||||||||||| ||||    ||||||||||| ||||||| ||||||||||||||||||||||| ||||| | |||||||||||||| || ||  |     
T  19582 tcatcttctccggcgtgatacaactttccggcgcggtggccggcggtggcaccaccgcgccggagttctaaac-tcctccgattcaaaaactttttacat 19484  T
Q  364 ttttaaacatcctttt 379  Q
    ||||||||||||||||    
T  19483 ttttaaacatcctttt 19468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 17515789 - 17515834
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17515789 gttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 17515834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 17537425 - 17537380
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17537425 gttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 17537380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 559863 - 559927
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||||  |  ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  559863 tcttctccggcgaggcaaggttttccagcgcggtggccggtggtggcaccaccgcgccggagttt 559927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 569772 - 569836
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||||  |  ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  569772 tcttctccggcgaggcaaggttttccagcgcggtggccggtggtggcaccaccgcgccggagttt 569836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 27967386 - 27967430
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27967386 ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 27967430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 27976839 - 27976883
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27976839 ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 27976883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 38411829 - 38411785
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  38411829 ttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 38411785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 5200600 - 5200643
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  5200600 tttccggcgcggtggccggtggtggcaccaccgcgccggagttt 5200643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 5209729 - 5209772
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  5209729 tttccggcgcggtggccggtggtggcaccaccgcgccggagttt 5209772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 15974785 - 15974744
Alignment:
Q  291 ttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  15974785 ttccggcgcggtggccggtggtggcaccaccgcgccggagtt 15974744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 4185226 - 4185162
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaa 353  Q
    ||||||||||| ||||||| |||||||||||||||||||||||  ||  | ||||||||||||||    
T  4185226 tttccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaaaaa 4185162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 379
Target Start/End: Original strand, 13737317 - 13737387
Alignment:
Q  309 ggtggcaccaccgcgccggagtttaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 379  Q
    |||||| |||||||||||||| | |||  | ||||||||||||| ||| ||| | ||||||||||||||||    
T  13737317 ggtggcgccaccgcgccggagctcaaaacttctccgattcaaaatttttttgcacttttaaacatcctttt 13737387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 16474429 - 16474461
Alignment:
Q  300 gtggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||| |||||||||||||||||||||||||    
T  16474429 gtggccgatggtggcaccaccgcgccggagttt 16474461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 16911174 - 16911225
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccacc 320  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||||||||    
T  16911174 tcttctccggcgagaaaa-gttttccggcgcggtggccggtggtggcaccacc 16911225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 18750250 - 18750205
Alignment:
Q  288 gttttccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  18750250 gttttccggcgcggtggccggtggtggcaccaccgcgccggagttt 18750205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 13463879 - 13463836
Alignment:
Q  289 ttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  13463879 ttttccggcgcggtggccggtggtggcaccaccgcgccggagtt 13463836  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 18597139 - 18597075
Alignment:
Q  290 tttccggcgcg-tggccggtggtggcaccaccgcgccggagtttaaacttactccgattcaaaaa 353  Q
    ||||||||||| ||||||| |||||||||||||||||||||||  ||  | ||||||||||||||    
T  18597139 tttccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaaaaa 18597075  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 331
Target Start/End: Original strand, 179835 - 179865
Alignment:
Q  301 tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||||||||||||||||||||||||    
T  179835 tggccggtggtggcaccaccgcgccggagtt 179865  T

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Target: scaffold0497 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 11959 - 11927
Alignment:
Q  202 tctctctctaaacaattgttctcacttctctct 234  Q
    |||||||||||||||||||||||||||||||||    
T  11959 tctctctctaaacaattgttctcacttctctct 11927  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 47854 - 47890
Alignment:
Q  222 ctcacttctctcttaacaaaacaaacagccgccccct 258  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47854 ctcacttctctctcaacaaaacaaacagccgccccct 47890  T

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Target: scaffold0703 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0703
Description:

Target: scaffold0703; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 6739 - 6774
Alignment:
Q  224 cacttctctcttaacaaaacaaacagccgccccctt 259  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6739 cacttctctctcaacaaaacaaacagccgccccctt 6774  T

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Target: scaffold0669 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 6011 - 6074
Alignment:
Q  269 tcttctccggcgagatagtgttttccggcgcg-tggccggtggtggcaccaccgcgccggagtt 331  Q
    |||||||||  |||||  ||||| |||||||| ||||||||||||||||||||| |||||||||    
T  6011 tcttctccgatgagatcatgtttaccggcgcggtggccggtggtggcaccaccgtgccggagtt 6074  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 24536 - 24495
Alignment:
Q  292 tccggcgcg-tggccggtggtggcaccaccgcgccggagttt 332  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  24536 tccggcgcggtggccggtggtggcaccaccgcaccggagttt 24495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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