View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14142_high_37 (Length: 247)
Name: NF14142_high_37
Description: NF14142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14142_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6669665 - 6669899
Alignment:
| Q |
1 |
ttgataggaacttgtgtcaacaaattgtacttaatgatatgggaaacatcataactacaatgagatcagacattagtgtcccataacaaatcgatattcc |
100 |
Q |
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| T |
6669665 |
ttgataggaacttgtgtcaacaaattgtacttaatgatatgggaaacatcataactacaatgagatcagacattagtgtcccataacaaatcgatattcc |
6669764 |
T |
|
| Q |
101 |
ttgtttggaggctgctggagaagcttcctcgaattattcctaacacaccaacaggaacattccaccattgtacttgctctttctagaagtaaaagcaatg |
200 |
Q |
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| T |
6669765 |
ttgtttggaggctgctggagaagcttcctcgaattattcctaacacaccaacaggaacattccaccattgtacttgctctttctagaagtaaaagcaatg |
6669864 |
T |
|
| Q |
201 |
tgcgtggttggtgggtcataggacttgtcaactat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
6669865 |
tgcgtggttggtgggtcataggacttgtcaactat |
6669899 |
T |
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