View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14142_high_42 (Length: 233)

Name: NF14142_high_42
Description: NF14142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14142_high_42
NF14142_high_42
[»] chr1 (46 HSPs)
chr1 (17-218)||(6669271-6669471)
chr1 (55-135)||(40326721-40326802)
chr1 (56-179)||(50248032-50248156)
chr1 (56-177)||(15331063-15331185)
chr1 (55-179)||(42630985-42631110)
chr1 (55-120)||(50145132-50145197)
chr1 (56-179)||(5598304-5598428)
chr1 (56-177)||(2208898-2209018)
chr1 (56-177)||(41651078-41651201)
chr1 (56-180)||(13048808-13048933)
chr1 (56-180)||(13053805-13053930)
chr1 (56-180)||(13948106-13948230)
chr1 (56-121)||(49632617-49632682)
chr1 (56-179)||(40685532-40685656)
chr1 (56-181)||(15104045-15104172)
chr1 (57-179)||(17068155-17068278)
chr1 (56-178)||(52492682-52492805)
chr1 (56-102)||(5511864-5511910)
chr1 (56-149)||(27856030-27856124)
chr1 (56-177)||(43500144-43500266)
chr1 (56-158)||(43841780-43841882)
chr1 (56-181)||(48731757-48731883)
chr1 (56-177)||(49500866-49500988)
chr1 (56-179)||(11403172-11403296)
chr1 (56-92)||(15485693-15485729)
chr1 (56-179)||(15906168-15906292)
chr1 (55-181)||(39467025-39467150)
chr1 (56-179)||(49948244-49948368)
chr1 (56-158)||(1576398-1576501)
chr1 (56-181)||(15952832-15952959)
chr1 (56-158)||(33845605-33845708)
chr1 (56-158)||(33948270-33948373)
chr1 (56-158)||(44623019-44623122)
chr1 (56-86)||(13874139-13874169)
chr1 (56-165)||(24254412-24254521)
chr1 (56-177)||(43086472-43086594)
chr1 (55-96)||(30455277-30455318)
chr1 (56-121)||(39606467-39606532)
chr1 (56-121)||(43676025-43676090)
chr1 (56-179)||(4126578-4126702)
chr1 (56-92)||(12663678-12663714)
chr1 (122-158)||(19016900-19016936)
chr1 (56-179)||(29510652-29510776)
chr1 (56-104)||(34240109-34240157)
chr1 (132-180)||(39380228-39380276)
chr1 (56-179)||(41445031-41445155)
[»] chr3 (50 HSPs)
chr3 (57-180)||(36540107-36540231)
chr3 (55-179)||(21402660-21402783)
chr3 (56-181)||(25118707-25118833)
chr3 (56-181)||(28731848-28731974)
chr3 (56-177)||(47570288-47570410)
chr3 (55-179)||(50238840-50238965)
chr3 (56-179)||(40559677-40559801)
chr3 (55-179)||(46311445-46311568)
chr3 (56-158)||(1339244-1339347)
chr3 (57-158)||(54923510-54923613)
chr3 (56-177)||(23878951-23879073)
chr3 (56-181)||(45475233-45475359)
chr3 (59-186)||(23525912-23526038)
chr3 (56-179)||(12088283-12088407)
chr3 (56-179)||(6083143-6083266)
chr3 (56-123)||(27002741-27002808)
chr3 (125-174)||(9174690-9174740)
chr3 (56-179)||(24250728-24250853)
chr3 (56-121)||(35359779-35359844)
chr3 (56-121)||(42683055-42683120)
chr3 (56-92)||(9318608-9318644)
chr3 (56-159)||(27719117-27719221)
chr3 (56-179)||(44037445-44037569)
chr3 (56-179)||(46894816-46894940)
chr3 (56-179)||(47410753-47410877)
chr3 (56-179)||(48191097-48191221)
chr3 (55-123)||(51402883-51402951)
chr3 (56-123)||(48209432-48209499)
chr3 (55-121)||(11076467-11076533)
chr3 (56-177)||(24751758-24751880)
chr3 (56-181)||(36518101-36518227)
chr3 (56-121)||(5349919-5349984)
chr3 (56-179)||(8826628-8826753)
chr3 (56-97)||(11250044-11250085)
chr3 (79-159)||(25312950-25313031)
chr3 (55-158)||(32635403-32635508)
chr3 (56-121)||(34397742-34397807)
chr3 (56-97)||(45521067-45521108)
chr3 (56-121)||(47069069-47069134)
chr3 (55-92)||(49285599-49285636)
chr3 (56-121)||(52256753-52256818)
chr3 (56-179)||(3917769-3917893)
chr3 (56-179)||(12948813-12948936)
chr3 (56-179)||(15003631-15003755)
chr3 (56-179)||(32960979-32961103)
chr3 (55-158)||(33886370-33886474)
chr3 (56-92)||(35107294-35107330)
chr3 (56-92)||(35966333-35966369)
chr3 (56-179)||(38127843-38127967)
chr3 (56-179)||(40192957-40193081)
[»] chr7 (33 HSPs)
chr7 (56-179)||(3043817-3043941)
chr7 (55-150)||(6071137-6071232)
chr7 (56-158)||(30627648-30627751)
chr7 (55-179)||(40857342-40857465)
chr7 (55-179)||(10166873-10166997)
chr7 (56-179)||(38261004-38261128)
chr7 (55-177)||(27339728-27339851)
chr7 (56-177)||(2286094-2286216)
chr7 (56-179)||(45236933-45237057)
chr7 (56-178)||(48401290-48401413)
chr7 (106-174)||(41708593-41708663)
chr7 (55-179)||(28649366-28649491)
chr7 (56-179)||(44327643-44327767)
chr7 (56-158)||(3861337-3861440)
chr7 (56-179)||(48467814-48467937)
chr7 (56-177)||(42557503-42557625)
chr7 (56-97)||(5222576-5222617)
chr7 (78-158)||(5723626-5723707)
chr7 (56-121)||(6327273-6327338)
chr7 (56-121)||(17895696-17895761)
chr7 (56-121)||(27396315-27396380)
chr7 (56-179)||(41862790-41862912)
chr7 (56-121)||(45041734-45041799)
chr7 (55-92)||(45594891-45594928)
chr7 (56-121)||(48612579-48612644)
chr7 (56-92)||(2228081-2228117)
chr7 (56-179)||(4674310-4674434)
chr7 (56-179)||(4887514-4887638)
chr7 (56-179)||(7312454-7312578)
chr7 (56-92)||(9907950-9907986)
chr7 (56-96)||(25648157-25648197)
chr7 (56-179)||(35157085-35157209)
chr7 (56-92)||(43188623-43188659)
[»] chr5 (58 HSPs)
chr5 (56-159)||(4874246-4874350)
chr5 (56-181)||(40199105-40199231)
chr5 (59-177)||(9068808-9068927)
chr5 (62-179)||(2706137-2706255)
chr5 (56-179)||(17080468-17080592)
chr5 (56-179)||(28391176-28391300)
chr5 (56-150)||(7670398-7670493)
chr5 (56-177)||(10011475-10011599)
chr5 (56-179)||(671060-671184)
chr5 (56-179)||(1287318-1287442)
chr5 (56-179)||(36136863-36136987)
chr5 (58-181)||(37940919-37941043)
chr5 (56-158)||(972595-972698)
chr5 (56-178)||(24637958-24638081)
chr5 (56-179)||(32466572-32466698)
chr5 (56-158)||(35932978-35933081)
chr5 (56-114)||(28489253-28489311)
chr5 (56-121)||(9053972-9054037)
chr5 (56-179)||(10458729-10458854)
chr5 (56-179)||(12878121-12878243)
chr5 (56-121)||(24051465-24051530)
chr5 (56-97)||(29402096-29402137)
chr5 (63-159)||(35232566-35232663)
chr5 (56-121)||(36319503-36319568)
chr5 (56-121)||(40596018-40596083)
chr5 (56-172)||(41071072-41071189)
chr5 (56-177)||(42645464-42645588)
chr5 (56-179)||(29806570-29806694)
chr5 (56-179)||(36185140-36185264)
chr5 (56-181)||(6053055-6053178)
chr5 (56-177)||(10165537-10165659)
chr5 (56-177)||(12769126-12769248)
chr5 (56-181)||(25328305-25328431)
chr5 (56-121)||(1833320-1833385)
chr5 (59-96)||(5029910-5029947)
chr5 (56-121)||(6672303-6672368)
chr5 (56-121)||(10393503-10393568)
chr5 (56-121)||(17869125-17869190)
chr5 (56-121)||(18990535-18990600)
chr5 (56-121)||(19867282-19867347)
chr5 (56-97)||(32273979-32274020)
chr5 (59-179)||(33028233-33028354)
chr5 (61-160)||(33201661-33201759)
chr5 (56-121)||(36245995-36246060)
chr5 (56-121)||(40318786-40318851)
chr5 (56-92)||(1277529-1277565)
chr5 (56-179)||(4164962-4165086)
chr5 (58-181)||(4429944-4430068)
chr5 (56-92)||(7809666-7809702)
chr5 (56-179)||(12707877-12708001)
chr5 (145-177)||(13271185-13271217)
chr5 (56-92)||(19836088-19836124)
chr5 (123-159)||(22096754-22096790)
chr5 (56-92)||(23219115-23219151)
chr5 (56-179)||(24443868-24443992)
chr5 (56-92)||(26310749-26310785)
chr5 (56-92)||(27003964-27004000)
chr5 (56-92)||(28870041-28870077)
[»] chr2 (39 HSPs)
chr2 (56-181)||(15488750-15488876)
chr2 (56-179)||(39218684-39218809)
chr2 (56-179)||(43461335-43461459)
chr2 (56-158)||(18055883-18055986)
chr2 (56-148)||(8293556-8293649)
chr2 (55-179)||(16534943-16535068)
chr2 (56-179)||(38463142-38463267)
chr2 (56-179)||(11816777-11816901)
chr2 (56-179)||(40812020-40812144)
chr2 (56-120)||(42211341-42211405)
chr2 (55-94)||(6598485-6598524)
chr2 (56-150)||(25994654-25994747)
chr2 (56-157)||(36685404-36685506)
chr2 (56-149)||(41520531-41520625)
chr2 (55-179)||(727289-727414)
chr2 (59-179)||(8859291-8859412)
chr2 (59-179)||(42200866-42200987)
chr2 (56-179)||(6731545-6731669)
chr2 (56-179)||(12236124-12236248)
chr2 (58-149)||(12541339-12541431)
chr2 (56-179)||(13267976-13268100)
chr2 (56-179)||(23957055-23957179)
chr2 (56-179)||(33607046-33607170)
chr2 (56-179)||(34667047-34667171)
chr2 (56-159)||(12203540-12203648)
chr2 (56-177)||(3048547-3048669)
chr2 (56-97)||(19832236-19832277)
chr2 (56-121)||(23497513-23497578)
chr2 (59-179)||(39310369-39310490)
chr2 (56-92)||(4190405-4190441)
chr2 (56-179)||(15897217-15897341)
chr2 (56-92)||(19967825-19967861)
chr2 (56-179)||(20251486-20251610)
chr2 (59-119)||(30854739-30854799)
chr2 (59-123)||(31524956-31525020)
chr2 (56-179)||(35706855-35706979)
chr2 (56-179)||(36754742-36754866)
chr2 (55-162)||(37644233-37644341)
chr2 (59-123)||(43841716-43841780)
[»] chr4 (49 HSPs)
chr4 (56-179)||(36752362-36752486)
chr4 (56-179)||(579243-579367)
chr4 (56-158)||(13218221-13218324)
chr4 (55-179)||(5060412-5060535)
chr4 (55-121)||(17480994-17481060)
chr4 (56-177)||(24407502-24407624)
chr4 (55-179)||(1083511-1083636)
chr4 (55-179)||(41323537-41323662)
chr4 (72-158)||(46107417-46107505)
chr4 (55-158)||(46552949-46553053)
chr4 (56-179)||(54864399-54864523)
chr4 (118-177)||(2402247-2402306)
chr4 (55-177)||(48628464-48628587)
chr4 (55-123)||(51281526-51281596)
chr4 (56-158)||(54096941-54097044)
chr4 (56-181)||(47462037-47462163)
chr4 (56-177)||(52772121-52772243)
chr4 (80-181)||(16460937-16461038)
chr4 (59-96)||(36751904-36751941)
chr4 (64-149)||(43588799-43588884)
chr4 (55-96)||(48860089-48860130)
chr4 (56-179)||(24712091-24712215)
chr4 (56-158)||(31633797-31633900)
chr4 (140-179)||(34123412-34123451)
chr4 (56-178)||(37166142-37166265)
chr4 (56-177)||(31435919-31436041)
chr4 (56-98)||(51425412-51425454)
chr4 (56-181)||(54907893-54908019)
chr4 (55-92)||(9749086-9749123)
chr4 (56-121)||(25586328-25586393)
chr4 (56-121)||(27009349-27009414)
chr4 (56-121)||(31375175-31375240)
chr4 (56-117)||(32233678-32233739)
chr4 (56-121)||(39284576-39284641)
chr4 (56-121)||(40996428-40996493)
chr4 (56-174)||(44619857-44619978)
chr4 (129-158)||(51491841-51491870)
chr4 (56-92)||(7413183-7413219)
chr4 (56-92)||(7459263-7459299)
chr4 (56-179)||(12315931-12316055)
chr4 (56-179)||(13389023-13389147)
chr4 (56-179)||(24550816-24550940)
chr4 (123-179)||(28187233-28187289)
chr4 (56-179)||(30044585-30044709)
chr4 (56-179)||(31263502-31263626)
chr4 (56-179)||(33416581-33416705)
chr4 (56-92)||(48139977-48140013)
chr4 (56-179)||(49882710-49882834)
chr4 (59-158)||(53216037-53216136)
[»] chr8 (50 HSPs)
chr8 (56-181)||(43167140-43167266)
chr8 (56-121)||(43105880-43105945)
chr8 (55-177)||(37953788-37953911)
chr8 (56-177)||(8971810-8971932)
chr8 (56-177)||(20993542-20993664)
chr8 (55-116)||(41897891-41897952)
chr8 (60-179)||(7772055-7772175)
chr8 (56-179)||(40744243-40744367)
chr8 (56-179)||(41562445-41562571)
chr8 (59-177)||(44604825-44604944)
chr8 (56-181)||(10096613-10096739)
chr8 (56-177)||(37817381-37817503)
chr8 (56-102)||(43294006-43294052)
chr8 (59-179)||(11100292-11100413)
chr8 (56-121)||(16395435-16395500)
chr8 (55-92)||(24241898-24241935)
chr8 (59-158)||(10006170-10006270)
chr8 (56-179)||(14188093-14188217)
chr8 (56-179)||(14243702-14243826)
chr8 (78-177)||(14725774-14725874)
chr8 (56-179)||(20150224-20150348)
chr8 (56-179)||(23554873-23554997)
chr8 (56-179)||(24654977-24655101)
chr8 (56-179)||(25199049-25199173)
chr8 (56-179)||(26737974-26738098)
chr8 (56-149)||(2589321-2589414)
chr8 (56-177)||(5895796-5895918)
chr8 (56-102)||(5917363-5917409)
chr8 (56-161)||(10926087-10926193)
chr8 (61-123)||(41278661-41278723)
chr8 (58-92)||(44225278-44225312)
chr8 (55-179)||(2508134-2508259)
chr8 (56-97)||(14725388-14725429)
chr8 (56-121)||(19649499-19649564)
chr8 (55-179)||(27928161-27928286)
chr8 (56-101)||(34642438-34642483)
chr8 (56-121)||(37295188-37295253)
chr8 (56-121)||(40772566-40772631)
chr8 (56-92)||(3673844-3673880)
chr8 (56-179)||(4430736-4430860)
chr8 (56-179)||(6317303-6317427)
chr8 (56-96)||(13753705-13753745)
chr8 (56-179)||(18040139-18040263)
chr8 (56-92)||(20662613-20662649)
chr8 (56-88)||(24284056-24284088)
chr8 (56-179)||(27544917-27545041)
chr8 (56-179)||(34711556-34711680)
chr8 (56-92)||(35058416-35058452)
chr8 (56-179)||(36586485-36586609)
chr8 (56-179)||(42922542-42922666)
[»] chr6 (22 HSPs)
chr6 (56-177)||(17546041-17546163)
chr6 (56-181)||(24571618-24571744)
chr6 (56-179)||(31062948-31063071)
chr6 (56-117)||(7974708-7974769)
chr6 (55-158)||(8977179-8977283)
chr6 (55-121)||(2395557-2395623)
chr6 (55-121)||(31057894-31057960)
chr6 (55-158)||(6266656-6266760)
chr6 (56-179)||(8939629-8939753)
chr6 (56-92)||(12473738-12473774)
chr6 (56-179)||(12795020-12795144)
chr6 (56-179)||(32107836-32107960)
chr6 (55-92)||(2236325-2236362)
chr6 (56-121)||(5603448-5603513)
chr6 (56-121)||(9727557-9727622)
chr6 (55-92)||(22721344-22721381)
chr6 (57-177)||(34830783-34830904)
chr6 (56-92)||(343148-343184)
chr6 (56-179)||(8487554-8487678)
chr6 (56-179)||(10181048-10181172)
chr6 (56-92)||(14465826-14465862)
chr6 (56-179)||(23383057-23383181)
[»] scaffold0244 (1 HSPs)
scaffold0244 (55-179)||(7757-7882)
[»] scaffold0633 (1 HSPs)
scaffold0633 (56-177)||(3795-3918)
[»] scaffold0795 (1 HSPs)
scaffold0795 (58-159)||(1083-1185)
[»] scaffold0018 (1 HSPs)
scaffold0018 (55-96)||(161922-161963)
[»] scaffold0013 (1 HSPs)
scaffold0013 (56-179)||(90572-90696)
[»] scaffold0057 (1 HSPs)
scaffold0057 (56-123)||(64343-64410)
[»] scaffold0515 (1 HSPs)
scaffold0515 (55-179)||(2481-2606)
[»] scaffold0306 (1 HSPs)
scaffold0306 (55-179)||(2481-2606)
[»] scaffold0289 (1 HSPs)
scaffold0289 (130-158)||(6619-6647)
[»] scaffold0122 (1 HSPs)
scaffold0122 (56-92)||(15613-15649)


Alignment Details
Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 6669471 - 6669271
Alignment:
Q  17 aatatcgattaacaataaatgtctaactannnnnnnnnatagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggtt 116  Q
    |||||||||||||||||||||||||||||          |||||| | |||||||||||  ||||||||| ||||| ||| || || | ||| |||||||    
T  6669471 aatatcgattaacaataaatgtctaactattttttttt-tagataaatgaaatgacaaagccattataaactcacacacataagtggaggtaccggggtt 6669373  T
Q  117 cgaactcgatcataacatctgatctaacaattttgacattttattaattgagctaggacttctagtttataaatgtctaacttaagtttcacgtaaaagt 216  Q
    |||||||| |||| | ||| | ||||| ||||||  |||||||| |||||||||| ||||||| | | ||||||||||||||||||||||||||||||||    
T  6669372 cgaactcggtcatgatatccggtctaataattttagcattttatcaattgagctaagacttctggataataaatgtctaacttaagtttcacgtaaaagt 6669273  T
Q  217 ga 218  Q
    ||    
T  6669272 ga 6669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 40326721 - 40326802
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatc 135  Q
    ||||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||    
T  40326721 atagatagacgaaattacaaaaccattataaattcacacacacaaatgaaggtatcggggttcgaactccgatcataacatc 40326802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 50248156 - 50248032
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||| |||| |||| ||||| |  |||||||||| ||||    
T  50248156 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaacctcggtcatgacatccggcctaacaatttcgaca 50248057  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||| | ||||||||||||||||    
T  50248056 ttttatcagttgagctaggacttct 50248032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 15331063 - 15331185
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||||||| || || | ||| ||||||||||| |||| ||||  |||| || |||||||||| | ||    
T  15331063 tagatagacgaaatgacaaagtcattataaactcacatacacaagtggaggtaccggggttcgaacctcggtcatggcatccgacctaacaatttcggca 15331162  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  15331163 tttttccagttgagctaggactt 15331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 42630985 - 42631110
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||| |||||||||| ||||| ||| || || | ||||||||||||||| | |||||||  |||| |  |||||||||| | |    
T  42630985 atagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtatcggggttcgaaccccgatcatggcatccggcctaacaatttcggc 42631084  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   | ||||||||||||||||    
T  42631085 attttgccagttgagctaggacttct 42631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 50145132 - 50145197
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa 120  Q
    ||||||||||||||||||||| |||||||||| ||||| ||| || |||| |||||||||||||||    
T  50145132 atagatagacgaaatgacaaagtcattataaactcacacacacaagtgaaggtatcggggttcgaa 50145197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 5598428 - 5598304
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||| || |||| ||||| || |||||||||| | ||    
T  5598428 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccgacctaacaatttcggca 5598329  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  5598328 tttttccagttgagctaggacttct 5598304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 2208898 - 2209018
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||||||  || || | |||||||| |||||| |||  |||| ||||| ||||||||||||| | ||    
T  2208898 tagatagacgaaatgacaaagtcattataaactcacatac--aagtggaggtatcgggattcgaatctcagtcatgacatccgatctaacaatttcggca 2208995  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||||| | |||| |||| ||||    
T  2208996 ttttatcagttgaactagaactt 2209018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 41651201 - 41651078
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacataca-aaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||| ||| |||| |||||| | ||||||| || ||  | |||||||||| | |    
T  41651201 tagatagacgaaatgacaaaaccattataaactcacacacataaaatgaaggtaccgggattcgaaccccgatcatgacgtccaacctaacaatttcggc 41651102  T
Q  154 attttattaattgagctaggactt 177  Q
    ||||||  | ||||||||||||||    
T  41651101 attttaccagttgagctaggactt 41651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 13048808 - 13048933
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| |||| ||||| ||||||||| ||||| ||| ||||| | ||| ||||||||||||| ||||||| ||||| |  |||||||||| || |    
T  13048808 tagatagacggaatggcaaaaccattataaactcacacacataaatggaggtaccggggttcgaactccgatcatgacatccggcctaacaatttcgata 13048907  T
Q  155 ttttattaattgagctaggacttcta 180  Q
    |||||  | |||| |||||| |||||    
T  13048908 ttttaccagttgaactaggatttcta 13048933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 13053805 - 13053930
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| |||| ||||| ||||||||| ||||| ||| ||||| | ||| ||||||||||||| ||||||| ||||| |  |||||||||| || |    
T  13053805 tagatagacggaatggcaaaaccattataaactcacacacataaatggaggtaccggggttcgaactccgatcatgacatccggcctaacaatttcgata 13053904  T
Q  155 ttttattaattgagctaggacttcta 180  Q
    |||||  | |||| |||||| |||||    
T  13053905 ttttaccagttgaactaggatttcta 13053930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 13948230 - 13948106
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||| ||||||||| ||||| | | || || | |   ||||||||||| | |||||||| ||||||| |||||||||| || |    
T  13948230 tagatagacgaaatgacaaaaccattataaactcacaca-acaagtggaggcgccggggttcgaaccccgatcatagcatctgacctaacaatttcgata 13948132  T
Q  155 ttttattaattgagctaggacttcta 180  Q
    ||||| || ||||||||| |||||||    
T  13948131 ttttactagttgagctagaacttcta 13948106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 49632682 - 49632617
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||| |||||||||||||| ||||| ||| || || | ||||||||||||||||    
T  49632682 tagatagacgaaatgataaaatcattataaactcacacacacaagtggaggtatcggggttcgaac 49632617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 40685656 - 40685532
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| || || ||| ||||| | ||||||| ||||||| | || |||| ||||| || |||||||||| ||||    
T  40685656 tagatagacgaaatggcaaagccattataaactctcacacacaaatggaggtatcggagttcgaaccccggtcatgacatccgacctaacaatttcgaca 40685557  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  40685556 ttttgccagttgagctaggacttct 40685532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 15104172 - 15104045
Alignment:
Q  56 tagatagac-gaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    ||||||||| |||||| ||||  ||||||||| ||||| ||| || |  | |||||||||||||||| | |||||| ||||| |  |||||||||||| |    
T  15104172 tagatagacagaaatggcaaagccattataaactcacacacataagtagaggtatcggggttcgaaccccgatcatgacatccggcctaacaattttggc 15104073  T
Q  154 attttattaattgagctaggacttctag 181  Q
    ||||| | | ||||||||||||||||||    
T  15104072 attttgtcagttgagctaggacttctag 15104045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 17068278 - 17068155
Alignment:
Q  57 agatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacat 155  Q
    |||||||||||||||||||| ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  |||| |  |||||||||| | |||    
T  17068278 agatagacgaaatgacaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccgctcatggcatccggcctaacaatttcggcat 17068179  T
Q  156 tttattaattgagctaggacttct 179  Q
    ||||  | ||||||||||||||||    
T  17068178 tttaccagttgagctaggacttct 17068155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 52492682 - 52492805
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| ||| |||||||||| ||||| ||| || ||||   | ||||||||||| | | ||||| ||||| |  ||||||||||  |||    
T  52492682 tagatagacgaaatgataaagtcattataaactcacacacacaagtgaagaaaccggggttcgaaccccaatcatgacatccggcctaacaatttcaaca 52492781  T
Q  155 ttttattaattgagctaggacttc 178  Q
    |||||| ||||||||||| |||||    
T  52492782 ttttatcaattgagctagaacttc 52492805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 5511910 - 5511864
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatg 102  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  5511910 tagatagacgaaatgacaaaaccattataaactcacatacataaatg 5511864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 27856124 - 27856030
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattt 149  Q
    |||||||||||||||| ||| |||||||||| ||||| ||| || || ||||| |||| |||||| | ||||||| |||||||  ||||||||||    
T  27856124 tagatagacgaaatgaaaaagtcattataaactcacacacacaagtggaagtaccgggattcgaaccccgatcatgacatctggcctaacaattt 27856030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 43500144 - 43500266
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||||||| ||||| | ||| | | ||| ||| | |||||||| |||| || |||||||||| ||||    
T  43500144 tagatagacgaaatggcaaagccattataaactcacatacacaaatggaggtaccagagtttgaaccccgatcatagcatccgacctaacaatttcgaca 43500243  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||||  | |||||||| |||||    
T  43500244 ttttaccagttgagctaagactt 43500266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 43841780 - 43841882
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattttgacat 155  Q
    ||||||||| |||||| ||| | |||||||||||||| ||| || |||| |||||||||||| ||| |  |||||  ||| || |||||||||| |||||    
T  43841780 tagatagaccaaatgataaagtaattataaattcacagacacaagtgaaggtatcggggttctaacccagtcatagtatccgacctaacaatttcgacat 43841879  T
Q  156 ttt 158  Q
    |||    
T  43841880 ttt 43841882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 48731757 - 48731883
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || |  | ||| ||||||||||| | || ||||  ||||||  |||||||||| | ||    
T  48731757 tagatagacgaaatgacaaagccattataaactcacacacacaagtagaggtaccggggttcgaaccccggtcatggcatctggcctaacaatttcggca 48731856  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||| | | ||||||||||||||||||    
T  48731857 ttttgtcagttgagctaggacttctag 48731883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 49500988 - 49500866
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||   |||||||| ||||| ||| || || | ||| ||||||||||| ||||||||| ||||| |  |||||||||| | ||    
T  49500988 tagatagacgaaatgacaaagctattataaactcacacacacaagtggaggtaccggggttcgaacctcgatcatgacatccggcctaacaatttcggca 49500889  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  49500888 ttttgccagttgagctaggactt 49500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 11403296 - 11403172
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||| |||||||||||   |||||||| ||||| ||| ||||| | ||| ||||||||||| | |||||||  |||| || |||||||||| | ||    
T  11403296 tagatagaagaaatgacaaagctattataaactcacacacacaaatggatgtaccggggttcgaaccccgatcatggcatccgacctaacaatttcggca 11403197  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  11403196 ttttcccagttgagctaggacttct 11403172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 15485729 - 15485693
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15485729 tagatagacgaaatgacaaaatcattatagattcaca 15485693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 15906168 - 15906292
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||  ||||||||| ||||| ||| || || | ||| |||||||||||| | ||||||  ||||||  |||||||||| | ||    
T  15906168 tagatagacgaaatggtaaagccattataaactcacacacataagtggaggtaccggggttcgaaccctgatcatggcatctggcctaacaatttcggca 15906267  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||  || ||||||||||||||||    
T  15906268 ttttgctagttgagctaggacttct 15906292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 39467150 - 39467025
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||  |||| ||||||||| | ||| ||||   |||| ||| |||||||||||| | ||||||| ||||||  |||||||||||  |    
T  39467150 atagatagacgaaatggaaaaaccattataaacttacacacaag--tgaaggtaccggggttcgaaccccgatcatagcatctggcctaacaattttacc 39467053  T
Q  154 attttattaattgagctaggacttctag 181  Q
    |||||   | ||||||||||||||||||    
T  39467052 attttgccagttgagctaggacttctag 39467025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 49948368 - 49948244
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | |||  |||||||||| | || ||||  |||| |  |||||||||| ||||    
T  49948368 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtactggggttcgaatcccggtcatggcatccggcctaacaatttcgaca 49948269  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  49948268 ttttgccagttgagctaggacttct 49948244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 1576501 - 1576398
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| || || | ||| ||| ||||||| | || ||||  |||| |||| |||||||||| ||    
T  1576501 tagatagacgaaatgacaaaaccattataaactcacacacataagtggaggtaacggagttcgaaccccggtcatggcatccgatcaaacaattttggca 1576402  T
Q  155 tttt 158  Q
    ||||    
T  1576401 tttt 1576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 15952832 - 15952959
Alignment:
Q  56 tagatagacgaaatgacaaaatcattat-aaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||||||||  ||||| ||| ||||| ||| || || | ||| ||| ||||||| | ||||||||||||| || |||||||||| | |    
T  15952832 tagatagacgaaatgacaaaactattataaaactcacacacacaagtggaggtaccggagttcgaaccccgatcataacatccgacctaacaatttcggc 15952931  T
Q  154 attttattaattgagctaggacttctag 181  Q
    |||||   | |||||||| |||||||||    
T  15952932 attttgccagttgagctacgacttctag 15952959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 33845605 - 33845708
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||||| || |||| ||||| | ||||||||||| | ||    
T  33845605 tagatagacgaaatggcaaagccattataaactcacacacacaattggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcggca 33845704  T
Q  155 tttt 158  Q
    ||||    
T  33845705 tttt 33845708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 33948373 - 33948270
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||||| || |||| ||||| | ||||||||||| | ||    
T  33948373 tagatagacgaaatggcaaagccattataaactcacacacacaattggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcggca 33948274  T
Q  155 tttt 158  Q
    ||||    
T  33948273 tttt 33948270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 44623019 - 44623122
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||||||| || || ||||| ||  ||||||| | ||||||| ||||| |   |||||||||||| |    
T  44623019 tagatagacgaaatgacaaagccattataaactcacatacataagtggaagtaccgaagttcgaaccccgatcatgacatccggcttaacaattttgata 44623118  T
Q  155 tttt 158  Q
    ||||    
T  44623119 tttt 44623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 13874139 - 13874169
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaa 86  Q
    |||||||||||||||||||||||||||||||    
T  13874139 tagatagacgaaatgacaaaatcattataaa 13874169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 24254412 - 24254521
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| ||| |||||||||| ||||| ||| || ||  ||||  |||||||||| | ||||||| ||||||   |||||||||| ||||    
T  24254412 tagatagacgaaatgataaagtcattataaactcacacacacaagtg-gagtactggggttcgaaccccgatcatgacatctagcctaacaatttcgaca 24254510  T
Q  155 ttttattaatt 165  Q
    |||||| ||||    
T  24254511 ttttatcaatt 24254521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 43086472 - 43086594
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | |||||||  |||| |  |||||||||| | ||    
T  43086472 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggca 43086571  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  43086572 ttttgccagttgagctaggactt 43086594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 30455318 - 30455277
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacataca 96  Q
    |||||||||||||||| |||| |||||||||| |||||||||    
T  30455318 atagatagacgaaatggcaaagtcattataaactcacataca 30455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 39606532 - 39606467
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||||    
T  39606532 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaac 39606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 43676025 - 43676090
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || |||| ||| ||||||||||||    
T  43676025 tagatagacgaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaac 43676090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 4126702 - 4126578
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| |||||||||||| | ||||||  |||| |  ||||||||||   ||    
T  4126702 tagatagacgaaatggcaaaggcattataaactcacacacacaagtggaggtaccggggttcgaaccctgatcatggcatccggcctaacaatttccgca 4126603  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | ||||||||||||||||    
T  4126602 ttttgtcagttgagctaggacttct 4126578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 12663714 - 12663678
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  12663714 tagatagacgaaatgacaaagtcattataaactcaca 12663678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 19016900 - 19016936
Alignment:
Q  122 tcgatcataacatctgatctaacaattttgacatttt 158  Q
    |||||||  ||||||||||||||||||||||||||||    
T  19016900 tcgatcacgacatctgatctaacaattttgacatttt 19016936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 29510652 - 29510776
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||| |||||  ||| |||||||||| ||||| ||| || || ||||| |  ||||||||| | | |||| ||||| ||||||||||||||| ||    
T  29510652 tagatagacaaaatggtaaagtcattataaactcacacacacaagtggaagtaccaaggttcgaaccccggtcatgacatccgatctaacaattttggca 29510751  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||| ||||||||||    
T  29510752 ttttgacagttgagttaggacttct 29510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 34240109 - 34240157
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaa 104  Q
    |||||| |||||||||||||||| ||||||||||||  ||| |||||||    
T  34240109 tagatatacgaaatgacaaaatcgttataaattcacgcacataaatgaa 34240157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 39380228 - 39380276
Alignment:
Q  132 catctgatctaacaattttgacattttattaattgagctaggacttcta 180  Q
    |||| |||||||||| || |||||||||| | |||||||||||||||||    
T  39380228 catccgatctaacaacttcgacattttatcagttgagctaggacttcta 39380276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 41445031 - 41445155
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||| ||||| ||||| ||| || || | ||| ||||||||||||| ||||||| ||||| |  |||||||| | | ||    
T  41445031 tagatagacgaaatggcaaagccataataaactcacacacacaagtggaggtaccggggttcgaactccgatcatgacatccggcctaacaatgtcggca 41445130  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  41445131 ttttgccagttgagctaggacttct 41445155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 36540231 - 36540107
Alignment:
Q  57 agatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacat 155  Q
    ||||||||||||||||||| |||||||||| ||||| ||  || |||||||||||||||||||| |||  |||| |||||||  |||||||||| |||||    
T  36540231 agatagacgaaatgacaaagtcattataaactcacacacgcaagtgaaagtatcggggttcgaacctcagtcatgacatctggcctaacaatttcgacat 36540132  T
Q  156 tttattaattgagctaggacttcta 180  Q
    ||||  | |||| ||||||||||||    
T  36540131 tttaccacttgaactaggacttcta 36540107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 21402660 - 21402783
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||| ||||||||   ||||  ||| || || |||||||||||||||||| | |||||||||||||||| ||||||||| | |    
T  21402660 atagatagacgaaatgacaaagtcattatac--tcacccacataagtggaagtatcggggttcgaaccccgatcataacatctgatttaacaatttcggc 21402757  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   | ||||||||||||||||    
T  21402758 attttgccagttgagctaggacttct 21402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 25118707 - 25118833
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||||||||||||||||||| ||| |  || | ||| |||||||||||| | | ||||  |||| |  |||||||||| ||||    
T  25118707 tagatagacgaaatgacaaaatcattataaattcacacacacaggtggaggtaccggggttcgaaccctggtcatggcatccggcctaacaatttcgaca 25118806  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    ||||  || |||||||| |||||||||    
T  25118807 ttttgctagttgagctaagacttctag 25118833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 28731974 - 28731848
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| ||||| |||| ||||| ||| || |||| ||| |||| |||||| | |||||||  |||| || |||||||||| ||||    
T  28731974 tagatagacgaaatgacaaagtcattgtaaactcacacacacaagtgaaggtaccgggattcgaaccccgatcatggcatccgacctaacaatttcgaca 28731875  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||| | | ||||||||| ||||||||    
T  28731874 ttttgtcagttgagctagaacttctag 28731848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 47570410 - 47570288
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||| |||||||||| |||||||||| ||||| ||| ||||| | ||| |||||||||||| | ||| || ||||| |   ||||||||||||||    
T  47570410 tagatagacaaaatgacaaagtcattataaactcacacacataaatggaggtaccggggttcgaaccctgattatgacatccggcttaacaattttgaca 47570311  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||| | | ||||||||||||||    
T  47570310 ttttgtgagttgagctaggactt 47570288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 50238840 - 50238965
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||| ||||||||| ||||| ||| || || | ||| ||| ||||||||| |||||||  |||| |  |||||||||| |||    
T  50238840 atagatagacgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggagttcgaactccgatcatggcatccggcctaacaatttcgac 50238939  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||  | ||||||||||||||||    
T  50238940 attttaccagttgagctaggacttct 50238965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 40559801 - 40559677
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||||||| ||||||| | ||||||   |||| || |||||||||| | ||    
T  40559801 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtatcggagttcgaaccccgatcaaggcatccgacctaacaatttcggca 40559702  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||| | ||||||||||||||||    
T  40559701 ttttatcagttgagctaggacttct 40559677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 46311445 - 46311568
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| |||| |||||||||| ||||| ||| || || | ||||  |||||||||| || ||||| |||| |  |||||||||| ||||    
T  46311445 atagatagacgaaatggcaaagtcattataaactcacacacacaagtggaggtattagggttcgaac-cggtcatagcatccggcctaacaatttcgaca 46311543  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  46311544 ttttaccagttgagctaggacttct 46311568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 1339347 - 1339244
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| || || | | | ||||||||||| | ||||||| ||||| |||| |||||||| ||||    
T  1339347 tagatagacgaaatgacaaaaccattataaactcacacacacaagtggagggaccggggttcgaaccccgatcatgacatccgatcaaacaatttcgaca 1339248  T
Q  155 tttt 158  Q
    ||||    
T  1339247 tttt 1339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 54923613 - 54923510
Alignment:
Q  57 agatagacgaaatgacaaaatcattataaattcacataca-aaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| ||||||||||||| ||||||||||| ||| |||||| ||||||||| ||||||| | || |||| || || || |||||||||| ||||    
T  54923613 agatagacgagatgacaaaatcatcataaattcacacacacaaaatggaagtatcggagttcgaaccccggtcatgacgtccgacctaacaatttcgaca 54923514  T
Q  155 tttt 158  Q
    ||||    
T  54923513 tttt 54923510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 23879073 - 23878951
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||  ||||| |||| ||||| ||| || || | |||||||||||||||||| | |||| |||||||  |||||||||| | ||    
T  23879073 tagatagacgaaatgacaacgtcattgtaaactcacacacataagtggaggtatcggggttcgaactccagtcatgacatctggcctaacaatttaggca 23878974  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  23878973 tttttccagttgagctaggactt 23878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 45475233 - 45475359
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| || || | ||||||||||||||| | | ||||||||||| |  |||||||||| |  |    
T  45475233 tagatagacgaaatggcaaaaccattataaactcacacacacaagtggaggtatcggggttcgaaccccaatcataacatccggcctaacaatttcggta 45475332  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||||  | |||||||||| |||||||    
T  45475333 ttttaccagttgagctaggtcttctag 45475359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 23525912 - 23526038
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||||||| |||||||||| |||||  || || || | ||| ||| |||  ||| | ||||||| |||| || ||||||||||||||||||    
T  23525912 atagacgaaatgacaaagtcattataaactcaca--cataagtggaggtaccggagttataaccccgatcatagcatccgacctaacaattttgacattt 23526009  T
Q  158 tattaattgagctaggacttctagtttat 186  Q
    ||  |||||| ||||||||||||| ||||    
T  23526010 taccaattgaactaggacttctagattat 23526038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 12088283 - 12088407
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | |||||||| |||| |  |||||||||| ||||    
T  12088283 tagatagacgaaatgacaaatccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcgaca 12088382  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   || ||| |||||||||||    
T  12088383 tttttccaagtgatctaggacttct 12088407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 6083143 - 6083266
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattttgacat 155  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| || || | ||| ||| |||||||| || ||||   ||| |  |||||||||| | |||    
T  6083143 tagatagacgaaatgacaaaaccattataaactcacacacacaagtggaggtaccggagttcgaacccggtcatggtatccggcctaacaatttcggcat 6083242  T
Q  156 tttattaattgagctaggacttct 179  Q
    |||  || ||||||||||||||||    
T  6083243 tttgctagttgagctaggacttct 6083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 27002741 - 27002808
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| || || | ||| ||||||||||||||    
T  27002741 tagatagacgaaatgacaaaaccattataaactcacacacacaagtggaggtaccggggttcgaactc 27002808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 9174690 - 9174740
Alignment:
Q  125 atcataacatctgatctaacaattttgaca-ttttattaattgagctagga 174  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  9174690 atcataacgtctgatctaacaattttgacatttttatcaattgagctagga 9174740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 24250853 - 24250728
Alignment:
Q  56 tagatagacgaaatgacaaaatcattat-aaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||  |||||| ||| ||||| ||| ||||||| | | ||||||||||| | || ||||| |||| |  |||||||||| | |    
T  24250853 tagatagacgaaatgacaaagccattataaaactcacacacacaaatgaaggcaccggggttcgaaccccggtcatagcatccggcctaacaatttcggc 24250754  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   ||||||||||||||||||    
T  24250753 attttgccaattgagctaggacttct 24250728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 35359844 - 35359779
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | ||| ||||||||||||    
T  35359844 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccggggttcgaac 35359779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 42683055 - 42683120
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||| ||||||||| |||| ||||||||| ||||| ||| || || ||||||||||||||||||    
T  42683055 tagatatacgaaatgataaaaccattataaactcacacacataagtggaagtatcggggttcgaac 42683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 9318644 - 9318608
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9318644 tagatagacgaaatgacaaaatcattataaactcaca 9318608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 27719117 - 27719221
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| |||| ||||  ||||||||||||||| ||| ||||| | |||||| |||||||||| || |||| | ||| ||  ||||||||| ||||    
T  27719117 tagatagacggaatggcaaagccattataaattcacacacataaatggaggtatcgaggttcgaactccggtcatgatatccgacttaacaatttcgaca 27719216  T
Q  155 tttta 159  Q
    |||||    
T  27719217 tttta 27719221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 44037445 - 44037569
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||| |||||||||||| ||||||||| ||||| ||| || |  | ||| |||| |||||| ||||||||  ||||| || |||||||||| | ||    
T  44037445 tagatagatgaaatgacaaaaccattataaactcacacacataagtagaggtaccgggattcgaacctcgatcacgacatccgacctaacaatttcggca 44037544  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  44037545 ttttgccagttgagctaggacttct 44037569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 46894940 - 46894816
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||  || |||||| ||||| ||| || |||| ||||||||||||||| |||| ||||  |||| |  |||||||||| || |    
T  46894940 tagatagacgaaatggaaaagccaatataaactcacacacataagtgaaggtatcggggttcgaacctcggtcatggcatccggcctaacaatttcgata 46894841  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | ||||||||||||||||    
T  46894840 ttttgtcagttgagctaggacttct 46894816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 47410753 - 47410877
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| | ||||||||| | || |||| ||||| || |||||||||| ||||    
T  47410753 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccggtcatgacatccgacctaacaatttcgaca 47410852  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  47410853 ttttgccagttgagctaggacttct 47410877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 48191221 - 48191097
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| || || | |||  || ||||||| | || |||| ||||| |  |||||||||| | ||    
T  48191221 tagatagacgaaatgacaaaaccattataaactcacacacacaagtggaggtactggagttcgaaccccggtcatgacatccggcctaacaatttcggca 48191122  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  48191121 ttttagcagttgagctaggacttct 48191097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 51402951 - 51402883
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    |||||||||||||||||||||| ||||||||| ||||| ||| || || | ||| ||| ||||||||||    
T  51402951 atagatagacgaaatgacaaaaccattataaactcacacacacaagtggaggtaccggagttcgaactc 51402883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 48209432 - 48209499
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    |||||||||||||||||||| |||||||||  ||||| ||| |  |||| ||| ||||||||||||||    
T  48209432 tagatagacgaaatgacaaagtcattataagctcacacacatacgtgaaggtaccggggttcgaactc 48209499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 11076533 - 11076467
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||||    
T  11076533 atagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaac 11076467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 24751880 - 24751758
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||| ||| |||||||||||  ||||||||||||||| ||| || |||| ||| | ||||||||| | ||||||| ||||| |  |||||||||| | ||    
T  24751880 tagacagatgaaatgacaaagccattataaattcacacacacaagtgaaggtaccagggttcgaaccccgatcatgacatccggcctaacaatttcggca 24751781  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  24751780 ttttgccagttgagctaggactt 24751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 36518227 - 36518101
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | | | ||| | |||||| | | | ||  |||| || |||| ||||| | ||    
T  36518227 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggaaccggaggtcgaaccctggttatggcatccgacctaataatttcggca 36518128  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||| ||||||||||||||||||||||    
T  36518127 ttttgttaattgagctaggacttctag 36518101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 5349919 - 5349984
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||| |||||||||| |||| |||||||||| ||||| ||| ||||| | ||| ||||||||||||    
T  5349919 tagaaagacgaaatggcaaagtcattataaactcacaaacataaatggaggtaccggggttcgaac 5349984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 8826753 - 8826628
Alignment:
Q  56 tagatagacgaaatgacaaaatcattat-aaattcacatacaaaaatgaaagtatcggggttcga-actcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||| |||| ||||||| ||| ||||| ||| || || | ||| ||||||||||  | |||||||| |||| | ||||||||||| | |    
T  8826753 tagatagacgaaatggcaaagtcattataaaactcacacacacaagtggaggtaccggggttcgagccccgatcatagcatccggtctaacaatttcggc 8826654  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||| |   ||||||||||||||||    
T  8826653 attttgtccgttgagctaggacttct 8826628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 11250085 - 11250044
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  11250085 tagatagacgaaatgacaaagtcattataaactcacacacaa 11250044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 25312950 - 25313031
Alignment:
Q  79 attataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacatttta 159  Q
    |||||||| ||||||||| ||||| |||||||| |||||||| | || | || ||||| || |||||||||||| |||||||    
T  25312950 attataaactcacatacacaaatggaagtatcgaggttcgaatcccggttatgacatccgacctaacaattttggcatttta 25313031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 32635508 - 32635403
Alignment:
Q  55 atagatagacgaaa-tgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttga 152  Q
    |||||||||||||| ||||||| |||||||||| || || ||| || || | ||| ||||||||||| | ||||||| ||||| || |||| ||||| ||    
T  32635508 atagatagacgaaaatgacaaagtcattataaactcgcacacacaagtggaggtaccggggttcgaaccccgatcatgacatccgacctaataatttcga 32635409  T
Q  153 catttt 158  Q
    ||||||    
T  32635408 catttt 32635403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 34397807 - 34397742
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||||    
T  34397807 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaac 34397742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 45521067 - 45521108
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  45521067 tagatagacgaaatgacaaagtcattataaactaacatacaa 45521108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 47069134 - 47069069
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  47069134 tagatagacgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaac 47069069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 49285636 - 49285599
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  49285636 atagatagacgaaatgacaaagtcattataaactcaca 49285599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 52256753 - 52256818
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || || | ||| ||||||||||||    
T  52256753 tagatagacgaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaac 52256818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 3917893 - 3917769
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  3917893 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 3917794  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  3917793 ttttgccagttgagctaggacttct 3917769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 12948936 - 12948813
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  |||||||||  | || ||| || || |||||||||||||||||| | ||||||  |||| |  |||||||||| | ||    
T  12948936 tagatagacgaaatggcaaagccattataaaa-ctcacacacaagtggaagtatcggggttcgaaccccgatcatggcatccggcctaacaatttcgtca 12948838  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  12948837 ttttaccagttgagctaggacttct 12948813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 15003755 - 15003631
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| |  || | ||| ||||||||||| | || |||| ||||| || |||||||||||| ||    
T  15003755 tagatagacgaaatggcaaagccattataaactcacacacataggtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaattttggca 15003656  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | |||| |||||||||||    
T  15003655 ttttgccagttgaactaggacttct 15003631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 32960979 - 32961103
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  ||||||  |||||||||| | ||    
T  32960979 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatctggcctaacaatttcggca 32961078  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  32961079 ttttgccagttgagctaggacttct 32961103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 33886370 - 33886474
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||| ||||||||| ||||| ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| || |||||||||| | |    
T  33886370 atagattgacgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggc 33886469  T
Q  154 atttt 158  Q
    |||||    
T  33886470 atttt 33886474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 35107330 - 35107294
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||| |||||||||||||||||||||||| |||||    
T  35107330 tagataaacgaaatgacaaaatcattataaactcaca 35107294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 35966369 - 35966333
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  35966369 tagatagacgaaatgacaaagtcattataaactcaca 35966333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 38127843 - 38127967
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | | | ||||||||||| | || ||||| |||| |  |||||||||| ||||    
T  38127843 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggaaccggggttcgaaccccggtcatagcatccggcctaacaatttcgaca 38127942  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  38127943 ttttgccagttgagctaggacttct 38127967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 40192957 - 40193081
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| |||  || || ||||||||| ||||| ||| ||||| | ||||  ||||||||||| |||||||  |||| |  |||||||||| ||||    
T  40192957 tagatagacggaatagcacaaccattataaactcacacacacaaatggaggtataagggttcgaactccgatcatggcatccggcctaacaatttcgaca 40193056  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | || |||||||||||||    
T  40193057 ttttaccagttaagctaggacttct 40193081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 3043817 - 3043941
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||  |||| |||||||||| ||||| ||| || || | ||||||||||||||||| | ||||| ||||| |  ||||||||||  |||    
T  3043817 tagatagacgaaattgcaaagtcattataaactcacacacataagtggaggtatcggggttcgaactccaatcatgacatccggcctaacaatttcaaca 3043916  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||| ||||||||||||||||||    
T  3043917 ttttatcaattgagctaggacttct 3043941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 6071137 - 6071232
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaatttt 150  Q
    ||||||||||||||||||||||||||| |||||||||| ||| || ||||  || ||| |||||||| ||||||||||||| |  |||||||||||    
T  6071137 atagatagacgaaatgacaaaatcattttaaattcacacacacaagtgaagataccggagttcgaacccgatcataacatccggcctaacaatttt 6071232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 30627751 - 30627648
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| ||||| |||| ||||| ||| || || | ||| ||||||||||| ||||||||| ||||| ||||||||||||| ||||    
T  30627751 tagatagacgaaatgacaaagtcattgtaaactcacacacacaagtggaggtaccggggttcgaacctcgatcatgacatccgatctaacaatttcgaca 30627652  T
Q  155 tttt 158  Q
    ||||    
T  30627651 tttt 30627648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 40857342 - 40857465
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||| | |||||||||||||  ||| || || | ||| ||||||||||| | |||||||  |||| || |||||||||| |||    
T  40857342 atagatagacgaaatgacaaagttattataaattcac--acataagtggaggtaccggggttcgaaccccgatcatggcatccgacctaacaatttcgac 40857439  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||  | ||||||||||||||||    
T  40857440 attttaccatttgagctaggacttct 40857465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 10166997 - 10166873
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||||  ||||||||| ||||||||| || || | ||| | | |||||||| || ||||  |||| |  |||||||||| | ||    
T  10166997 atagatagacgaaatgacaaagccattataaactcacatacacaagtggaggtaccagagttcgaacccggtcatggcatccggcctaacaatttcggca 10166898  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||| | ||||||||||||||||    
T  10166897 ttttatcagttgagctaggacttct 10166873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 38261128 - 38261004
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || |||| |||||  |||| ||| |||| ||||  |||| |  |||||||||| ||||    
T  38261128 tagatagacgaaatgacaaagtcattataaactcacacacataagtgaaggtatccaggttagaacctcggtcatggcatccggcctaacaatttcgaca 38261029  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | ||||||||||||||||    
T  38261028 ttttgtcagttgagctaggacttct 38261004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 27339728 - 27339851
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||| |||||||||| ||||| ||| || || |  || || |||| ||||| || |||||||||| | |||||||||||| |     
T  27339728 atagatagacgaaatgacaaagtcattataaactcacacacacaagtggagataccgaggtttgaactacggtcataacatccggtctaacaattttaat 27339827  T
Q  154 attttattaattgagctaggactt 177  Q
    ||||| | | ||||||||||||||    
T  27339828 attttgtcacttgagctaggactt 27339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 2286094 - 2286216
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| ||||||||| |||||||||| ||||| ||| || || | ||| |||||||||||||| | ||||  |||| |  |||||||||||| ||    
T  2286094 tagatagacggaatgacaaagtcattataaactcacacacataagtggaggtagcggggttcgaactctggtcatggcatccggcctaacaattttggca 2286193  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||| | | ||||||||||||||    
T  2286194 ttttgtcagttgagctaggactt 2286216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 45237057 - 45236933
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||||||| || || | ||||||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  45237057 tagatagacgaaatggcaaagccattataaactcacatacacaagtggaggtatcggggttcgaaccccggtcatgacatccggcctaacaatttcggca 45236958  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  45236957 ttttgccagttgagctaggacttct 45236933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 48401290 - 48401413
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||| ||||||||||| ||||| |||||||||| ||| |||| || ||| |||  | |||| | |||||||| |||| || ||||||||||  |||    
T  48401290 tagatagaagaaatgacaaagtcattgtaaattcacacacacaaataaaggtaccggaatacgaaccccgatcatagcatccgacctaacaatttcaaca 48401389  T
Q  155 ttttattaattgagctaggacttc 178  Q
    ||||| |||||||  |||||||||    
T  48401390 ttttactaattgaattaggacttc 48401413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 41708593 - 41708663
Alignment:
Q  106 gtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca-ttttattaattgagctagga 174  Q
    |||||||||||||||| | |||||||||||| || ||||||||||||||| |||||| | |||||||||||    
T  41708593 gtatcggggttcgaaccccgatcataacatccgacctaacaattttgacatttttatcagttgagctagga 41708663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 28649366 - 28649491
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgac 153  Q
    |||||||| |||||||| ||| |||||||||| ||||| ||| || || | ||| || |||||||||| ||||||| ||||| || |||||||||| |      
T  28649366 atagatagtcgaaatgataaagtcattataaactcacacacacaagtggaggtaccgaggttcgaacttcgatcatgacatccgacctaacaatttcgct 28649465  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||  | ||||||||||| ||||    
T  28649466 attttaccagttgagctaggatttct 28649491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 44327767 - 44327643
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||   |||||||| ||||| ||| || || | |||| |||||||||| | || |||| ||||| |  |||||||||||||||    
T  44327767 tagatagacgaaatgacaaagctattataaactcacacacacaagtggaggtattggggttcgaattccggtcatgacatccggcctaacaattttgaca 44327668  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||| ||||    
T  44327667 ttttgccagttgagctaggaattct 44327643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 3861337 - 3861440
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| ||||    
T  3861337 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgaca 3861436  T
Q  155 tttt 158  Q
    ||||    
T  3861437 tttt 3861440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 48467937 - 48467814
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattttgacat 155  Q
    ||||||||||||||||||||  ||||||||| || || ||| || || | ||| | |||||||||| |  |||||||||| | ||||||||||| || ||    
T  48467937 tagatagacgaaatgacaaagccattataaactcgcacacacaagtggaggtaccagggttcgaaccccgtcataacatccggtctaacaatttcgatat 48467838  T
Q  156 tttattaattgagctaggacttct 179  Q
    |||   | ||||||||||| ||||    
T  48467837 tttgccagttgagctaggatttct 48467814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 42557503 - 42557625
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||||||||||||| ||||| ||| || || | ||| ||| |||| || | |||||||  |||| |  |||||||||| | ||    
T  42557503 tagatagacgaaatggcaaaatcattataaactcacacacataagtggaggtaccggagttcaaaccccgatcatggcatccggcctaacaatttcggca 42557602  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   ||||||||||||||||    
T  42557603 ttttgccaattgagctaggactt 42557625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 5222576 - 5222617
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    ||||||||||||||| |||| |||||||||| ||||||||||    
T  5222576 tagatagacgaaatggcaaagtcattataaactcacatacaa 5222617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 5723626 - 5723707
Alignment:
Q  78 cattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacatttt 158  Q
    ||||||||| ||||| ||| || || | ||||||| |||||||||| | |||||  |||||||||||||||||||| |||||    
T  5723626 cattataaactcacacacacaagtggaggtatcggagttcgaactccggtcatagtatctgatctaacaattttgatatttt 5723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 6327338 - 6327273
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || || | ||| ||||||||||||    
T  6327338 tagatagacgaaatggcaaagtcattataaactcacacacacaagtggatgtaccggggttcgaac 6327273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 17895761 - 17895696
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  17895761 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaac 17895696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 27396315 - 27396380
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  27396315 tagatagacgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaac 27396380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 41862912 - 41862790
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||   |||||||||||||  ||| || |||| ||| ||||||||||| | || | || ||||| || |||||||||| ||||    
T  41862912 tagatagacgaaatgacaaagctattataaattcac--acataagtgaaggtaccggggttcgaaccccggttatgacatccgacctaacaatttcgaca 41862815  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   |||| | |||||||||||    
T  41862814 ttttgccaattaaactaggacttct 41862790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 45041734 - 45041799
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || || | ||| ||||||||||||    
T  45041734 tagatagacgaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaac 45041799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 45594928 - 45594891
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  45594928 atagatagacgaaatgacaaagtcattataaactcaca 45594891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 48612644 - 48612579
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || |||| ||| ||||||||||||    
T  48612644 tagatagacgaaatggcaaagccattataaactcacacacataagtgaaggtaccggggttcgaac 48612579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 2228081 - 2228117
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  2228081 tagatagacgaaatgacaaagtcattataaactcaca 2228117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 4674310 - 4674434
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| | ||||||  ||||||||| | ||    
T  4674310 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgatatctgacttaacaatttcggca 4674409  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  4674410 ttttgccagttgagctaggacttct 4674434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 4887514 - 4887638
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||| ||||||||| |||| ||||  |||| |  |||||||||| | ||    
T  4887514 tagatagacgaaatggcaaagccattataaactcacacacacaagtggatgtatcagggttcgaacctcggtcatggcatccggcctaacaatttcggca 4887613  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  4887614 ttttgccagttgagctaggacttct 4887638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 7312454 - 7312578
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||  | ||||||||||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||||| ||    
T  7312454 tagatagacgaaatggtaaagccgttataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattttggca 7312553  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  7312554 ttttgccagttgagctaggacttct 7312578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 9907950 - 9907986
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  9907950 tagatagacgaaatgacaaaaccattataaactcaca 9907986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 25648157 - 25648197
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacataca 96  Q
    ||||||||||||||||||||  ||||||||||| |||||||    
T  25648157 tagatagacgaaatgacaaagccattataaatttacataca 25648197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 35157085 - 35157209
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  35157085 tagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 35157184  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  35157185 ttttgccagttgagctaggacttct 35157209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 43188659 - 43188623
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  43188659 tagatagacgaaatgacaaagtcattataaactcaca 43188623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 4874246 - 4874350
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||||||| ||||| | ||||||||||||||| | ||||||||||||| |  |||||||||| ||||    
T  4874246 tagatagacgaaatggcaaagccattataaactcacatacataaatggaggtatcggggttcgaaccccgatcataacatccgtcctaacaatttcgaca 4874345  T
Q  155 tttta 159  Q
    |||||    
T  4874346 tttta 4874350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 40199105 - 40199231
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||| ||||||||| ||||||||| || || | ||| |||||||||||| |||||||| |||||    |||||||||| | ||    
T  40199105 tagatagacgaaatggcaaaaccattataaactcacatacataagtggaggtaccggggttcgaacttcgatcatgacatccagcctaacaatttcggca 40199204  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||||| | ||||||||||| ||||||    
T  40199205 ttttatcagttgagctaggatttctag 40199231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 9068927 - 9068808
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||||||| |||||||||| ||||| |||  |||| | ||| ||||||||||| | |||||||  |||| || |||||||||| |||||||    
T  9068927 atagacgaaatgacaaagtcattataaactcacacacactaatggaggtaccggggttcgaaccccgatcatggcatccgacctaacaatttcgacattt 9068828  T
Q  158 tattaattgagctaggactt 177  Q
    ||  | ||||||||||||||    
T  9068827 taccagttgagctaggactt 9068808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 2706137 - 2706255
Alignment:
Q  62 gacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgacattttat 160  Q
    ||||||||||||||  ||||||||||||||| ||| || |||| ||||||| ||||||||| | |||||| ||||||| |||| ||||| | |||||||     
T  2706137 gacgaaatgacaaagccattataaattcacacacacaagtgaaggtatcggagttcgaactccaatcatagcatctgacctaataatttcggcattttac 2706236  T
Q  161 taattgagctaggacttct 179  Q
     | || |||||||||||||    
T  2706237 cagttaagctaggacttct 2706255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 17080592 - 17080468
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||| || |||||||| | |  |||| ||||| ||  ||||||||| ||||    
T  17080592 tagatagacgaaatgacaaaatcattataaattcacacacataagtggaggtaccgaggttcgaacccccgtcatgacatccgacttaacaatttcgaca 17080493  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | |||||||| |||||||    
T  17080492 ttttgtcagttgagctacgacttct 17080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 28391300 - 28391176
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| |||| |||||||||||| ||| ||| |||| || ||| | ||||||||||| |||||||  |||  || |||||||||| | ||    
T  28391300 tagatagacgaaatggcaaattcattataaatttacacacataaattaaggtagcagggttcgaactccgatcatggcattcgacctaacaatttcggca 28391201  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  |||| |||||||||||||    
T  28391200 ttttacgaatttagctaggacttct 28391176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 7670493 - 7670398
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaatttt 150  Q
    ||||||||| ||||||||||  ||| ||||| | ||||||| ||||||||||| ||||||||||| | ||||||| | ||| ||||||||||||||    
T  7670493 tagatagacaaaatgacaaagccatcataaacttacatacataaatgaaagtaccggggttcgaaccccgatcatgatatccgatctaacaatttt 7670398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 10011599 - 10011475
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaatt--cacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttga 152  Q
    ||||||||||||||||||||  |||||||||||  |||||||| || || | ||| ||| ||||||||| |||||||  |||| || |||||||||| ||    
T  10011599 tagatagacgaaatgacaaagccattataaattcacacatacataagtggaggtaccggagttcgaactccgatcatggcatccgacctaacaatttcga 10011500  T
Q  153 cattttattaattgagctaggactt 177  Q
    |||||||    ||||||||||||||    
T  10011499 cattttaccggttgagctaggactt 10011475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 671060 - 671184
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| |  || | ||||||||||||||| | ||||||| ||||| || |||||||||| | ||    
T  671060 tagatagacgaaatggcaaagtcattataaactcacacacacacgtggaggtatcggggttcgaaccccgatcatgacatccgacctaacaatttcggca 671159  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | |||| |||||||||||    
T  671160 ttttgccagttgaactaggacttct 671184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 1287442 - 1287318
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| |||| ||||  ||||||||| ||||| ||| || || | ||| |||||||||||| | | |||| ||||| || |||||||||| | ||    
T  1287442 tagatagacgtaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggca 1287343  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  ||||||||||||||||||    
T  1287342 ttttaccaattgagctaggacttct 1287318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 36136863 - 36136987
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||||| |||||||| ||||| ||| || || | ||| ||||||||||| | || ||||| |||  |  |||||||||| | ||    
T  36136863 tagatagacgaaatgacaaaattattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatagcattcggcctaacaatttcggca 36136962  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||  || ||||||||||||||||    
T  36136963 ttttgctagttgagctaggacttct 36136987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 37941043 - 37940919
Alignment:
Q  58 gatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacatt 156  Q
    ||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||| | |||||||  |||| |  |||||||||| ||||||    
T  37941043 gatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccgatcatggcatccggcctaacaatttcgacatt 37940944  T
Q  157 ttattaattgagctaggacttctag 181  Q
    ||   | ||||||||||||||||||    
T  37940943 ttgccagttgagctaggacttctag 37940919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 972595 - 972698
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || |  | ||| |||||||||||| | | ||||| |||| || |||||||||| ||||    
T  972595 tagatagacgaaatgacaaagtcattataaactcacacacacaagtagaggtaccggggttcgaaccctggtcatagcatccgacctaacaatttcgaca 972694  T
Q  155 tttt 158  Q
    ||||    
T  972695 tttt 972698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 24638081 - 24637958
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| ||| |||||||||| ||||| ||| || ||||   | ||||||||||| | | ||||| ||||| |  ||||||||||  |||    
T  24638081 tagatagacgaaatgataaagtcattataaactcacacacacaagtgaagaaaccggggttcgaaccccaatcatgacatccggcctaacaatttcaaca 24637982  T
Q  155 ttttattaattgagctaggacttc 178  Q
    |||||| ||||||||||| |||||    
T  24637981 ttttatcaattgagctagaacttc 24637958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 32466698 - 32466572
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaa--tgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttga 152  Q
    |||||||| |||||||||||  ||||||||||||||| ||| | |  || | |||||||||||||||||| | ||||| |||| |  |||| ||||| ||    
T  32466698 tagatagatgaaatgacaaagccattataaattcacacacacataagtggaggtatcggggttcgaactccggtcatagcatccggcctaataatttcga 32466599  T
Q  153 cattttattaattgagctaggacttct 179  Q
    |||||||| | |||| |||||||||||    
T  32466598 cattttatcagttgaactaggacttct 32466572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 35932978 - 35933081
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||||||||||||| ||||| ||| || || |||||  |||||||||| | ||||||||| |||  | ||||||||||  |||    
T  35932978 tagatagacgaaatggcaaaatcattataaactcacacacataagtggaagtactggggttcgaaccccgatcataatatccaacctaacaatttctaca 35933077  T
Q  155 tttt 158  Q
    ||||    
T  35933078 tttt 35933081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 28489311 - 28489253
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcgggg 114  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || ||||||||||||||    
T  28489311 tagatagacgaaatggcaaagtcattataaactcacacacataagtgaaagtatcgggg 28489253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 9053972 - 9054037
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||||||||||||||||    
T  9053972 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtatcggggttcgaac 9054037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 10458854 - 10458729
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattc-acatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    ||||||||| |||||||||| |||||||||| || ||| | | || || | ||| |||||||||||| | ||||||| |||| |  |||||||||||| |    
T  10458854 tagatagacaaaatgacaaagtcattataaaatccacacatacaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaattttggc 10458755  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||  ||||||| ||||||||||    
T  10458754 attttaccaattgagttaggacttct 10458729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 12878121 - 12878243
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||  ||| || || | |||||||||||||||| |||||||| ||||| |  |||||||||| | ||    
T  12878121 tagatagacgaaatggcaaagccattataaactcac--acacaagtggaggtatcggggttcgaacttcgatcatgacatccggcctaacaatttcggca 12878218  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  12878219 ttttgccagttgagctaggacttct 12878243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 24051530 - 24051465
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||| |||||||||| ||||||||| || || | ||| | ||||||||||    
T  24051530 tagatagacgaaatgacaaagtcattataaactcacatacacaagtggaggtaccagggttcgaac 24051465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 29402137 - 29402096
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  29402137 tagatagacgaaatgacaaaatcattataaactcacacacaa 29402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 35232663 - 35232566
Alignment:
Q  63 acgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacatttta 159  Q
    ||||||||||||| |||||||||| ||||| ||| || |||| |||||||||| |||| | | ||||| ||||  ||||||||||||| | |||||||    
T  35232663 acgaaatgacaaagtcattataaactcacacacacaagtgaaggtatcggggtccgaaccccaatcatgacattcgatctaacaatttcgtcatttta 35232566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 36319503 - 36319568
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||||||||| ||| || || | ||| ||||||||||||    
T  36319503 tagatagacgaaatgacaaagccattataaattcacacacacaagtggaggtaccggggttcgaac 36319568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 40596083 - 40596018
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | ||| ||||||||||||    
T  40596083 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccggggttcgaac 40596018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 41071189 - 41071072
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||||| |||||||  || | |  |||||||||| | ||    
T  41071189 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaactccgatcatggcacccggcctaacaatttcggca 41071090  T
Q  155 ttttattaattgagctag 172  Q
    |||||  |||||||||||    
T  41071089 ttttaccaattgagctag 41071072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 42645464 - 42645588
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaatt--cacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttga 152  Q
    ||||||||||||||||||||  ||||||||| |  |||||||| || || | ||| || |||||||| | ||||||| ||||| ||||||| ||||||      
T  42645464 tagatagacgaaatgacaaagccattataaactcacacatacataagtggaggtaccgaggttcgaaccccgatcatgacatccgatctaataattttag 42645563  T
Q  153 cattttattaattgagctaggactt 177  Q
    |||||||  | ||||||||||||||    
T  42645564 cattttaccagttgagctaggactt 42645588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 29806694 - 29806570
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || |||| ||| |||||||||||| | | ||||  |||| |  |||||||||||| ||    
T  29806694 tagatagacgaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccagtcatggcatccggcctaacaattttggca 29806595  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||| ||||    
T  29806594 ttttaccagttgagctaggatttct 29806570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 36185264 - 36185140
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||   |||||||||||||  ||| || || | ||| ||||||||||| | ||||||| | |||||| |||||||||| ||||    
T  36185264 tagatagacgaaatggcaaagctattataaattcacgcacacaagtggaggtaccggggttcgaaccccgatcatgatatctgacctaacaatttcgaca 36185165  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||| ||||    
T  36185164 ttttgccagttgagctaggatttct 36185140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 6053055 - 6053178
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||||| ||   || | ||| |||||||||||| | | |||| ||||| || |||||||||| | ||    
T  6053055 tagatagacgaaatgacaaac-cattataaactcacatataag--tggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggca 6053151  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||| | | ||||||||||||||||||    
T  6053152 ttttgtcagttgagctaggacttctag 6053178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 10165659 - 10165537
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||  |||| |||||||||| ||||| ||| || || | ||| ||||||||||| | |||||||  |||| | ||||||||||| | ||    
T  10165659 tagatagacgaaatagcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggtctaacaatttcggca 10165560  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   ||||||| ||||||||    
T  10165559 ttttgccaattgagttaggactt 10165537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 12769126 - 12769248
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||| ||||||||| ||||| ||| || || | |||| ||||||||||||| | | ||  |||| || |||||||||| | ||    
T  12769126 tagatagacgaaatggtaaaaccattataaactcacacacacaagtggaggtattggggttcgaactctggtgatggcatccgacctaacaatttcggca 12769225  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||||  | ||||||||||||||    
T  12769226 ttttaccagttgagctaggactt 12769248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 25328305 - 25328431
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| |||| ||||  |||| |  |||||||||| | ||    
T  25328305 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggca 25328404  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    ||||   | ||||||||||||||||||    
T  25328405 ttttgccagttgagctaggacttctag 25328431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 1833320 - 1833385
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||||    
T  1833320 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaac 1833385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 5029947 - 5029910
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacataca 96  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  5029947 atagacgaaatggcaaaatcattataaattcacgtaca 5029910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 6672368 - 6672303
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  6672368 tagatagacgaaatggcaaaaccattataaactcacacacacaagtggaggtaccggggttcgaac 6672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 10393503 - 10393568
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  10393503 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaac 10393568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 17869125 - 17869190
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||||||||| ||| || || | ||| ||||||||||||    
T  17869125 tagatagacgaaatggcaaagccattataaattcacacacataagtggaggtaccggggttcgaac 17869190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 18990535 - 18990600
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||| ||| |||||||||| |||||  || ||||| |  |||||||||||||||    
T  18990535 tagatagacgaaatgataaagtcattataaactcacacgcacaaatgtagatatcggggttcgaac 18990600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 19867282 - 19867347
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||| |||||||||||| |||||||||| ||||| ||| || |||| |||  |||||||||||    
T  19867282 tagataggcgaaatgacaaagtcattataaactcacacacataagtgaaggtactggggttcgaac 19867347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 32273979 - 32274020
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  32273979 tagatagacgaaatgacaaagtcattataaactcacacacaa 32274020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 33028354 - 33028233
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||  |||  ||||||||| ||||| ||| || || ||||| ||||||||||| | || |||| ||||| |  |||||||||||| |||||    
T  33028354 atagacgaaatggtaaagccattataaactcacacacataagtggaagtaccggggttcgaaccccggtcatgacatccggcctaacaattttggcattt 33028255  T
Q  158 tattaattgagctaggacttct 179  Q
    | | | |||| |||||||||||    
T  33028254 tgtcagttgaactaggacttct 33028233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 33201661 - 33201759
Alignment:
Q  61 agacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgacatttta 159  Q
    |||||| |||||||||| |||||||| | ||| ||||   |||| ||||||| |||||||| || ||||||| ||  | |||||||||||||||||||||    
T  33201661 agacgagatgacaaaattattataaacttacaaacaat--tgaaggtatcggagttcgaacctcaatcataatattcggtctaacaattttgacatttta 33201758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 36245995 - 36246060
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || || | ||| ||||||||||||    
T  36245995 tagatagacgaaatgtcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaac 36246060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 40318786 - 40318851
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||||    
T  40318786 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaac 40318851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 1277565 - 1277529
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  1277565 tagatagacgaaatgacaaagtcattataaactcaca 1277529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 4165086 - 4164962
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  4165086 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 4164987  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  4164986 ttttgccagttgagctaggacttct 4164962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 4429944 - 4430068
Alignment:
Q  58 gatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacatt 156  Q
    |||||||||||||| ||| | |||||||| ||||| ||| || || | ||||||||||| ||| | || |||| ||||| |  |||||||||| ||||||    
T  4429944 gatagacgaaatgataaagttattataaactcacacacataagtggaggtatcggggtttgaaccccggtcatgacatccggcctaacaatttcgacatt 4430043  T
Q  157 ttattaattgagctaggacttctag 181  Q
    |||  | ||||||||| | ||||||    
T  4430044 ttaccagttgagctagaatttctag 4430068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 7809702 - 7809666
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  7809702 tagatagacgaaatgacaaaaccattataaactcaca 7809666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 12707877 - 12708001
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||| ||||||||| ||||| ||| || || | |||| ||||||||||||| | | ||  |||| || |||||||||| | ||    
T  12707877 tagatagacgaaatggtaaaaccattataaactcacacacacaagtggaggtattggggttcgaactctggtgatggcatccgacctaacaatttcggca 12707976  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  12707977 ttttgccagttgagctaggacttct 12708001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 13271185 - 13271217
Alignment:
Q  145 aattttgacattttattaattgagctaggactt 177  Q
    |||||||||||||||||||||||| ||||||||    
T  13271185 aattttgacattttattaattgagttaggactt 13271217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 19836088 - 19836124
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  19836088 tagatagacgaaatgacaaagtcattataaactcaca 19836124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 22096754 - 22096790
Alignment:
Q  123 cgatcataacatctgatctaacaattttgacatttta 159  Q
    ||||||| | |||||||||||||||||||||||||||    
T  22096754 cgatcatgatatctgatctaacaattttgacatttta 22096790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 23219115 - 23219151
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  23219115 tagatagacgaaatgacaaagtcattataaactcaca 23219151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 24443868 - 24443992
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||| ||| | || |||||||||| || |||||||||| |  |    
T  24443868 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggtttgaaccccggtcataacatccgacctaacaatttcggta 24443967  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  24443968 ttttgccagttgagctaggacttct 24443992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 26310749 - 26310785
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  26310749 tagatagacgaaatgacaaagtcattataaactcaca 26310785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 27003964 - 27004000
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  27003964 tagatagacgaaatgacaaagtcattataaactcaca 27004000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 28870077 - 28870041
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  28870077 tagatagacgaaatgacaaaaccattataaactcaca 28870041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 15488876 - 15488750
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || ||   ||| | |||||||||||| | |||| ||||| |  |||||||||| | ||    
T  15488876 tagatagacgaaatgacaaagtcattataaactcacacacacaagtgggggtaccagggttcgaactccggtcatgacatccggcctaacaatttcggca 15488777  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||||||| ||||||||||||||||||    
T  15488776 ttttattagttgagctaggacttctag 15488750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 39218809 - 39218684
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaat-tcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||||||| ||||||||||  ||||| | | || || | ||| |||||||||||| | |||||||||||| || |||||||||| | |    
T  39218809 tagatagacgaaatgacaaagtcattataaaactcacacatacaagtggaggtaccggggttcgaaccccgatcataacatccgacctaacaatttcggc 39218710  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   ||||||||||||||||||    
T  39218709 atttttcgaattgagctaggacttct 39218684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 43461335 - 43461459
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  |||| |  |||||||||| ||||    
T  43461335 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcgaca 43461434  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  43461435 ttttaccagttgagctaggacttct 43461459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 18055986 - 18055883
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| ||||| | ||| || |||||||| | ||||||| ||||| |  ||| |||||||||||    
T  18055986 tagatagacgaaatgacaaagtcattataaactcacacacacaaatggaggtaacgcggttcgaaccccgatcatgacatccggcctagcaattttgaca 18055887  T
Q  155 tttt 158  Q
    ||||    
T  18055886 tttt 18055883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 8293556 - 8293649
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaatt 148  Q
    ||||||||||||||||||||  ||||||||||||||| ||| || || | |||||||| |||||| |||||||||| |||| |  |||||||||    
T  8293556 tagatagacgaaatgacaaagccattataaattcacacacataagtggaggtatcgggattcgaacctcgatcatagcatccggcctaacaatt 8293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 16534943 - 16535068
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||||||||   |||||||| ||||| ||  || || |  || |||||||||||||| |||||| ||||| |  |||||||||| |||    
T  16534943 atagatagacgaaatgacaaagctattataaactcacacacccaagtggagttaccggggttcgaactccgatcatgacatccggcctaacaatttcgac 16535042  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||| | |||| |||||||||||    
T  16535043 attttatcagttgaactaggacttct 16535068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 38463267 - 38463142
Alignment:
Q  56 tagatagacgaaa-tgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||| || ||||  ||||||||||||||| ||| || || | ||||||||||||||| | ||||||||||||| || |||||||||| | |    
T  38463267 tagatagacgaaaatggcaaagccattataaattcacacacacaagtggaggtatcggggttcgaaccccgatcataacatccgacctaacaatttcggc 38463168  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   | |||||||| |||||||    
T  38463167 attttgccagttgagctaagacttct 38463142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 11816777 - 11816901
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||| |||||||||||  ||||||||| | ||| ||| || || | ||| |||||||||||| || || ||| |||| |  |||||||||| ||||    
T  11816777 tagatagatgaaatgacaaagccattataaacttacacacacaagtggaggtaccggggttcgaacctcaataatagcatccggcctaacaatttcgaca 11816876  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  ||||||||||||||||||    
T  11816877 ttttaccaattgagctaggacttct 11816901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 40812144 - 40812020
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || |||| ||| ||||||||||| | || |||| ||||| || |||||||||| | ||    
T  40812144 tagatagacgaaatggcaaagccattataaactcacacacataagtgaaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggca 40812045  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | ||||| ||||||||||    
T  40812044 ttttgtcagttgaggtaggacttct 40812020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 42211405 - 42211341
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa 120  Q
    |||||||||||||||||||||  |||| ||| ||||||||| ||||| | |||||||||||||||    
T  42211405 tagatagacgaaatgacaaaactattaaaaactcacatacataaatggaggtatcggggttcgaa 42211341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 6598524 - 6598485
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacata 94  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  6598524 atagatagacgaaatgacaaagtcattataaattcacata 6598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 25994654 - 25994747
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaatttt 150  Q
    |||||| |||| |||| ||| |||| ||||| ||||| | |||| || ||||||||| |||||||| |||||||||| || ||||||||||||||    
T  25994654 tagataaacgagatgataaagtcatcataaactcacacataaaa-tggaagtatcggagttcgaacccgatcataacgtccgatctaacaatttt 25994747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 36685404 - 36685506
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| | |||||||| ||||| ||| || || | ||||| ||||||||| | ||||||| ||||| |  |||||||||| ||||    
T  36685404 tagatagacgaaatgacaaagttattataaactcacacacacaagtggaggtatcagggttcgaaccccgatcatgacatccggcctaacaatttcgaca 36685503  T
Q  155 ttt 157  Q
    |||    
T  36685504 ttt 36685506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 41520625 - 41520531
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattt 149  Q
    ||||||||||||| | ||||||||||||||| ||| | ||| ||||| | |||||||| ||| || | ||||||| |||||||| ||||||||||    
T  41520625 tagatagacgaaaaggcaaaatcattataaactcatacacacaaatggaggtatcgggattcaaaccccgatcatgacatctgacctaacaattt 41520531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 727289 - 727414
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||| ||||||| | |||||||  |||| || |||||||||| | |    
T  727289 atagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggagttcgaaccccgatcatggcatccgacctaacaatttcggc 727388  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||| | | ||||||||||||||||    
T  727389 attttgtcagttgagctaggacttct 727414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 8859291 - 8859412
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||||||| |||||||||| | ||| ||| || || | ||||||||||||||| | | ||||| ||||| |  |||||||||| |||||||    
T  8859291 atagacgaaatgacaaagtcattataaactgacacacacaagtggaggtatcggggttcgaaccccaatcatgacatccggcctaacaatttcgacattt 8859390  T
Q  158 tattaattgagctaggacttct 179  Q
    |  || |||| |||| ||||||    
T  8859391 tgctagttgaactagaacttct 8859412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 42200866 - 42200987
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||  |||||||||||||| ||||| ||| || || | ||| || |||||||| | ||||||| ||||| |  |||||||||||| |||||    
T  42200866 atagacgaaatggaaaaatcattataaactcacacacacaagtggaggtaccgaggttcgaaccccgatcatgacatccggcctaacaattttggcattt 42200965  T
Q  158 tattaattgagctaggacttct 179  Q
    |   | ||||||||||||||||    
T  42200966 tgccagttgagctaggacttct 42200987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 6731669 - 6731545
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  6731669 tagatagacgaaatggcaaagccattataaactcacacacacaagtggatgtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 6731570  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||  || ||||||||||||||||    
T  6731569 ttttgctagttgagctaggacttct 6731545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 12236248 - 12236124
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||||||||| ||| || || | ||| ||||||||||| | || ||||  |||| |  |||||||||| | ||    
T  12236248 tagatagacgaaatggcaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggca 12236149  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  12236148 ttttaccagttgagctaggacttct 12236124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 12541339 - 12541431
Alignment:
Q  58 gatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattt 149  Q
    ||||||||||||||||||  ||||||||| ||||| ||| || |||| ||| || |||||||| | ||||||| ||||| || ||||||||||    
T  12541339 gatagacgaaatgacaaagccattataaactcacacacacaagtgaaggtaccgaggttcgaaccccgatcatgacatccgacctaacaattt 12541431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 13267976 - 13268100
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| || |||||||||| | ||    
T  13267976 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggca 13268075  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  13268076 ttttgccagttgagctaggacttct 13268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 23957179 - 23957055
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||| ||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| ||||    
T  23957179 tagatagacgaaatgacaaagccattaaaaactcacacacataagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgaca 23957080  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||| ||||||    
T  23957079 ttttgccagttgagctagaacttct 23957055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 33607170 - 33607046
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | |||||||||||||||| | | ||||  ||||||  |||||||||| | ||    
T  33607170 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccagtcatggcatctggcctaacaatttcggca 33607071  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  33607070 ttttgccagttgagctaggacttct 33607046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 34667171 - 34667047
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||||| || |||| ||||| |  |||||||||| | ||    
T  34667171 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccggcctaacaatttcggca 34667072  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  34667071 ttttgccagttgagctaggacttct 34667047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 12203648 - 12203540
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaat----tcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaatttt 150  Q
    ||||||||| |||||||||  | |||||||||    ||||||| | ||||| | || || |||||||||| | |||||| ||||| ||||||||||||||    
T  12203648 tagatagacaaaatgacaaggttattataaataaactcacatagacaaatggatgtgtcagggttcgaaccttgatcattacatccgatctaacaatttt 12203549  T
Q  151 gacatttta 159  Q
    |||||||||    
T  12203548 gacatttta 12203540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 3048669 - 3048547
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| |||  ||||| ||| ||||| ||| || || | ||| |||||||||||| | ||||||  |||| |  |||||||||| ||||    
T  3048669 tagatagacgaaatgataaagccattaaaaactcacacacataagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcgaca 3048570  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||  || ||||||||||||||    
T  3048569 ttttgctagttgagctaggactt 3048547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 19832277 - 19832236
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  19832277 tagatagacgaaatgacaaagtcattataaactaacatacaa 19832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 23497513 - 23497578
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  23497513 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaac 23497578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 39310490 - 39310369
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacattt 157  Q
    |||||||||||||||||   |||||||| ||||| ||| || || |  || ||| |||||||| | |||||||||||| |  |||||||||| || ||||    
T  39310490 atagacgaaatgacaaagctattataaactcacacacacaagtggagttaccggagttcgaaccccgatcataacatccggcctaacaatttcgatattt 39310391  T
Q  158 tattaattgagctaggacttct 179  Q
    |  || ||||||||||||||||    
T  39310390 tgctagttgagctaggacttct 39310369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 4190441 - 4190405
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| | ||||||||||||||    
T  4190441 tagatagacgaaatgacaaactgattataaattcaca 4190405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 15897341 - 15897217
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  15897341 tagatagacgaaatggcaaaggcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 15897242  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  15897241 ttttgccagttgagctaggacttct 15897217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 19967861 - 19967825
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  19967861 tagatagacgaaatgacaaagtcattataaactcaca 19967825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 20251486 - 20251610
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | |||||||  |||| |  |||||||||| | ||    
T  20251486 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggca 20251585  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  20251586 ttttgccagttgagctaggacttct 20251610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 30854739 - 30854799
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcga 119  Q
    ||||||||||||||||||  |||||||| ||||| ||| || |||| ||| ||||||||||    
T  30854739 atagacgaaatgacaaaacaattataaactcacacacacaagtgaaggtaccggggttcga 30854799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 31524956 - 31525020
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    |||||||||||| |||| |||||||||| ||||| ||| || || | ||| ||||||||||||||    
T  31524956 atagacgaaatggcaaagtcattataaactcacacacacaagtggaggtaacggggttcgaactc 31525020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 35706979 - 35706855
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||| | |||| |||||||||| ||||| ||| || |  |||||  | ||||||||| | | |||| ||||| || |||||||||| ||||    
T  35706979 tagatagacgaaacggcaaagtcattataaactcacacacataagtagaagtactgaggttcgaaccccagtcatgacatccgacctaacaatttcgaca 35706880  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  35706879 ttttgccagttgagctaggacttct 35706855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 36754742 - 36754866
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||| |||| |  |||||||||| | ||    
T  36754742 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcggca 36754841  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  36754842 ttttgccagttgagctaggacttct 36754866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 37644233 - 37644341
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||   |||||||| | ||| ||| || || | ||||||||||||||| | |||||||  |||| |  |||||||||| |||    
T  37644233 atagatagacgaaatggcaaagctattataaacttacacacacaagtggaggtatcggggttcgaaccccgatcatggcatccggcctaacaatttcgac 37644332  T
Q  154 attttatta 162  Q
    |||||||||    
T  37644333 attttatta 37644341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 43841716 - 43841780
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    ||||||||||||| ||| |||||||||| ||||| ||| || || | ||||||| ||||||||||    
T  43841716 atagacgaaatgagaaagtcattataaactcacacacacaagtggaggtatcggagttcgaactc 43841780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 36752486 - 36752362
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||||| | || || | ||||||||||||||| | ||||||| |||||||  |||||||||| | ||    
T  36752486 tagatagacgaaatgacaaagccattataaactcacatatataagtggaggtatcggggttcgaaccccgatcatgacatctggcctaacaatttcggca 36752387  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | ||||| ||||||||||    
T  36752386 ttttgtcagttgagttaggacttct 36752362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 579243 - 579367
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| ||||    
T  579243 tagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcgaca 579342  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||| | ||||||||||| ||||    
T  579343 ttttatcagttgagctaggatttct 579367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 13218324 - 13218221
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||||||||||||| ||||| | | || || |||||  |||||||||| | |||||||  |||| || |||||||||||||||    
T  13218324 tagatagacgaaatggcaaaatcattataaactcacacatacaagtggaagtactggggttcgaaccccgatcatggcatccgacctaacaattttgaca 13218225  T
Q  155 tttt 158  Q
    ||||    
T  13218224 tttt 13218221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 5060412 - 5060535
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||| ||||||||||| | |||||||| ||||  ||| || |||| ||||||||||||||||  ||||||| | ||| |  |||||||||| |||    
T  5060412 atagatagatgaaatgacaaagttattataaactcac--acataagtgaaggtatcggggttcgaacgccgatcatgatatccggactaacaatttcgac 5060509  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||| | ||||| ||||||||||    
T  5060510 attttatcagttgagttaggacttct 5060535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 17481060 - 17480994
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||||  ||||||||| ||||||||| || || ||||| ||||||||||||    
T  17481060 atagatagacgaaatgacaaagccattataaactcacatacataagtggaagtaccggggttcgaac 17480994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 24407624 - 24407502
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||| |  ||||||||||||||| ||| || |||| ||| ||||||||||| | || ||||  |||| || |||||||||| ||||    
T  24407624 tagatagacgaaatgacagagccattataaattcacacacacaagtgaaggtaccggggttcgaatcccggtcatggcatccgacctaacaatttcgaca 24407525  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  24407524 ttttgccagttgagctaggactt 24407502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 1083636 - 1083511
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| | ||| ||| || || | ||||||||||||||| | ||||||| |||||||| |||||||||| | |    
T  1083636 atagatagacgaaatggcaaagccattataaacttacacacacaagtggaggtatcggggttcgaaccccgatcatgacatctgacctaacaatttcggc 1083537  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   | |||| |||||||||||    
T  1083536 attttgccagttgaactaggacttct 1083511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 41323662 - 41323537
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgac 153  Q
    |||||||||||||| |  ||| | |||||||| ||||| ||| || |||| ||| |||||||||||| | | ||||| |||| ||||||||||||| |||    
T  41323662 atagatagacgaaacggtaaagttattataaactcacacacagaagtgaaggtaccggggttcgaaccccaatcatagcatccgatctaacaatttcgac 41323563  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||||| | ||||| ||| ||||||    
T  41323562 attttatcagttgagttagaacttct 41323537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 46107505 - 46107417
Alignment:
Q  72 caaaatcattataaattcacatacaaaaa-tgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacatttt 158  Q
    |||| |||| ||||||||||| ||| ||| || | ||||||||||||||| ||||||||| || |||||||||| ||||||||||||||    
T  46107505 caaattcatcataaattcacacacataaagtggaggtatcggggttcgaatctcgatcatgacgtctgatctaataattttgacatttt 46107417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 46553053 - 46552949
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||| ||||||||||||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||||| |    
T  46553053 atagatagacgaaatggcaaaaccattataaattcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaattttggc 46552954  T
Q  154 atttt 158  Q
    |||||    
T  46552953 atttt 46552949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 54864523 - 54864399
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || |  | ||| || ||||| || | |||||||  |||| || |||||||||||||||    
T  54864523 tagatagacgaaatgacaaagtcattataaactcacacacacaagttgaggtaccgaggttcaaaccccgatcatggcatccgacctaacaattttgaca 54864424  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||  || |||| |||||||||||    
T  54864423 ttttgctagttgatctaggacttct 54864399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 2402306 - 2402247
Alignment:
Q  118 gaactcgatcataacatctgatctaacaattttgacattttattaattgagctaggactt 177  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||||    
T  2402306 gaacccgatcatagcatctgacctaacaatttcaacattttatcaattgagctaggactt 2402247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 48628464 - 48628587
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| |||||||  || |||||||||||| | | ||||  ||||  |||||||||||||| |    
T  48628464 atagatagacgaaatggcaaagccattataaactcacacacacaaatgaagataccggggttcgaaccccagtcatggcatccaatctaacaattttggc 48628563  T
Q  154 attttattaattgagctaggactt 177  Q
    | ||||  | ||||||||||||||    
T  48628564 actttaccagttgagctaggactt 48628587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 51281596 - 51281526
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaa--tgaaagtatcggggttcgaactc 123  Q
    ||||||||||||||||||||| |||||||||||||||| ||| | |  || | ||||||||||||||||||    
T  51281596 atagatagacgaaatgacaaagtcattataaattcacacacacacaagtggaggtatcggggttcgaactc 51281526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 54096941 - 54097044
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgaca 154  Q
    |||| ||||||||||||||| |||||||||| ||||| ||| || || | ||| |||||||||||| ||| |||| ||||| ||||||| ||||| | ||    
T  54096941 tagacagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccggggttcgaacgtcggtcatgacatccgatctaataatttcggca 54097040  T
Q  155 tttt 158  Q
    ||||    
T  54097041 tttt 54097044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 47462037 - 47462163
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  |||| |  |||||||||| | ||    
T  47462037 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttcggca 47462136  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    ||||   | ||||||||||||||||||    
T  47462137 ttttgccagttgagctaggacttctag 47462163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 52772243 - 52772121
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| ||| |||||| | ||| ||| || |||| |||||||| |||||| | ||||||   |||| || |||||||||||| ||    
T  52772243 tagatagacgaaatgacaaagtcaatataaacttacacacacaagtgaaggtatcgggattcgaaccccgatcaaggcatccgacctaacaattttggca 52772144  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||||  ||||||| ||| ||||    
T  52772143 ttttaccaattgagttagaactt 52772121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 16461038 - 16460937
Alignment:
Q  80 ttataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattttgacattttattaattgagctaggacttct 179  Q
    ||||||| ||||| ||| || |||| || ||||||||||||| ||||||| || || || ||||||||||||| ||||| ||| || ||| || ||||||    
T  16461038 ttataaactcacacacacaagtgaaggtgtcggggttcgaacccgatcatgacgtccgacctaacaattttgatattttgttagttaagccagaacttct 16460939  T
Q  180 ag 181  Q
    ||    
T  16460938 ag 16460937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 36751904 - 36751941
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacataca 96  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36751904 atagacgaaatgagaaaatcattataaattcacataca 36751941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 43588884 - 43588799
Alignment:
Q  64 cgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcgatcataacatctgatctaacaattt 149  Q
    |||||||| ||| ||||| |||||||||| ||| || ||||  ||||||||||||||| ||||||| ||||| |  ||||||||||    
T  43588884 cgaaatgataaagtcattttaaattcacacacacaagtgaagatatcggggttcgaacccgatcatgacatccggcctaacaattt 43588799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 48860130 - 48860089
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacataca 96  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  48860130 atagatagacgaaatgacaaagtcattataaactcacataca 48860089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 24712215 - 24712091
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| || |||||||||| | ||    
T  24712215 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggca 24712116  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  24712115 ttttgccagttgagctaggacttct 24712091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 31633900 - 31633797
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| | |||||||| ||||| | | | ||||| || |||| ||||||||| ||||||| || |||  ||||||||||| | ||    
T  31633900 tagatagacgaaatgacaaatttattataaactcacacatacagatgaatgtgtcggagttcgaactccgatcatgacgtctagtctaacaatttcgcca 31633801  T
Q  155 tttt 158  Q
    ||||    
T  31633800 tttt 31633797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 34123451 - 34123412
Alignment:
Q  140 ctaacaattttgacattttattaattgagctaggacttct 179  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  34123451 ctaacaattttgacattttaccaattgagctaggacttct 34123412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 37166265 - 37166142
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| | ||    
T  37166265 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggca 37166166  T
Q  155 ttttattaattgagctaggacttc 178  Q
    ||||   | |||||||||||||||    
T  37166165 ttttgccagttgagctaggacttc 37166142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 31435919 - 31436041
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||| |||||||||| ||||||||| ||||| ||| || || | ||| ||||||||||| | | ||||| ||||| |  |||||||||| | ||    
T  31435919 tagatagacggaatgacaaaaccattataaactcacacacacaagtggaggtaccggggttcgaaccccaatcatgacatccggcctaacaatttcggca 31436018  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||||  | |||| |||||||||    
T  31436019 ttttaccagttgaactaggactt 31436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 51425454 - 51425412
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaa 98  Q
    |||||||||||||||||||| |||||||||| ||||| |||||    
T  51425454 tagatagacgaaatgacaaagtcattataaactcacacacaaa 51425412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 54907893 - 54908019
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgaca 154  Q
    |||||| |||||||| ||||  ||||||||| | ||| ||| ||||||| ||| |||||||| ||| ||||||||  |||| |  |||||||||| | ||    
T  54907893 tagatatacgaaatggcaaagccattataaacttacacacataaatgaatgtaccggggttcaaacctcgatcatggcatccggcctaacaatttcggca 54907992  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    ||||   | ||||||||||||||||||    
T  54907993 ttttgccagttgagctaggacttctag 54908019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 9749086 - 9749123
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  9749086 atagatagacgaaatgacaaaaccattataaactcaca 9749123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 25586328 - 25586393
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  25586328 tagatagacgaaatgacaaagccattataaactcacacacataagtggaggtaccggggttcgaac 25586393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 27009349 - 27009414
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||| | ||||||||||| |||||||||| ||||||||| || || |  |||||||||||||||    
T  27009349 tagataaatgaaatgacaaagtcattataaactcacatacataagtggagatatcggggttcgaac 27009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 31375240 - 31375175
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||| |||||||||| | ||| ||| || || | ||| ||||||||||||    
T  31375240 tagatagacgaaatgacaaagtcattataaacttacacacacaagtggaggtaccggggttcgaac 31375175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 32233739 - 32233678
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttc 117  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | ||| ||||||||    
T  32233739 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtaccggggttc 32233678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 39284576 - 39284641
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||||  |||||||| ||||| ||| || || | ||| ||||||||||||    
T  39284576 tagatagacgaaatgacaaaactattataaactcacacacacaagtggaggtaccggggttcgaac 39284641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 40996493 - 40996428
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||| ||||| ||||| ||||||||| ||||||||| ||||| | ||  ||||||||||||    
T  40996493 tagatagacaaaatggcaaaaccattataaactcacatacataaatggaggtgccggggttcgaac 40996428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 44619857 - 44619978
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca-tacaa-aaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttga 152  Q
    ||||||||||||||| ||||   ||||||||||||||  |||| ||||| | |||||||||||| ||| | | |||||||||| || ||||| |||| ||    
T  44619857 tagatagacgaaatggcaaagctattataaattcacacaacaacaaatggaggtatcggggttcaaaccctagtcataacatccgacctaactatttcga 44619956  T
Q  153 cattttattaattgagctagga 174  Q
    ||||||   |||||||||||||    
T  44619957 cattttgccaattgagctagga 44619978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 51491841 - 51491870
Alignment:
Q  129 taacatctgatctaacaattttgacatttt 158  Q
    ||||||||||||||||||||||||||||||    
T  51491841 taacatctgatctaacaattttgacatttt 51491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 7413219 - 7413183
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  7413219 tagatagacgaaatgacaaagtcattataaactcaca 7413183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 7459299 - 7459263
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  7459299 tagatagacgaaatgacaaagtcattataaactcaca 7459263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 12315931 - 12316055
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||| |||||| ||||  ||||||||| ||||| ||| || || | |||||||||||||||| | | ||||  ||||||  ||||| |||| ||||    
T  12315931 tagatagatgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaaccctggtcatggcatctggcctaactatttcgaca 12316030  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||| | | |||||||||| |||||    
T  12316031 ttttttcagttgagctagggcttct 12316055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 13389147 - 13389023
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| || ||||||||||   ||    
T  13389147 tagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcagca 13389048  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  13389047 ttttgccagttgagctaggacttct 13389023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 24550940 - 24550816
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| | ||    
T  24550940 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggca 24550841  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | |||||||| |||||||    
T  24550840 ttttgccagttgagctaagacttct 24550816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 28187233 - 28187289
Alignment:
Q  123 cgatcataacatctgatctaacaattttgacattttattaattgagctaggacttct 179  Q
    |||||||| |||| |  |||||||||| |||||||||| | ||||||||||||||||    
T  28187233 cgatcatagcatccggcctaacaatttcgacattttatcagttgagctaggacttct 28187289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 30044585 - 30044709
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | |||||||  |||| |  |||||||||| | ||    
T  30044585 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatggcatccggcctaacaatttcggca 30044684  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  30044685 ttttgccagttgagctaggacttct 30044709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 31263502 - 31263626
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  |||| | ||||| ||||| ||||    
T  31263502 tagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatggcatccggtctaataatttcgaca 31263601  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  31263602 ttttgccagttgagctaggacttct 31263626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 33416581 - 33416705
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| | |||||||||| | |||||| ||||| | ||||||||||| |  |    
T  33416581 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccctgatcatgacatccggtctaacaatttcggta 33416680  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  33416681 ttttgccagttgagctaggacttct 33416705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 48139977 - 48140013
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  48139977 tagatagacgatatgtcaaaatcattataaattcaca 48140013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 49882710 - 49882834
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| |||| ||||  |||| |  |||||||||| | ||    
T  49882710 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaacctcggtcatggcatccggcctaacaatttcggca 49882809  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  49882810 ttttgccagttgagctaggacttct 49882834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 53216136 - 53216037
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||||||| | |||||||||||||| ||| || || | || | |||||| |||||| |||||| |||| | | ||||||||||||| ||||    
T  53216136 atagacgaaatgacaaagtgattataaattcacacacataagtggaggtgttggggtt-gaactctgatcatgacatttaacctaacaattttgatattt 53216038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 43167266 - 43167140
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||| ||||||||| | ||| ||  || || | ||||||||||||||| | ||||||| |||||  | || ||||||| ||||    
T  43167266 tagatagacgaaatgacaaaaccattataaactgacacacgcaagtggaggtatcggggttcgaaccccgatcatgacatcaaaccttacaatttcgaca 43167167  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||||| | |||||||| |||||||||    
T  43167166 ttttatcagttgagctatgacttctag 43167140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 43105880 - 43105945
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||| ||||||||||| |||||||||| ||||| ||| |||||||||||| |||||||||||    
T  43105880 tagatagatgaaatgacaaagtcattataaactcacacacacaaatgaaagtattggggttcgaac 43105945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 37953911 - 37953788
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||||||||||||| ||||| | | || || | ||||||||||||||| | | |||||| |||| |  |||||||||| |||    
T  37953911 atagatagacgaaatggcaaaatcattataaactcacacatataagtggaggtatcggggttcgaaccacaatcatagcatccggcctaacaatttcgac 37953812  T
Q  154 attttattaattgagctaggactt 177  Q
    |||||   | ||||||||||||||    
T  37953811 atttttccagttgagctaggactt 37953788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 8971932 - 8971810
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac-tcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| |||| ||||| |||||||||| ||| || |||| ||| | || ||| ||| ||| |||||||||| |   ||||||||||||||    
T  8971932 tagatagacgaaatggcaaagtcattgtaaattcacacacacaagtgaaggtaccaggattcaaacctcggtcataacatccggcttaacaattttgaca 8971833  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||||| ||||||  ||||||||    
T  8971832 ttttatcaattgaattaggactt 8971810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 20993664 - 20993542
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||   |||||||| ||||| ||| || || | ||| |||||||||||| | ||||||| |||| |  |||||||||| ||||    
T  20993664 tagatagacgaaatggcaaagctattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcgaca 20993565  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||||  |||||||||||||||    
T  20993564 ttttatcgattgagctaggactt 20993542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 41897952 - 41897891
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggtt 116  Q
    ||||||||||||||||||||||| |||||||| ||||| ||| || || |||||||||||||    
T  41897952 atagatagacgaaatgacaaaattattataaactcacacacataagtggaagtatcggggtt 41897891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 7772055 - 7772175
Alignment:
Q  60 tagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacatttt 158  Q
    ||||||||||| |||| |||||||||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| | ||||||    
T  7772055 tagacgaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttcggcatttt 7772154  T
Q  159 attaattgagctaggacttct 179  Q
    |  | ||||||||||||||||    
T  7772155 accagttgagctaggacttct 7772175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 40744243 - 40744367
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| || || | |||   ||||||||||| || ||||  ||||||  |||||||||||||||    
T  40744243 tagatagacgaaatggcaaaaccattataaactcacacacacaagtggaggtactagggttcgaactccggtcatggcatctggcctaacaattttgaca 40744342  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  40744343 ttttgccagttgagctaggacttct 40744367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 41562571 - 41562445
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaa--tgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttga 152  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||| | |  || | ||| |||||||||||| | ||||||| |||| |  |||||||||| ||    
T  41562571 tagatagacgaaatggcaaaaccattataaactcacacacacacaagtggaggtaccggggttcgaaccccgatcatagcatccggcctaacaatttcga 41562472  T
Q  153 cattttattaattgagctaggacttct 179  Q
    |||||||  | ||||||||||||||||    
T  41562471 cattttaccagttgagctaggacttct 41562445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 44604825 - 44604944
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgacattt 157  Q
    ||||||||||||||||||  |||||||| ||||| ||| || || | ||| ||||||||||| | |||||||  |||| || |||||||||| | |||||    
T  44604825 atagacgaaatgacaaaactattataaactcacacacataagtggaggtaccggggttcgaaccccgatcatggcatccgacctaacaatttcggcattt 44604924  T
Q  158 tattaattgagctaggactt 177  Q
    |   ||||||||||||||||    
T  44604925 tgccaattgagctaggactt 44604944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 10096739 - 10096613
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||| | || ||||  |||| |  |||||||||| ||||    
T  10096739 tagatagacgaaatggcaaagccattataaactcacacacataagtggaggtatcggggttcgaaccccggtcatggcatccggcctaacaatttcgaca 10096640  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    ||||   | ||||||||||||||||||    
T  10096639 ttttgccagttgagctaggacttctag 10096613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 37817503 - 37817381
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||||||||||||||| | || ||||  |||| || |||||||||| | ||    
T  37817503 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccggtcatggcatccgacctaacaatttcgtca 37817404  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  37817403 ttttgccagttgagctaggactt 37817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 43294052 - 43294006
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatg 102  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  43294052 tagatagacgaaatgacaaaatcattataaaatcagatacataaatg 43294006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 11100292 - 11100413
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgacattt 157  Q
    |||||||||||||||||| |||||||||  |||| ||| || || | ||| ||||||||||||| |||||||  |||| |  |||||||||| | |||||    
T  11100292 atagacgaaatgacaaaaccattataaacccacacacacaagtggaggtaccggggttcgaactccgatcatggcatccggcctaacaatttcggcattt 11100391  T
Q  158 tattaattgagctaggacttct 179  Q
    |   | ||||||||||||||||    
T  11100392 ttccagttgagctaggacttct 11100413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 16395500 - 16395435
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| ||||| | ||| ||||||||||||    
T  16395500 tagatagacgaaatggcaaagtcattataaactcacacacacaaatggaggtaccggggttcgaac 16395435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 24241898 - 24241935
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  24241898 atagatagacgaaatgacaaagtcattataaattcaca 24241935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 10006270 - 10006170
Alignment:
Q  59 atagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacattt 157  Q
    ||||| ||||||  ||| |||||||||| ||||| ||| || |||| |||  ||||||||||| | |||||| ||||| | |||||||||||||||||||    
T  10006270 atagatgaaatggtaaagtcattataaactcacacacataagtgaaggtactggggttcgaaccccgatcatgacatccggtctaacaattttgacattt 10006171  T
Q  158 t 158  Q
    |    
T  10006170 t 10006170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 14188217 - 14188093
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || || | ||| |||||||||||| | | ||||  |||| |  |||||||||| ||||    
T  14188217 tagatagacgaaatggcaaagtcattataaactcacacacacaagtggaggtaccggggttcgaacccaggtcatggcatccggcctaacaatttcgaca 14188118  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  14188117 ttttgccagttgagctaggacttct 14188093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 14243826 - 14243702
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| ||||| | ||| ||||||||||| |||| |||| ||||     |||||||||| | ||    
T  14243826 tagatagacgaaatggcaaagccattataaactcacacacacaaatggaggtaccggggttcgaacctcggtcatgacattcagcctaacaatttcggca 14243727  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  14243726 ttttaccagttgagctaggacttct 14243702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 14725874 - 14725774
Alignment:
Q  78 cattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacattttattaattgagctaggact 176  Q
    ||||||||| ||||| ||| || || | ||||| |||||||||||| |||||| | |||||  |||| ||||| |||||||||| | |||||||||||||    
T  14725874 cattataaactcacacacacaagtggaggtatcagggttcgaactccgatcatgatatctggcctaataatttcgacattttatcagttgagctaggact 14725775  T
Q  177 t 177  Q
    |    
T  14725774 t 14725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 20150348 - 20150224
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||   |||||||| ||||| ||| || || | |||| |||||||||| | || |||| ||||| |  |||||||||||||||    
T  20150348 tagatagacgaaatgacaaagctattataaactcacacacacaagtggaggtattggggttcgaattccggtcatgacatccggcctaacaattttgaca 20150249  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||| ||||    
T  20150248 ttttgccagttgagctaggaattct 20150224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 23554997 - 23554873
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||| |||||||||||||||  || || || | ||| | |||| ||||| | |||||| ||||  ||||||||||||| | ||    
T  23554997 tagatagacgaaatggcaaaaccattataaattcacacgcacaagtggaggtaccagggtccgaaccctgatcatgacattcgatctaacaatttcggca 23554898  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||| ||||    
T  23554897 ttttaccagttgagctaggatttct 23554873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 24655101 - 24654977
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || |||| ||| |||||||||||| | | ||||  |||| |  |||||||||||| ||    
T  24655101 tagatagacgaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaaccccagtcatggcatccggcctaacaattttggca 24655002  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  24655001 ttttgccagttgagctaggacttct 24654977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 25199173 - 25199049
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcg-aactcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||| ||| || ||||| |||| |  |||||||||| | ||    
T  25199173 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaacccggtcatagcatccggcctaacaatttcggca 25199074  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  25199073 ttttaccagttgagctaggacttct 25199049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 26738098 - 26737974
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||  ||||||||||||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  26738098 tagatagacgaaatggtaaagccattataaattcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 26737999  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | ||||||||||||||||    
T  26737998 ttttaccagttgagctaggacttct 26737974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 2589414 - 2589321
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattt 149  Q
    ||||||||| ||||| ||||  ||||||||| ||||||||| || ||||| || ||||||||||||| || ||||  ||||||| ||||||||||    
T  2589414 tagatagac-aaatggcaaagccattataaactcacatacataagtgaaaataccggggttcgaactccggtcatggcatctgacctaacaattt 2589321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 5895796 - 5895918
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  ||| |||||||||| ||||| ||| || || | ||| ||||||||||| | |||||||| |||  |  |||||||||| ||||    
T  5895796 tagatagacgaaatggtaaagtcattataaactcacacacacaattggatgtaccggggttcgaaccccgatcatagcattcggcctaacaatttcgaca 5895895  T
Q  155 ttttattaattgagctaggactt 177  Q
    ||||   | ||||||||||||||    
T  5895896 ttttgccagttgagctaggactt 5895918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 5917409 - 5917363
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatg 102  Q
    |||||||||||||||||||| |||||||||| ||||| ||| |||||    
T  5917409 tagatagacgaaatgacaaagtcattataaactcacacacacaaatg 5917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 10926087 - 10926193
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| |||  ||||||||||||||| ||| ||||| | |||  ||| |||||| | || ||||| |||| || |||||||||| | ||    
T  10926087 tagatagacgaaatgataaagccattataaattcacacacataaatggaggtactgggattcgaatcccggtcatagcatccgacctaacaatttcggca 10926186  T
Q  155 ttttatt 161  Q
    |||||||    
T  10926187 ttttatt 10926193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 41278723 - 41278661
Alignment:
Q  61 agacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    |||||||||| ||||| ||||| ||| ||||| |||||| || | ||||||||||||||||||    
T  41278723 agacgaaatggcaaaaccattaaaaactcacacacaaaagtggaggtatcggggttcgaactc 41278661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 44225312 - 44225278
Alignment:
Q  58 gatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||||||||||| |||||    
T  44225312 gatagacgaaatgacaaaatcattataaactcaca 44225278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 2508134 - 2508259
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgac 153  Q
    ||||||||| |||||||||||   |||||||| ||||| ||| || |  | ||||||| |||||||| | | |||| ||||| |  |||||||||||| |    
T  2508134 atagatagatgaaatgacaaagctattataaactcacacacacaagtagaggtatcggagttcgaaccccggtcatgacatccgtcctaacaattttggc 2508233  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||| ||| ||||| ||||||||||    
T  2508234 attttgttagttgagttaggacttct 2508259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 14725429 - 14725388
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaa 97  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  14725429 tagatagacgaaatgacaaagtcattataaactcacacacaa 14725388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 19649499 - 19649564
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  19649499 tagatagacgaaatgacaaagccattataaactcacacacataagtggaggtaccggggttcgaac 19649564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 27928286 - 27928161
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  |||| | ||||||||||| | |    
T  27928286 atagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccggtctaacaatttcggc 27928187  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   | ||||||||||||||||    
T  27928186 attttgccagttgagctaggacttct 27928161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 34642438 - 34642483
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaat 101  Q
    |||||||||||||||||||| |||||||||| ||||| ||| ||||    
T  34642438 tagatagacgaaatgacaaagtcattataaactcacacacacaaat 34642483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 37295253 - 37295188
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||||||||  ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  37295253 tagatagacgaaatgacaaagccattataaactcacacacacaagtggaggtaccggggttcgaac 37295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 40772566 - 40772631
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || |||| ||| ||||||||||||    
T  40772566 tagatagacgaaatggcaaagccattataaactcacacacacaagtgaaggtaccggggttcgaac 40772631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 3673844 - 3673880
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3673844 tagatagacgaaatgacaaagtcattataaactcaca 3673880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 4430736 - 4430860
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  4430736 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 4430835  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  4430836 ttttgccagttgagctaggacttct 4430860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 6317427 - 6317303
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| |  |||||||||| | ||    
T  6317427 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccggcctaacaatttcggca 6317328  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  6317327 ttttgccagttgagctaggacttct 6317303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 13753705 - 13753745
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacataca 96  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  13753705 tagatagacgaaatgagaaaatcattataaacacacataca 13753745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 18040263 - 18040139
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||  |||  ||||||||| ||||| ||| || || | ||| ||||||||||| || | |||| ||||| |  ||||||||||   ||    
T  18040263 tagatagacgaaatggtaaagccattataaactcacacacacaagtggaggtaccggggttcgaatctgggtcatgacatccggcctaacaatttcagca 18040164  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||| | ||||||||||||||||    
T  18040163 ttttatcagttgagctaggacttct 18040139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 20662649 - 20662613
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  20662649 tagatagacgaaatgacaaagtcattataaactcaca 20662613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 24284088 - 24284056
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaatt 88  Q
    |||||||||||||||||||| ||||||||||||    
T  24284088 tagatagacgaaatgacaaagtcattataaatt 24284056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 27544917 - 27545041
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| |||||  || || || | ||| ||||||||||| | ||  ||||||||| || |||||||||| ||||    
T  27544917 tagatagacgaaatggcaaagccattataaactcacacgcacaagtggaggtaccggggttcgaaccccggacataacatccgacctaacaatttcgaca 27545016  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||| ||||||    
T  27545017 ttttgccagttgagctagaacttct 27545041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 34711556 - 34711680
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||  |||| || |||||||||| | ||    
T  34711556 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaatttcggca 34711655  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  34711656 ttttgccagttgagctaggacttct 34711680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 35058452 - 35058416
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  35058452 tagatagacgaaatgacaaagtcattataaactcaca 35058416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 36586609 - 36586485
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||  ||||||||| ||||| | | || || | ||| ||||||||||| | || ||||  |||| || |||||||||| | ||    
T  36586609 tagatagacgaaatgacaaagccattataaactcacacatacaagtggaggtaccggggttcgaaccccggtcatggcatccgacctaacaatttcggca 36586510  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  36586509 ttttgccagttgagctaggacttct 36586485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 42922666 - 42922542
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||   |||||||| ||||| ||| || || |  || ||||||||||| | ||||||  ||||| |||| |||||||| ||||    
T  42922666 tagatagacgaaatgacaaagcgattataaactcacacacataagtggagttaccggggttcgaaccccgatcacgacatccgatcaaacaatttcgaca 42922567  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | |||||||| |||||||    
T  42922566 ttttgccagttgagctaagacttct 42922542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 17546163 - 17546041
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||||||||| ||||||||| |||||   | || |  |  ||||||||||| ||||| |||||| ||||| || |||||||||| ||||    
T  17546163 tagatagacgaaatgacaaaaccattataaactcacacgtataagtagagatatcggggttcaaactccgatcatgacatccgacctaacaatttcgaca 17546064  T
Q  155 ttttattaattgagctaggactt 177  Q
    |||| | ||||||||||||||||    
T  17546063 ttttgtcaattgagctaggactt 17546041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 24571618 - 24571744
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||||||| |||||||||| | ||| ||| || || | | | |||||||||||| | | |||| |||||||  |||||||||| ||||    
T  24571618 tagatagacgaaatgacaaagtcattataaacttacacacacaagtggagggaacggggttcgaaccctggtcatgacatctggcctaacaatttcgaca 24571717  T
Q  155 ttttattaattgagctaggacttctag 181  Q
    |||| | | ||||||||||||||||||    
T  24571718 ttttttcagttgagctaggacttctag 24571744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 31062948 - 31063071
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    |||||||||||||||| ||| |||||||||| ||||||||| || ||| | |||||||||||||| | | |||||| |||| |  |||||||||| | ||    
T  31062948 tagatagacgaaatgataaagtcattataaactcacatacacaattgaga-tatcggggttcgaatcccaatcatagcatccggcctaacaatttcggca 31063046  T
Q  155 ttttattaattgagctaggacttct 179  Q
     ||||||| ||||| ||||||||||    
T  31063047 ctttattagttgaggtaggacttct 31063071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 7974708 - 7974769
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttc 117  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| || |||| ||||||||||||    
T  7974708 tagatagacgaaatgacaaaaccattataaactcacacacacaactgaaggtatcggggttc 7974769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 8977283 - 8977179
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||| ||||||||| ||||| ||| ||||| | ||| ||||||||||| | ||||||| ||||| |  |||||||||| | |    
T  8977283 atagatagacgaaatggcaaaaccattataaactcacacacacaaatggaggtaccggggttcgaaccccgatcatgacatccggcctaacaatttgggc 8977184  T
Q  154 atttt 158  Q
    |||||    
T  8977183 atttt 8977179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 2395557 - 2395623
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||||  ||||||||| ||||||||| |||||||  |||| || |||||||    
T  2395557 atagatagacgaaatgacaaagccattataaactcacatacataaatgaagatatcaggattcgaac 2395623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 31057960 - 31057894
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||||| ||||||||| ||||| ||| || || | ||| ||||||||||||    
T  31057960 atagatagacgaaatgacaaaaccattataaactcacacacacaagtggaggtaccggggttcgaac 31057894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 6266760 - 6266656
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaact-cgatcataacatctgatctaacaattttgac 153  Q
    ||||||||| |||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||||| || |||| ||||| | ||||||||||| |||    
T  6266760 atagatagatgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaactccggtcatgacatccggtctaacaatttcgac 6266661  T
Q  154 atttt 158  Q
    |||||    
T  6266660 atttt 6266656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 8939753 - 8939629
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || |||| ||||| || |||||||||| | ||    
T  8939753 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttcggca 8939654  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  8939653 ttttgccagttgagctaggacttct 8939629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 12473774 - 12473738
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12473774 tagatagacgaaatgacaaaatcattataaactcaca 12473738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 12795020 - 12795144
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| || ||||||||| | | |||| ||||| |  |||||||||| | ||    
T  12795020 tagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccgcggttcgaaccccggtcatgacatccggcctaacaatttcggca 12795119  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||| || ||||||||||||||||    
T  12795120 ttttactagttgagctaggacttct 12795144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 32107836 - 32107960
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || ||||| ||||||||||| | ||||||| |||||    |||||||||| | ||    
T  32107836 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaagtaccggggttcgaaccccgatcatgacatccagcctaacaatttcggca 32107935  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  32107936 ttttgccagttgagctaggacttct 32107960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 2236362 - 2236325
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  2236362 atagatagacgaaatggcaaaatcattataaactcaca 2236325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 5603448 - 5603513
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    ||||||||||||||| |||| |||||||||| ||||| ||| || || | ||||| ||||||||||    
T  5603448 tagatagacgaaatggcaaagtcattataaactcacacacacaagtggaggtatcagggttcgaac 5603513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 9727622 - 9727557
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaac 121  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | |||  |||||||||||    
T  9727622 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtacaggggttcgaac 9727557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 22721381 - 22721344
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  22721381 atagatagacgaaatgacaaagtcattataaactcaca 22721344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 34830904 - 34830783
Alignment:
Q  57 agatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc-gatcataacatctgatctaacaattttgacat 155  Q
    ||||||||| || ||||||||||||||||| ||| | ||| || |  | ||| |||| ||||||||| | ||||  |||| || |||||||||| | |||    
T  34830904 agatagacggaaagacaaaatcattataaactcatacacacaagtagaggtaccgggcttcgaactccggtcatggcatccgacctaacaatttcggcat 34830805  T
Q  156 tttattaattgagctaggactt 177  Q
    ||||| | ||||||||||||||    
T  34830804 tttatcagttgagctaggactt 34830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 343148 - 343184
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||| |||| |||||||||||||||    
T  343148 tagatagacgaaatgaaaaaaccattataaattcaca 343184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 8487554 - 8487678
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||  |||| |||||||||| ||||| ||| || || | ||| ||||||||||| |||||| ||| |||  |  |||||||||| | ||    
T  8487554 tagatagacgaaatagcaaagtcattataaactcacacacataagtggaggtaccggggttcgaatctcgataatagcattcggcctaacaatttcggca 8487653  T
Q  155 ttttattaattgagctaggacttct 179  Q
    |||||  | |||||||| |||||||    
T  8487654 ttttaccagttgagctaagacttct 8487678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 10181172 - 10181048
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| | ||||||||| | ||||||  ||||| || |||||||||| | ||    
T  10181172 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccagggttcgaaccccgatcacgacatccgacctaacaatttcggca 10181073  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  10181072 ttttgccagttgagctaggacttct 10181048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 14465826 - 14465862
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    |||||||||||||||||||| |||||||||| |||||    
T  14465826 tagatagacgaaatgacaaagtcattataaactcaca 14465862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 23383057 - 23383181
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||| ||| | || || | ||| ||||||||||| | |||| || |||||||| ||||||||||   ||    
T  23383057 tagatagacgaaatggcaaagccattataaactcatatatacaagtggaggtaccggggttcgaaccccgattatgacatctgacctaacaatttcagca 23383156  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||  || |||| |||||||||||    
T  23383157 ttttgctagttgaactaggacttct 23383181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 7757 - 7882
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||||||||||||||| | || |||| ||||| ||||||||||||| | |    
T  7757 atagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtatcggggttcgaaccccggtcatgacatccgatctaacaatttcggc 7856  T
Q  154 attttattaattgagctaggacttct 179  Q
    |||||   |||||||||| |||||||    
T  7857 attttgccaattgagctaagacttct 7882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 3795 - 3918
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacataca-aaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||| ||| |||| |||||| | ||||||| || ||  | |||||||||| | |    
T  3795 tagatagacgaaatgacaaaaccattataaactcacacacataaaatgaaggtaccgggattcgaaccccgatcatgacgtccaacctaacaatttcggc 3894  T
Q  154 attttattaattgagctaggactt 177  Q
    ||||||  | ||||||||||||||    
T  3895 attttaccagttgagctaggactt 3918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 1185 - 1083
Alignment:
Q  58 gatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactcga-tcataacatctgatctaacaattttgacatt 156  Q
    ||||||||||||| |||| |||||||||| ||||| ||| | ||||| |||| |||||| |||| | | |||||||||| || |||||||||| | ||||    
T  1185 gatagacgaaatggcaaagtcattataaactcacacacacacatgaaggtattggggttggaaccccagtcataacatccgacctaacaatttcggcatt 1086  T
Q  157 tta 159  Q
    |||    
T  1085 tta 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 161963 - 161922
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacataca 96  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  161963 atagatagacgaaatgacaaaattattataacttcacataca 161922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 90696 - 90572
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgaca 154  Q
    ||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | ||||||| ||||| |  |||||||||| | ||    
T  90696 tagatagacgaaatggcaaagccattataaactcacacacacaagtggaggtaccggggttcgaaccccgatcatgacatcaggcctaacaatttcggca 90597  T
Q  155 ttttattaattgagctaggacttct 179  Q
    ||||   | ||||||||||||||||    
T  90596 ttttgccagttgagctaggacttct 90572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 64410 - 64343
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaactc 123  Q
    |||||||||||||||||||| |||||||||| ||||| ||| || || | |||  |||||||||||||    
T  64410 tagatagacgaaatgacaaagtcattataaactcacacacacaagtggaggtactggggttcgaactc 64343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 2606 - 2481
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||| |||| |  |||||||||| |||    
T  2606 atagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcgac 2507  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||| | | ||||| || |||||||    
T  2506 attttgtcagttgagttatgacttct 2481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 2606 - 2481
Alignment:
Q  55 atagatagacgaaatgacaaaatcattataaattcacatacaaaaatgaaagtatcggggttcgaa-ctcgatcataacatctgatctaacaattttgac 153  Q
    |||||||||||||||| ||||  ||||||||| ||||| ||| || || | ||| ||||||||||| | || ||||| |||| |  |||||||||| |||    
T  2606 atagatagacgaaatggcaaagccattataaactcacacacataagtggaggtaccggggttcgaaccccggtcatagcatccggcctaacaatttcgac 2507  T
Q  154 attttattaattgagctaggacttct 179  Q
    ||||| | | ||||| || |||||||    
T  2506 attttgtcagttgagttatgacttct 2481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 6647 - 6619
Alignment:
Q  130 aacatctgatctaacaattttgacatttt 158  Q
    |||||||||||||||||||||||||||||    
T  6647 aacatctgatctaacaattttgacatttt 6619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 15613 - 15649
Alignment:
Q  56 tagatagacgaaatgacaaaatcattataaattcaca 92  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  15613 tagatagacgaaatgacaaaaccattataaactcaca 15649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University