View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14142_low_30 (Length: 323)

Name: NF14142_low_30
Description: NF14142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14142_low_30
NF14142_low_30
[»] chr8 (36 HSPs)
chr8 (52-236)||(34741551-34741735)
chr8 (167-232)||(5573398-5573463)
chr8 (168-226)||(7489720-7489778)
chr8 (167-236)||(6818125-6818194)
chr8 (167-236)||(14961664-14961733)
chr8 (165-225)||(28866930-28866990)
chr8 (167-234)||(27874682-27874749)
chr8 (167-234)||(28014859-28014926)
chr8 (162-233)||(2161498-2161569)
chr8 (167-234)||(22838335-22838402)
chr8 (167-209)||(8284569-8284611)
chr8 (167-233)||(12132094-12132160)
chr8 (167-233)||(26363991-26364057)
chr8 (181-234)||(297205-297258)
chr8 (164-209)||(13327939-13327984)
chr8 (167-212)||(13496710-13496755)
chr8 (167-212)||(38212945-38212990)
chr8 (167-212)||(45006101-45006146)
chr8 (167-234)||(12189589-12189656)
chr8 (167-234)||(12434017-12434084)
chr8 (167-221)||(3306056-3306110)
chr8 (167-225)||(7977997-7978055)
chr8 (167-209)||(10129238-10129280)
chr8 (161-211)||(12958633-12958683)
chr8 (167-209)||(18567417-18567459)
chr8 (167-209)||(31263034-31263076)
chr8 (167-217)||(32089467-32089517)
chr8 (169-225)||(23840375-23840432)
chr8 (181-234)||(24993449-24993502)
chr8 (167-236)||(26682176-26682245)
chr8 (167-236)||(31812221-31812290)
chr8 (164-212)||(14391575-14391623)
chr8 (167-231)||(16445737-16445801)
chr8 (166-210)||(34107170-34107214)
chr8 (173-225)||(36967077-36967129)
chr8 (167-207)||(40225988-40226028)
[»] chr3 (25 HSPs)
chr3 (161-234)||(8165756-8165829)
chr3 (164-234)||(42180162-42180232)
chr3 (167-234)||(1569191-1569258)
chr3 (167-236)||(3861504-3861571)
chr3 (169-234)||(23803049-23803114)
chr3 (161-236)||(40497155-40497230)
chr3 (167-230)||(50204517-50204580)
chr3 (167-233)||(2571379-2571445)
chr3 (167-233)||(10307877-10307943)
chr3 (164-234)||(54527704-54527774)
chr3 (167-212)||(40930183-40930228)
chr3 (161-210)||(46845138-46845187)
chr3 (164-235)||(37055364-37055435)
chr3 (167-234)||(51401550-51401617)
chr3 (167-234)||(51618157-51618224)
chr3 (167-209)||(3863464-3863506)
chr3 (167-209)||(23523081-23523123)
chr3 (167-209)||(38389582-38389624)
chr3 (167-212)||(15269161-15269206)
chr3 (162-235)||(29686429-29686502)
chr3 (192-220)||(7220265-7220293)
chr3 (167-235)||(20938166-20938234)
chr3 (167-223)||(25633119-25633175)
chr3 (167-207)||(33474474-33474514)
chr3 (192-236)||(33885552-33885596)
[»] chr7 (31 HSPs)
chr7 (167-234)||(25709400-25709467)
chr7 (161-233)||(33343099-33343171)
chr7 (167-234)||(4969883-4969950)
chr7 (167-233)||(29692541-29692607)
chr7 (160-233)||(34270372-34270445)
chr7 (161-213)||(820536-820588)
chr7 (169-221)||(24462958-24463010)
chr7 (165-233)||(44473511-44473579)
chr7 (167-234)||(29398135-29398202)
chr7 (162-221)||(33072104-33072163)
chr7 (167-234)||(45501569-45501636)
chr7 (162-236)||(5833463-5833537)
chr7 (168-234)||(26037203-26037269)
chr7 (162-212)||(39757106-39757156)
chr7 (167-233)||(46290121-46290187)
chr7 (168-221)||(18102232-18102285)
chr7 (167-232)||(46569814-46569878)
chr7 (162-209)||(3561874-3561921)
chr7 (167-234)||(7899487-7899554)
chr7 (167-221)||(8091313-8091367)
chr7 (167-209)||(9332096-9332138)
chr7 (167-209)||(22334022-22334064)
chr7 (167-209)||(48445199-48445241)
chr7 (168-225)||(2443906-2443963)
chr7 (167-236)||(7170110-7170179)
chr7 (168-209)||(42750418-42750459)
chr7 (167-235)||(7040253-7040321)
chr7 (167-235)||(19889449-19889517)
chr7 (167-211)||(26050462-26050506)
chr7 (167-211)||(26059821-26059865)
chr7 (168-232)||(28323247-28323311)
[»] chr1 (30 HSPs)
chr1 (167-236)||(41676561-41676630)
chr1 (167-236)||(25465266-25465335)
chr1 (164-212)||(5875213-5875261)
chr1 (168-236)||(32543052-32543120)
chr1 (167-234)||(6180296-6180363)
chr1 (167-234)||(36490889-36490956)
chr1 (161-211)||(34802100-34802150)
chr1 (167-233)||(35512836-35512902)
chr1 (167-212)||(3611883-3611928)
chr1 (166-231)||(32201737-32201802)
chr1 (167-232)||(43317575-43317640)
chr1 (161-209)||(313884-313932)
chr1 (167-235)||(6307611-6307679)
chr1 (167-234)||(13321986-13322053)
chr1 (167-234)||(22167445-22167512)
chr1 (167-234)||(23591808-23591875)
chr1 (167-210)||(25532343-25532386)
chr1 (167-214)||(51382444-51382491)
chr1 (167-221)||(1502721-1502775)
chr1 (167-209)||(6569986-6570028)
chr1 (167-221)||(23576415-23576469)
chr1 (167-209)||(30172014-30172056)
chr1 (167-209)||(30187555-30187597)
chr1 (162-212)||(38812872-38812922)
chr1 (167-225)||(39310787-39310845)
chr1 (192-234)||(47355404-47355446)
chr1 (167-236)||(6754579-6754648)
chr1 (167-220)||(35438839-35438892)
chr1 (167-235)||(9516690-9516758)
chr1 (167-219)||(11013395-11013447)
[»] chr6 (20 HSPs)
chr6 (162-234)||(34692464-34692536)
chr6 (167-207)||(8467790-8467830)
chr6 (162-233)||(14228122-14228193)
chr6 (162-216)||(2830677-2830731)
chr6 (162-236)||(17596449-17596523)
chr6 (167-233)||(28943770-28943836)
chr6 (167-212)||(13391807-13391852)
chr6 (167-212)||(29863303-29863348)
chr6 (162-235)||(31069578-31069651)
chr6 (162-235)||(31503851-31503924)
chr6 (192-232)||(30738123-30738163)
chr6 (167-234)||(3261188-3261255)
chr6 (161-236)||(8977461-8977536)
chr6 (167-209)||(10887164-10887206)
chr6 (167-233)||(17552588-17552654)
chr6 (167-213)||(24979150-24979196)
chr6 (164-209)||(6016991-6017036)
chr6 (170-210)||(20979106-20979146)
chr6 (167-211)||(27819628-27819672)
chr6 (167-211)||(31790917-31790961)
[»] chr5 (19 HSPs)
chr5 (167-234)||(3398330-3398397)
chr5 (167-235)||(31365951-31366019)
chr5 (167-235)||(32019985-32020053)
chr5 (167-234)||(23995417-23995484)
chr5 (167-225)||(15240951-15241009)
chr5 (167-233)||(30839892-30839958)
chr5 (167-233)||(36597690-36597756)
chr5 (162-235)||(2795632-2795705)
chr5 (161-214)||(29855892-29855945)
chr5 (168-221)||(30893752-30893805)
chr5 (167-235)||(12641994-12642062)
chr5 (192-236)||(25395344-25395388)
chr5 (162-209)||(14466490-14466537)
chr5 (167-234)||(14695114-14695181)
chr5 (167-209)||(4047547-4047589)
chr5 (167-233)||(6863667-6863733)
chr5 (167-236)||(8103581-8103650)
chr5 (167-236)||(41350310-41350379)
chr5 (164-212)||(34578143-34578191)
[»] chr4 (35 HSPs)
chr4 (167-234)||(18882268-18882335)
chr4 (166-225)||(55813983-55814042)
chr4 (162-216)||(16667380-16667434)
chr4 (167-233)||(50352413-50352479)
chr4 (161-234)||(19450895-19450968)
chr4 (165-234)||(52391408-52391477)
chr4 (167-236)||(53376409-53376478)
chr4 (162-234)||(17409934-17410006)
chr4 (169-234)||(24684947-24685012)
chr4 (167-236)||(49181180-49181249)
chr4 (167-235)||(29190817-29190885)
chr4 (162-234)||(34941388-34941460)
chr4 (168-236)||(42479894-42479962)
chr4 (167-234)||(19468304-19468371)
chr4 (167-234)||(23545586-23545653)
chr4 (173-232)||(30192383-30192442)
chr4 (162-209)||(35999943-35999990)
chr4 (167-209)||(27362526-27362568)
chr4 (167-233)||(39876941-39877007)
chr4 (167-233)||(44916644-44916710)
chr4 (167-209)||(47326893-47326935)
chr4 (167-209)||(47341689-47341731)
chr4 (167-209)||(48910803-48910845)
chr4 (161-235)||(49228763-49228837)
chr4 (167-209)||(54495638-54495680)
chr4 (183-236)||(2096979-2097032)
chr4 (167-212)||(3085802-3085847)
chr4 (165-206)||(9971659-9971700)
chr4 (164-209)||(23553705-23553750)
chr4 (167-232)||(25843406-25843471)
chr4 (167-232)||(40049670-40049735)
chr4 (167-207)||(4779437-4779477)
chr4 (167-235)||(7349797-7349865)
chr4 (161-221)||(9759137-9759197)
chr4 (162-234)||(51691451-51691523)
[»] scaffold0111 (2 HSPs)
scaffold0111 (167-225)||(41101-41159)
scaffold0111 (167-236)||(37115-37184)
[»] chr2 (28 HSPs)
chr2 (166-236)||(6765108-6765178)
chr2 (167-235)||(20566018-20566086)
chr2 (167-234)||(9747427-9747494)
chr2 (167-225)||(9895131-9895189)
chr2 (167-212)||(8065255-8065300)
chr2 (168-225)||(26003348-26003405)
chr2 (168-235)||(19228534-19228601)
chr2 (167-234)||(24729578-24729645)
chr2 (167-234)||(29157830-29157897)
chr2 (191-234)||(36612756-36612799)
chr2 (191-234)||(36620607-36620650)
chr2 (167-233)||(5583559-5583625)
chr2 (167-209)||(6109524-6109566)
chr2 (167-233)||(7757787-7757853)
chr2 (168-222)||(15411624-15411678)
chr2 (167-209)||(16126560-16126602)
chr2 (167-233)||(38248421-38248487)
chr2 (168-209)||(14377559-14377600)
chr2 (164-209)||(16123413-16123458)
chr2 (167-236)||(23932673-23932742)
chr2 (192-225)||(39607434-39607467)
chr2 (167-236)||(43388482-43388551)
chr2 (167-236)||(45062306-45062375)
chr2 (167-207)||(5853464-5853504)
chr2 (167-235)||(9450366-9450434)
chr2 (167-207)||(16493533-16493573)
chr2 (167-235)||(27665045-27665113)
chr2 (167-235)||(36731289-36731357)
[»] scaffold0061 (1 HSPs)
scaffold0061 (162-235)||(52775-52848)
[»] scaffold0017 (1 HSPs)
scaffold0017 (162-235)||(145786-145859)
[»] scaffold0011 (1 HSPs)
scaffold0011 (167-212)||(13217-13262)
[»] scaffold0073 (1 HSPs)
scaffold0073 (167-235)||(16536-16604)
[»] scaffold0018 (1 HSPs)
scaffold0018 (167-209)||(182177-182219)
[»] scaffold0727 (1 HSPs)
scaffold0727 (164-209)||(5826-5871)
[»] scaffold0192 (1 HSPs)
scaffold0192 (167-235)||(13564-13632)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 52 - 236
Target Start/End: Original strand, 34741551 - 34741735
Alignment:
Q  52 attaccatgtagacaaagacatgaaagggagaatgatataactatatttcgttacagttaataattaatagtaggttaagggtgcaaatatattgattat 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34741551 attaccatgtagacaaagacatgaaagggagaatgatataactatatttcgttacagttaataattaatagtaggttaagggtgcaaatatattgattat 34741650  T
Q  152 ccaagaagcaatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    || |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34741651 ccgagaagcaatgaatttttctatcatatgtaaatttgttcatgttaaaaagtttaaaataataagtttgtattagaacttgtgc 34741735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 5573463 - 5573398
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  5573463 tttttctatcatgtgcaaatttgtacatgttaagaagtttaaaataatacttttgcattagaactt 5573398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 7489778 - 7489720
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatta 226  Q
    ||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||    
T  7489778 ttttctatcatgtgcaaatttgtgcatgtttagaattttaaaataataagtttgtatta 7489720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 6818194 - 6818125
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||  ||||||  ||||||||||    
T  6818194 tttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgc 6818125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 14961664 - 14961733
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  14961664 tttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgc 14961733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 28866930 - 28866990
Alignment:
Q  165 gatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||||||||||| |||||||||||  || |||||||||||||||||||| |||||||||    
T  28866930 gatttttctatcatgtgcaaatttgtatatattaagaagtttaaaataatatgtttgtatt 28866990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 27874682 - 27874749
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  27874682 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgt 27874749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 28014859 - 28014926
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  28014859 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 28014926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 2161569 - 2161498
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||| |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  2161569 atgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 2161498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 22838402 - 22838335
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||| || |||  |||| |||||||    
T  22838402 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaataaaaactttacattaaaacttgt 22838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 8284569 - 8284611
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  8284569 tttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 8284611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 12132160 - 12132094
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| |||||| |||  ||||||||||| |||||| || |||||||||||| |||||||    
T  12132160 tttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttg 12132094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 26363991 - 26364057
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  26363991 tttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttg 26364057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 297258 - 297205
Alignment:
Q  181 gcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||  |||||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgt 297205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 13327939 - 13327984
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  13327939 ggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 13327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 13496710 - 13496755
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  13496710 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 13496755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 38212945 - 38212990
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  38212945 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 38212990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 45006146 - 45006101
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||    
T  45006146 tttttctatcataagcaaatttgcacatgttaagaagtttaaaata 45006101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 12189589 - 12189656
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||| ||||||||||||||||  || ||| |||| ||||||||    
T  12189589 tttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgt 12189656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 12434017 - 12434084
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||| ||||||||||||||||  || ||| |||| ||||||||    
T  12434017 tttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgt 12434084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 3306056 - 3306110
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| ||||    
T  3306056 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 3306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 7978055 - 7977997
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||||||||||||||||||||   ||||||| |||||||||||  ||| ||||||||    
T  7978055 tttttctatcatatgcaaatttgcaaatgttaaaaagtttaaaatggtaattttgtatt 7977997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 10129280 - 10129238
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  10129280 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 10129238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 12958683 - 12958633
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaat 211  Q
    ||||| |||||||||||| ||||||||||| ||| |||||||| |||||||    
T  12958683 aatgggtttttctatcatgtgcaaatttgtacatattaagaagcttaaaat 12958633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 18567417 - 18567459
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  18567417 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18567459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 31263076 - 31263034
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  31263076 tttttctatcatatgcaaatttgcacatgttaagtagtttaaa 31263034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 32089467 - 32089517
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataag 217  Q
    ||||||||| |||||||||||||  ||||||||| ||||||||||| ||||    
T  32089467 tttttctattatatgcaaatttgcacatgttaagcagtttaaaatagtaag 32089517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 23840432 - 23840375
Alignment:
Q  169 tttctatcatatgcaaatttgttcatgttaagaagttt-aaaataataagtttgtatt 225  Q
    |||| ||||||||||||||||  ||| ||||||||||| |||||||||| ||||||||    
T  23840432 tttccatcatatgcaaatttgcacatattaagaagtttaaaaataataaatttgtatt 23840375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 24993502 - 24993449
Alignment:
Q  181 gcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||  ||||||||||| |||||||||| || |||||||||||| ||||    
T  24993502 gcaaatttgcacatgttaagaaatttaaaataaaaattttgtattagaatttgt 24993449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 26682245 - 26682176
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  ||||||||||| |||||| || ||| ||||  || ||||||||||    
T  26682245 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgc 26682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 31812290 - 31812221
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||  ||| ||||  || ||||||||||    
T  31812290 tttttctatcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgc 31812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 14391575 - 14391623
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| || | ||||||||  |||||||||||||||||||||    
T  14391575 ggatttttctatgatgtccaaatttgcacatgttaagaagtttaaaata 14391623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 16445737 - 16445801
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaact 231  Q
    ||||||||| || ||||||||||  ||| |||||||||||||||||  || |||||||| |||||    
T  16445737 tttttctattatgtgcaaatttgcacatattaagaagtttaaaatagaaattttgtattggaact 16445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 34107170 - 34107214
Alignment:
Q  166 atttttctatcatatgcaaatttgttcatgttaagaagtttaaaa 210  Q
    |||||||||||||||||||||||    ||||||||||||||||||    
T  34107170 atttttctatcatatgcaaatttacatatgttaagaagtttaaaa 34107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 36967077 - 36967129
Alignment:
Q  173 tatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||| ||||||||||  |||||||||||||||||||||  || ||||||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtatt 36967129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 40225988 - 40226028
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagttta 207  Q
    |||||||||||| ||||||||||  ||||||||||||||||    
T  40225988 tttttctatcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 8165829 - 8165756
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  8165829 aatggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaacttgt 8165756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 42180232 - 42180162
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||||||||| || |||||||  |||||||||||||||||||||| || |||||||| ||||||||    
T  42180232 ggatttttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgt 42180162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 1569191 - 1569258
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| |  ||||| || ||||||||||||||||||||||||| |||||||| ||||||||    
T  1569191 tttttctatcatgtataaattcgtacatgttaagaagtttaaaataataactttgtattggaacttgt 1569258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 3861571 - 3861504
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||||  |||||| |||||||||||||    
T  3861571 ttttcctatcatatgtaaatttgtatatgttaagaagtttaaaataat--gtttgttttagaacttgtgc 3861504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 23803049 - 23803114
Alignment:
Q  169 tttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||||||||||||  |||||||||||||||||||||  || |||| ||| ||||||||    
T  23803049 tttctatcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgt 23803114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 40497230 - 40497155
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||||||||| ||||||||||  |||| ||||||||||||| || ||| |||   |||||||||||||    
T  40497230 aatggatttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgc 40497155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 50204580 - 50204517
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaac 230  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||    
T  50204580 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaac 50204517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 2571445 - 2571379
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  2571445 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 2571379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 10307943 - 10307877
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  10307943 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttg 10307877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 54527704 - 54527774
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| || ||||||||||  ||||||||||| |||||||||  || |||||||| ||||||||    
T  54527704 ggatttttctattatgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgt 54527774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 40930228 - 40930183
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  40930228 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 40930183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 46845138 - 46845187
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaa 210  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| ||||    
T  46845138 aatgaatttttctatcatgtgcaaatttgtacatgttaagaagttcaaaa 46845187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 37055364 - 37055435
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||||||||||||| || |||||||  ||| ||||||||||||||||| |||  ||||||  |||||||||    
T  37055364 ggatttttctatcatgtgaaaatttgcacatattaagaagtttaaaatagtaaagttgtatcggaacttgtg 37055435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 51401617 - 51401550
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||| || | ||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  51401617 tttttctattatgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 51401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 51618224 - 51618157
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  ||||||||||||||| ||||  ||| |||| ||| ||||||||    
T  51618224 tttttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgt 51618157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 3863506 - 3863464
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  3863506 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3863464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 23523123 - 23523081
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  23523123 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 23523081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 38389624 - 38389582
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  38389624 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 38389582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 15269161 - 15269206
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    ||||||||||||||| |||||||  |||||||||||||||| ||||    
T  15269161 tttttctatcatatgtaaatttgcacatgttaagaagtttataata 15269206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 29686502 - 29686429
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||| |||||||||||| ||||||||||  |||| ||||||||||||| || ||| |||   ||||||||||||    
T  29686502 atgggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtg 29686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 7220293 - 7220265
Alignment:
Q  192 catgttaagaagtttaaaataataagttt 220  Q
    |||||||||||||||||||||||||||||    
T  7220293 catgttaagaagtttaaaataataagttt 7220265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 20938234 - 20938166
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||||||  |||| ||||||||||||| || ||| ||||  || |||||||||    
T  20938234 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 20938166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 25633175 - 25633119
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgta 223  Q
    |||||||||||| ||||||||||  | |||||||||||| |||||| ||| ||||||    
T  25633175 tttttctatcatgtgcaaatttgaacttgttaagaagttcaaaatagtaaatttgta 25633119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 33474474 - 33474514
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagttta 207  Q
    |||||||||||| ||||||||||  ||||||||||||||||    
T  33474474 tttttctatcatgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 33885552 - 33885596
Alignment:
Q  192 catgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||| || |||||||||||| ||| |||||||||||||||||||    
T  33885552 catgtaaaaaagtttaaaatagtaaatttgtattagaacttgtgc 33885596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 25709400 - 25709467
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||| ||| |||||||| ||||||||    
T  25709400 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgt 25709467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 33343171 - 33343099
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    ||||| |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||||||| |||||||    
T  33343171 aatgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttg 33343099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 4969950 - 4969883
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  4969950 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 4969883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 29692541 - 29692607
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||  || || |||||| ||||||    
T  29692541 tttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagaaatttggtattaaaacttg 29692607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 34270445 - 34270372
Alignment:
Q  160 caatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||| |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  34270445 caatgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 34270372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 820536 - 820588
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataa 213  Q
    ||||| |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  820536 aatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaataa 820588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 24462958 - 24463010
Alignment:
Q  169 tttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||| ||||    
T  24462958 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactttg 24463010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 44473511 - 44473579
Alignment:
Q  165 gatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||||  || |||||||| |||||||    
T  44473511 gatttttttatcatgtgcaaatttgaacatgttaagaagtttaaaatagaaattttgtatttgaacttg 44473579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 29398135 - 29398202
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| | ||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  29398135 tttttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 29398202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 33072163 - 33072104
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    |||| |||||||||||| ||||||||||| ||||||||||| ||||||||| ||| ||||    
T  33072163 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttg 33072104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 45501636 - 45501569
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  ||| |||||||||||||||||  || |||||||| ||||||||    
T  45501636 tttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgt 45501569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 5833537 - 5833463
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||||||||||||||| ||||||||||  |||||||| |||||||||  | ||| || || |||||||||||||    
T  5833537 atggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgc 5833463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 26037269 - 26037203
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||  || |||||||| ||||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgt 26037203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 39757106 - 39757156
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||| |||||||||||| ||||||||||  |||||||||||||||||||||    
T  39757106 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 39757156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 46290187 - 46290121
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  46290187 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 46290121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 18102232 - 18102285
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    ||||||||||| ||||||||||  |||||||||||||||||| |||||| ||||    
T  18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaattaataactttg 18102285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 46569878 - 46569814
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    |||||||||||||| ||||||| |||||||| ||||||| ||||| |||||||| |||| ||||||    
T  46569878 tttttctatcatatacaaattttttcatgtt-agaagttcaaaatcataagtttttatttgaactt 46569814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 3561874 - 3561921
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  3561874 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 7899487 - 7899554
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||| || ||||||||  ||||||||| ||| |||||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgt 7899554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 8091313 - 8091367
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    |||||||||||| |||||||||   ||||||||||||||||||||| ||| ||||    
T  8091313 tttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttg 8091367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 9332138 - 9332096
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  9332138 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 9332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 22334022 - 22334064
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||    
T  22334022 tttttcaatcatgtgcaaatttgtacatgttaagaagtttaaa 22334064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 48445241 - 48445199
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||||||||||||| ||||| |||| |||||||||    
T  48445241 tttttctatcatatgcaaatttattcatattaaaaagtttaaa 48445199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 2443906 - 2443963
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    ||||||||||||| |||||||   |||||||||||||||||||||  || ||||||||    
T  2443906 ttttctatcatattcaaatttacacatgttaagaagtttaaaatagaaattttgtatt 2443963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 7170179 - 7170110
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||| ||||||||||||| || ||| ||||  || ||||||||||    
T  7170179 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgc 7170110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 42750459 - 42750418
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  42750459 ttttctatcatatgcaaatttgcatatgttaagaagtttaaa 42750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 7040253 - 7040321
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||| |||||| ||||||||||  |||||||||||||||||| || || |||||  || |||||||||    
T  7040253 tttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtg 7040321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 19889517 - 19889449
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||||||  |||| ||||||||||||| || ||| ||||  || |||||||||    
T  19889517 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 19889449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 26050462 - 26050506
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaat 211  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaat 26050506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 26059821 - 26059865
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaat 211  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaat 26059865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 28323311 - 28323247
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    ||||||||||| || ||||||   |||||||| || ||||||||||||| ||| |||||||||||    
T  28323311 ttttctatcatgtgtaaatttacacatgttaaaaaatttaaaataataattttatattagaactt 28323247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 41676561 - 41676630
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  ||||||||||| || |||||||||| ||||||||| |||||||||    
T  41676561 tttttctatcatgtgcaaatttgcacatgttaagaaattcaaaataataattttgtattaaaacttgtgc 41676630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 25465335 - 25465266
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||||||||||||| |||||| ||| |||| ||| ||||||||||    
T  25465335 tttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtgc 25465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 5875213 - 5875261
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  5875213 ggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 5875261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 32543052 - 32543120
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||| |||||||||||||||||  |||||||||||||| ||  || |||||||||||||||| ||||||    
T  32543052 ttttatatcatatgcaaatttgcacatgttaagaagttcaagttagtaagtttgtattagaatttgtgc 32543120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 6180363 - 6180296
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || ||| |||| ||||||||    
T  6180363 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgt 6180296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 36490956 - 36490889
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||||||  |||||||||  ||||||||||||||||||||| ||| |||| ||| ||||||||    
T  36490956 tttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgt 36490889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 34802150 - 34802100
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaat 211  Q
    ||||| |||||||||||| ||||||||||  ||||||||||||||||||||    
T  34802150 aatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaat 34802100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 35512902 - 35512836
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || ||| |||| |||||||    
T  35512902 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttg 35512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 3611928 - 3611883
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||    
T  3611928 tttttctatcatatgaaaatttgtacatgttaaaaagtttaaaata 3611883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 32201802 - 32201737
Alignment:
Q  166 atttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaact 231  Q
    |||||||||| || ||||||||||  ||| ||||||||||||||||||||| |||| ||| |||||    
T  32201802 atttttctattatgtgcaaatttgcacatattaagaagtttaaaataataaatttgcattggaact 32201737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 43317640 - 43317575
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    |||||| ||||| | |||||||   |||||||||||||||||||| |||||||| |||||||||||    
T  43317640 tttttcaatcatgtacaaatttacacatgttaagaagtttaaaattataagtttatattagaactt 43317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 313932 - 313884
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  313932 aatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 313884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 6307679 - 6307611
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||| |||||| ||||||||||  |||||||||||||||||| ||||| |||||  || |||||||||    
T  6307679 tttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtg 6307611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 13322053 - 13321986
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||  || |||||||| ||| ||||    
T  13322053 tttttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgt 13321986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 22167512 - 22167445
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||| ||||||| ||||||||||  |||| ||||||||||||||||  || |||||||| ||||||||    
T  22167512 ttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgt 22167445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 23591875 - 23591808
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  ||||||||||| ||| |||||| || |||| ||| ||||||||    
T  23591875 tttttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgt 23591808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 25532386 - 25532343
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaa 210  Q
    |||||||||||||||||||||||  |||||||| ||||||||||    
T  25532386 tttttctatcatatgcaaatttgcgcatgttaaaaagtttaaaa 25532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 51382491 - 51382444
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataat 214  Q
    |||||||||||| ||||| ||||  |||||||||||||||||||||||    
T  51382491 tttttctatcatgtgcaactttgcacatgttaagaagtttaaaataat 51382444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 1502721 - 1502775
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| ||||    
T  1502721 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 1502775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 6569986 - 6570028
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  6569986 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6570028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 23576415 - 23576469
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| ||||    
T  23576415 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 23576469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 30172056 - 30172014
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  30172056 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 30172014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 30187597 - 30187555
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  30187597 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 30187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 38812922 - 38812872
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||| |||||||||||| ||||||||||  |||||||||||||| ||||||    
T  38812922 atgggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaata 38812872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 39310787 - 39310845
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||||||||| ||||||||||  |||||||| ||||||||||||  || ||||||||    
T  39310787 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaaatagaaattttgtatt 39310845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 47355404 - 47355446
Alignment:
Q  192 catgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||    
T  47355404 catgttaagaaatttaaaataataaatttgtattggaacttgt 47355446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 6754648 - 6754579
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||| ||||||||||||| || ||| ||||  || ||||||||||    
T  6754648 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgc 6754579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 35438892 - 35438839
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagttt 220  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||  |||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagttt 35438839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 9516758 - 9516690
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| || |||||||  ||||||||||| ||||||||  ||||||| | ||| ||||||||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtg 9516690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 11013447 - 11013395
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtt 219  Q
    |||||||||| |||| |||||||  ||||||||||||||| ||| ||||||||    
T  11013447 tttttctatcgtatgtaaatttgcacatgttaagaagttttaaaaaataagtt 11013395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 34692536 - 34692464
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||| |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  34692536 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 34692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 8467830 - 8467790
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagttta 207  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  8467830 tttttctatcatatgcaaatttgtacatgttaagaagttta 8467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 14228122 - 14228193
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||| |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  14228122 atgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 14228193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 2830677 - 2830731
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataa 216  Q
    |||| |||||||||||| | ||||||||  |||||||||||||||||||||||||    
T  2830677 atgggtttttctatcatgtacaaatttgcacatgttaagaagtttaaaataataa 2830731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 17596523 - 17596449
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||||||| || ||| ||||  || ||||||||||    
T  17596523 atgggtttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgc 17596449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 28943770 - 28943836
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  28943770 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 28943836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 13391852 - 13391807
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  13391852 tttttctatcatgtgcaaatttgcgcatgttaagaagtttaaaata 13391807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 29863303 - 29863348
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  29863303 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 29863348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 31069578 - 31069651
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||||||||||||||| |||||||||   |||||||||||||||||| || ||| ||||  || |||||||||    
T  31069578 atggatttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtg 31069651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 31503924 - 31503851
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||||  || ||||||||||  ||||||||||| |||||| || ||||||| |||| |||||||||    
T  31503924 atggatttttctaatatgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtg 31503851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 30738163 - 30738123
Alignment:
Q  192 catgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  30738163 catgttaagaagtttaaaataataaatttgtattggaactt 30738123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 3261255 - 3261188
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| |||||||||   |||||||| ||||||||||||  || |||| ||||||||||||    
T  3261255 tttttctatcatgtgcaaatttacacatgttaaaaagtttaaaatagaaactttgcattagaacttgt 3261188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 8977461 - 8977536
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||| ||||||||||||| || |||||||  | |||||||||||| |||||| ||| ||||||||  |||||||||    
T  8977461 aatgaatttttctatcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgc 8977536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 10887206 - 10887164
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  10887206 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 10887164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 17552588 - 17552654
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| | || ||| |||||||    
T  17552588 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttg 17552654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 24979150 - 24979196
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataa 213  Q
    |||||||||||| ||||||||||  |||||||||| |||||||||||    
T  24979150 tttttctatcatgtgcaaatttgcacatgttaagatgtttaaaataa 24979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 6017036 - 6016991
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||    
T  6017036 ggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 6016991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 20979146 - 20979106
Alignment:
Q  170 ttctatcatatgcaaatttgttcatgttaagaagtttaaaa 210  Q
    ||||||||| ||||||||||  |||||||||||||||||||    
T  20979146 ttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 20979106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 27819628 - 27819672
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaat 211  Q
    |||||||||||| | ||||||||  ||||||||||||||||||||    
T  27819628 tttttctatcatgtacaaatttgcacatgttaagaagtttaaaat 27819672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 31790917 - 31790961
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaat 211  Q
    |||||||||||||||||||||||  ||| ||||||| ||||||||    
T  31790917 tttttctatcatatgcaaatttgcacatattaagaaatttaaaat 31790961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 3398397 - 3398330
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  3398397 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 3398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 31365951 - 31366019
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||||||| |||||||||||||||||| || ||| ||||  || |||||||||    
T  31365951 tttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtg 31366019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 32019985 - 32020053
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||  ||||||||| || |||||||||    
T  32019985 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtg 32020053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 23995417 - 23995484
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||| ||| ||| ||||  |||||||    
T  23995417 tttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgt 23995484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 15240951 - 15241009
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||||| ||| ||||||||    
T  15240951 tttttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtatt 15241009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 30839958 - 30839892
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  30839958 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 30839892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 36597756 - 36597690
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  36597756 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 36597690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 2795705 - 2795632
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||| |||||||||||| ||||||||||  |||||||||||||||||| || ||| ||||  || |||||||||    
T  2795705 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtg 2795632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 29855892 - 29855945
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataat 214  Q
    |||||||||||||||||| || |||||||  ||||||||||||||| |||||||    
T  29855892 aatggatttttctatcatgtgtaaatttgcacatgttaagaagttttaaataat 29855945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 30893805 - 30893752
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttg 30893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 12641994 - 12642062
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||||||| || ||||||||||  |||||||||||||||||| |||||| ||||  || |||||||||    
T  12641994 tttttctataatgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtg 12642062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 25395388 - 25395344
Alignment:
Q  192 catgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||    
T  25395388 catgttaagaagtttaaaataataaatttgtattaacacttgtgc 25395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 14466490 - 14466537
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||||| |||||||||   ||||||||||||||||||    
T  14466490 atggatttttctatcatgtgcaaatttagacatgttaagaagtttaaa 14466537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 14695114 - 14695181
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||| |||||| || ||||| |  ||||||||||||||||||| |||||||||  ||||||||||||    
T  14695114 tttttatatcatgtgaaaattcgcacatgttaagaagtttaaaaaaataagtttacattagaacttgt 14695181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 4047589 - 4047547
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  4047589 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 4047547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 6863733 - 6863667
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  |||||||| || ||||||||| ||| ||| |||| |||||||    
T  6863733 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttg 6863667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 8103581 - 8103650
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||| ||||||||||||| || ||| ||||  || ||||||||||    
T  8103581 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgc 8103650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 41350379 - 41350310
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||| |||||| ||||||||||  |||||||||||||||||| || ||| ||||  || ||||||||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgc 41350310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 34578191 - 34578143
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||| |||||| ||||||||||  |||||||| ||||||||||||    
T  34578191 ggatttttttatcatgtgcaaatttgcacatgttaaaaagtttaaaata 34578143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 18882268 - 18882335
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  18882268 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 18882335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 55814042 - 55813983
Alignment:
Q  166 atttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||| ||||||||    
T  55814042 atttttgtatcatatgcaaatttgcacatgttaaaaagtttaaaataataattttgtatt 55813983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 16667380 - 16667434
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataa 216  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||    
T  16667380 atggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataa 16667434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 50352479 - 50352413
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  50352479 tttttctatcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttg 50352413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 19450895 - 19450968
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||| ||||||||| || ||||||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  19450895 aatgggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 19450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 52391477 - 52391408
Alignment:
Q  165 gatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||||| || |||||||  |||||||||||||||||||||  || |||||||| ||||||||    
T  52391477 gatttttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 52391408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 53376409 - 53376478
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||| |||||| || |||||||  |||||||||||||||||||||| |||||||||||| ||| |||||    
T  53376409 tttttttatcatgtgaaaatttgcacatgttaagaagtttaaaataagaagtttgtattaaaacctgtgc 53376478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 17410006 - 17409934
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||| |||||||||||| ||||||||||  |||| ||||||||||||||||  || |||||||| ||||||||    
T  17410006 atgggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgt 17409934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 24685012 - 24684947
Alignment:
Q  169 tttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||| ||||||||||  |||||||||||||||||||||  || |||| ||| ||||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgt 24684947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 49181249 - 49181180
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  | |||||||||||| |||||| ||| ||||||||  |||||||||    
T  49181249 tttttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgc 49181180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 29190817 - 29190885
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||||||  |||||||||||||||||| || ||| ||||  || |||||||||    
T  29190817 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtg 29190885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 34941460 - 34941388
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||| |||||||||||| ||| ||||||  |||| |||||||||||||||| ||| |||| ||| ||||||||    
T  34941460 atgggtttttctatcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgt 34941388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 42479894 - 42479962
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||||||||| ||||||||||  ||||||||||| ||||| || |||| ||||| || ||||||||||    
T  42479894 ttttctatcatgtgcaaatttgcacatgttaagaaatttaatatgataaatttgtcttggaacttgtgc 42479962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 19468371 - 19468304
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||| || ||||||||||  |||||||||||||||||||||  || ||||||||  |||||||    
T  19468371 tttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgt 19468304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 23545653 - 23545586
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  |||||||| ||||||||||||  || |||||||| ||| ||||    
T  23545653 tttttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgt 23545586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 30192442 - 30192383
Alignment:
Q  173 tatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    |||||| |||||||||||  |||||| |||||| |||||  |||||||||||||||||||    
T  30192442 tatcatgtgcaaatttgtagatgttacgaagttcaaaatggtaagtttgtattagaactt 30192383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 35999943 - 35999990
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  35999943 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 35999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 27362568 - 27362526
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  27362568 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 27362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 39877007 - 39876941
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| || |||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  39877007 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 39876941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 44916644 - 44916710
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||| |||| || |||||||||  || ||||||||||||||||    
T  44916644 tttttctatcatgtgcaaatttgcacatattaaaaaatttaaaatagaaattttgtattagaacttg 44916710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 47326893 - 47326935
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  47326893 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 47326935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 47341689 - 47341731
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  47341689 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 47341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 48910803 - 48910845
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaagtttaaa 48910845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 49228837 - 49228763
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||| |||||||||||| ||||||||||  | |||||||||||||||| || ||| ||||  || |||||||||    
T  49228837 aatgggtttttctatcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactttgacttggaacttgtg 49228763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 54495638 - 54495680
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  54495638 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 54495680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 2097032 - 2096979
Alignment:
Q  183 aaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||  |||||||||||||| |||||  |||||||||||| ||||||||||    
T  2097032 aaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgc 2096979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 3085847 - 3085802
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  ||| |||||||||||||||||    
T  3085847 tttttctatcatgtgcaaatttgcacattttaagaagtttaaaata 3085802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 9971659 - 9971700
Alignment:
Q  165 gatttttctatcatatgcaaatttgttcatgttaagaagttt 206  Q
    |||||||||||||| ||||||||| | |||||||||||||||    
T  9971659 gatttttctatcatgtgcaaatttatacatgttaagaagttt 9971700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 23553750 - 23553705
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||    
T  23553750 ggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 23553705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 25843471 - 25843406
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    |||||||||||  |||||||||||  ||||||| ||||||||| || ||| ||||| |||||||||    
T  25843471 tttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaactt 25843406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 40049735 - 40049670
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaactt 232  Q
    ||||||||| || ||||||||||  ||||||||||| ||||||||| ||| |||| ||| ||||||    
T  40049735 tttttctattatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactt 40049670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 4779437 - 4779477
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagttta 207  Q
    |||||||||||| ||||||||||  ||||||||||||||||    
T  4779437 tttttctatcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 7349865 - 7349797
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| || |||||||| |||| ||||||||||||| || ||| ||||  ||| ||||||||    
T  7349865 tttttctatcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtg 7349797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 9759137 - 9759197
Alignment:
Q  161 aatggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttg 221  Q
    ||||| |||||||||||| | ||||||||  ||||||||||| ||||||||| ||| ||||    
T  9759137 aatgggtttttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttg 9759197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 51691523 - 51691451
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||| |||||||||||| || |||||||  ||||||||||| ||| ||||| ||| |||| ||| ||||||||    
T  51691523 atgggtttttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgt 51691451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 41159 - 41101
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    |||||||||||| || ||||||||  |||||||||||||||||||||||| ||||||||    
T  41159 tttttctatcatgtgtaaatttgtatatgttaagaagtttaaaataataattttgtatt 41101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 37115 - 37184
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||||||||||||||||| | |||| ||||  || ||||||||||    
T  37115 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgc 37184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 6765178 - 6765108
Alignment:
Q  166 atttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    ||||||||||||| || | |||||  ||||||||||||||||||| ||||| ||||||||| |||||||||    
T  6765178 atttttctatcatgtgtagatttgcacatgttaagaagtttaaaaaaataaatttgtattataacttgtgc 6765108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 20566018 - 20566086
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| |||||||||   |||||||||||||||||| || || ||||||||| |||||||||    
T  20566018 tttttctatcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtg 20566086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 9747494 - 9747427
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| |||||||||   ||||||||||||||||||||| ||| ||||| || ||||||||    
T  9747494 tttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgt 9747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 9895189 - 9895131
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||| ||| ||||    
T  9895189 tttttctatcatatgcaaattttcaaatgttaagaagtttaaaataataaatttatatt 9895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 8065300 - 8065255
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  8065300 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 8065255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 26003348 - 26003405
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtatt 225  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||  || ||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtatt 26003405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 19228601 - 19228534
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||||||||| ||||||||||  |||||||||||||||||| || ||| ||||  || |||||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtg 19228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 24729578 - 24729645
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||| ||| ||| ||||    
T  24729578 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgt 24729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 29157830 - 29157897
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    |||||||||||| ||||||||||  ||||||||||| ||| ||||| ||| |||| ||| ||||||||    
T  29157830 tttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgt 29157897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 36612756 - 36612799
Alignment:
Q  191 tcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  36612756 tcatgttaagaagtttaaaataaaaattttgtattaaaacttgt 36612799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 36620607 - 36620650
Alignment:
Q  191 tcatgttaagaagtttaaaataataagtttgtattagaacttgt 234  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  36620607 tcatgttaagaagtttaaaataaaaattttgtattaaaacttgt 36620650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 5583559 - 5583625
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    ||||||||||||  |||||||||  ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  5583559 tttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttg 5583625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 6109566 - 6109524
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  6109566 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6109524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 7757787 - 7757853
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| |||||||||   ||||||||||| ||||||||| ||| |||| ||| |||||||    
T  7757787 tttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttg 7757853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 15411624 - 15411678
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgt 222  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||| ||| |||||    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgt 15411678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 16126560 - 16126602
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  16126560 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 16126602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 38248421 - 38248487
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttg 233  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||| ||| |||  ||| |||||||    
T  38248421 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttg 38248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 14377600 - 14377559
Alignment:
Q  168 ttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||| ||||||||||| |||| |||||||||||||    
T  14377600 ttttctatcatgtgcaaatttgtacatgataagaagtttaaa 14377559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 16123458 - 16123413
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||| ||||||||||  |||| |||||||||||||    
T  16123458 ggatttttctatcatgtgcaaatttgcacatgataagaagtttaaa 16123413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 23932742 - 23932673
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||   || ||||||||||||||||| |||  ||||||  ||||||||||    
T  23932742 tttttctatcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgc 23932673  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 39607434 - 39607467
Alignment:
Q  192 catgttaagaagtttaaaataataagtttgtatt 225  Q
    ||||||||||| ||||||||||||||||||||||    
T  39607434 catgttaagaaatttaaaataataagtttgtatt 39607467  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 43388482 - 43388551
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  |||||||||||||| ||||   || ||||| ||| ||||||||||    
T  43388482 tttttctatcatgtgcaaatttgcacatgttaagaagttcaaaaaggtatgtttgcattggaacttgtgc 43388551  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 45062375 - 45062306
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtgc 236  Q
    |||||||||||| ||||||||||  ||| |||||||||| |||||| ||| ||| | || ||||||||||    
T  45062375 tttttctatcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgc 45062306  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 5853464 - 5853504
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagttta 207  Q
    |||||||||||| ||||||||||  ||||||||||||||||    
T  5853464 tttttctatcatgtgcaaatttgcacatgttaagaagttta 5853504  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 9450434 - 9450366
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||| ||  ||||||||||| |||||| || || ||||||||| ||| |||||    
T  9450434 tttttctatcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtg 9450366  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 16493533 - 16493573
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagttta 207  Q
    |||||||||||| ||||||||||  ||||||||||||||||    
T  16493533 tttttctatcatgtgcaaatttgcacatgttaagaagttta 16493573  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 27665045 - 27665113
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| ||||||||||  |||| ||||||||||||| || ||| ||||  || |||||||||    
T  27665045 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 27665113  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 36731357 - 36731289
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||||||||||| || ||||||   ||||||||||| ||||||||  ||| ||||| ||||||||||||    
T  36731357 tttttctatcatgtgtaaatttacacatgttaagaaatttaaaatggtaaatttgtcttagaacttgtg 36731289  T

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Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 52775 - 52848
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||| |||||||||||| ||||||||||  |||||||||||||||||| || ||| ||||  || |||||||||    
T  52775 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtg 52848  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 145859 - 145786
Alignment:
Q  162 atggatttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    |||| |||||||||||| ||||||||||  |||||||||||||||||| || ||| ||||  || |||||||||    
T  145859 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtg 145786  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 13262 - 13217
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaata 212  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||    
T  13262 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 13217  T

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Target: scaffold0073 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 16536 - 16604
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||| |||||| ||||||||||  |||||||||||||||||| ||||| |||||  || |||||||||    
T  16536 tttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtg 16604  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 182219 - 182177
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  182219 tttttctatcatgtgtaaatttgtacatgttaagaagtttaaa 182177  T

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Target: scaffold0727 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 5871 - 5826
Alignment:
Q  164 ggatttttctatcatatgcaaatttgttcatgttaagaagtttaaa 209  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||    
T  5871 ggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 5826  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 13564 - 13632
Alignment:
Q  167 tttttctatcatatgcaaatttgttcatgttaagaagtttaaaataataagtttgtattagaacttgtg 235  Q
    ||||||||  || ||||||||||  |||||||||||||||||| || |||||||| |||  ||||||||    
T  13564 tttttctaatatgtgcaaatttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttgtg 13632  T

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