View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14142_low_8 (Length: 508)
Name: NF14142_low_8
Description: NF14142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14142_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 7 - 490
Target Start/End: Original strand, 32110165 - 32110651
Alignment:
| Q |
7 |
tgggtagattatactgaagtatatcaaaaaattaaaataagactaactacaattttagttatcgtttgtatattgtagtagcaccgcgttttgtggggtt |
106 |
Q |
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|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32110165 |
tgggtacattataatgaagtatatcaaaaaattaaaataagactaactacaattttagttatcttttgtatattgtagtagcaccgcgttttgtggggtt |
32110264 |
T |
|
| Q |
107 |
catctttatgtgctggattagcctgtcaaaagcagcaccttcgctgtgctctcattgtttggcatccaattcattgtgtatatctatctaatcattcatg |
206 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32110265 |
catctttttgtgctggattagcctgtcaaaagcagcaccttcgctgtgctctcattgtttggcatccaattcattgtgtata--tatctaatcattcatg |
32110362 |
T |
|
| Q |
207 |
aacacgtttcacgtactctttctataaatacttataagcnnnnnnngtaatctcacttcatatcatatagtacttgaatcctccacacactatggcattc |
306 |
Q |
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||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
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| T |
32110363 |
aacacatttcacgtactctttctataaatacttataagc-ttctttgtaatctcacttcatatcatatagtacttgaatcctccacatacgatggcattc |
32110461 |
T |
|
| Q |
307 |
tctagaagcttcattgtttcatcacttctcctctcacttgttctttttcatatggttgaagcacaccaacttgtaaggcatacttgtcttctttgaccta |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32110462 |
tctagaagcttcattgtttcatcacttctcctctcacttgttctttttcatatggttgaagcacaccaacttgtaaggcatacttgtcttctttgaccta |
32110561 |
T |
|
| Q |
407 |
tatacttcctctctttcttatatcatgtgttcctttatcatatttgtctcaaa------ttatttacttgtcatcattctataatgatac |
490 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
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| T |
32110562 |
tatacttcctctctttcttatatcatgtgttcctttatcatatttgtctcaaattattcttatttatttgtcatcattctataatgatac |
32110651 |
T |
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