View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14143_low_18 (Length: 282)

Name: NF14143_low_18
Description: NF14143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14143_low_18
NF14143_low_18
[»] chr1 (33 HSPs)
chr1 (1-275)||(21378165-21378424)
chr1 (1-42)||(22077246-22077287)
chr1 (1-42)||(24600438-24600479)
chr1 (1-42)||(44685449-44685490)
chr1 (1-49)||(45839613-45839661)
chr1 (3-46)||(41184551-41184594)
chr1 (1-43)||(66596-66638)
chr1 (3-45)||(34364497-34364539)
chr1 (3-45)||(34364915-34364957)
chr1 (3-45)||(35154165-35154207)
chr1 (3-45)||(37556101-37556143)
chr1 (7-45)||(37850730-37850768)
chr1 (3-45)||(41142362-41142404)
chr1 (1-42)||(1188712-1188753)
chr1 (1-42)||(19283579-19283620)
chr1 (1-42)||(22077619-22077660)
chr1 (3-43)||(17294569-17294609)
chr1 (3-47)||(31767287-31767331)
chr1 (1-45)||(39066324-39066368)
chr1 (3-43)||(41157367-41157407)
chr1 (6-45)||(26661651-26661690)
chr1 (3-46)||(41156980-41157023)
chr1 (1-43)||(5320089-5320131)
chr1 (1-43)||(22793270-22793312)
chr1 (3-45)||(34649428-34649470)
chr1 (14-47)||(29798187-29798220)
chr1 (3-44)||(40082398-40082439)
chr1 (3-35)||(3537273-3537305)
chr1 (3-35)||(44290584-44290616)
chr1 (3-35)||(44290951-44290983)
chr1 (3-39)||(45084378-45084414)
chr1 (3-35)||(50051777-50051809)
chr1 (14-42)||(50469218-50469246)
[»] chr6 (16 HSPs)
chr6 (3-47)||(2579998-2580042)
chr6 (12-43)||(6071124-6071155)
chr6 (12-43)||(7588359-7588390)
chr6 (3-45)||(2579231-2579273)
chr6 (12-45)||(2578577-2578610)
chr6 (14-43)||(8481919-8481948)
chr6 (5-42)||(10073742-10073779)
chr6 (1-42)||(10074115-10074156)
chr6 (1-42)||(10074487-10074528)
chr6 (6-46)||(2377743-2377783)
chr6 (3-35)||(2378126-2378158)
chr6 (3-35)||(14748464-14748496)
chr6 (3-35)||(26544049-26544081)
chr6 (3-35)||(29518503-29518535)
chr6 (3-35)||(29518920-29518952)
chr6 (3-35)||(32741179-32741211)
[»] chr5 (23 HSPs)
chr5 (3-47)||(12662778-12662822)
chr5 (1-42)||(36568691-36568732)
chr5 (3-42)||(13415886-13415925)
chr5 (7-46)||(15370088-15370127)
chr5 (3-46)||(36492343-36492386)
chr5 (3-45)||(299479-299521)
chr5 (3-45)||(26074908-26074950)
chr5 (1-43)||(31509615-31509657)
chr5 (7-45)||(35150737-35150775)
chr5 (7-45)||(35151028-35151066)
chr5 (3-45)||(40296441-40296483)
chr5 (1-42)||(1028641-1028682)
chr5 (3-40)||(35150002-35150039)
chr5 (3-42)||(13785735-13785774)
chr5 (3-42)||(26074272-26074311)
chr5 (3-45)||(6224186-6224228)
chr5 (1-43)||(36527207-36527249)
chr5 (3-45)||(42405722-42405764)
chr5 (1-42)||(24489328-24489369)
chr5 (1-42)||(36522020-36522061)
chr5 (1-42)||(41632775-41632816)
chr5 (3-35)||(5723917-5723949)
chr5 (3-35)||(32487394-32487426)
[»] chr8 (20 HSPs)
chr8 (3-45)||(9309345-9309387)
chr8 (1-42)||(9608738-9608779)
chr8 (1-42)||(41972151-41972192)
chr8 (3-47)||(3038416-3038460)
chr8 (3-45)||(147819-147861)
chr8 (3-45)||(45122996-45123038)
chr8 (1-42)||(4154790-4154831)
chr8 (3-48)||(30359258-30359303)
chr8 (2-42)||(18645712-18645752)
chr8 (3-45)||(6876988-6877031)
chr8 (2-45)||(8918889-8918932)
chr8 (3-46)||(25561942-25561985)
chr8 (3-45)||(147441-147483)
chr8 (14-44)||(5915863-5915893)
chr8 (3-45)||(8794101-8794143)
chr8 (3-45)||(34834866-34834908)
chr8 (3-40)||(45122183-45122220)
chr8 (3-35)||(3670060-3670092)
chr8 (3-35)||(6731904-6731936)
chr8 (14-42)||(9308970-9308998)
[»] chr7 (26 HSPs)
chr7 (3-45)||(1085742-1085784)
chr7 (3-45)||(7517570-7517612)
chr7 (3-45)||(7554015-7554057)
chr7 (1-42)||(8128565-8128606)
chr7 (3-46)||(43241484-43241527)
chr7 (3-45)||(24177425-24177467)
chr7 (3-45)||(30244260-30244302)
chr7 (3-45)||(30244691-30244733)
chr7 (3-45)||(30245484-30245526)
chr7 (3-45)||(30255329-30255371)
chr7 (3-45)||(36622950-36622992)
chr7 (3-45)||(41910720-41910762)
chr7 (1-42)||(28301667-28301708)
chr7 (1-45)||(118425-118469)
chr7 (1-45)||(16569186-16569230)
chr7 (1-45)||(16596432-16596476)
chr7 (15-46)||(40094912-40094943)
chr7 (3-45)||(23503-23545)
chr7 (3-45)||(22566788-22566830)
chr7 (3-45)||(30245067-30245109)
chr7 (3-45)||(36967355-36967397)
chr7 (3-45)||(45434626-45434668)
chr7 (3-44)||(36109043-36109084)
chr7 (7-44)||(36939863-36939900)
chr7 (14-42)||(40094531-40094559)
chr7 (14-46)||(45754705-45754737)
[»] chr4 (32 HSPs)
chr4 (3-45)||(52884877-52884919)
chr4 (1-42)||(2740693-2740734)
chr4 (3-47)||(25483324-25483368)
chr4 (3-47)||(34646773-34646817)
chr4 (3-46)||(4955441-4955484)
chr4 (3-42)||(52884688-52884727)
chr4 (3-45)||(3341118-3341160)
chr4 (3-45)||(10245910-10245952)
chr4 (3-45)||(22028085-22028127)
chr4 (3-45)||(22183388-22183430)
chr4 (3-45)||(36608785-36608827)
chr4 (3-45)||(49076572-49076614)
chr4 (1-42)||(3244573-3244614)
chr4 (1-45)||(16888938-16888983)
chr4 (1-42)||(36629230-36629271)
chr4 (4-41)||(44620654-44620691)
chr4 (3-43)||(3700357-3700397)
chr4 (3-43)||(41707588-41707628)
chr4 (3-46)||(1731771-1731814)
chr4 (3-46)||(11706645-11706688)
chr4 (1-47)||(16889658-16889705)
chr4 (3-46)||(19504694-19504737)
chr4 (7-45)||(36572009-36572047)
chr4 (3-45)||(39404388-39404430)
chr4 (3-45)||(50002416-50002458)
chr4 (1-42)||(2741064-2741105)
chr4 (16-45)||(23817783-23817812)
chr4 (1-42)||(28034222-28034263)
chr4 (1-42)||(39792982-39793023)
chr4 (1-42)||(54741300-54741341)
chr4 (3-35)||(41370357-41370389)
chr4 (15-43)||(45050593-45050621)
[»] chr3 (35 HSPs)
chr3 (1-43)||(12747876-12747918)
chr3 (3-45)||(25739551-25739593)
chr3 (1-46)||(1634439-1634484)
chr3 (1-45)||(32463025-32463069)
chr3 (3-42)||(8327897-8327936)
chr3 (3-46)||(15772843-15772886)
chr3 (3-46)||(29645028-29645071)
chr3 (1-40)||(39336353-39336392)
chr3 (3-46)||(52634665-52634708)
chr3 (3-46)||(53577353-53577396)
chr3 (1-47)||(12114686-12114732)
chr3 (7-45)||(15773182-15773220)
chr3 (3-45)||(31190007-31190049)
chr3 (3-45)||(42342514-42342556)
chr3 (3-45)||(43346640-43346682)
chr3 (3-45)||(45901703-45901745)
chr3 (1-42)||(9240142-9240183)
chr3 (4-45)||(29644708-29644749)
chr3 (15-48)||(39914239-39914272)
chr3 (3-43)||(54017942-54017982)
chr3 (3-42)||(33803378-33803417)
chr3 (3-42)||(35946515-35946554)
chr3 (3-45)||(11661525-11661567)
chr3 (3-45)||(22304074-22304116)
chr3 (7-45)||(32462689-32462727)
chr3 (1-43)||(33809132-33809174)
chr3 (3-45)||(37990765-37990807)
chr3 (3-45)||(43346917-43346959)
chr3 (3-45)||(53118100-53118142)
chr3 (12-45)||(3135596-3135629)
chr3 (1-42)||(21832467-21832508)
chr3 (1-42)||(47964642-47964683)
chr3 (1-46)||(49336811-49336856)
chr3 (3-35)||(22304246-22304278)
chr3 (3-35)||(50612578-50612610)
[»] chr2 (29 HSPs)
chr2 (3-45)||(31468872-31468914)
chr2 (3-45)||(36785689-36785731)
chr2 (3-45)||(38796344-38796386)
chr2 (1-42)||(28531438-28531479)
chr2 (3-48)||(38796746-38796791)
chr2 (3-45)||(3673075-3673117)
chr2 (3-45)||(16542439-16542481)
chr2 (3-45)||(29676893-29676935)
chr2 (1-42)||(962591-962632)
chr2 (1-42)||(33954385-33954426)
chr2 (3-40)||(35580849-35580886)
chr2 (1-46)||(36006003-36006048)
chr2 (1-42)||(40679753-40679794)
chr2 (1-45)||(28254361-28254405)
chr2 (1-49)||(43443106-43443154)
chr2 (7-46)||(3672708-3672747)
chr2 (3-42)||(37632723-37632762)
chr2 (3-45)||(6421294-6421336)
chr2 (3-45)||(6421375-6421417)
chr2 (3-45)||(15880253-15880295)
chr2 (12-42)||(16590881-16590911)
chr2 (1-43)||(30323456-30323498)
chr2 (3-45)||(31899552-31899594)
chr2 (1-43)||(37895185-37895227)
chr2 (1-42)||(33561575-33561616)
chr2 (3-35)||(36178731-36178763)
chr2 (3-35)||(37106188-37106220)
chr2 (3-35)||(41283601-41283633)
chr2 (18-46)||(43779810-43779838)
[»] scaffold0734 (2 HSPs)
scaffold0734 (3-46)||(5385-5428)
scaffold0734 (3-45)||(5767-5809)
[»] scaffold0391 (2 HSPs)
scaffold0391 (3-45)||(3111-3153)
scaffold0391 (3-45)||(1232-1274)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-43)||(39830-39872)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-43)||(5349-5391)
scaffold0078 (5-46)||(4971-5012)
[»] scaffold0171 (1 HSPs)
scaffold0171 (15-45)||(17594-17624)
[»] scaffold0702 (2 HSPs)
scaffold0702 (3-35)||(268-300)
scaffold0702 (6-46)||(643-683)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 21378165 - 21378424
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaaagtctactgtagcatttcaagtgaaaataaccaataagaataggaatactagca 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||            |||||||||||||||||||||||    
T  21378165 tctatccgatctgggacatataactgacacttgcacacaacaacaaagtctactctagcatttcaca----------caataagaataggaatactagca 21378254  T
Q  101 attaaattgtaaattaaatggtaaacgaacttactgtaaaacaccgatgggaaagacatggagacttttgatgtttgaagcagttgcaccaataaaagca 200  Q
    |||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21378255 attaaattgtaaa-----tggtaaacgaacttactgtaaaacaccgatgggaaagacatggagacttttgatgtttgaagcagttgcaccaagaaaagca 21378349  T
Q  201 ccagtcacaatgccctttccacttccttgagttaccacaatgttgtctggaactccactcagtattatctaccca 275  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  21378350 ccagtcacaatgccctttccacttccttgagttaccacaatgttatctggaactccactcagtattgtcttccca 21378424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22077246 - 22077287
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  22077246 tctatccgatgtgggacatataactcacacttgcacacaaca 22077287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24600438 - 24600479
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  24600438 tctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44685490 - 44685449
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  44685490 tctatccgatatgggacatataactcacacttgcacacaaca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45839661 - 45839613
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaaagt 49  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  45839661 tctatccgatgtgggacatataactcatacttgtacacaacaacaaagt 45839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 41184551 - 41184594
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  41184551 tatccgatgtgagacatataactcacacttgcacacaacaacaa 41184594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 66596 - 66638
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  66596 tctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34364539 - 34364497
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  34364539 tatccgatgtgagacatataactcacacttgcacacaacaaca 34364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34364957 - 34364915
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  34364957 tatccgatgtgtgacatataactcacacttgcacacaacaaca 34364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 35154165 - 35154207
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  35154165 tatctgatgtgggacatataactcacacttgcacacaacaaca 35154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 37556143 - 37556101
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  37556143 tatccgatgtgggacatataactcacacttgtacacaacaaca 37556101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 37850730 - 37850768
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  37850730 cgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 41142404 - 41142362
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  41142404 tatccgatgtgggacatataactcacacttgcacagaacaaca 41142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1188712 - 1188753
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  1188712 tctatccgatatggaacatataactcacacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19283579 - 19283620
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  19283579 tctatccggtgtgggacatataactcacacttgcacacaaca 19283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22077619 - 22077660
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  22077619 tctatccgatgtgagacatataactcacacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 17294609 - 17294569
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  17294609 tatccgatgtgggacatataactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 31767287 - 31767331
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||    
T  31767287 tatccgatgtggaacatataacccacacttgcacacaacaacaaa 31767331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39066324 - 39066368
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||    
T  39066324 tctatccgatgtggaatatataactcacacttgcacacaacaaca 39066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 41157407 - 41157367
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  41157407 tatctgatgtgggacatataactcacacttgcacacaacaa 41157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 26661651 - 26661690
Alignment:
Q  6 ccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  26661651 ccgatgtgggacatataactcacacttgtacacaacaaca 26661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 41157023 - 41156980
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||| | |||||||||||| ||||||||||||||||||||||    
T  41157023 tatccgttatgggacatataattcacacttgcacacaacaacaa 41156980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5320089 - 5320131
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  5320089 tctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22793312 - 22793270
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||    
T  22793312 tctatacgatgtgggacatataactcacacttgctcacaacaa 22793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34649470 - 34649428
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||| | |||||||||    
T  34649470 tatccgatgtgggacatataactcacacttgtatacaacaaca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 29798220 - 29798187
Alignment:
Q  14 ggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||||||||||||||||| |||||||||||    
T  29798220 ggacatataactcacacttgcatacaacaacaaa 29798187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40082439 - 40082398
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaac 44  Q
    |||||||| | ||||||||||||||||||||| |||||||||    
T  40082439 tatccgatgtaggacatataactcacacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 3537273 - 3537305
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  3537273 tatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 44290584 - 44290616
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  44290584 tatccgatgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 44290951 - 44290983
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  44290951 tatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 45084414 - 45084378
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacaca 39  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  45084414 tatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 50051777 - 50051809
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  50051777 tatccgatgtgggacatataactcacacttgca 50051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 50469218 - 50469246
Alignment:
Q  14 ggacatataactcacacttgcacacaaca 42  Q
    |||||||||||||||||||||||||||||    
T  50469218 ggacatataactcacacttgcacacaaca 50469246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 2579998 - 2580042
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  2579998 tatccgatgtgggacatataactcacacttgcacacaacaacaaa 2580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 6071155 - 6071124
Alignment:
Q  12 tgggacatataactcacacttgcacacaacaa 43  Q
    ||||||||||||||||||||||||||||||||    
T  6071155 tgggacatataactcacacttgcacacaacaa 6071124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 43
Target Start/End: Original strand, 7588359 - 7588390
Alignment:
Q  12 tgggacatataactcacacttgcacacaacaa 43  Q
    ||||||||||||||||||||||||||||||||    
T  7588359 tgggacatataactcacacttgcacacaacaa 7588390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 2579231 - 2579273
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||| ||||||| |||||||||||    
T  2579231 tatccgatgtgggacatataactaacacttgtacacaacaaca 2579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 2578577 - 2578610
Alignment:
Q  12 tgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||||||||||||||| |||||||||||    
T  2578577 tgggacatataactcacacttgtacacaacaaca 2578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 43
Target Start/End: Complemental strand, 8481948 - 8481919
Alignment:
Q  14 ggacatataactcacacttgcacacaacaa 43  Q
    ||||||||||||||||||||||||||||||    
T  8481948 ggacatataactcacacttgcacacaacaa 8481919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 10073742 - 10073779
Alignment:
Q  5 tccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  10073742 tccgatgtgggacatataactaacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10074115 - 10074156
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| ||||| ||||||||||| |||||||||||||    
T  10074115 tctatccgatgtgggatatataactcacccttgcacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10074487 - 10074528
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  10074487 tctatccgatgtgggacctctaactcacacttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 2377783 - 2377743
Alignment:
Q  6 ccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    ||||| ||||||||||||||||||||||  |||||||||||    
T  2377783 ccgatgtgggacatataactcacacttgtgcacaacaacaa 2377743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 2378158 - 2378126
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  2378158 tatccgatgtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 14748464 - 14748496
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  14748464 tatccgatgtgggacatataactcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 26544081 - 26544049
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  26544081 tatccgatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 29518535 - 29518503
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  29518535 tatccgatgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 29518952 - 29518920
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  29518952 tatccgatgtgggacatataactcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 32741211 - 32741179
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  32741211 tatccgatgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 12662778 - 12662822
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  12662778 tatccgatgtgggacatataactcacacttgcacacaacaacaaa 12662822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36568691 - 36568732
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  36568691 tctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 13415886 - 13415925
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  13415886 tatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 15370127 - 15370088
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  15370127 cgatgtgggacatataactcacacttgcacacaacaacaa 15370088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 36492343 - 36492386
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  36492343 tatccgatgtgggacatataactcacacttgcaaacaacaacaa 36492386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 299521 - 299479
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||| ||||||||||    
T  299521 tatccgatgtgggacatataactcacacttgcgcacaacaaca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26074908 - 26074950
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  26074908 tatccgatgtgggacatataactcacacttgtacacaacaaca 26074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31509657 - 31509615
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  31509657 tctatccgatgtgagacatataactcacacttgcacacaacaa 31509615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 35150775 - 35150737
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  35150775 cgatgtgggacatataactcacacttgcacacaacaaca 35150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 35151066 - 35151028
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  35151066 cgatgtgggacatataactcacacttgcacacaacaaca 35151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 40296441 - 40296483
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  40296441 tatccgatgtgggacatataactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1028641 - 1028682
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  1028641 tctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 35150039 - 35150002
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaa 40  Q
    |||||||| |||||||||||||||||||||||||||||    
T  35150039 tatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 13785735 - 13785774
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  13785735 tatccgatttgggacatataactcacacttccacacaaca 13785774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 26074272 - 26074311
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  26074272 tatccgatgtgtgacatataactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 6224228 - 6224186
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||  |||||||||||||||||||||| |||||||||||    
T  6224228 tatccgaagtgggacatataactcacacttgtacacaacaaca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36527207 - 36527249
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||| ||| |||||||||||||||||||||| |||||||||    
T  36527207 tctatctgatgtgggacatataactcacacttgtacacaacaa 36527249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 42405722 - 42405764
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| | |||||||||||||||||||| |||||||||||    
T  42405722 tatccgatgttggacatataactcacacttgtacacaacaaca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24489328 - 24489369
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  24489328 tctatctgatgtgggacatataactcacacttgaacacaaca 24489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36522020 - 36522061
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| ||||||||||||||||||||||| |||||||    
T  36522020 tctatctgatgtgggacatataactcacacttgcgcacaaca 36522061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41632816 - 41632775
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| || ||||||||||| ||||||||||||||||    
T  41632816 tctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 5723917 - 5723949
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  5723917 tatccgatgtgggacatataactcacacttgca 5723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 32487426 - 32487394
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  32487426 tatccgatgtgggacatataactcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 9309387 - 9309345
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9309387 tatccgatgtgggacatataactcacacttgcacacaacaaca 9309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9608779 - 9608738
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  9608779 tctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41972192 - 41972151
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  41972192 tctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 3038416 - 3038460
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  3038416 tatccgatgtgggacatataactcacacttgtacacaacaacaaa 3038460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 147861 - 147819
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  147861 tatcagatgtgggacatataactcacacttgcacacaacaaca 147819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 45123038 - 45122996
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  45123038 tatccgatgtgggacatataactcacacttgcacacagcaaca 45122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4154790 - 4154831
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  4154790 tctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 30359303 - 30359258
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaag 48  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||    
T  30359303 tatccgatgtgagacatataactcacacttgtacacaacaacaaag 30359258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 18645712 - 18645752
Alignment:
Q  2 ctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaaca 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 6876988 - 6877031
Alignment:
Q  3 tatccgatctgggac-atataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  6876988 tatccgatgtgggactatataactcacacttgcacacaacaaca 6877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 8918889 - 8918932
Alignment:
Q  2 ctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||    
T  8918889 ctatctgatgtgggacatgtaactcacacttgcacacaacaaca 8918932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 25561942 - 25561985
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| |||||||||||||||||||||| | ||||||||||    
T  25561942 tatccgatgtgggacatataactcacacttgtagacaacaacaa 25561985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 147483 - 147441
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||    
T  147483 tatccgatgtgggacatataactcacacttacacgcaacaaca 147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 5915893 - 5915863
Alignment:
Q  14 ggacatataactcacacttgcacacaacaac 44  Q
    |||||||||||||||||||||||||||||||    
T  5915893 ggacatataactcacacttgcacacaacaac 5915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 8794143 - 8794101
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| || ||||||||||||||||||| |||||||||||    
T  8794143 tatccgatgtgagacatataactcacacttgtacacaacaaca 8794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34834908 - 34834866
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| || |||||||||||||||||||||| |||||||||||    
T  34834908 tatccaatgtgggacatataactcacacttgtacacaacaaca 34834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 45122183 - 45122220
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaa 40  Q
    |||||||| || ||||||||||||||||||||||||||    
T  45122183 tatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 3670092 - 3670060
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  3670092 tatccgatgtgggacatataactcacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 6731936 - 6731904
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  6731936 tatccgatgtgggacatataactcacacttgca 6731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 9308998 - 9308970
Alignment:
Q  14 ggacatataactcacacttgcacacaaca 42  Q
    |||||||||||||||||||||||||||||    
T  9308998 ggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 1085742 - 1085784
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  1085742 tatccgatgtgggacatataactcacacttgcacacaacaaca 1085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 7517612 - 7517570
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7517612 tatccgatgtgggacatataactcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 7554057 - 7554015
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7554057 tatccgatgtgggacatataactcacacttgcacacaacaaca 7554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8128565 - 8128606
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  8128565 tctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 43241527 - 43241484
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  43241527 tatccgatgtggaacatataactcacacttgcacacaacaacaa 43241484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 24177467 - 24177425
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  24177467 tatccgatgtgggacatataactcatacttgcacacaacaaca 24177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30244302 - 30244260
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  30244302 tatccgatgtgggacatataactcacacttgtacacaacaaca 30244260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30244733 - 30244691
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  30244733 tatccaatgtgggacatataactcacacttgcacacaacaaca 30244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30245526 - 30245484
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  30245526 tatctgatgtgggacatataactcacacttgcacacaacaaca 30245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30255371 - 30255329
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  30255371 tatccgatgtgggacatataacgcacacttgcacacaacaaca 30255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 36622992 - 36622950
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  36622992 tatccgatgtgggacatataactcacacttgcacacaataaca 36622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 41910720 - 41910762
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||| ||||||||||||    
T  41910720 tatccgatgtgggacatataactcacacttacacacaacaaca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28301667 - 28301708
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  28301667 tctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 118425 - 118469
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||    
T  118425 tctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16569230 - 16569186
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||| || ||||||||||||||||||||| |||||||||    
T  16569230 tctatccgatgtgagacatataactcacacttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16596432 - 16596476
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||| || ||||||||||||||||||||| |||||||||    
T  16596432 tctatccgatgtgagacatataactcacacttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 46
Target Start/End: Original strand, 40094912 - 40094943
Alignment:
Q  15 gacatataactcacacttgcacacaacaacaa 46  Q
    ||||||||||||||||||||||||||||||||    
T  40094912 gacatataactcacacttgcacacaacaacaa 40094943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 23503 - 23545
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| |||||||||||||| |||||||||||||||    
T  23503 tatccgatgtggaacatataactcacaattgcacacaacaaca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 22566788 - 22566830
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||| ||||||||||||| |||||||||    
T  22566788 tatccgatgtgggacatattactcacacttgcatacaacaaca 22566830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 30245109 - 30245067
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| |||||||||||||||||| |||||||||||    
T  30245109 tatccgatgtggaacatataactcacacttgtacacaacaaca 30245067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 36967355 - 36967397
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| || ||||||||||||||||||| |||||||||||    
T  36967355 tatccgatgtgagacatataactcacacttgtacacaacaaca 36967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 45434668 - 45434626
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||| ||||||| |||||||||||    
T  45434668 tatccgatgtgggacatataacttacacttgtacacaacaaca 45434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 36109043 - 36109084
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaac 44  Q
    |||||||| || || |||||||||||||||||||||||||||    
T  36109043 tatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 36939863 - 36939900
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaac 44  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  36939863 cgatttgggacatataactcacacttgcacagaacaac 36939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 40094531 - 40094559
Alignment:
Q  14 ggacatataactcacacttgcacacaaca 42  Q
    |||||||||||||||||||||||||||||    
T  40094531 ggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 45754737 - 45754705
Alignment:
Q  14 ggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||||||||||||||| ||||||||||||    
T  45754737 ggacatataactcacacttgtacacaacaacaa 45754705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 52884919 - 52884877
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  52884919 tatccgatgtgggacatataactcacacttgcacacaacaaca 52884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2740734 - 2740693
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  2740734 tctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 25483368 - 25483324
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  25483368 tatccgatgtgagacatataactcacacttgcacacaacaacaaa 25483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 34646773 - 34646817
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  34646773 tatccgatgtgggacatataactcacacttgtacacaacaacaaa 34646817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 4955441 - 4955484
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  4955441 tatccgatatgagacatataactcacacttgcacacaacaacaa 4955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 52884727 - 52884688
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  52884727 tatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 3341160 - 3341118
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  3341160 tatccaatgtgggacatataactcacacttgcacacaacaaca 3341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 10245952 - 10245910
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  10245952 tatccgatgtggggcatataactcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 22028085 - 22028127
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  22028085 tatccgatgtgggacatataagtcacacttgcacacaacaaca 22028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 22183388 - 22183430
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  22183388 tatccgatgtgggatatataactcacacttgcacacaacaaca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 36608785 - 36608827
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  36608785 tatccgatgttggacatataactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 49076572 - 49076614
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  49076572 tatccgatatggtacatataactcacacttgcacacaacaaca 49076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3244573 - 3244614
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  3244573 tctatccgatgtgagacatataactcacacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16888938 - 16888983
Alignment:
Q  1 tctatccgatctgggacatataactcacacttg-cacacaacaaca 45  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  16888938 tctatccgatgtgggacatataactcacacttgccacacaacaaca 16888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36629271 - 36629230
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  36629271 tctatccgatgtgggacatataactcacacttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 44620691 - 44620654
Alignment:
Q  4 atccgatctgggacatataactcacacttgcacacaac 41  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  44620691 atccgatgtgggacatataactcacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3700397 - 3700357
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  3700397 tatccgatgtaggacatataactcacacttgcacacaacaa 3700357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 41707588 - 41707628
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  41707588 tatccgatgtgggacatataactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 1731771 - 1731814
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||    
T  1731771 tatctgatgtgggacatataactcacatttgcacacaacaacaa 1731814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 11706645 - 11706688
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||    
T  11706645 tatccgatgtgggacatacaactcacccttgcacacaacaacaa 11706688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16889658 - 16889705
Alignment:
Q  1 tctatccgatctgggacatataactcacacttg-cacacaacaacaaa 47  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||    
T  16889658 tctatccgatttgagacatataactcacacttgccacacaacaacaaa 16889705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 19504737 - 19504694
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||    
T  19504737 tatccgatatgggacatataactcatacttgtacacaacaacaa 19504694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 36572047 - 36572009
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  36572047 cgatgtgggacatataactcacacttgtacacaacaaca 36572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 39404430 - 39404388
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| |||||||||||||||||||||| |||||||||||    
T  39404430 tatctgatgtgggacatataactcacacttgtacacaacaaca 39404388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 50002458 - 50002416
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| || ||||||||||||||||||||| |||||||||    
T  50002458 tatccgatgtgagacatataactcacacttgcaaacaacaaca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2741105 - 2741064
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| |||||||||||||||||||||||||| ||||    
T  2741105 tctatctgatgtgggacatataactcacacttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 23817783 - 23817812
Alignment:
Q  16 acatataactcacacttgcacacaacaaca 45  Q
    ||||||||||||||||||||||||||||||    
T  23817783 acatataactcacacttgcacacaacaaca 23817812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28034263 - 28034222
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    ||||||||||  ||||||||||| ||||||||||||||||||    
T  28034263 tctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39792982 - 39793023
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  39792982 tctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54741300 - 54741341
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  54741300 tctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 41370389 - 41370357
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  41370389 tatccgatttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 45050621 - 45050593
Alignment:
Q  15 gacatataactcacacttgcacacaacaa 43  Q
    |||||||||||||||||||||||||||||    
T  45050621 gacatataactcacacttgcacacaacaa 45050593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12747876 - 12747918
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  12747876 tctatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 25739551 - 25739593
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  25739551 tatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1634439 - 1634484
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  1634439 tctatccgatgtgggacatataactcacacttgcacacagcaacaa 1634484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32463025 - 32463069
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  32463025 tctatccgatgtgggacatataactcacacttgtacacaacaaca 32463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 8327936 - 8327897
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  8327936 tatccgatgtgggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 15772886 - 15772843
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  15772886 tatccgatatgggacatataactcacacttgcacacgacaacaa 15772843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 29645028 - 29645071
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  29645028 tatccgatgtgggacatataacttacacttgcacacaacaacaa 29645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 39336353 - 39336392
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaa 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  39336353 tctatccgatgtgggacatataactcacacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 52634708 - 52634665
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  52634708 tatccgatgtgggacatataactcacacttgtacacaacaacaa 52634665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 53577396 - 53577353
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  53577396 tatccgatgtgtgacatataactcacacttgcacacaacaacaa 53577353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12114686 - 12114732
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaaa 47  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||    
T  12114686 tctatccgatgtgggatatataacttacacttgcacacaacaacaaa 12114732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 15773220 - 15773182
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  15773220 cgatgtgggacatataactcacacttgcacacaacaaca 15773182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 31190049 - 31190007
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  31190049 tatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 42342514 - 42342556
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  42342514 tatcggatgtgggacatataactcacacttgcacacaacaaca 42342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 43346682 - 43346640
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  43346682 tatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 45901745 - 45901703
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  45901745 tatccgatgtgggacatataactcacacttgtacacaacaaca 45901703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9240183 - 9240142
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  9240183 tctatccgatgtggaacatataactcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 29644708 - 29644749
Alignment:
Q  4 atccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  29644708 atccgatgtgggacatataactcacacttgcacacaaaaaca 29644749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 39914272 - 39914239
Alignment:
Q  15 gacatataactcacacttgcacacaacaacaaag 48  Q
    ||||||||||||||||||||||||||||||||||    
T  39914272 gacatataactcacacttgcacacaacaacaaag 39914239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 54017942 - 54017982
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  54017942 tatccgatgtaggacatataactcacacttgcacacaacaa 54017982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 33803378 - 33803417
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  33803378 tatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 35946554 - 35946515
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  35946554 tatccgatgtgggacatataactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 11661567 - 11661525
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||||||||||| ||||| |||||    
T  11661567 tatccgatgtgggacatataactcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 22304074 - 22304116
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| |||||||||||||||||||||| |||||||||||    
T  22304074 tatctgatgtgggacatataactcacacttgtacacaacaaca 22304116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 32462689 - 32462727
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  32462689 cgatgtgggacatataactcacacttgtacacaacaaca 32462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33809132 - 33809174
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||| ||| |||||||||||||| |||||||||||||||||    
T  33809132 tctatctgatgtgggacatataacttacacttgcacacaacaa 33809174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 37990765 - 37990807
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| |||||||||||||||||| |||||||||||    
T  37990765 tatccgatgtggaacatataactcacacttgtacacaacaaca 37990807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 43346917 - 43346959
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||| ||| |||||||||||||||||||||| |||||||||||    
T  43346917 tatctgatgtgggacatataactcacacttgtacacaacaaca 43346959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 53118100 - 53118142
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||    
T  53118100 tatccgatatggaacatataactcacacttgcccacaacaaca 53118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 3135596 - 3135629
Alignment:
Q  12 tgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||||||||||||||| |||||||||||    
T  3135596 tgggacatataactcacacttgtacacaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21832467 - 21832508
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    ||||||| || |||||||||||||||||||||||||| ||||    
T  21832467 tctatccaatgtgggacatataactcacacttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47964642 - 47964683
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    ||||||||||  |||||||| |||||||||||||||||||||    
T  47964642 tctatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49336811 - 49336856
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||||| || ||||| ||||||||||||| ||||||||||||    
T  49336811 tctatccgatgtgagacatgtaactcacacttgtacacaacaacaa 49336856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 22304278 - 22304246
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  22304278 tatccgatgtgggacatataactcacacttgca 22304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 50612578 - 50612610
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  50612578 tatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31468872 - 31468914
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  31468872 tatccgatgtgggacatataactcacacttgcacacaacaaca 31468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 36785689 - 36785731
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  36785689 tatccgatgtgggacatataactcacacttgcacacaacaaca 36785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 38796344 - 38796386
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  38796344 tatccgatgtgggacatataactcacacttgcacacaacaaca 38796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28531438 - 28531479
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  28531438 tctatccgatgtgggacatataactcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 38796746 - 38796791
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaaag 48  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  38796746 tatcagatgtgggacatataactcacacttgcacacaacaacaaag 38796791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 3673117 - 3673075
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  3673117 tatccaatgtgggacatataactcacacttgcacacaacaaca 3673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 16542481 - 16542439
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  16542481 tatccgatgtgggacttataactcacacttgcacacaacaaca 16542439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 29676935 - 29676893
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  29676935 tatccgatgtgggacatataactcacacctgcacacaacaaca 29676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 962632 - 962591
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  962632 tctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33954385 - 33954426
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  33954385 tctatctgatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 35580849 - 35580886
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaa 40  Q
    |||||||| |||||||||||||||||||||||||||||    
T  35580849 tatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36006003 - 36006048
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||    
T  36006003 tctattcgatgtgggacatataactcacacttgtacacaacaacaa 36006048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40679753 - 40679794
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  40679753 tctatccgatatgggacatataactcacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28254361 - 28254405
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||    
T  28254361 tctatccgatgtgggacatataagtcacactggcacacaacaaca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43443106 - 43443154
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaacaaagt 49  Q
    |||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  43443106 tctatctgatgtgggacatataacttacacttgcacacaacaataaagt 43443154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 3672747 - 3672708
Alignment:
Q  7 cgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  3672747 cgatgtgggacatataactcatacttgcacacaacaacaa 3672708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 37632723 - 37632762
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  37632723 tatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 6421336 - 6421294
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| |||||||||||||| ||||||| |||||||||||    
T  6421336 tatccgatgtgggacatataacttacacttgtacacaacaaca 6421294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 6421417 - 6421375
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||||||  ||||||||||    
T  6421417 tatccgatgtgggacatataactcacacttgtgcacaacaaca 6421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 15880295 - 15880253
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| |||||||||||||||||| |||||||||||    
T  15880295 tatccgatgtggaacatataactcacacttgtacacaacaaca 15880253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 16590911 - 16590881
Alignment:
Q  12 tgggacatataactcacacttgcacacaaca 42  Q
    |||||||||||||||||||||||||||||||    
T  16590911 tgggacatataactcacacttgcacacaaca 16590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30323498 - 30323456
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||    
T  30323498 tctatctgatttgggacatataacacacacttgcacacaacaa 30323456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31899552 - 31899594
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||    
T  31899552 tatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37895185 - 37895227
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| |||||||||||||||| ||| |||||||||||    
T  37895185 tctatccgatgtgggacatataactcaaactcgcacacaacaa 37895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33561575 - 33561616
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaaca 42  Q
    |||||| ||| ||| |||||||||||||||||||||||||||    
T  33561575 tctatctgatgtggaacatataactcacacttgcacacaaca 33561616  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 36178731 - 36178763
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  36178731 tatccgatgtgggacatataactcacacttgca 36178763  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 37106220 - 37106188
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  37106220 tatccgatgtgggacatataactcacacttgca 37106188  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 41283601 - 41283633
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  41283601 tatccgatatgggacatataactcacacttgca 41283633  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 43779838 - 43779810
Alignment:
Q  18 atataactcacacttgcacacaacaacaa 46  Q
    |||||||||||||||||||||||||||||    
T  43779838 atataactcacacttgcacacaacaacaa 43779810  T

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Target: scaffold0734 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 5428 - 5385
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  5428 tatccgatgtaggacatataactcacacttgcacacaacaacaa 5385  T

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Target: scaffold0734; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 5809 - 5767
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  5809 tatccgatgtgcgacatataactcacacttgcacacaacaaca 5767  T

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Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 3111 - 3153
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  3111 tatccgatgtgggacatataactcacacctgcacacaacaaca 3153  T

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Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 1232 - 1274
Alignment:
Q  3 tatccgatctgggacatataactcacacttgcacacaacaaca 45  Q
    ||||| || |||||||||||||||||||||| |||||||||||    
T  1232 tatccaatgtgggacatataactcacacttgtacacaacaaca 1274  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39872 - 39830
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  39872 tctatccgatgtgggacatataactcacacttgaacacaacaa 39830  T

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Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5391 - 5349
Alignment:
Q  1 tctatccgatctgggacatataactcacacttgcacacaacaa 43  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  5391 tctatccgatgtggaacatataactcacacttgcacacaacaa 5349  T

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Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 5012 - 4971
Alignment:
Q  5 tccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  5012 tccgatgtgagacatataattcacacttgcacacaacaacaa 4971  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 45
Target Start/End: Original strand, 17594 - 17624
Alignment:
Q  15 gacatataactcacacttgcacacaacaaca 45  Q
    |||||||||||||||||||||||||||||||    
T  17594 gacatataactcacacttgcacacaacaaca 17624  T

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Target: scaffold0702 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 268 - 300
Alignment:
Q  3 tatccgatctgggacatataactcacacttgca 35  Q
    |||||||| ||||||||||||||||||||||||    
T  268 tatccgatgtgggacatataactcacacttgca 300  T

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Target: scaffold0702; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 643 - 683
Alignment:
Q  6 ccgatctgggacatataactcacacttgcacacaacaacaa 46  Q
    ||||| ||||||||||||||||||||||  |||||||||||    
T  643 ccgatgtgggacatataactcacacttgtgcacaacaacaa 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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