View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14143_low_25 (Length: 241)
Name: NF14143_low_25
Description: NF14143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14143_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 45000392 - 45000166
Alignment:
| Q |
1 |
tgggaaactgcttcgttggggccatggcagattctgatacaacaatcaaagtaataacatcaaatggtggaatcatggaattcagtgcaccaataacagt |
100 |
Q |
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| T |
45000392 |
tgggaaactgcttcgttggggccatggcagattctgatacaacaatcaaagtaataacatcaaatggtggaatcatggaattcagtgcaccaataacagt |
45000293 |
T |
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| Q |
101 |
aagtttcatcaccaaagagttccctggacatgccatattcagaagtcatgatctcttttggaaaccactaagccaaatcgatgagttagaggcaggacaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
45000292 |
aagtttcatcaccaaagagttccctggacatgccatattcagaagccatgatctcttttggaaaccactaagccaattcgatgagttagaggcaggacaa |
45000193 |
T |
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| Q |
201 |
tcatactatttgcttccaatcaacaac |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
45000192 |
tcatactatttgcttccaatcaacaac |
45000166 |
T |
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