View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14143_low_26 (Length: 238)
Name: NF14143_low_26
Description: NF14143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14143_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 41735984 - 41735771
Alignment:
| Q |
8 |
ccaagaatatctgaagactcataataattctcacaaaaagagtcatgatcacaagcctaatcacaatagtaataacaattatgttcctcatgttattaat |
107 |
Q |
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| T |
41735984 |
ccaagaaaatctgaagactcataataattctcacaaaaagagttatgatcacaagcctaatcacaatagtaataacaattatgttcctcatgttattaat |
41735885 |
T |
|
| Q |
108 |
ctcacctgcaaaagaaaattagttatgtttgtggtaatccatatcatcatgcacctcccagctcccattccaaacaatttataattaaccacatcaatag |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735884 |
ctcacctgcaaaagaaaattagttatgtttgtggtaatccatatcatcatgcacctcccagctcccattccaaacaatttataattaaccacatcaatag |
41735785 |
T |
|
| Q |
208 |
tgtcacctcattca |
221 |
Q |
| |
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|||||||||||||| |
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| T |
41735784 |
tgtcacctcattca |
41735771 |
T |
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