View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14144_high_4 (Length: 394)

Name: NF14144_high_4
Description: NF14144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14144_high_4
NF14144_high_4
[»] chr4 (10 HSPs)
chr4 (17-291)||(19469471-19469744)
chr4 (289-376)||(19469323-19469410)
chr4 (38-256)||(45068143-45068362)
chr4 (49-242)||(50655104-50655297)
chr4 (12-95)||(4866798-4866881)
chr4 (27-124)||(23012348-23012445)
chr4 (28-124)||(30251406-30251502)
chr4 (53-124)||(24065133-24065204)
chr4 (27-187)||(44616668-44616832)
chr4 (53-227)||(48309656-48309830)
[»] chr5 (5 HSPs)
chr5 (38-184)||(27639467-27639613)
chr5 (38-116)||(41650523-41650601)
chr5 (133-227)||(16154554-16154648)
chr5 (27-188)||(3465310-3465471)
chr5 (28-90)||(33861945-33862007)
[»] chr6 (3 HSPs)
chr6 (12-248)||(9557361-9557598)
chr6 (45-227)||(51879-52063)
chr6 (53-95)||(9755698-9755740)
[»] chr3 (7 HSPs)
chr3 (29-124)||(26982040-26982135)
chr3 (41-251)||(34213011-34213221)
chr3 (50-124)||(1045402-1045476)
chr3 (67-188)||(1762039-1762160)
chr3 (55-124)||(4778022-4778091)
chr3 (56-95)||(2833336-2833375)
chr3 (53-95)||(41640843-41640885)
[»] chr7 (7 HSPs)
chr7 (54-184)||(46028474-46028604)
chr7 (38-115)||(40188205-40188282)
chr7 (14-124)||(23176896-23177006)
chr7 (53-253)||(26557857-26558058)
chr7 (55-95)||(33743491-33743531)
chr7 (59-113)||(12258376-12258430)
chr7 (53-95)||(33888635-33888677)
[»] chr8 (6 HSPs)
chr8 (63-243)||(41926890-41927071)
chr8 (27-124)||(34152026-34152123)
chr8 (57-115)||(42032732-42032790)
chr8 (14-123)||(24604828-24604937)
chr8 (27-184)||(42241236-42241392)
chr8 (40-124)||(7656821-7656905)
[»] chr2 (4 HSPs)
chr2 (17-113)||(43411515-43411611)
chr2 (53-114)||(10994432-10994493)
chr2 (27-95)||(41074570-41074637)
chr2 (57-245)||(29682570-29682758)
[»] chr1 (9 HSPs)
chr1 (27-137)||(52372647-52372757)
chr1 (53-253)||(51871063-51871264)
chr1 (17-113)||(13297595-13297691)
chr1 (28-124)||(21926609-21926704)
chr1 (29-124)||(9644361-9644456)
chr1 (27-124)||(40799641-40799738)
chr1 (27-124)||(44503962-44504059)
chr1 (53-95)||(25410606-25410648)
chr1 (55-95)||(3227685-3227725)
[»] scaffold0329 (1 HSPs)
scaffold0329 (27-119)||(18433-18525)
[»] scaffold0042 (1 HSPs)
scaffold0042 (45-95)||(83243-83293)


Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 19469744 - 19469471
Alignment:
Q  17 aggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacat 116  Q
    |||||||||  ||||| ||| |||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19469744 aggacaggctacacctcccactcatgataagtgcaggaactagcaga-cacttaactaggaaccacttccaagctaagaactttgctctatccaccacat 19469646  T
Q  117 gctcctcagaatgggcgccactagcaaataaaatgtcatttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaac 216  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19469645 gctcctcagaatgggcgccaccagcaaataaaatgtcattccaggaagttcagatggtccaaataacaacatacaaaataagaatcagacctgacctaac 19469546  T
Q  217 tctcttcccccacctaagctcgtaaaggcctggaactactgagcaaggctaaggggggaacaaacacccaaccca 291  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| | || ||||||||||||||||||||||    
T  19469545 tctcttcccccacctaagcccgtaaaggcctggaactgctgagcaagaccaaagggggaacaaacacccaaccca 19469471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 19469410 - 19469323
Alignment:
Q  289 ccaaggactctgacggcgcataacaaaagccacgccctagcccttgttaggtttgttcaagaaaatgtattactataacttttagaga 376  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19469410 ccaaggactctgacggtgcataacaaaagccacaccccagcccttgttaggtttgttcaagaaaatgtattactataacttttagaga 19469323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 256
Target Start/End: Original strand, 45068143 - 45068362
Alignment:
Q  38 tcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccac 137  Q
    |||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||  | | | || ||    
T  45068143 tcatgataagtgtaggaactgccagggcacttagccaggaaccacttccaagctaagagtttagctctatccactacaggctcctcatgaagagtgcaac 45068242  T
Q  138 tagcaaataaaatgtcatttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctctt-cccccacctaagct 236  Q
    ||| ||| |||| ||| ||   ||| ||||||||| ||||||||| |||||   ||| ||||| || |||| |||| |||||||| ||||||||||| |     
T  45068243 tagaaaacaaaaggtcgttcagggacgtccagatgttccaaataaaaacatgtcaaacaagaagcaaacctaacctcactctcttccccccacctaaacc 45068342  T
Q  237 cgtaaaggcctggaactact 256  Q
    |||||| | | |||||||||    
T  45068343 cgtaaaagacaggaactact 45068362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 242
Target Start/End: Original strand, 50655104 - 50655297
Alignment:
Q  49 gcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaa 148  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  || ||   ||||| ||||  ||||||     ||||||||| || ||| | |    
T  50655104 gcaagaactagcaggacacttagccaggaaccacttccaagctaagagtttagcctgatccatcacagactcctctctgagggcgccaccagaaaagata 50655203  T
Q  149 atgtcatttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctcttcccccacctaagctcgtaaa 242  Q
    | |||||| | ||| ||||||||||||||||||||| ||| | |||  || | || |||| |||||||||||||||||| ||||||| ||||||    
T  50655204 aggtcattacgggacgtccagatggtccaaataacagcatgccaaaccaggagcaaacctaacctaactctcttccccctcctaagcccgtaaa 50655297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 4866881 - 4866798
Alignment:
Q  12 agcataggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    |||| ||||||||  |||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  4866881 agcacaggacaggttgcacctcccactcatgataagtgcaaggactagcaaggcacttagccaggaaccacttccaagctaaga 4866798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 23012348 - 23012445
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||| ||||||||||||||||||  ||||||||   |||||||||| |||||| |||||| ||||||  ||  |||||||||||||  ||||||||    
T  23012348 gcacctcccattcatgataagtgcagaaactagcacaacacttagccatgaaccaattccaaactaagagtttcactctatccaccacgggctcctca 23012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 30251406 - 30251502
Alignment:
Q  28 caccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    ||||| ||| ||||||  || |||||||||  ||||||||||||||||||||||||| ||||| ||||  ||  ||||||||||||||  |||||||    
T  30251406 cacctcccactcatgaacagagcaagaacttccagggcacttagccaggaaccactttcaagccaagagtttcactctatccaccacagactcctca 30251502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 24065133 - 24065204
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||||||||| ||||||||| |||||||||||| | |||||  ||  |||||||||||||| ||||||||    
T  24065133 gaactagcagggtacttagccatgaaccacttccaggttaagagtttcactctatccaccacaggctcctca 24065204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 44616668 - 44616832
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcaga 126  Q
    |||||| ||| ||||  |||||||||||| ||||| ||| |||||||| || |||||| |||||||||| |||  |||||||| ||| | ||||||||      
T  44616668 gcacctcccactcatcgtaagtgcaagaattagcaaggcccttagccatgagccacttacaagctaagagcttctctctatccgccataggctcctcacg 44616767  T
Q  127 atgggcgccactagcaaataaaat----gtcatttcaggaagtccagatggtccaaataacaaca 187  Q
    | ||||||  | || ||| |||||    |||||| ||| | ||||||||| ||||||||||||||    
T  44616768 aagggcgcttccagaaaaaaaaataaaggtcattccagcacgtccagatgatccaaataacaaca 44616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 227
Target Start/End: Original strand, 48309656 - 48309830
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgt 152  Q
    |||||||||||  |||||||| ||||| |||||||||||||||  ||  |||||||||||||  |||||||     |   ||||| |||||| | || ||    
T  48309656 gaactagcaggaaacttagcccggaacgacttccaagctaagagtttcactctatccaccactggctcctctcggagtaagccaccagcaaagataaggt 48309755  T
Q  153 catttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctcttccccc 227  Q
    ||||   ||| |  || |||||||||||||||| || | ||| ||||| || |||| ||||||||||||||||||    
T  48309756 cattctgggatgctcaaatggtccaaataacaatatgccaaacaagaagcaaacctaacctaactctcttccccc 48309830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 27639467 - 27639613
Alignment:
Q  38 tcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccac 137  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||||  || ||||  ||||| |||||    
T  27639467 tcatgataagtgcaagaactagcaggacatttagccatgaaccacttccaagctaagaattttgctctatccaccacagtctgctcactatgggtgccac 27639566  T
Q  138 tagcaaataaaatgtcatttcaggaagtccagatggtccaaataaca 184  Q
     |||||| | || |||||||  | |||||||||||||||||||||||    
T  27639567 cagcaaacataaagtcatttatgtaagtccagatggtccaaataaca 27639613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 41650601 - 41650523
Alignment:
Q  38 tcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacat 116  Q
    ||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  41650601 tcatggtaagtgcaggagctagcagagcacttagccaggaaccacttccaagctaagagtttcgctctatccaccacat 41650523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 16154554 - 16154648
Alignment:
Q  133 gccactagcaaataaaatgtcatttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctcttccccc 227  Q
    ||||| |||||| | || ||||||| | || ||||| ||||||||||||| | ||| | ||||||||| || |||| ||||||||||||||||||    
T  16154554 gccaccagcaaagataaggtcattttaagacgtccaaatggtccaaataatagcatgccaaataagaagcaaacctaacctaactctcttccccc 16154648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 3465310 - 3465471
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcaga 126  Q
    |||||| ||| ||||| |||||||| ||||||| ||  | ||| |||| ||| ||||||||||||||||  || ||||||||||||| |  ||||||       
T  3465310 gcacctcccactcatggtaagtgcaggaactagtagaacgcttcgccaagaaacacttccaagctaagagtttcgctctatccaccaaagactcctctcg 3465409  T
Q  127 atgggcgccactagcaaataaaatgtcatttcaggaagtccagatggtccaaataacaacat 188  Q
    |  || ||||| || ||| | || ||| |||| ||| ||| |||||||||||||||||||||    
T  3465410 aaaggtgccaccagaaaaaataaggtcgtttctggatgtctagatggtccaaataacaacat 3465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 33862007 - 33861945
Alignment:
Q  28 caccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagc 90  Q
    ||||| ||| |||||| ||| ||| |||||| |||||||||||||| ||| ||||||||||||    
T  33862007 cacctcccactcatgaaaagagcaggaactaccagggcacttagccgggagccacttccaagc 33861945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 248
Target Start/End: Original strand, 9557361 - 9557598
Alignment:
Q  12 agcataggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccac 111  Q
    |||| ||||| ||| |||||| ||| |||||||||||||| || |||||||| ||||||| |||||| ||||||||||||||||| ||||| | ||||||    
T  9557361 agcaaaggacgggctgcacctcccactcatgataagtgcaggagctagcaggacacttagtcaggaatcacttccaagctaagaattttgccccatccac 9557460  T
Q  112 cacatgctcctcagaatgggcgccactagcaaataaaatgtcatttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgac 211  Q
    |||   |   ||| |||||| ||||| |||| | | || |||||||| ||| ||| ||||||||||||||||||||| | ||| ||||| || || | ||    
T  9557461 caccgacctatcacaatgggtgccaccagcagaaataaggtcatttcgggacgtcaagatggtccaaataacaacatgcaaaacaagaaccaaacataac 9557560  T
Q  212 ctaactctcttc-ccccacctaagctcgtaaaggcctg 248  Q
    ||||||||||||  |||||||||||  |||||| ||||    
T  9557561 ctaactctcttcttcccacctaagcctgtaaagccctg 9557598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 227
Target Start/End: Complemental strand, 52063 - 51879
Alignment:
Q  45 aagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaa 144  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||  || |||| |||||||| | |||||||     ||| ||||| || |||    
T  52063 aagtgcaagaactagcaagacacttagccaggaaccacttccaagctaagagtttagctcgatccaccataggctcctctctgagggagccaccagaaaa 51964  T
Q  145 taaaatgtcatttcaggaagtccagatggtccaaataacaacata--cgaaataagaatcagacctgacctaactctcttccccc 227  Q
     | || |||||| | ||| ||||||||||||||||||||| ||||  | |||| || | ||||| | ||||||||||||||||||    
T  51963 gataaggtcattacgggacgtccagatggtccaaataacagcatatgccaaatcaggagcagacttaacctaactctcttccccc 51879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 9755698 - 9755740
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    ||||||||||||||||||||| | |||||||||||| ||||||    
T  9755698 gaactagcagggcacttagcccgaaaccacttccaaactaaga 9755740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 26982040 - 26982135
Alignment:
Q  29 accttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||| ||| |||||||| ||||| ||||| |||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||| ||||||||    
T  26982040 acctcccactcatgataggtgcaggaacttgcagggcacttagccaagaaccacttccaagctaagagttttactctatccaccacaggctcctca 26982135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 251
Target Start/End: Complemental strand, 34213221 - 34213011
Alignment:
Q  41 tgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactag 140  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||  ||  |||||||||| ||| | ||||||    | ||||||| ||    
T  34213221 tgataagtgcatgaactagcatggcacttagccatgaaccacttccaagctaagagtttcactctatccacaacaggttcctcacggagagcgccaccag 34213122  T
Q  141 caaataaaatgtcatttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctcttcccccacctaagctcgta 240  Q
      || | || ||| |||  ||| ||||| |||||||| |||||| |||   |||  ||||  |||||| | |||||||| ||||||| ||||||||||||    
T  34213121 agaaaataaggtcgttttgggacgtccaaatggtccatataacatcatggcaaactagaaatagacctaatctaactctgttccccctcctaagctcgta 34213022  T
Q  241 aaggcctggaa 251  Q
    ||||| |||||    
T  34213021 aaggcgtggaa 34213011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 1045402 - 1045476
Alignment:
Q  50 caagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  ||  | |||||||||||  ||||||||    
T  1045402 caagaactagcagggcacttagccaggaaccacttccaagctgagagtttaaccctatccaccactggctcctca 1045476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 1762039 - 1762160
Alignment:
Q  67 cttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgtcatttcaggaagtc 166  Q
    |||||||| ||||||||||||||||||||  || |||||||| | || |||| |||||  |||| |||||| |  ||| | ||  ||||| ||||| |||    
T  1762039 cttagccatgaaccacttccaagctaagagtttcgctctatctatcaaatgcacctcactatggacgccaccaaaaaaaataagctcattccaggacgtc 1762138  T
Q  167 cagatggtccaaataacaacat 188  Q
    ||||||||||||||||||||||    
T  1762139 cagatggtccaaataacaacat 1762160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 4778091 - 4778022
Alignment:
Q  55 actagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    ||||||||||||| ||||| |||||||||||||| ||||||  ||  |||||||||||||| ||||||||    
T  4778091 actagcagggcacctagcctggaaccacttccaaactaagagtttaactctatccaccacaggctcctca 4778022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 2833336 - 2833375
Alignment:
Q  56 ctagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  2833336 ctagcagggcacttagccatgaaccacttccaagctaaga 2833375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 41640885 - 41640843
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    ||||||||||||||||||||| | ||||||||||||| |||||    
T  41640885 gaactagcagggcacttagcccgaaaccacttccaagttaaga 41640843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 46028474 - 46028604
Alignment:
Q  54 aactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgtc 153  Q
    |||||||||| |||||||||||||||||||||||||||||||  || |||||||||||||||  | |||||  |||||| |||  || ||| | || |||    
T  46028474 aactagcaggacacttagccaggaaccacttccaagctaagagtttcgctctatccaccacagacccctcactatgggcaccatcagaaaaaacaaggtc 46028573  T
Q  154 atttcaggaagtccagatggtccaaataaca 184  Q
    ||| | |||||| ||||||||||||||||||    
T  46028574 attccgggaagttcagatggtccaaataaca 46028604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 40188205 - 40188282
Alignment:
Q  38 tcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccaca 115  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||  |||||| |||||||||||    
T  40188205 tcatgataagtgcaagaactagcagggcacttaggcaagaaccacttccaagctatgagttttgctttatccaccaca 40188282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 23176896 - 23177006
Alignment:
Q  14 cataggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccacca 113  Q
    |||||||| ||| |||||| | | |||||||||||||| ||||||||| | ||||| || ||||||| ||||||||||||||  ||  |||||| |||||    
T  23176896 cataggacgggctgcacctccaactcatgataagtgcatgaactagcatgacacttggcaaggaaccgcttccaagctaagagtttcactctatacacca 23176995  T
Q  114 catgctcctca 124  Q
    || ||||||||    
T  23176996 caggctcctca 23177006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 253
Target Start/End: Original strand, 26557857 - 26558058
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgt 152  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |  ||  |||| ||||||||| ||||||||    |   ||||| |||||| | |  ||    
T  26557857 gaactagcagggcacttagccaggagccactaccaagctaaaagtttaactctgtccaccacaggctcctcacggagtaagccaccagcaaagatacggt 26557956  T
Q  153 catttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactct-cttcccccacctaagctcgtaaaggcctggaa 251  Q
    | ||  |||| | ||| ||||||||||||||||||| | ||| ||||| || |||| |||||||||| || ||||| ||||| | |||||||||||| ||    
T  26557957 cgttctaggatgcccaaatggtccaaataacaacatgccaaacaagaagcaaacctaacctaactctcctcccccctcctaaacccgtaaaggcctgaaa 26558056  T
Q  252 ct 253  Q
    ||    
T  26558057 ct 26558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 33743531 - 33743491
Alignment:
Q  55 actagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  33743531 actagcagggcacttagccaagaaccactttcaagctaaga 33743491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 12258430 - 12258376
Alignment:
Q  59 gcagggcacttagccaggaaccacttccaagctaagaactttgctctatccacca 113  Q
    ||||| |||||||||||||||||||| ||||||||||  ||  ||||||||||||    
T  12258430 gcaggacacttagccaggaaccactttcaagctaagagtttaactctatccacca 12258376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 33888677 - 33888635
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    ||||||||||||||||||||| | |||||||||||| ||||||    
T  33888677 gaactagcagggcacttagcccgaaaccacttccaatctaaga 33888635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 7e-22; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 41927071 - 41926890
Alignment:
Q  63 ggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgtcatttcagga 162  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||||| |||||||   | | || |||| || ||| | ||  ||||| |  ||    
T  41927071 ggcacttagccaggaaccacttccaagctaagagattcgctctatccaccacaggctcctctcgaagagcaccaccagaaaaaataagatcattccgaga 41926972  T
Q  163 agtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctcttccc-ccacctaagctcgtaaag 243  Q
    |||||| ||||||||||||||| ||| | |||  |||| ||||||| ||||| ||||| |||| |||||||||| |||||||    
T  41926971 agtccaaatggtccaaataacagcatgccaaaccagaagcagacctaacctagctctcctcccaccacctaagcccgtaaag 41926890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 34152026 - 34152123
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||| ||| |||||| ||||||| |||||   ||||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||    
T  34152026 gcacctcccactcatgaaaagtgcaggaactgctagggcgcttagccaggaaccacttccaagctaagagtttagctctatccacaacaggctcctca 34152123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 42032790 - 42032732
Alignment:
Q  57 tagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccaca 115  Q
    |||||||||||||||||||||||||||||||||||||||  || ||||||| |||||||    
T  42032790 tagcagggcacttagccaggaaccacttccaagctaagagtttcgctctattcaccaca 42032732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 24604937 - 24604828
Alignment:
Q  14 cataggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccacca 113  Q
    |||||||  ||| |||||| ||| |||||||||| | || |||||||||| |||||||||| ||||||||| ||| ||||||  || |||||||||||||    
T  24604937 cataggatgggctgcacctcccactcatgataagagaaaaaactagcaggccacttagccaagaaccactttcaatctaagagtttcgctctatccacca 24604838  T
Q  114 catgctcctc 123  Q
    |  |||||||    
T  24604837 ccagctcctc 24604828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 42241236 - 42241392
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcaga 126  Q
    |||||| ||| ||| | |||||||| ||||||| || || ||| |||||||||||||||||||||||||  || ||| ||||||||| | ||||||||      
T  42241236 gcacctcccactcaaggtaagtgcaggaactagtagagcgcttcgccaggaaccacttccaagctaagagtttcgctttatccaccaaaggctcctcacg 42241335  T
Q  127 atgggcgccactagcaaataaaatgtcatttcaggaagtccagatggtccaaataaca 184  Q
      ||||||||| || ||| | || ||| |||| ||| ||||||||||| |||||||||    
T  42241336 gagggcgccaccag-aaaaataaggtcgtttctggatgtccagatggttcaaataaca 42241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 7656821 - 7656905
Alignment:
Q  40 atgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||||||||||||| ||| ||| |||||||  |||||||||||||||  |||||  ||  |||||||||||||| ||||||||    
T  7656821 atgataagtgcaagaattagtaggacacttagttaggaaccacttccaaattaagagtttcactctatccaccacaggctcctca 7656905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 43411611 - 43411515
Alignment:
Q  17 aggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccacca 113  Q
    ||||| ||| |||||| ||| |||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||||  || |||||||||||||    
T  43411611 aggacgggctgcacctcccactcatgataagtgcaggagctagcaggacacttagccaggaaacactttcaagctaagagtttcgctctatccacca 43411515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 10994493 - 10994432
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||    
T  10994493 gaactagcagggcacttagccaggaaccacttccaagctaagagtttaactctatccaccac 10994432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 41074570 - 41074637
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  41074570 gcaccttccactcatgaaaagtg-aaggactagcagggcacttagccaggaaccactttcaagctaaga 41074637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 245
Target Start/End: Complemental strand, 29682758 - 29682570
Alignment:
Q  57 tagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgtcatt 156  Q
    ||||||||  ||||||| ||||||||||| |||||||||  ||  |||||||||||||  |||| ||     | || |||| |||||| | || ||||||    
T  29682758 tagcagggtgcttagcctggaaccacttctaagctaagagtttaactctatccaccactagctcatctcggagagcaccaccagcaaagataaggtcatt 29682659  T
Q  157 tcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctcttcccccacctaagctcgtaaaggc 245  Q
     | ||| | ||| ||||||||||||||||||| | ||| ||||| || |||| ||||||||||| |||||| || || | |||||||||    
T  29682658 ccgggacgcccaaatggtccaaataacaacatgccaaacaagaagcaaacctaacctaactctcctccccctcccaaccccgtaaaggc 29682570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 52372757 - 52372647
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcaga 126  Q
    |||||| ||| |||| | ||| ||| ||||||||||||||| ||||||||||||||||| |||||||||  || |||||||||||||||  | |||||      
T  52372757 gcacctcccactcataaaaagagcaggaactagcagggcacctagccaggaaccacttctaagctaagagtttcgctctatccaccacagacccctcact 52372658  T
Q  127 atgggcgccac 137  Q
    |||||||||||    
T  52372657 atgggcgccac 52372647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 51871264 - 51871063
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctcagaatgggcgccactagcaaataaaatgt 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||  ||   ||||||||||||  ||||||||    |  | |||  | |||| | || ||    
T  51871264 gaactagcagggcacttagtcaggaaccacttccaagctaagagtttaattctatccaccactggctcctcacggagaacaccaacaacaaagataaggt 51871165  T
Q  153 catttcaggaagtccagatggtccaaataacaacatacgaaataagaatcagacctgacctaactctc-ttcccccacctaagctcgtaaaggcctggaa 251  Q
    |||||| ||  ||||| |||||||| |||||| ||| | ||| ||||| || |||| ||||||||||| | ||||||||||| | |||||||||||| ||    
T  51871164 catttcgggtcgtccaaatggtccagataacagcatgccaaacaagaagcaaacctaacctaactctcgtccccccacctaaacccgtaaaggcctgaaa 51871065  T
Q  252 ct 253  Q
    ||    
T  51871064 ct 51871063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 13297691 - 13297595
Alignment:
Q  17 aggacaggccgcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccacca 113  Q
    |||| |||| |||||| ||| |||||||||||||| ||||||||||| |||||||||| |||||| || ||||||||||  ||  ||||||||||||    
T  13297691 aggagaggctgcacctcccactcatgataagtgcaggaactagcaggacacttagccatgaaccaatttcaagctaagagtttcactctatccacca 13297595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 21926704 - 21926609
Alignment:
Q  28 caccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    ||||| ||| ||||||||||  || |||||||||||||||||||||| |||||||||||| |||||||  ||  ||||||||||||||  |||||||    
T  21926704 cacctcccactcatgataagaacatgaactagcagggcacttagcca-gaaccacttccaggctaagagtttcactctatccaccacagactcctca 21926609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 9644456 - 9644361
Alignment:
Q  29 accttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||| |||||||||| | | ||||||||||| ||| |||||||| ||||||||||||||| | ||||  || ||||||||||||| | ||||||||    
T  9644456 acctcccattcatgaaaggagcaagaactagtaggacacttagctaggaaccacttccaacccaagagtttcgctctatccaccataggctcctca 9644361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 40799738 - 40799641
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||| ||| |||||| ||| |||||||||||||  ||||||||| |||||| |||| ||||| ||||  ||  |||||||||||||| ||||||||    
T  40799738 gcacctcccactcatgaaaagagcaagaactagcaatgcacttagctaggaacaactttcaagccaagagtttcactctatccaccacaggctcctca 40799641  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 44503962 - 44504059
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgctcctca 124  Q
    |||||| ||| |||||| ||| ||| |||||| || | ||||||| || |||||||||||||||||||| |||  || ||||||||||| ||||||||    
T  44503962 gcacctcccactcatgaaaagagcaggaactaccacgacacttagtcatgaaccacttccaagctaagagcttcactttatccaccacaggctcctca 44504059  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 25410606 - 25410648
Alignment:
Q  53 gaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  25410606 gaactagcaaggtacttagccaggaaccacttccaagctaaga 25410648  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 3227685 - 3227725
Alignment:
Q  55 actagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    |||||||||||||||| ||||||| ||||| ||||||||||    
T  3227685 actagcagggcacttaaccaggaatcactttcaagctaaga 3227725  T

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Target: scaffold0329 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 18433 - 18525
Alignment:
Q  27 gcaccttccattcatgataagtgcaagaactagcagggcacttagccaggaaccacttccaagctaagaactttgctctatccaccacatgct 119  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||||  ||| ||||| ||| ||| ||  || |||||||||||||||||||    
T  18433 gcacctcccactcatgataagtgcaggaactagcagggcacttagcccagaatcactttcaaactatgagtttcgctctatccaccacatgct 18525  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 83243 - 83293
Alignment:
Q  45 aagtgcaagaactagcagggcacttagccaggaaccacttccaagctaaga 95  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||    
T  83243 aagtgcaagaactagcaggacacttcggcatgaaccacttccaagctaaga 83293  T

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