View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14145_high_1 (Length: 989)
Name: NF14145_high_1
Description: NF14145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14145_high_1 |
 | |
|
| [»] scaffold0425 (3 HSPs) |
| | |
|
| [»] scaffold0958 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 852; Significance: 0; HSPs: 42)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 852; E-Value: 0
Query Start/End: Original strand, 15 - 975
Target Start/End: Original strand, 6838620 - 6839586
Alignment:
| Q |
15 |
aatattaacaggcaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatct |
114 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6838620 |
aatattaacagccaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatct |
6838719 |
T |
|
| Q |
115 |
tctacgagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgaca |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6838720 |
tctacgagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgaca |
6838819 |
T |
|
| Q |
215 |
gttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6838820 |
gttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagg |
6838919 |
T |
|
| Q |
315 |
gttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagct |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6838920 |
gttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagct |
6839019 |
T |
|
| Q |
415 |
gat------ggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttc |
508 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6839020 |
gatggtgatggtgatagtaacattaactcggctttgagattgagttaccataacctcccttccagtttgaaacgctgttttgcctactgttctgtatttc |
6839119 |
T |
|
| Q |
509 |
ctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattggg |
608 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
6839120 |
ctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatactgcggaagagacaaaagtgaagaagaattggg |
6839219 |
T |
|
| Q |
609 |
aaatgaattcttggattatctagagtccatttcatttttcgaacaattaaactatgatggtcatacaagatttctcatgcatgatcttgttaatgatttg |
708 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6839220 |
aaatgaattcatggattacctagagtccatttcatttttcgaacaattaaactatgatggtcgtacaagatttctcatgcatgatcttgttaatgatttg |
6839319 |
T |
|
| Q |
709 |
gcaaaatctgagtcccaagagttttgcttacaaattgagagtgttaatctgcaagatataactgaaagaacacgtcacattcggtgcaatattgatttgg |
808 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
6839320 |
gcaaaatctgagtcccaagagttttgcttacaaattgagagtgataatctgcaagatataactgaaagaacacgtcacattcggtgcaatcttgatttca |
6839419 |
T |
|
| Q |
809 |
aagatggtgagcgaatattaaaacacatttataagtttaaggggttacgcagcctgttggtagtacgacgaggctatgataaaatacgcttcatgataag |
908 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| | || ||||||||||||||| |
|
|
| T |
6839420 |
aagatggtgagcaaatattaaagcacatttataagtttaaggggttacgcagcctgttggtagtacgaccaaagtatggtcaagaacgcttcatgataag |
6839519 |
T |
|
| Q |
909 |
caacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtcattctgttattgt |
975 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6839520 |
caacaatgtgcaacgtgatctgttttcaaaactaaaatatcttcggatgttgtcattctgttattgt |
6839586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 563; E-Value: 0
Query Start/End: Original strand, 15 - 968
Target Start/End: Complemental strand, 8471871 - 8470921
Alignment:
| Q |
15 |
aatattaacaggcaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatct |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
8471871 |
aatattaatgggcaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagaagttactacttccctttaaccatggatct |
8471772 |
T |
|
| Q |
115 |
tctacgagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgaca |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8471771 |
tctacgagtaagattattgtgacaacacgcgacaaagaggtagcattaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgact |
8471672 |
T |
|
| Q |
215 |
gttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagg |
314 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8471671 |
gttggagtttattttccagtcttgcttttcctggcaaaaaattgagcgaatacccaaatcttgaatcaattggcaaaaatattgtagataagtgtggagg |
8471572 |
T |
|
| Q |
315 |
gttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagct |
414 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
8471571 |
gctgcctttagctgtgaaaacattgggaaaccttttgcggaaaaaatattctcaacacgaatgggataagatactagaggctgacatgtggcggttagct |
8471472 |
T |
|
| Q |
415 |
gatggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggg |
514 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| | | |||| ||||||||||||||||||||| ||||||||| || |
|
|
| T |
8471471 |
gatggtgacagtaacattaactcggcattgagattgagttaccataacctcccttctaatctgaagcgctgttttgcctactgctctatatttcctaagg |
8471372 |
T |
|
| Q |
515 |
gttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatga |
614 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
8471371 |
gttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgttgcagaagagacaaaagtgaggaagagttgggtaatga |
8471272 |
T |
|
| Q |
615 |
attcttggattatctagagtccatttcatttttcgaacaattaaactatgatggtcatacaagatttctcatgcatgatcttgttaatgatttggcaaaa |
714 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||| || |||||| |||| || | ||||| || | |||||||||||||||| ||||||||||||||| |
|
|
| T |
8471271 |
attctttgatgatcttgagtccatttcatttctccaacaat--cacta-gaagatcataagagtatagtcatgcatgatcttgtcaatgatttggcaaaa |
8471175 |
T |
|
| Q |
715 |
tctgagtcccaagagttttgcttacaaattgagagtgttaatctgcaagatataactgaaagaacacgtcacattcggtgcaatattgatttggaagatg |
814 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| ||| || | ||||||||||| |||||||||||||||||||| | || || |||||||| |||||| |
|
|
| T |
8471174 |
tcagagtcccaagagttttgcttacaaattgagggtgatagtgtgcaagatatatctgaaagaacacgtcacatttgctgttatcttgatttgaaagatg |
8471075 |
T |
|
| Q |
815 |
gtgagcgaatattaaaacacatttataagtttaaggggttacgcagcctgttggtagtacgacgaggctatgataaaatacgcttcatgataagcaacaa |
914 |
Q |
| |
|
||| |||||||||| || ||||||||| | |||||||||||||||||| |||||| | ||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
8471074 |
gtgctagaatattaaagcagatttataagataaaggggttacgcagcctgctggtagaatcacgaggctatggtaaagactgcttcatgatagacaacaa |
8470975 |
T |
|
| Q |
915 |
tgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtcattctg |
968 |
Q |
| |
|
| |||||||| || | |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8470974 |
tttgcaacgtaatatattttcaaaactaaaatatttgcggatgttgtcattctg |
8470921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 276 - 969
Target Start/End: Complemental strand, 7587921 - 7587225
Alignment:
| Q |
276 |
tgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaa |
375 |
Q |
| |
|
|||||| |||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||| ||| | |||||| ||| || |||| |
|
|
| T |
7587921 |
tgaatcgattggcaagaagattgtagagaaatgtggagggttgcctctagctgtgaaaacattggggaaactcctgcaaagaaaattttctcaagctgaa |
7587822 |
T |
|
| Q |
376 |
tgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtt |
475 |
Q |
| |
|
||| |||||| | ||| | || ||||||| || | | |||| | | | |||||||| | |||||||||||||||||||| ||| | || | | |
|
|
| T |
7587821 |
tggtttaagatattggagacagatatgtggcatgtatcgaagggtggtgatgaaattaactcagtattgagattgagttaccataatctcccatccaatc |
7587722 |
T |
|
| Q |
476 |
tgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatg |
575 |
Q |
| |
|
| || || |||||||||| || || ||||||| | ||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7587721 |
taaagcgttgttttgccttttgttcaatatttcccaagggttatgtatttgaaaaagatgaattgatcaagctttggatggcagaaggtttgctgaaatg |
7587622 |
T |
|
| Q |
576 |
ctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttcatttttcgaaca---attaaactatgatggtcat |
672 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||| | || | ||| |||| || |
|
|
| T |
7587621 |
ttgcggaagagacaaaagtgaagaagagttgggtaatgaattcttggatgatctagagtccatttcattttttcaacaaccactagattattttggtgat |
7587522 |
T |
|
| Q |
673 |
acaagatttctcatgcatgatcttgttaatgatttggcaaaatctgagtcccaagagttttgcttacaaattgagagtgttaatctgcaagatataactg |
772 |
Q |
| |
|
| ||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| || ||| ||| | ||||||| |
|
|
| T |
7587521 |
aagagattattcatgcatgatcttgtcaatgatttggcaaaatcagagtcccatgagttttgcttacaaattgagggtgatagtcttcaatacataactg |
7587422 |
T |
|
| Q |
773 |
aaagaacacgtcacattcggtgcaatattgatttggaagatggtgagcgaatattaaaacacatttataagtttaaggggttacgcagcctgttggtagt |
872 |
Q |
| |
|
||||||||||||||||| | ||| || ||||| || |||| ||||| || |||| || ||||||| || ||| ||||| |||||||| | |||| ||| |
|
|
| T |
7587421 |
aaagaacacgtcacatttgttgcgatcttgatgtgaaagaatgtgagagattattgaatcacatttctatgttcaagggattacgcagttttttggcagt |
7587322 |
T |
|
| Q |
873 |
acgacgaggctatgataaaatacgcttcatgataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtcattctgt |
969 |
Q |
| |
|
|| | |||||||| |||| ||||||| |||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
7587321 |
accaggaggctatcgtaaagactatttcatgacaagcaacaatttgcaacgtgatctattttcgaaactaaaatatttgcggatgttgtcattctgt |
7587225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 16 - 975
Target Start/End: Original strand, 8568668 - 8569636
Alignment:
| Q |
16 |
atattaacaggcaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatctt |
115 |
Q |
| |
|
|||||||||||||| || | | | |||||| | |||||| ||||||| |||||||||| ||||||| |||||||||||| ||||| || ||||||| |
|
|
| T |
8568668 |
atattaacaggcaaaaagtttttgcttgttctagatgatatctggaatgggaatgaggaattttgggagcagttactacttccatttaatcatggatctt |
8568767 |
T |
|
| Q |
116 |
ctacgagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgacag |
215 |
Q |
| |
|
| ||||||||||||||||||||||| || || |||| |||| | | |||||||| || | || |||| || ||||||||| ||| || | |
|
|
| T |
8568768 |
caggaagtaagattattgtgacaacacgtgacaagcatgttgcattagtcatgaaatctgagcagcaacttcatttaaagcaattggaggagaaagattg |
8568867 |
T |
|
| Q |
216 |
ttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggaggg |
315 |
Q |
| |
|
||||||||||||| | || ||||||||| || || |||| ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||||| |
|
|
| T |
8568868 |
ttggagtttatttgtgaaacatgcttttcaaggaaagaatgtgtttgaatatccaaatcttgaatcgattggaaagaagattgtagaaaagtgtggaggg |
8568967 |
T |
|
| Q |
316 |
ttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctg |
415 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| | |||||| ||| || ||||||| || ||| | ||| |||| ||||||| ||| | |
|
|
| T |
8568968 |
ttgcctttagctgtgaaaacattggggaatctcttgcaaagaaaattttctcaaggtgaatggtctaacatattggagactgatatgtggcatttatcga |
8569067 |
T |
|
| Q |
416 |
atggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctagggg |
515 |
Q |
| |
|
| ||||| | | |||||| | | |||||||||||||||||||| ||| |||| | | | || || ||||||||||| || || | ||||| | ||| |
|
|
| T |
8569068 |
agggtgacgatgaaattaacccagtattgagattgagttaccataatctcccttccaatctcaagcgttgttttgcctattgttcaatttttcccaaggg |
8569167 |
T |
|
| Q |
516 |
ttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaa |
615 |
Q |
| |
|
|| ||| ||||| | |||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
8569168 |
ttatgaatttgaaaaagatgaattgatcaagctttggatggcagaaggtttgttgaagtgttgcaaaagagacaaaagtgaagaagagctgggtaatgag |
8569267 |
T |
|
| Q |
616 |
ttcttggattatctagagtccatttcatttttcgaacaat---taaa--ctatg-atggtcatacaagatttctcatgcatgatcttgttaatgatttgg |
709 |
Q |
| |
|
||||| ||| |||| |||||||||||||||||| | |||| |||| | || || ||| ||| | | | | ||||||||||||||||||||||||| |
|
|
| T |
8569268 |
ttcttcgatgatctggagtccatttcatttttccagcaatcgataaatccactgtatagtcgtaccatactggtaatgcatgatcttgttaatgatttgg |
8569367 |
T |
|
| Q |
710 |
caaaatctgagtcccaagagttttgcttacaaattgagagtgttaatctgcaagatataactgaaagaacacgtcacattcggt---gcaatattgattt |
806 |
Q |
| |
|
||||||| || || | ||| |||||||||||||||||| ||| || |||||||||||| ||||||| |||||||| ||| ||| || | ||||||| |
|
|
| T |
8569368 |
caaaatcagaatctcgagaattttgcttacaaattgagggtgataggctgcaagatatatctgaaaggacacgtcatatttggtgtggctctcttgattt |
8569467 |
T |
|
| Q |
807 |
ggaagatggtgagcgaatattaaaacacatttataagtttaaggggttacgcagcctgttggtagtacgacgaggctatgataaaatacgcttcatgata |
906 |
Q |
| |
|
| ||||||||| ||||||||| |||||||||||| ||||||| |||||| | || |||||| | || ||||||| || | | |||| | |||| |
|
|
| T |
8569468 |
gaaagatggtgcaagaatattaaggcacatttataagattaagggattacgcggtctactggtagaagcacaaggctattatgacgaatgcttgaagata |
8569567 |
T |
|
| Q |
907 |
agcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtcattctgttattgt |
975 |
Q |
| |
|
||||||||||| |||| ||| | ||||||||||||||||| | |||||||| ||||| ||| ||||| |
|
|
| T |
8569568 |
agcaacaatgttcaacatgaaattttttcaaaactaaaatacttacggatgttatcattttgtgattgt |
8569636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 20 - 647
Target Start/End: Complemental strand, 5299036 - 5298409
Alignment:
| Q |
20 |
taacaggcaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatcttctac |
119 |
Q |
| |
|
||||||| ||||| ||||| |||||| |||||||||||||||| | || |||| |||||||| |||||||||||||||||| | |||||| | |
|
|
| T |
5299036 |
taacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccgg |
5298937 |
T |
|
| Q |
120 |
gagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgacagttgg |
219 |
Q |
| |
|
||||||||||||||||| ||||| || || | ||||||||| || |||| || || || | || ||||||| |||||| |||||||||| ||||| |
|
|
| T |
5298936 |
aagtaagattattgtgaccacacgtgacaaggaggtagcatcagttatgaagtccaccaaacttcttcatttgaagcaattgaagaagagtgaatgttgg |
5298837 |
T |
|
| Q |
220 |
agtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgc |
319 |
Q |
| |
|
||| | ||| | || ||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||| || || ||||| |||||||||||||||| |
|
|
| T |
5298836 |
agtatgtttgtgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgc |
5298737 |
T |
|
| Q |
320 |
ctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatgg |
419 |
Q |
| |
|
|| ||||||| ||| |||||||||| |||||||| | |||||||||| ||| |||||||| |||||| | ||| | || ||||| | ||| | || || |
|
|
| T |
5298736 |
ctctagctgtaaaagcattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgtggtgtttatcagaggg |
5298637 |
T |
|
| Q |
420 |
tgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggtttt |
519 |
Q |
| |
|
||| |||||||||||||| | |||||| ||||||| |||| | ||| |||| | | |||| || |||||| | || || || ||||||| || |||| | |
|
|
| T |
5298636 |
tgagagtaacattaactcagttttgaggttgagtttccatcatctcccttcaaatctgaagcgttgtttttcttattgttccatatttccaagaggttat |
5298537 |
T |
|
| Q |
520 |
gagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattct |
619 |
Q |
| |
|
||| || || |||||| ||||||||||||||||||||||||||| |||| |||||| ||| || |||| ||||||||| ||||| |||||||||| |
|
|
| T |
5298536 |
attttttgcaaggctgaattaatcaagctttggatggcagaaggtttgttgaagtgctgcagaattgataaaactgaagaagagttgggtaatgaattct |
5298437 |
T |
|
| Q |
620 |
tggattatctagagtccatttcattttt |
647 |
Q |
| |
|
| || ||||||| || |||||||||| |
|
|
| T |
5298436 |
ttgacgatctagaatcagtttcattttt |
5298409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 683 - 962
Target Start/End: Original strand, 6795001 - 6795286
Alignment:
| Q |
683 |
tcatgcatgatcttgttaatgatttggcaaaatctgagtcccaagagttttgcttacaaattgagagtgttaatctgcaagatataactgaaagaacacg |
782 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||||| ||| || |||||||||||||| |||||||||||| |
|
|
| T |
6795001 |
tcatgcatgatcttgtcaatgatttggcaaaatcagtgtcccatgagttttgcttacaaattgagggtgatagtctgcaagatataattgaaagaacacg |
6795100 |
T |
|
| Q |
783 |
tcacattcggtgcaatattgatttggaagatggtgagcgaatattaaaacacatttataagtttaaggggttacgcagcctgttggtag------tacga |
876 |
Q |
| |
|
||| ||| | ||| || |||||| ||||||||||| | || |||| || ||||||| ||| ||||||| ||||||||| | ||||||| ||| | |
|
|
| T |
6795101 |
tcatatttgttgctatcttgattgggaagatggtgcgagagtattgaatcacatttctaatattaagggattacgcagcttcttggtagtaccgctacca |
6795200 |
T |
|
| Q |
877 |
cgaggctatgataaaatacgcttcatgataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtc |
962 |
Q |
| |
|
||||||||| || | | | |||||||||||||||||||| ||||| ||||||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
6795201 |
cgaggctatcattacaaatgcttcatgataagcaacaatttgcaaagtgatctattttcgaaactaaaatatttgcggatgttgtc |
6795286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 253 - 648
Target Start/End: Complemental strand, 5268128 - 5267733
Alignment:
| Q |
253 |
aatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgc |
352 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||| || || || |||||||||||||||||||| ||||||||||| ||||| ||||| || ||||||| |
|
|
| T |
5268128 |
aatgcaagtgaatacccaaatcttgaatcaattggaaagaaaatagtagataagtgtggagggttacctttagctgtaaaaactttgggaaatctcttgc |
5268029 |
T |
|
| Q |
353 |
ggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgag |
452 |
Q |
| |
|
| | |||||||||| |||||||||||| |||||| | ||| | || |||||||| ||| | || ||||| | ||||||||| || | |||||||||| |
|
|
| T |
5268028 |
gaagaaaattctctcaacatgaatgggttaagatattggagacagatatgtggcgtttatcagaaggtgacattaacattaattcagtactgagattgag |
5267929 |
T |
|
| Q |
453 |
ttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttgg |
552 |
Q |
| |
|
||||||| | ||| |||| | | |||| ||||||||| | || || || ||||||| | || |||||||| | |||||| ||||| |||||| |
|
|
| T |
5267928 |
ttaccatcatctcccttccaatctgaagcgctgtttttcttattgttccttatttcccaaaggcaagtggtttgacaaaggtgaattaatcaaactttgg |
5267829 |
T |
|
| Q |
553 |
atggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttcatttttc |
648 |
Q |
| |
|
||||| || ||||||||||| ||| |||||| ||| ||||| |||||||| |||| ||| |||| || ||| |||||| ||| |||||||||||| |
|
|
| T |
5267828 |
atggccgacggtttgctgaagtgccgcggaacagaaaaaagcgaagaagagctgggtaatcaattattagatgatctagtgtcaatttcatttttc |
5267733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 304 - 620
Target Start/End: Complemental strand, 6900134 - 6899818
Alignment:
| Q |
304 |
aagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgt |
403 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||| |||||| | ||| |||||| ||| ||| |||| ||||| | ||| |||| | | |
|
|
| T |
6900134 |
aagtgtgaagggttgcctttagctctgaaaacattggggaatctcttggaaagaaagttctctgaacctgattgggttaagatgttggagactgatttct |
6900035 |
T |
|
| Q |
404 |
ggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgt |
503 |
Q |
| |
|
|||| ||| | || ||| ||| ||||||||| | |||| ||||||||||| ||||||| |||| | | |||| | ||||||| || || ||| | |
|
|
| T |
6900034 |
ggcgtttaccagagggtaataacaacattaaccctttattgaaattgagttaccttaacctcccttccaatctgaagcattgttttgattattgttcttt |
6899935 |
T |
|
| Q |
504 |
atttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaa |
603 |
Q |
| |
|
|||||| | ||| | ||||||||| | || |||| | |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
6899934 |
atttccaaagggctatgagtttgagaagggtgaagtaatcaagctttggatggcagaaggtttgctgaagtgttgcggaagagacaaaagtgaagaagag |
6899835 |
T |
|
| Q |
604 |
ttgggaaatgaattctt |
620 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
6899834 |
ttgggtaatgaattctt |
6899818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 237 - 648
Target Start/End: Original strand, 4388884 - 4389295
Alignment:
| Q |
237 |
tgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaaca |
336 |
Q |
| |
|
|||||||||||| | |||||||| || || ||||| |||| |||||||||||| || |||||||||||||||| |||||| || |||||||| ||||| |
|
|
| T |
4388884 |
tgcttttcacggaaggaatgcaagtgagtatccaaatcttgtatcaattggcaagaaaattgtagataagtgtgtagggtttccattagctgtaaaaacg |
4388983 |
T |
|
| Q |
337 |
ttggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaact |
436 |
Q |
| |
|
||||| || |||||||| | |||||||||| ||| |||||||| | |||| | ||| | || ||||||| ||| | || ||||| | ||||||||| | |
|
|
| T |
4388984 |
ttgggaaatctcttgcgaagaaaattctctcaacgtgaatgggttaggatattggagaccgatatgtggcatttatcagaaggtgacaataacattaatt |
4389083 |
T |
|
| Q |
437 |
cggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatga |
536 |
Q |
| |
|
| | ||||||||||||||||| | ||| |||| | | | ||||| |||||| | || || || ||||||| | ||| ||||||| | ||| |
|
|
| T |
4389084 |
cagtactgagattgagttaccatcatctcccttccattcttaaacgttgtttttcttattgttccatatttcccaaaggtcacatttttgacaagcgtga |
4389183 |
T |
|
| Q |
537 |
attgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtcc |
636 |
Q |
| |
|
||| |||||||||||||| || || |||||| |||| || |||||||| ||||||||||||||||| ||||| ||||| || || | | ||||||| || |
|
|
| T |
4389184 |
attaatcaagctttggatagcggatggtttgttgaagtgttgcggaagtgacaaaagtgaagaagagttgggtaatgagttatttgttgatctagaatca |
4389283 |
T |
|
| Q |
637 |
atttcatttttc |
648 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4389284 |
atttcatttttc |
4389295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 443 - 648
Target Start/End: Complemental strand, 6917008 - 6916803
Alignment:
| Q |
443 |
tgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgat |
542 |
Q |
| |
|
||||| ||||||||| ||| |||||||| | | |||| | |||||||| ||||| || ||||||| | ||| | ||||||||| | || |||||| || |
|
|
| T |
6917008 |
tgagaatgagttaccttaatctctcttcaaatctgaagcattgttttgcttactgttccatatttcccaagggctatgagtttgagaagggtgaattaat |
6916909 |
T |
|
| Q |
543 |
caagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttca |
642 |
Q |
| |
|
|||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||| |||||||| || || |||||| ||| || ||| |
|
|
| T |
6916908 |
caagctttggatggcagaaggtttgctgaagtgttgtggaagagacaaaagtgaagaagagttgggtaatgaatttttcaatgatctagtgtcaatatca |
6916809 |
T |
|
| Q |
643 |
tttttc |
648 |
Q |
| |
|
|||||| |
|
|
| T |
6916808 |
tttttc |
6916803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 450 - 655
Target Start/End: Complemental strand, 6168791 - 6168586
Alignment:
| Q |
450 |
gagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctt |
549 |
Q |
| |
|
|||||||| ||||||| |||| | | |||| | |||||||| || || ||| ||||||| | ||||| | ||||||| | ||||| ||| ||||||||| |
|
|
| T |
6168791 |
gagttaccttaacctcccttcaaatctgaagcattgttttgcatattgttctatatttcccaagggttataagtttgaaaaggatggattaatcaagctt |
6168692 |
T |
|
| Q |
550 |
tggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttcatttttcg |
649 |
Q |
| |
|
||||||||| |||||||||| || || ||||||| |||||||| ||||||||| ||||| ||||||||||| ||| |||||| ||| || ||||||||| |
|
|
| T |
6168691 |
tggatggcacaaggtttgctaaagtgttgcggaaaagacaaaaatgaagaagagttgggtaatgaattctttgatcatctagtgtcaatgtcatttttcc |
6168592 |
T |
|
| Q |
650 |
aacaat |
655 |
Q |
| |
|
|||||| |
|
|
| T |
6168591 |
aacaat |
6168586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 262 - 567
Target Start/End: Complemental strand, 6245375 - 6245070
Alignment:
| Q |
262 |
gaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaat |
361 |
Q |
| |
|
||||| ||||| |||||||| ||||| | || || ||||| || ||||| |||| |||||||||| ||||||||||||||| ||||||| | || || |
|
|
| T |
6245375 |
gaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtggggggtcgcctttagctctgaaaacattggggattctcttgcaaagaagat |
6245276 |
T |
|
| Q |
362 |
tctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataa |
461 |
Q |
| |
|
||||| || ||||||||| |||||| ||||| |||| ||||||| ||| |||| |||| || |||||| | || | | | ||| ||||||||| ||| |
|
|
| T |
6245275 |
tctctgaaaatgaatgggttaagatattagagactgatttgtggcgtttacctgagagtgacagcaacatttattccgttctaagaatgagttaccttaa |
6245176 |
T |
|
| Q |
462 |
cctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaa |
561 |
Q |
| |
|
|||| |||| | | |||| | |||||||| || || ||| ||||||| | ||||| ||||||||| | ||||| ||| ||||| ||||||||||||||| |
|
|
| T |
6245175 |
cctcccttccaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaaactttggatggcagaa |
6245076 |
T |
|
| Q |
562 |
ggtttg |
567 |
Q |
| |
|
|||||| |
|
|
| T |
6245075 |
ggtttg |
6245070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 304 - 648
Target Start/End: Original strand, 6722077 - 6722421
Alignment:
| Q |
304 |
aagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgt |
403 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| || || ||| | | | ||| ||||||| ||||||||| ||||| | ||| |||| ||| |
|
|
| T |
6722077 |
aagtgtggagggttgcctttagctctgaaaacattgggtaatcttttgagaatacgattttctaaacttgaatgggatcagatattggagactgatttgt |
6722176 |
T |
|
| Q |
404 |
ggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgt |
503 |
Q |
| |
|
|| | ||| | || ||||| | ||||||||| | | | |||||||||| | ||||||| |||| | |||| || |||||||| || || ||| | |
|
|
| T |
6722177 |
ggtgtttatcagagggtgagaacaacattaaccccgtactaagattgagtttctttaacctcccttccgatctgaagcgttgttttgcttattgttctat |
6722276 |
T |
|
| Q |
504 |
atttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaa |
603 |
Q |
| |
|
|||||| | ||| | ||||||||| | | |||| | || |||||||||||| |||||| |||| |||| || ||||||||||||||||||||| |||| |
|
|
| T |
6722277 |
atttcccaagggctatgagtttgagaagagtgaactaattaagctttggatgacagaagatttgttgaagtgttgcggaagagacaaaagtgaacaagag |
6722376 |
T |
|
| Q |
604 |
ttgggaaatgaattcttggattatctagagtccatttcatttttc |
648 |
Q |
| |
|
||||| ||||||||||| ||| |||||| ||| || ||||||||| |
|
|
| T |
6722377 |
ttgggtaatgaattctttgatcatctagtgtcaatatcatttttc |
6722421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 20 - 648
Target Start/End: Complemental strand, 8590034 - 8589403
Alignment:
| Q |
20 |
taacaggcaagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatcttctac |
119 |
Q |
| |
|
||||||||||||| || | |||||| | || ||| ||||||| ||||| ||| |||||||| |||||||||||| |||||||| |||| |||| |
|
|
| T |
8590034 |
taacaggcaagaaatacttgcttgttttagacgatatctggaacgggaatgcagaatgttgggagcagttactacttccctttaaccatggattttctgg |
8589935 |
T |
|
| Q |
120 |
gagtaagattattgtgacaacacgcgataaaaatgtagcat--caa-ttgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgacagt |
216 |
Q |
| |
|
||||||||| | ||||||||||| || || | ||||||| || || | ||||| || |||||||||||||| |||||||||| || || || || |
|
|
| T |
8589934 |
aagtaagattgtcgtgacaacacgtgaaaaggaggtagcatatcatgttcttaaatccaccaagttatttgatttacaacaattggacaaaagcgattgt |
8589835 |
T |
|
| Q |
217 |
tggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggt |
316 |
Q |
| |
|
|||||||||||| |||| ||||||||| || || |||| | ||||| ||||| |||||||||| |||||| || || | |||||||||||||||| |
|
|
| T |
8589834 |
tggagtttatttgtgacacatgcttttcaaggaaagaatgtgtgtgaatatccaaatcttgaatcaactggcaagaaaatactggataagtgtggagggt |
8589735 |
T |
|
| Q |
317 |
tgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctga |
416 |
Q |
| |
|
||||||||||||| ||| || |||| | |||||||| | ||| || ||| ||||||| ||| |||||| | ||| || | |||||||| ||| | || |
|
|
| T |
8589734 |
tgcctttagctgtaaaatcaatgggccaactcttgcgaagaaatttttctcaacatgagtggattaagatattggagactaatatgtggcgtttatcaga |
8589635 |
T |
|
| Q |
417 |
tggtgatagtaacattaactcggctttgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggt |
516 |
Q |
| |
|
||| || | ||| ||||| | | ||||||| ||||||||||| ||| |||| | | | || | || ||| | || || || | ||||| | |||| |
|
|
| T |
8589634 |
tggggaacacagcataaactcagttctgagattaagttaccataatctcccttccattctaaagcattgcttttcttattgttccatttttcccaagggt |
8589535 |
T |
|
| Q |
517 |
tttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaat |
616 |
Q |
| |
|
| ||| ||||| | | ||||||||||||||| ||||||||||||||||| |||| || |||||| | |||||||||||||||| || || |||||| |
|
|
| T |
8589534 |
tatgaatttgaaaaaggtgaattgatcaagctctggatggcagaaggtttattgaagtgttgcggatcacacaaaagtgaagaagagttaggtaatgaaa |
8589435 |
T |
|
| Q |
617 |
tcttggattatctagagtccatttcatttttc |
648 |
Q |
| |
|
| || | | |||| ||||| |||||||||||| |
|
|
| T |
8589434 |
ttttcggtgatcttgagtcaatttcatttttc |
8589403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 87 - 353
Target Start/End: Complemental strand, 5280919 - 5280653
Alignment:
| Q |
87 |
gttactacttccttttaaccaaggatcttctacgagtaagattattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttattt |
186 |
Q |
| |
|
|||||||||||| ||||| || ||||||| | ||||||||||||||||| ||||| || ||| | |||||| || | ||||||| | | || || |
|
|
| T |
5280919 |
gttactacttccctttaatcatggatcttttggaagtaagattattgtgaccacacgtgacaaagaggtagcagcagtaatgaaatcctcccaaatagtt |
5280820 |
T |
|
| Q |
187 |
gatttgaaacaattggagaagagtgacagttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattg |
286 |
Q |
| |
|
||||||| ||||||||| | || || |||||| ||||||| | || |||||||||||| ||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
5280819 |
catttgaagcaattggaggaaagcgatggttggaatttatttgtgagacatgcttttcacggaaaaaatgcaagtgaatatccaaatcttgaatcaattg |
5280720 |
T |
|
| Q |
287 |
gcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcg |
353 |
Q |
| |
|
| || || |||||| | |||||||||||| |||||||||| ||||| |||| ||||| |||||||| |
|
|
| T |
5280719 |
ggaagaaaattgtaaacaagtgtggagggccgcctttagctctgaaatcattagggaatctcttgcg |
5280653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 262 - 569
Target Start/End: Complemental strand, 6259287 - 6258977
Alignment:
| Q |
262 |
gaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaat |
361 |
Q |
| |
|
||||| ||||| |||||||| || ||||| || || ||||| || ||||| |||||||||| |||| ||||||||||||||| ||||||| | ||| | |
|
|
| T |
6259287 |
gaatatccaaatcttgaatcgatcggcaagaaaatagtagaaaaatgtggggggttgccttcagctctgaaaacattggggattctcttgcaaagaaagt |
6259188 |
T |
|
| Q |
362 |
tctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgata---gtaacattaactcggctttgagattgagttacca |
458 |
Q |
| |
|
||||| || ||||||||| |||||| | ||| |||| ||||||| ||| | | ||||| | | |||||| | || ||||||||| ||||||||| |
|
|
| T |
6259187 |
tctctgaaaatgaatgggttaagatattggagactgatttgtggcgtttacccaagggtgacaacagcaacatttattccgctttgagaatgagttacct |
6259088 |
T |
|
| Q |
459 |
taacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggca |
558 |
Q |
| |
|
|| |||| |||| | | |||| | |||||||| || || ||| ||||||| | ||||| ||||||||| | || |||||| |||||||||||||||||| |
|
|
| T |
6259087 |
tagcctcccttccaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaagggtgaattaatcaagctttggatggca |
6258988 |
T |
|
| Q |
559 |
gaaggtttgct |
569 |
Q |
| |
|
|||||||||| |
|
|
| T |
6258987 |
aaaggtttgct |
6258977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 443 - 655
Target Start/End: Original strand, 6591475 - 6591687
Alignment:
| Q |
443 |
tgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgat |
542 |
Q |
| |
|
||||||||||||||| ||||||| | || | | |||| || |||||||| || || ||| ||||||| | ||| | ||||||||| | || |||||| || |
|
|
| T |
6591475 |
tgagattgagttaccttaacctcccatccaatctgaagcgttgttttgcttattgttctatatttcccaagggctatgagtttgagaagggtgaattaat |
6591574 |
T |
|
| Q |
543 |
caagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttca |
642 |
Q |
| |
|
||||||||||||||||||||| ||||| || || || | |||| |||||||||||||| | ||||| ||||||||||| || |||||| ||| || || |
|
|
| T |
6591575 |
caagctttggatggcagaaggcttgctaaagtgttgggaaagacacaaaagtgaagaaaagttgggcaatgaattcttcaatcatctagtgtcaatatcg |
6591674 |
T |
|
| Q |
643 |
tttttcgaacaat |
655 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
6591675 |
tttttccaacaat |
6591687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 537 - 655
Target Start/End: Complemental strand, 6735775 - 6735657
Alignment:
| Q |
537 |
attgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtcc |
636 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| || || |||||| | || | | |||| ||||| |
|
|
| T |
6735775 |
attgatcaagctttggatggcagaaggtttgctgaagtgttgcggatcagacaaaagtgaagaagagtttggcaatgaaattttcggtgatcttgagtca |
6735676 |
T |
|
| Q |
637 |
atttcatttttcgaacaat |
655 |
Q |
| |
|
|||||||||||| |||||| |
|
|
| T |
6735675 |
atttcatttttccaacaat |
6735657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 443 - 655
Target Start/End: Complemental strand, 7749909 - 7749697
Alignment:
| Q |
443 |
tgagattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgat |
542 |
Q |
| |
|
||||||||| ||||| ||||||| |||| | | |||| || |||||||| || || ||| ||||||| | ||| | ||||||||| | | || || || |
|
|
| T |
7749909 |
tgagattgaattaccttaacctcccttccaatctgaagcgttgttttgcttattgttctatatttccaaagggctatgagtttgagaagcgtgggttaat |
7749810 |
T |
|
| Q |
543 |
caagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttca |
642 |
Q |
| |
|
||||||||||||||||||||| ||||| || || || ||||||||||||| ||||||| | ||||| ||||||||||| ||||||||| ||| || || |
|
|
| T |
7749809 |
caagctttggatggcagaaggcttgctaaagtgttggggaagagacaaaactgaagaacagttgggtaatgaattcttcaattatctagtgtcaatatcg |
7749710 |
T |
|
| Q |
643 |
tttttcgaacaat |
655 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
7749709 |
tttttccaacaat |
7749697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 532 - 655
Target Start/End: Original strand, 6480221 - 6480344
Alignment:
| Q |
532 |
gatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctag |
631 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| || |||||| | |||||||||||||||| || || |||||| | || | | |||| | |
|
|
| T |
6480221 |
gatgaattgatcaagctttggatggcagaaggtttgttgaagtgttgcggatcatacaaaagtgaagaagagtttggtaatgaaattttcggtgatcttg |
6480320 |
T |
|
| Q |
632 |
agtccatttcatttttcgaacaat |
655 |
Q |
| |
|
|||| |||||||||||| |||||| |
|
|
| T |
6480321 |
agtcaatttcatttttccaacaat |
6480344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 537 - 648
Target Start/End: Original strand, 6554682 - 6554793
Alignment:
| Q |
537 |
attgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtcc |
636 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| || || |||||| | || | | |||| ||||| |
|
|
| T |
6554682 |
attgatcaagctttggatggcagaaggtttgctgaagtgttgcggatcagacaaaagtgaagaagagtttggtaatgaaattttcggtgatcttgagtca |
6554781 |
T |
|
| Q |
637 |
atttcatttttc |
648 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6554782 |
atttcatttttc |
6554793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 532 - 615
Target Start/End: Complemental strand, 6947059 - 6946976
Alignment:
| Q |
532 |
gatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaa |
615 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| || || |||||| |
|
|
| T |
6947059 |
gatgaattgatcaagctttggatggcagaaggtttgttgaagtgttgcagaagagacaaaagtgaagaagagttaggtaatgaa |
6946976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 262 - 620
Target Start/End: Complemental strand, 6882592 - 6882234
Alignment:
| Q |
262 |
gaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaat |
361 |
Q |
| |
|
||||| ||||| ||||||| || ||||| || || ||||| |||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
6882592 |
gaatatccaaatcttgaattgataggcaagaaaatagtagaaaagtgtggggggttgcctttagcactgaaaacattggggaatctcttgctaaaaaaat |
6882493 |
T |
|
| Q |
362 |
tctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataa |
461 |
Q |
| |
|
||||| || ||||||| ||| || | ||| |||| ||||||| ||| | || ||||| | ||||||||| | ||||||||||||||| || |
|
|
| T |
6882492 |
tctctgaatctgaatggattaaggtattggagactgatttgtggcgtttacccgagggtgaaatctacattaacttgttactgagattgagttaccttat |
6882393 |
T |
|
| Q |
462 |
cctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaa |
561 |
Q |
| |
|
|||| |||| | | |||| || |||||||| || || ||| ||||||| | ||| | |||| |||| | || |||| | || || ||||||||||||||| |
|
|
| T |
6882392 |
cctcccttccaatctgaagcgttgttttgcttattgttctatatttcccaagggctatgagcttgagaagggtgaactaattaaactttggatggcagaa |
6882293 |
T |
|
| Q |
562 |
ggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattctt |
620 |
Q |
| |
|
|||||| |||| || | |||||||||||| ||| |||| || || ||||||||||| |
|
|
| T |
6882292 |
ggtttgttgaagtgtcacaaaagagacaaaagcgaacaagagttaggtaatgaattctt |
6882234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 531 - 655
Target Start/End: Original strand, 6449025 - 6449149
Alignment:
| Q |
531 |
ggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatcta |
630 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||| || |||||| |||||||||||||||||| || || |||||| | || | |||| |
|
|
| T |
6449025 |
ggatgaattgatcaagctttggatggcagaaggtatgttgaagtgttgcggatcagacaaaagtgaagaagagtttggtaatgaaattttctgtgatctt |
6449124 |
T |
|
| Q |
631 |
gagtccatttcatttttcgaacaat |
655 |
Q |
| |
|
||||| |||||||||||| |||||| |
|
|
| T |
6449125 |
gagtcaatttcatttttccaacaat |
6449149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 268 - 648
Target Start/End: Original strand, 6520137 - 6520517
Alignment:
| Q |
268 |
ccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctcta |
367 |
Q |
| |
|
|||||||||||| | ||||||| || || || || |||||||| ||||||||||||||| | ||| ||||||| | || ||||| ||||| || ||| |
|
|
| T |
6520137 |
ccaaaacttgaaacgattggcatgaaaatagtggacaagtgtggtgggttgcctttagctataaaatcattgggccaacttttgcgaaaaaagttttctc |
6520236 |
T |
|
| Q |
368 |
aacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctc |
467 |
Q |
| |
|
|| |||||||| ||||| | ||| |||| |||||||| ||| | || | || | ||||||||| | |||||||||||||||||||| ||| | |
|
|
| T |
6520237 |
aagatgaatggatggagatattggagactgatatgtggcgtttatcagacagagaccacaccattaactcagtattgagattgagttaccataatctccc |
6520336 |
T |
|
| Q |
468 |
ttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttg |
567 |
Q |
| |
|
||| | | | || || |||||||| || || ||| | ||||| | ||||| | | ||| | | ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6520337 |
ttccaatctaaagcgttgttttgcatattgttctatttttcccaagggttataaatttaaaaaagataaattgatcaagctttggatggcagaaggtttg |
6520436 |
T |
|
| Q |
568 |
ctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttcatttttc |
648 |
Q |
| |
|
|||| || | |||| ||||||||||||||||| || || |||||| | || | | |||| ||||| |||||||||||| |
|
|
| T |
6520437 |
ttgaagtgttacggattggacaaaagtgaagaagattttggtaatgaaattttcggtgatcttgagtcaatttcatttttc |
6520517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 253 - 459
Target Start/End: Complemental strand, 5250241 - 5250035
Alignment:
| Q |
253 |
aatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgc |
352 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| ||||| || || ||| ||| ||||||||||||||||| |||||||| ||||| ||||| || ||||||| |
|
|
| T |
5250241 |
aatgcaagtgaatatccaaatcttgaatctattggtaagaaaattataggcaagtgtggagggttgccattagctgtaaaaactttgggaaatctcttgc |
5250142 |
T |
|
| Q |
353 |
ggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgag |
452 |
Q |
| |
|
| | ||| || ||| ||| ||| |||| |||||| | ||| | || |||||||| ||| | || || || ||||||||||| || | |||||||||| |
|
|
| T |
5250141 |
gaagaaagttttctcaacgtgattgggttaagatattggagacagatatgtggcgtttatcagagggcgagagtaacattaattcagtactgagattgag |
5250042 |
T |
|
| Q |
453 |
ttaccat |
459 |
Q |
| |
|
||||||| |
|
|
| T |
5250041 |
ttaccat |
5250035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 268 - 566
Target Start/End: Complemental strand, 6142368 - 6142070
Alignment:
| Q |
268 |
ccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctcta |
367 |
Q |
| |
|
||||| ||||||| || ||||| || || ||||| |||||||| |||||||| |||||| ||||||||||||||| |||||| | |||||||||| |
|
|
| T |
6142368 |
ccaaatcttgaattgataggcaagaaaatagtagaaaagtgtggggggttgccattagctctgaaaacattggggattctcttgaatagaaaattctctg |
6142269 |
T |
|
| Q |
368 |
aacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctc |
467 |
Q |
| |
|
|| |||||||| | |||| | ||| |||| ||||||| ||| | || ||||| | |||||||| || | | ||||| | ||||||| || |||| | |
|
|
| T |
6142268 |
aaattgaatgggttaggatattggagactgatttgtggcgtttaccagagggtgacggaaacattaattccgttctgagaatcagttaccttagcctccc |
6142169 |
T |
|
| Q |
468 |
ttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggttt |
566 |
Q |
| |
|
||| | |||| | |||||||| || || ||| ||||||| | ||| | ||||||||| | || |||||| |||||||||||||||||||||||||| |
|
|
| T |
6142168 |
ttctgatctgaagcattgttttgcttattgttctatatttcccaagggctatgagtttgagaagggtgaattaatcaagctttggatggcagaaggttt |
6142070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 513 - 655
Target Start/End: Complemental strand, 6265528 - 6265386
Alignment:
| Q |
513 |
gggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaat |
612 |
Q |
| |
|
||||| ||||||||| || |||||| |||| |||||||||||||||||||||| | || || ||||||||| ||||||| ||||||| || || ||| |
|
|
| T |
6265528 |
gggttatgagtttgaggagggtgaattaatcaggctttggatggcagaaggtttgttaaattgttgcggaagaaacaaaagcaaagaagagttagggaat |
6265429 |
T |
|
| Q |
613 |
gaattcttggattatctagagtccatttcatttttcgaacaat |
655 |
Q |
| |
|
|||||||| ||| | |||| ||| || ||||||||| |||||| |
|
|
| T |
6265428 |
gaattcttcgatcaactagtgtcaatgtcatttttccaacaat |
6265386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 484 - 655
Target Start/End: Original strand, 13270722 - 13270887
Alignment:
| Q |
484 |
tgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaa |
583 |
Q |
| |
|
|||||||| || || ||| ||||||| | ||||| ||||||||| | ||||| ||| |||||||||||||||||| |||||||||| || |||| |
|
|
| T |
13270722 |
tgttttgcatattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaa------gggaa |
13270815 |
T |
|
| Q |
584 |
gagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttcatttttcgaacaat |
655 |
Q |
| |
|
|| ||||| ||||||||| ||||| ||| ||||||| || |||||| ||| ||||| |||||| |||||| |
|
|
| T |
13270816 |
tagccaaaaatgaagaagagttgggtaataaattcttcaatgatctagtgtcaatttcgtttttccaacaat |
13270887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 262 - 465
Target Start/End: Complemental strand, 6736050 - 6735847
Alignment:
| Q |
262 |
gaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaat |
361 |
Q |
| |
|
||||| ||||| |||||||||||||| || || || || || |||||||||||||||||| ||||| | ||| ||||||| | || ||||| |||||| |
|
|
| T |
6736050 |
gaatatccaaatcttgaatcaattgggaagaaaatagtggagaagtgtggagggttgcctctagctataaaatcattgggccaacttttgcgtaaaaaac |
6735951 |
T |
|
| Q |
362 |
tctctaaacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataa |
461 |
Q |
| |
|
| ||| ||||||||||| |||||| | ||| |||| |||||||| ||| | ||||| || ||||||||||| | | ||||||||||||||||| |
|
|
| T |
6735950 |
tttctgaacatgaatggattaagatattggagactgatatgtggcgtttatcagatggggaccacaacattaactcagtactaagattgagttaccataa |
6735851 |
T |
|
| Q |
462 |
cctc |
465 |
Q |
| |
|
||| |
|
|
| T |
6735850 |
tctc |
6735847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 378
Target Start/End: Complemental strand, 8454809 - 8454598
Alignment:
| Q |
167 |
tgaaatctacaaagttatttgatttgaaacaattggagaagagtgacagttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaata |
266 |
Q |
| |
|
||||||| ||| ||||||||||||| |||||||||| || || | |||||||||||||| |||| ||||||||| || || | || ||||| |
|
|
| T |
8454809 |
tgaaatcgacagagttatttgatttacaacaattggacaaaagcaattgttggagtttatttgtgacacatgcttttcaaggaaagagtgtgtctgaata |
8454710 |
T |
|
| Q |
267 |
cccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctct |
366 |
Q |
| |
|
||||| ||||||||| |||| | ||| || || || |||||||||||||||||||||||| | ||| ||||||| | || ||||||||| ||| ||| |
|
|
| T |
8454709 |
tccaaatcttgaatcagttggtagaaaaatagtggaaaagtgtggagggttgcctttagctataaaatcattgggccaacttctgcggaaaacattttct |
8454610 |
T |
|
| Q |
367 |
aaacatgaatgg |
378 |
Q |
| |
|
||||||||||| |
|
|
| T |
8454609 |
gaacatgaatgg |
8454598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 894 - 959
Target Start/End: Complemental strand, 5263220 - 5263155
Alignment:
| Q |
894 |
acgcttcatgataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgtt |
959 |
Q |
| |
|
|||||||| |||| |||| |||||| || ||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
5263220 |
acgcttcaagatatgcaagaatgtgaaaattgatctgttttcaaatctaaaatatctgcgtatgtt |
5263155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 343
Target Start/End: Complemental strand, 6265845 - 6265698
Alignment:
| Q |
196 |
caattggagaagagtgacagttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaaga |
295 |
Q |
| |
|
||||||||| |||||||| ||||||||||||| | | ||||||||| ||||| |||| ||||| ||||| ||||||| |||||||| || | |
|
|
| T |
6265845 |
caattggaggagagtgactcttggagtttatttgtgagatatgcttttcaaggcaagaatgtgtttgaatatccaaatcttgaattgattggcaagaaaa |
6265746 |
T |
|
| Q |
296 |
ttgtagataagtgtggagggttgcctttagctgtgaaaacattgggga |
343 |
Q |
| |
|
| |||| || ||||| |||||||||||| || ||||||||||||||| |
|
|
| T |
6265745 |
tagtagcaaaatgtggggggttgcctttaactctgaaaacattgggga |
6265698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 902 - 965
Target Start/End: Original strand, 6449393 - 6449456
Alignment:
| Q |
902 |
tgataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtcatt |
965 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||| ||||| | | |||||||||| ||||| |
|
|
| T |
6449393 |
tgataaggaacaatgtgcaacatgatctgttttcaagactaacaagtttgcggatgttatcatt |
6449456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 6479957 - 6480096
Alignment:
| Q |
268 |
ccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctcta |
367 |
Q |
| |
|
|||||||||||||||||||||| || || | || ||||||| |||||||||||||||| | | | ||||||| | || ||||||||||| || ||| |
|
|
| T |
6479957 |
ccaaaacttgaatcaattggcaggaaaataatggacaagtgtgaagggttgcctttagctataatatcattgggccaacttttgcggaaaaagttttctc |
6480056 |
T |
|
| Q |
368 |
aacatgaatgggaaaagatactagaggctgacatgtggcg |
407 |
Q |
| |
|
|| |||||||| |||||| | ||| |||| |||||||| |
|
|
| T |
6480057 |
aagatgaatggatgaagatattggagactgatatgtggcg |
6480096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 327
Target Start/End: Complemental strand, 6947323 - 6947264
Alignment:
| Q |
268 |
ccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagct |
327 |
Q |
| |
|
|||||||||||||||||||| | || || || || |||||||||||||||||||||||| |
|
|
| T |
6947323 |
ccaaaacttgaatcaattgggaggaaaatagtggacaagtgtggagggttgcctttagct |
6947264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 615
Target Start/End: Complemental strand, 8454444 - 8454361
Alignment:
| Q |
532 |
gatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaa |
615 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| |||| || |||||| ||| |||||||||||| || || |||||| |
|
|
| T |
8454444 |
gatgaactgatcatgctttggatggcagaaggtttgttgaagtgttgcggatctaacagaagtgaagaagagtttggtaatgaa |
8454361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 6448575 - 6448629
Alignment:
| Q |
89 |
tactacttccttttaaccaaggatcttctacgagtaagattattgtgacaacacg |
143 |
Q |
| |
|
|||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
6448575 |
tactgcttccgtttaaccatggatcttctggaagtaagattattgtgacaacacg |
6448629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 903 - 937
Target Start/End: Complemental strand, 8589163 - 8589129
Alignment:
| Q |
903 |
gataagcaacaatgtgcaacgtgatctgttttcaa |
937 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
8589163 |
gataagcaacaatgtgcaacatgatctgttttcaa |
8589129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 6479764 - 6479829
Alignment:
| Q |
78 |
ttgggagacgttactacttccttttaaccaaggatcttctacgagtaagattattgtgacaacacg |
143 |
Q |
| |
|
||||||| |||||||||||| |||||||| ||||||| | ||||||||||| ||||||||||| |
|
|
| T |
6479764 |
ttgggagcagttactacttccatttaaccatggatcttttggaagtaagattatcgtgacaacacg |
6479829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 904 - 957
Target Start/End: Complemental strand, 6735384 - 6735331
Alignment:
| Q |
904 |
ataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatg |
957 |
Q |
| |
|
|||| |||||||||||||| || ||| ||||||| |||||||| |||||||||| |
|
|
| T |
6735384 |
ataaccaacaatgtgcaacatggtctattttcaagactaaaatgtctgcggatg |
6735331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 903 - 936
Target Start/End: Complemental strand, 6946700 - 6946667
Alignment:
| Q |
903 |
gataagcaacaatgtgcaacgtgatctgttttca |
936 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
6946700 |
gataagcaaaaatgtgcaacgtgatctgttttca |
6946667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 154; Significance: 4e-81; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 268 - 877
Target Start/End: Original strand, 6573270 - 6573882
Alignment:
| Q |
268 |
ccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctcta |
367 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||| | |||||| ||| |
|
|
| T |
6573270 |
ccaaatcttgaatcgattggcaaggagattgtagacaaatgtggagggttgcctttagccgtgaaaacattggggaatctcttgcaaagaaaattttctc |
6573369 |
T |
|
| Q |
368 |
aacatgaatgggaaaagatactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctc |
467 |
Q |
| |
|
| ||||||| |||||| | || |||| ||||||| || | | || || | | |||||||||| |||||||||||||| ||||| ||| | |
|
|
| T |
6573370 |
agggtgaatggtttaagatattggaaactgatatgtggcatgtatcgaagggcaatgatgaaattaactcggtattgagattgagttatcataatctccc |
6573469 |
T |
|
| Q |
468 |
ttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttg |
567 |
Q |
| |
|
||| | | | || || |||||||| || || || ||||||| | ||||| | | ||||| | |||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
6573470 |
ttccaatctaaagcgttgttttgcatattgttccatatttcccaagggttataaatttgaaaaagatgaattgatcaacctttggatggctgaaggtttg |
6573569 |
T |
|
| Q |
568 |
ctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtccatttcatttttcgaacaattaaa--ctat-g |
664 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||||| | | | || |
|
|
| T |
6573570 |
ctgaaatgttgcggaagagacaaaagtgaacaagagttgggtaatgaattcttggatgatctagagtccatttcatttttccaacaatcagagtcgatat |
6573669 |
T |
|
| Q |
665 |
atggtcatacaagatttctcatgcatgatcttgttaatgatttggcaaaatctgagtcccaagagttttgcttacaaattgagagtgttaatctgcaaga |
764 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||| || ||||| ||||||||| | |||||||||||||||||| ||| || ||||||| |
|
|
| T |
6573670 |
ttggtcatatgggattatgcatgcatgatcttgtaaatgatttagctaaatcagagtcccaaaaattttgcttacaaattgagggtgatagggtgcaaga |
6573769 |
T |
|
| Q |
765 |
tataactgaaagaacacgtcacattcggtgcaatattgatttggaagatggtgagcgaatattaaaacacatttataagtttaaggggttacgcagcctg |
864 |
Q |
| |
|
|||| ||||||| |||||||| ||| ||||| ||| |||||||||||||| ||||||| || |||||||||| | ||||||| ||||||||||| |
|
|
| T |
6573770 |
tatatctgaaaggacacgtcatatttggtgctcccttggtttggaagatggtgctagaatattgaagcacatttatatgattaagggattacgcagccta |
6573869 |
T |
|
| Q |
865 |
ttggtagtacgac |
877 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
6573870 |
ttggtaggacgac |
6573882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 896 - 967
Target Start/End: Original strand, 6573922 - 6573993
Alignment:
| Q |
896 |
gcttcatgataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatgttgtcattct |
967 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
6573922 |
gcttcatgatgagcaacaacgtgcaacgtgatctattttcaaaactgaaatatttgcggatgttgtcattct |
6573993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 237 - 379
Target Start/End: Original strand, 25242098 - 25242243
Alignment:
| Q |
237 |
tgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagatt---gtagataagtgtggagggttgcctttagctgtgaaa |
333 |
Q |
| |
|
|||||||||||| | |||||||| ||||| ||||| |||| |||||||||||| || || ||||| |||||||||| ||||||||||||||| ||| |
|
|
| T |
25242098 |
tgcttttcacggaaggaatgcaagtgaatatccaaatcttgcatcaattggcaagaaaataatagtagaaaagtgtggagcgttgcctttagctgtaaaa |
25242197 |
T |
|
| Q |
334 |
acattggggaacctcttgcggaaaaaattctctaaacatgaatggg |
379 |
Q |
| |
|
||| |||||| |||||||| | |||||||||| |||||||||||| |
|
|
| T |
25242198 |
acaacggggaatctcttgcgaagaaaattctctcaacatgaatggg |
25242243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 608
Target Start/End: Original strand, 25242285 - 25242448
Alignment:
| Q |
445 |
agattgagttaccataacctctcttcgagtttgaaacgctgttttgcctactgctctgtatttcctaggggttttgagtttgacagggatgaattgatca |
544 |
Q |
| |
|
||||||||||||||||| ||| |||| | | |||| || |||||| ||||| || ||||||||| |||| || ||| || || |||||| |||| |
|
|
| T |
25242285 |
agattgagttaccataatctcccttccaatctgaagcgttgttttagttactgttccatatttcctaaaggttatgctttttgcaagggtgaattaatca |
25242384 |
T |
|
| Q |
545 |
agctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattggg |
608 |
Q |
| |
|
|||||||||| ||| |||| |||||||| || || ||| | |||||||||||||||| ||||| |
|
|
| T |
25242385 |
agctttggatagcataaggcttgctgaagtgttgtagaacaaacaaaagtgaagaagagttggg |
25242448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 55; Significance: 4e-22; HSPs: 3)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 537 - 655
Target Start/End: Original strand, 7721 - 7839
Alignment:
| Q |
537 |
attgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaagaattgggaaatgaattcttggattatctagagtcc |
636 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||| || || |||||| | || | | |||| ||||| |
|
|
| T |
7721 |
attgatcaagctttggatgggagaaggtttgctgaagtgttgcggatcagacaaaagtgaagaagagtttggcaatgaaattttcggtgatcttgagtca |
7820 |
T |
|
| Q |
637 |
atttcatttttcgaacaat |
655 |
Q |
| |
|
|||||||||||| |||||| |
|
|
| T |
7821 |
atttcatttttccaacaat |
7839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 470
Target Start/End: Original strand, 7270 - 7654
Alignment:
| Q |
89 |
tactacttccttttaaccaaggatcttctacgagtaagattattgtgacaacacgcgataaaaatgtagcat--caa-ttgtgaaatctacaaagttatt |
185 |
Q |
| |
|
|||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||| || || | ||||||| || || | ||||| || || ||||| |
|
|
| T |
7270 |
tactacttccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcatgtcatgttctaaaatcaaccaaattatt |
7369 |
T |
|
| Q |
186 |
tgatttgaaacaattggagaagagtgacagttggagtttattttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaatt |
285 |
Q |
| |
|
|||||| |||||||||| || || | ||||||| |||||| |||| ||||||||| || |||| || | ||||| ||||| |||||| ||||| |
|
|
| T |
7370 |
tgatttacaacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaatt |
7469 |
T |
|
| Q |
286 |
ggcaaaaagattgtagataagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaaga |
385 |
Q |
| |
|
|| || || || || || |||||||||||||||||||||||| | ||| |||||| | || |||| | |||||| ||| ||||||||||| |||| |
|
|
| T |
7470 |
gggaagaaaatagtggacaagtgtggagggttgcctttagctataaaatcattggcacaacttctgcgtagaaaattttctgaacatgaatggattaaga |
7569 |
T |
|
| Q |
386 |
tactagaggctgacatgtggcgcttagctgatggtgatagtaacattaactcggctttgagattgagttaccataacctctcttc |
470 |
Q |
| |
|
|| | ||| | ||||||||||| ||| | || || ||| | ||||||||| | ||||||||||||||||||| ||| |||| |
|
|
| T |
7570 |
tattggagaccgacatgtggcgtttatcagacggggatcacaccattaactcagtactgagattgagttaccataatctcccttc |
7654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 904 - 957
Target Start/End: Original strand, 8112 - 8165
Alignment:
| Q |
904 |
ataagcaacaatgtgcaacgtgatctgttttcaaaactaaaatatctgcggatg |
957 |
Q |
| |
|
|||| |||||||||||||| || ||| ||||||| |||||||| |||||||||| |
|
|
| T |
8112 |
ataaccaacaatgtgcaacatggtctattttcaagactaaaatgtctgcggatg |
8165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0958 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0958
Description:
Target: scaffold0958; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 685 - 747
Target Start/End: Original strand, 253 - 315
Alignment:
| Q |
685 |
atgcatgatcttgttaatgatttggcaaaatctgagtcccaagagttttgcttacaaattgag |
747 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| | | | |||||||||||||||||| |
|
|
| T |
253 |
atgcatgatcttgttaatgatttggcaaaatcagagtctcgacaattttgcttacaaattgag |
315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 620
Target Start/End: Original strand, 35140554 - 35140671
Alignment:
| Q |
503 |
tatttcctaggggttttgagtttgacagggatgaattgatcaagctttggatggcagaaggtttgctgaaatgctgcggaagagacaaaagtgaagaaga |
602 |
Q |
| |
|
||||||| | ||||| ||||||||| | |||| ||| ||||||||||||||| ||||||||||||| || | || | || || ||||| ||||||||| |
|
|
| T |
35140554 |
tatttcccaagggttatgagtttgaaaatgatggattaatcaagctttggatgacagaaggtttgctaaagggttgggaaatagccaaaaatgaagaaga |
35140653 |
T |
|
| Q |
603 |
attgggaaatgaattctt |
620 |
Q |
| |
|
||||| ||| ||||||| |
|
|
| T |
35140654 |
gttgggtaataaattctt |
35140671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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