View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14145_high_12 (Length: 457)
Name: NF14145_high_12
Description: NF14145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14145_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 424; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 12 - 439
Target Start/End: Original strand, 26490404 - 26490831
Alignment:
| Q |
12 |
acagacaatggcttcaccaccaagtcaccaacacaaaaagatgcaacaaatgtggatatcaagaaatattggctagctagttcataaataaacttaacag |
111 |
Q |
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| T |
26490404 |
acagacaatggcttcaccaccaagtcaccaacacaaaaagatgcaacaaatgtggatatcaagaaatattggctagctagttcataaataaacttaacag |
26490503 |
T |
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| Q |
112 |
tttatattatattgcctgaagcaaaataaaagtatgcttcagctatatattgcctcaagtgctttttctcaattacagcccataaaattgaccactaaat |
211 |
Q |
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| T |
26490504 |
tttatattatattgcctgaagcaaaataaaagtatgcctcagctatatattgcctcaagtgctttttctcaattacagcccataaaattgaccactaaat |
26490603 |
T |
|
| Q |
212 |
gctggctcttcatcattttctttggtataaaattccatcatatttccccctcattgctttaactaatttcacactctaatattcaaccattgaattatat |
311 |
Q |
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| T |
26490604 |
gctggctcttcatcattttctttggtataaaattccatcatatttccccctcattgctttaactaatttcacactctaatattcaaccattgaattatat |
26490703 |
T |
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| Q |
312 |
cttcagtgatatcctctctttcaggttcaaatagtagatcatgtgaaaatccttcatacaatttgatacttttgtcacttgatgaagcttcttcatacaa |
411 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26490704 |
cttcagtgatatcctctctttcaggttcaaatagtagatcatgtgaaaatccttcatacaatttgatacttttgtcacttgatgaagcttcttcatacaa |
26490803 |
T |
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| Q |
412 |
ttttagtgaggcagttggatcagtcaca |
439 |
Q |
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| T |
26490804 |
ttttagtgaggcagttggatcagtcaca |
26490831 |
T |
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