View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14145_high_26 (Length: 348)
Name: NF14145_high_26
Description: NF14145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14145_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 36048864 - 36049172
Alignment:
| Q |
16 |
atcacaccaccttcacttaaattgcaaacaagcaatcaacaaagggcgagttagtagcggggcctactaaagtcgtggttccggttagaacaacaactaa |
115 |
Q |
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| T |
36048864 |
atcacaccaccttcacttaaattgcaaacaagcaatcaacaaagggcgagttagtagcggggcctactaaagtcgtggttccggttagaacaacaactaa |
36048963 |
T |
|
| Q |
116 |
ttacataagagtgaagaattcggccaagtgttgccactaaagagcagttgtaataattctgaattatttcgtgaataattagggtttatagtgttcactg |
215 |
Q |
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| T |
36048964 |
ttacataagagtgaagaattcggccaagtgttgccactaaagagcagttg---taattctgtattattttgtgaataattagggtttatagtgttcactg |
36049060 |
T |
|
| Q |
216 |
atccctacattcgatcggtcctctcgccccttgcccctctaatatgcctatagccatactcaactgttcccccaccccaaatgctatcatatttgattca |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36049061 |
atccctacattcgatcggtcctctcgccccttgcccctctaatatgcctatagccatactcaactgttcccccaccccaaatgctatcatatttgattca |
36049160 |
T |
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| Q |
316 |
tatataccatat |
327 |
Q |
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|||||||||||| |
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| T |
36049161 |
tatataccatat |
36049172 |
T |
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