View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14145_low_23 (Length: 373)
Name: NF14145_low_23
Description: NF14145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14145_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 5350772 - 5351134
Alignment:
| Q |
1 |
tgggctaccaatacagacctcaagtaagcaaaaatagcactaagaattgacattgcagtgtaaactccaaccatccagcctttagtgatgcttggaaatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5350772 |
tgggctaccaatacagacctcaagtaagcaaaaatagcactaagaattgacattgcagtgtaaactccaaccatccagcctttagtgatgcttggaaatt |
5350871 |
T |
|
| Q |
101 |
cacttgatagagcaatccaataagatgcaccagctgaaaaagcagcaaaacctaacaatgctattaagcttaaaaactgaagaagcattcccttggagat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5350872 |
cacttgatagagcaatccaataagatgcaccagctgaaaaagcagcaaaacctaacaatgctattaagcttaaaaactgaagaagcattcccttggagat |
5350971 |
T |
|
| Q |
201 |
tataatgtaatccaagtacagttcccatccagaacttccaatttctatatattcttcttgagtaagttgttgccctccgataattgtctcacatatttcg |
300 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
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| T |
5350972 |
tataatgtaatccaagtacagttcccatccagaacttccaatttctatatattcttcttgagtaagttgttgcccgccgatacttgtctcacatatttca |
5351071 |
T |
|
| Q |
301 |
tcattgttgtttttcttagtagcaggatcactaactctttctatttcttgactttttcctttg |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5351072 |
tcattgttgtttttcttagtagcaggatcactaactctttctatttcttgactttttcctttg |
5351134 |
T |
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