View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14145_low_44 (Length: 264)
Name: NF14145_low_44
Description: NF14145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14145_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 42727939 - 42727693
Alignment:
| Q |
1 |
ctctactctgaatatggaaaatgtgaactatatattatggagnnnnnnnntcatatatcatatgttaaagataatgtacaatttgtgctttttcaacaaa |
100 |
Q |
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| T |
42727939 |
ctctactctgaatatggaaaatgtgaactatatattatgga-aaaaaaaatcatatatcatatgttaaagataatgtacaatttgtgctttttcaacaaa |
42727841 |
T |
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| Q |
101 |
gaataatatgtgcttctatatattgttattgttcaataattagtttgcccttttatttattaccttcccctctgatagtcctgctatgctttccttaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
42727840 |
gaataatatgtgcttctatatattgttattgttcaataattagttagcccttttatttattacctttccctctgatagtcctgctatgctttccttaaat |
42727741 |
T |
|
| Q |
201 |
atatatcattctaagtttcgtcaaataaagcattgagagatttttctt |
248 |
Q |
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|||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
42727740 |
atatatcattctcaatttcgtcaaataaagcattgagagatttttctt |
42727693 |
T |
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