View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14145_low_45 (Length: 252)
Name: NF14145_low_45
Description: NF14145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14145_low_45 |
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Alignment Details
Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13441678 - 13441846
Alignment:
| Q |
1 |
ctaaatctcaaaccgaagttgtagagacaaaccttcaaccaaatgaccttttaaagacagacagtttaaattcgtactctatagacaattaaattggagg |
100 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13441678 |
ctaaatctcaaaccgaagttgtagagacaaacgttcaaccaaatgaccttttaaagacagacagtttaaattcgtactctatagacaattaaattggagg |
13441777 |
T |
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| Q |
101 |
cccttctgtcctacttaggtgcgagtatggtgacttcatctttttctctcttctatcaatcattccctc |
169 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13441778 |
cccttctgtcctacttgggtgcgagtatggtgacttcatctttttctctcttctatcaatcattccctc |
13441846 |
T |
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