View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14146_high_6 (Length: 502)
Name: NF14146_high_6
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14146_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 40 - 490
Target Start/End: Original strand, 30796899 - 30797349
Alignment:
| Q |
40 |
ttcggatacccatttgtatctttttgcctatatatacaccgtatactgtatagaaatgttgaaaggaggacttaagaagagtgagagtgatgggtgctca |
139 |
Q |
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| T |
30796899 |
ttcggatacccatttgtatctttttgcctatatatacactgtatactgtatagaaatgttgaaaggaggacttaagaagactgagagtgatgggtgctca |
30796998 |
T |
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| Q |
140 |
catatgcttttctcatatgtggttcaatgttggatatgtgtaacttggcatacatatgaaattgaaggacgaattttgatcagtcgacgaagtaccaaat |
239 |
Q |
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| T |
30796999 |
catatgcttttctcatatgtggttcaatgttggatatgtgtaacttggcattcatatgaaattgaaggacgaattttgatcagtcgacgaagtatcaaat |
30797098 |
T |
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| Q |
240 |
gatatagaaatcatatttttctcttcatattatttggtattttgccgatttgattcaaattcgataattcacgaagaatgatctaacatattataaggta |
339 |
Q |
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| T |
30797099 |
gatatacaaatcatatttttctcttcatattatttagtattttgccgatttgattgaatttcgataattcacgaagaatgatctagcatattataaggta |
30797198 |
T |
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| Q |
340 |
ataattaccccttgtttctttgtaacatttcattttgtgagtgaatctcaatgtttacaccttgattatctattatgcattatttcaattgtatgttacg |
439 |
Q |
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| T |
30797199 |
ataattaccccttgtttctttgtaacttttcattttgtgagtgaatctcaatgtttacaccttgattatctattatgcattatttcaattgtatgttacg |
30797298 |
T |
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| Q |
440 |
attctatattacttataaccatgacaacattgattttatgttagaataatc |
490 |
Q |
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| T |
30797299 |
attctatattatttataaccatgacaacattgattttatgttagaataatc |
30797349 |
T |
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