View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14146_low_15 (Length: 338)
Name: NF14146_low_15
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14146_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 320
Target Start/End: Original strand, 28668421 - 28668728
Alignment:
| Q |
13 |
aaaatctaaccatgctaaagacaaaaattacataatcttcacaaaaaagagaactacttttgtttctacaagcatgagatcaaagcaaagaacaataaca |
112 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28668421 |
aaaatctaaccatactaaagacaaaaattacataatcttcacaaaaaagagaactacttttgtttctacaagcatgagatcaaagcaaagaacaataaca |
28668520 |
T |
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| Q |
113 |
ataacaaaagggaaaaggtttaaagaccaaccaaccttaaagaaccagtaactgagaagcaacccagtttggcttaatcttcaaacttcatagttctctt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28668521 |
ataacaaaagggaaaaggtttaaagaccaaccaaccttaaagaaccagtaactgagaagcaacccagtttggcttaatcttcaaacttcatagttctctt |
28668620 |
T |
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| Q |
213 |
tctctctctaataatacaatatacaagtagtggaatgcttctagaataatgaatgaagacaacacaatctgatcctaagcaaaaaacgtgtctttcatac |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28668621 |
tctctctctaataatacaatatacaagtagtggaatgcttctagaataatgaatgaagacaacacaatctgatcctaagcaaaaaacgtgtctttcatac |
28668720 |
T |
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| Q |
313 |
tcttaaga |
320 |
Q |
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|||||||| |
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| T |
28668721 |
tcttaaga |
28668728 |
T |
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