View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14146_low_22 (Length: 267)

Name: NF14146_low_22
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14146_low_22
NF14146_low_22
[»] chr5 (41 HSPs)
chr5 (31-242)||(7748931-7749142)
chr5 (33-134)||(11977604-11977705)
chr5 (37-150)||(7721096-7721208)
chr5 (44-149)||(4630866-4630971)
chr5 (31-134)||(14620527-14620631)
chr5 (31-150)||(39566183-39566303)
chr5 (31-132)||(6518994-6519097)
chr5 (31-150)||(38369873-38369991)
chr5 (31-150)||(26660755-26660874)
chr5 (31-150)||(26932348-26932467)
chr5 (31-149)||(3306042-3306161)
chr5 (31-134)||(15167045-15167147)
chr5 (31-134)||(38362171-38362274)
chr5 (31-77)||(7736447-7736493)
chr5 (44-134)||(35765947-35766037)
chr5 (31-96)||(28591660-28591725)
chr5 (31-131)||(34446060-34446161)
chr5 (43-150)||(39504722-39504831)
chr5 (31-134)||(2729819-2729923)
chr5 (37-149)||(24281098-24281209)
chr5 (37-149)||(24381002-24381113)
chr5 (31-134)||(42104096-42104200)
chr5 (31-82)||(14161934-14161985)
chr5 (31-149)||(27797782-27797897)
chr5 (107-150)||(42978176-42978219)
chr5 (31-150)||(4424977-4425094)
chr5 (31-149)||(36164888-36165006)
chr5 (31-131)||(14005911-14006012)
chr5 (31-150)||(21375683-21375804)
chr5 (26-120)||(34208921-34209017)
chr5 (65-125)||(36073698-36073758)
chr5 (26-96)||(843072-843143)
chr5 (63-150)||(7579935-7580022)
chr5 (40-134)||(13761573-13761668)
chr5 (24-121)||(13974302-13974401)
chr5 (31-82)||(21634180-21634230)
chr5 (31-82)||(21642427-21642477)
chr5 (44-134)||(10344979-10345069)
chr5 (69-150)||(27600399-27600480)
chr5 (34-82)||(1309395-1309443)
chr5 (55-127)||(21195402-21195474)
[»] chr6 (18 HSPs)
chr6 (31-150)||(18737121-18737243)
chr6 (31-150)||(577061-577181)
chr6 (31-134)||(9940664-9940767)
chr6 (26-150)||(32193702-32193827)
chr6 (31-134)||(234050-234154)
chr6 (31-150)||(3988777-3988894)
chr6 (43-123)||(17267653-17267733)
chr6 (31-82)||(17828351-17828402)
chr6 (31-131)||(29713439-29713540)
chr6 (31-150)||(24163747-24163867)
chr6 (31-82)||(16128040-16128091)
chr6 (31-131)||(23259358-23259459)
chr6 (31-93)||(10540509-10540572)
chr6 (31-134)||(19600437-19600540)
chr6 (31-87)||(13011381-13011434)
chr6 (31-131)||(19674999-19675098)
chr6 (71-133)||(34513677-34513739)
chr6 (74-150)||(10520716-10520792)
[»] chr3 (39 HSPs)
chr3 (31-134)||(36844773-36844876)
chr3 (31-150)||(45213752-45213872)
chr3 (31-134)||(19373602-19373705)
chr3 (31-150)||(22857090-22857209)
chr3 (31-134)||(30431136-30431240)
chr3 (44-150)||(50646154-50646260)
chr3 (31-150)||(33194061-33194181)
chr3 (31-150)||(35557788-35557908)
chr3 (31-150)||(53200711-53200830)
chr3 (38-121)||(40487857-40487940)
chr3 (31-149)||(9189466-9189584)
chr3 (31-129)||(30934840-30934938)
chr3 (44-150)||(50038215-50038321)
chr3 (27-127)||(42072008-42072109)
chr3 (10-134)||(3152811-3152940)
chr3 (31-150)||(36460806-36460925)
chr3 (31-134)||(38016391-38016494)
chr3 (31-131)||(48901739-48901839)
chr3 (31-131)||(48903305-48903405)
chr3 (31-134)||(50088346-50088450)
chr3 (31-150)||(51398010-51398130)
chr3 (31-125)||(45566824-45566919)
chr3 (52-150)||(4758991-4759089)
chr3 (31-134)||(30315325-30315429)
chr3 (27-133)||(33024325-33024433)
chr3 (31-134)||(36729840-36729944)
chr3 (31-131)||(8817159-8817260)
chr3 (107-150)||(39356885-39356928)
chr3 (10-134)||(38140966-38141095)
chr3 (31-134)||(47895374-47895478)
chr3 (36-150)||(11393545-11393660)
chr3 (26-121)||(27067637-27067731)
chr3 (71-150)||(41850390-41850469)
chr3 (26-150)||(47823472-47823601)
chr3 (31-96)||(13756903-13756969)
chr3 (31-69)||(39359002-39359040)
chr3 (32-69)||(31853593-31853630)
chr3 (89-150)||(47137963-47138024)
chr3 (31-134)||(32492211-32492315)
[»] chr2 (40 HSPs)
chr2 (31-134)||(18719466-18719569)
chr2 (33-131)||(19164376-19164474)
chr2 (31-150)||(37038803-37038919)
chr2 (31-147)||(40608639-40608753)
chr2 (31-150)||(38926606-38926726)
chr2 (31-134)||(18579183-18579286)
chr2 (44-150)||(45301765-45301871)
chr2 (31-131)||(11132569-11132670)
chr2 (31-131)||(25383518-25383618)
chr2 (31-134)||(12566014-12566117)
chr2 (31-150)||(29411696-29411815)
chr2 (44-150)||(35799203-35799308)
chr2 (31-134)||(441264-441368)
chr2 (66-150)||(4469501-4469585)
chr2 (31-131)||(7028846-7028946)
chr2 (31-150)||(8540038-8540158)
chr2 (31-150)||(13561994-13562114)
chr2 (31-134)||(29396713-29396817)
chr2 (31-134)||(45081933-45082037)
chr2 (31-131)||(4658265-4658367)
chr2 (31-133)||(12393952-12394057)
chr2 (53-131)||(9391614-9391692)
chr2 (44-145)||(16463079-16463180)
chr2 (31-150)||(29808812-29808933)
chr2 (50-134)||(11188545-11188629)
chr2 (31-134)||(12342109-12342213)
chr2 (31-150)||(32228044-32228164)
chr2 (26-150)||(36685769-36685893)
chr2 (31-82)||(33055959-33056010)
chr2 (24-121)||(42004920-42005018)
chr2 (31-124)||(43480903-43480997)
chr2 (31-150)||(4288744-4288864)
chr2 (31-150)||(6220437-6220557)
chr2 (31-95)||(7872810-7872874)
chr2 (44-144)||(34454996-34455096)
chr2 (31-82)||(7042220-7042271)
chr2 (26-134)||(1423207-1423317)
chr2 (88-150)||(17703019-17703081)
chr2 (60-134)||(27964433-27964507)
chr2 (106-150)||(28072567-28072611)
[»] chr1 (40 HSPs)
chr1 (31-134)||(27209005-27209108)
chr1 (31-134)||(29567912-29568015)
chr1 (31-150)||(49900788-49900909)
chr1 (31-150)||(15823034-15823154)
chr1 (31-125)||(33622396-33622491)
chr1 (31-150)||(46554798-46554917)
chr1 (31-150)||(26595101-26595220)
chr1 (31-150)||(2610864-2610981)
chr1 (31-134)||(32806969-32807073)
chr1 (31-134)||(46286849-46286953)
chr1 (31-150)||(7191238-7191358)
chr1 (31-150)||(9915443-9915563)
chr1 (31-131)||(25560904-25561004)
chr1 (31-134)||(31491801-31491905)
chr1 (39-134)||(35847972-35848068)
chr1 (31-134)||(46045989-46046093)
chr1 (31-133)||(34110544-34110647)
chr1 (31-133)||(49468742-49468845)
chr1 (44-134)||(16757239-16757329)
chr1 (42-95)||(5034-5087)
chr1 (26-150)||(18794568-18794692)
chr1 (31-134)||(5463591-5463695)
chr1 (31-134)||(10842796-10842900)
chr1 (31-150)||(48009010-48009130)
chr1 (31-150)||(44108599-44108721)
chr1 (43-149)||(25487089-25487195)
chr1 (31-134)||(50094245-50094350)
chr1 (31-131)||(52125167-52125268)
chr1 (31-95)||(8895047-8895111)
chr1 (106-150)||(30292940-30292984)
chr1 (31-134)||(43759348-43759452)
chr1 (31-134)||(48025285-48025389)
chr1 (75-150)||(1740717-1740792)
chr1 (71-150)||(13408337-13408416)
chr1 (75-149)||(24884416-24884490)
chr1 (44-134)||(50249326-50249416)
chr1 (31-134)||(31798605-31798710)
chr1 (31-95)||(8989671-8989735)
chr1 (106-134)||(15573623-15573651)
chr1 (31-155)||(31699321-31699444)
[»] chr4 (46 HSPs)
chr4 (31-150)||(29519562-29519682)
chr4 (31-150)||(34413584-34413704)
chr4 (31-150)||(50203076-50203193)
chr4 (31-134)||(52957827-52957931)
chr4 (31-134)||(30261275-30261378)
chr4 (31-149)||(34316223-34316342)
chr4 (31-133)||(47817755-47817858)
chr4 (31-134)||(1819578-1819682)
chr4 (31-149)||(29370604-29370723)
chr4 (31-150)||(45043625-45043745)
chr4 (31-134)||(45839653-45839757)
chr4 (31-134)||(49080514-49080617)
chr4 (31-150)||(52848091-52848211)
chr4 (31-149)||(6991300-6991417)
chr4 (61-150)||(41496205-41496294)
chr4 (31-134)||(8971058-8971162)
chr4 (31-127)||(10573192-10573288)
chr4 (31-134)||(19878664-19878768)
chr4 (31-134)||(20448055-20448159)
chr4 (31-150)||(41920346-41920466)
chr4 (31-150)||(44571902-44572022)
chr4 (31-134)||(53814534-53814638)
chr4 (31-133)||(11364243-11364345)
chr4 (31-134)||(19451242-19451352)
chr4 (31-130)||(37654429-37654529)
chr4 (31-126)||(38991798-38991894)
chr4 (31-134)||(49089480-49089583)
chr4 (31-149)||(56373612-56373733)
chr4 (31-150)||(56460083-56460205)
chr4 (44-150)||(25231175-25231281)
chr4 (44-150)||(37624556-37624662)
chr4 (31-127)||(50623106-50623204)
chr4 (44-133)||(21864434-21864523)
chr4 (44-133)||(21920295-21920384)
chr4 (31-96)||(47458424-47458488)
chr4 (31-134)||(19930730-19930834)
chr4 (31-131)||(25123764-25123864)
chr4 (44-132)||(52915593-52915681)
chr4 (60-134)||(27943612-27943687)
chr4 (44-127)||(38510296-38510379)
chr4 (44-150)||(22220410-22220516)
chr4 (31-96)||(42605626-42605692)
chr4 (31-121)||(24940908-24941000)
chr4 (31-82)||(30780057-30780109)
chr4 (31-134)||(40345384-40345488)
chr4 (31-150)||(54042220-54042340)
[»] chr8 (31 HSPs)
chr8 (31-134)||(6374430-6374532)
chr8 (31-150)||(9812173-9812292)
chr8 (31-134)||(39463275-39463378)
chr8 (31-150)||(4989478-4989598)
chr8 (31-131)||(45358928-45359028)
chr8 (31-150)||(31693655-31693774)
chr8 (31-150)||(17920956-17921077)
chr8 (31-134)||(40228590-40228694)
chr8 (31-150)||(43448716-43448836)
chr8 (31-150)||(44713534-44713654)
chr8 (31-82)||(40399911-40399962)
chr8 (32-149)||(43084661-43084779)
chr8 (31-134)||(31233973-31234076)
chr8 (31-82)||(13367982-13368033)
chr8 (31-150)||(4760592-4760711)
chr8 (31-134)||(31899281-31899385)
chr8 (31-134)||(39698699-39698803)
chr8 (31-149)||(514875-514996)
chr8 (31-149)||(34156535-34156654)
chr8 (31-82)||(42179163-42179214)
chr8 (60-150)||(6116068-6116158)
chr8 (31-148)||(29312224-29312344)
chr8 (31-134)||(7839474-7839578)
chr8 (31-134)||(15227583-15227689)
chr8 (106-150)||(40362435-40362479)
chr8 (43-134)||(5295452-5295543)
chr8 (31-144)||(19438242-19438357)
chr8 (31-121)||(19574416-19574507)
chr8 (31-70)||(41679392-41679431)
chr8 (44-150)||(37559580-37559686)
chr8 (106-134)||(39765968-39765996)
[»] chr7 (41 HSPs)
chr7 (33-150)||(19105035-19105152)
chr7 (31-150)||(27935767-27935887)
chr7 (31-122)||(8293100-8293191)
chr7 (31-150)||(31418544-31418664)
chr7 (31-150)||(33939765-33939885)
chr7 (31-134)||(40339475-40339578)
chr7 (31-131)||(40753461-40753560)
chr7 (31-145)||(28289220-28289334)
chr7 (31-145)||(29636258-29636373)
chr7 (31-145)||(21752143-21752257)
chr7 (31-147)||(27947532-27947649)
chr7 (31-134)||(1742007-1742111)
chr7 (31-150)||(13405158-13405278)
chr7 (31-150)||(35777819-35777939)
chr7 (38-149)||(30312459-30312570)
chr7 (26-82)||(7759328-7759385)
chr7 (49-149)||(10476137-10476237)
chr7 (31-131)||(21819303-21819402)
chr7 (106-150)||(32501856-32501900)
chr7 (31-134)||(42879965-42880069)
chr7 (31-134)||(24133162-24133265)
chr7 (31-131)||(29530966-29531067)
chr7 (31-134)||(37490800-37490907)
chr7 (31-134)||(44453151-44453253)
chr7 (31-134)||(22298012-22298116)
chr7 (31-150)||(24680128-24680248)
chr7 (31-134)||(45948661-45948765)
chr7 (31-134)||(48684739-48684843)
chr7 (31-150)||(48843552-48843672)
chr7 (31-130)||(1031175-1031274)
chr7 (39-134)||(8603991-8604086)
chr7 (44-150)||(44567086-44567192)
chr7 (89-150)||(10599213-10599274)
chr7 (44-149)||(25440873-25440978)
chr7 (37-82)||(31196638-31196683)
chr7 (31-150)||(36807935-36808054)
chr7 (31-82)||(42753775-42753824)
chr7 (31-69)||(37815806-37815844)
chr7 (44-149)||(31929905-31930010)
chr7 (108-149)||(39557323-39557364)
chr7 (110-150)||(45933695-45933735)
[»] scaffold0182 (1 HSPs)
scaffold0182 (31-131)||(18288-18388)
[»] scaffold0294 (1 HSPs)
scaffold0294 (31-134)||(3537-3641)
[»] scaffold0026 (1 HSPs)
scaffold0026 (31-131)||(4160-4260)
[»] scaffold0502 (1 HSPs)
scaffold0502 (31-149)||(605-723)
[»] scaffold0565 (1 HSPs)
scaffold0565 (31-150)||(9675-9794)
[»] scaffold0110 (1 HSPs)
scaffold0110 (31-134)||(24773-24877)
[»] scaffold0983 (1 HSPs)
scaffold0983 (31-134)||(720-823)
[»] scaffold0332 (1 HSPs)
scaffold0332 (44-134)||(3857-3947)
[»] scaffold0048 (1 HSPs)
scaffold0048 (31-134)||(62649-62753)


Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 31 - 242
Target Start/End: Original strand, 7748931 - 7749142
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||||||| |||||  |||||||| ||||||||||| |||||||||  |||||||| ||||||||| ||||||||||||||    
T  7748931 ttttcattaaagaaaaaataatactttgaaagttatgtatatagtattaattaaatgatacaattaaaaatatacggttattattacattgaaaactgaa 7749030  T
Q  131 agtggtatttattttaaaacgaagagagtattttataaccataatcgtatttcagagataattagcacatacttgattgttattgaacatgaacctaaac 230  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  7749031 agtggtatttattttaaaatgaagggagtattttataaccataatcgtatttcagagataattagcacatacttgattgttattgaacatgcgtctaaac 7749130  T
Q  231 ctattttatatt 242  Q
    ||||||||||||    
T  7749131 ctattttatatt 7749142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 11977705 - 11977604
Alignment:
Q  33 ttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaag 132  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||||||| |||||||||| ||| | | ||||||||| | |||| ||||||||||    
T  11977705 ttcattaaagaaaaaataatactttggaagtagtgtatataatattaattaaaggatacaattgaaaagaaaaagttattatggtattggaaactgaaag 11977606  T
Q  133 tg 134  Q
    ||    
T  11977605 tg 11977604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 7721208 - 7721096
Alignment:
Q  37 ttaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggt 136  Q
    ||||||||||| ||||||||| |||||| ||||||||||||| ||| || ||||||||| |||| | | |||||||||||||||||||||  |||||| |    
T  7721208 ttaaagaaaaaataatactttgaaagtaatgtatataatattgattgaatgatacaatt-gaaaaaaaaagttattattgcattgaaaacataaagtgat 7721110  T
Q  137 atttattttaaaac 150  Q
    ||| ||||| ||||    
T  7721109 attcattttgaaac 7721096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 4630971 - 4630866
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||  ||||||||| || | ||||||||  | |||||||||| ||| | | ||||||||||| |||||||||||||||||  |||||||    
T  4630971 aaaagtaatactttggaagtagtgtgtaaagtattaattggaggatacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgacatttatt 4630872  T
Q  144 ttaaaa 149  Q
    ||||||    
T  4630871 ttaaaa 4630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 14620527 - 14620631
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||| ||||||||| |||||||||  ||||||||||  |||||||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  14620527 ttttcatcaaagaaaaaataatactttggaagtagtgtaacataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaactga 14620626  T
Q  130 aagtg 134  Q
    |||||    
T  14620627 aagtg 14620631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 39566303 - 39566183
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||| ||| |||||||||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  39566303 ttttcattaaagagaaaataatactttggaagtagtgtaacatattattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 39566204  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  39566203 aagtgacattcattttaaaac 39566183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 6519097 - 6518994
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||  ||||||||| |||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||||||||||    
T  6519097 ttttcattaaagaaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactg 6518998  T
Q  129 aaag 132  Q
    ||||    
T  6518997 aaag 6518994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 38369991 - 38369873
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||  ||||| ||||||||| |||||||||||||||||||||||| ||   |||||||  ||| | | |||||||||||||||| ||| | ||    
T  38369991 ttttcattaataaaaaaataatactttgaaagtagtgtatataatattaattgaagagtacaatttaaaagaaaaagttattattgcattggaaa-taaa 38369893  T
Q  131 agtggtatttattttaaaac 150  Q
    |||| |||| ||||||||||    
T  38369892 agtgatattcattttaaaac 38369873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 26660874 - 26660755
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||| || ||||||| ||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||||||| |||    
T  26660874 ttttcattaaagaaaaa-taatactctagaagtagtataacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaattga 26660776  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  26660775 aagtgacattcattttaaaac 26660755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 26932467 - 26932348
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||| || ||||||| ||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||||||| |||    
T  26932467 ttttcattaaagaaaaa-taatactctagaagtagtataacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaattga 26932369  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  26932368 aagtgacattcattttaaaac 26932348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 3306042 - 3306161
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | | | |||||||| || | |||||||| ||| | | | |||||||||||||| |||||||    
T  3306042 ttttcattaaagaaaaaataatactttggaagtagtgtaacagagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactga 3306141  T
Q  130 aagtggtatttattttaaaa 149  Q
    |||||  ||| |||||||||    
T  3306142 aagtgacattcattttaaaa 3306161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 15167045 - 15167147
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| |||  |||||||||||||| || ||||| ||   || ||||| ||| | | |||||||||||||||||||||||||    
T  15167045 ttttcattaaagaaaaaataatattttggaagtagtgtatatagtaataattgaagagtaaaattgaaaaaaaa-agttattattgcattgaaaactgaa 15167143  T
Q  131 agtg 134  Q
    ||||    
T  15167144 agtg 15167147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 38362171 - 38362274
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| |||||||||||||||||| |||| | |||||||| |  | || ||||| |||   | |||||||||||||||||||| ||||    
T  38362171 tttttattaaagaaaaaataatactttaaaagtagtatataaagtattaatttatgggtataattgaaaaggaaaagttattattgcattgaaaattgaa 38362270  T
Q  131 agtg 134  Q
    ||||    
T  38362271 agtg 38362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 7736493 - 7736447
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatat 77  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  7736493 ttttcattaaagaaaaaataatactttgaaagtagtgtatataatat 7736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 35765947 - 35766037
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||||||||| || |||||| || | ||||||||  ||| |||||||| ||| | | ||||||||||| |||||||||||||||||    
T  35765947 aaaagtaatactttagaattagtgtgtagagtattaattggacggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtg 35766037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 28591660 - 28591725
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattg 96  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||| ||||||||||| | ||||||||    
T  28591660 ttttcattaaagaaaaaataattttttaaaaatagtgtatatagtattaattaaaaggtacaattg 28591725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 34446060 - 34446161
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||| | |  |||||||||| ||||||||||||    
T  34446060 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaatgttattattgtattgaaaactga 34446159  T
Q  130 aa 131  Q
    ||    
T  34446160 aa 34446161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 39504831 - 39504722
Alignment:
Q  43 aaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttatt-attgcattgaaaactgaaagtggtattt 140  Q
    ||||| ||||| |||  ||||||||||  ||||||||||||||| |||||||||| ||| | | ||||||| ||||||||| ||||||||||||  |||     
T  39504831 aaaaaataatattttggaagtagtgtaacataatattaattaaaggatacaattgaaaagaaaaagttattaattgcattggaaactgaaagtgacattc 39504732  T
Q  141 attttaaaac 150  Q
    ||||||||||    
T  39504731 attttaaaac 39504722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 2729819 - 2729923
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| | |||||| || | |||||||| ||| | | |||||||||||||||| ||| |||    
T  2729819 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagttttaattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtga 2729918  T
Q  130 aagtg 134  Q
    |||||    
T  2729919 aagtg 2729923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 24281209 - 24281098
Alignment:
Q  37 ttaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggt 136  Q
    ||||||||||| ||||||||| |||||| ||| |||| ||||||||||| | |||||||| ||  | | | |||||| |||||| |||||| |||||| |    
T  24281209 ttaaagaaaaaataatactttgaaagtattgtgtatagtattaattaaatg-tacaattgaaatgaaaaaattattagtgcattaaaaactaaaagtgat 24281111  T
Q  137 atttattttaaaa 149  Q
    ||| |||||||||    
T  24281110 attcattttaaaa 24281098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 24381002 - 24381113
Alignment:
Q  37 ttaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggt 136  Q
    ||||||||||| ||||||||| |||||| ||| |||| ||||||||||| | |||||||| ||  | | | |||||| |||||| |||||| |||||| |    
T  24381002 ttaaagaaaaaataatactttgaaagtattgtgtatagtattaattaaatg-tacaattgaaatgaaaaaattattagtgcattaaaaactaaaagtgat 24381100  T
Q  137 atttattttaaaa 149  Q
    ||| |||||||||    
T  24381101 attcattttaaaa 24381113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 42104096 - 42104200
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||| ||  ||||||||||  ||| |||||||| || | || ||||| ||| | | |||||||||||||||| |||||||    
T  42104096 ttttcattaaagaaaaaataataccttggaagtagtgtaacatagtattaattgaagggtaaaattgaaaagaaaaagttattattgcattggaaactga 42104195  T
Q  130 aagtg 134  Q
    |||||    
T  42104196 aagtg 42104200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 14161934 - 14161985
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  14161934 ttttcattaaagaaaaaataatactttggaagtagtgtatatagtattaatt 14161985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 27797897 - 27797782
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  ||||| |  ||||| |||||| | || | |||||||| ||| | | |||||||||||||||| ||||||||    
T  27797897 ttttcattaaagaaaaa-taatactttggaagtaat--atatagtattaactgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaa 27797801  T
Q  131 agtggtatttattttaaaa 149  Q
    ||||  ||| |||||||||    
T  27797800 agtgacattcattttaaaa 27797782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 42978176 - 42978219
Alignment:
Q  107 gttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  42978176 gttattattgcattgaaaactgaaagtgatattcattttaaaac 42978219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 4425094 - 4424977
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| ||||| |||||||| || | |||||||| ||| |   |  |||| ||  ||||||||| ||    
T  4425094 ttttcattaaagaaaaaataatactttggaagtagtgtaatatagtattaattgaaaggtacaattgaaaaga---aaatattgttttattgaaaaccga 4424998  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||||||||||||||    
T  4424997 aagtgatatttattttaaaac 4424977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 36165006 - 36164888
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||| |||  ||||| |||||||| |||||||| || | || ||||| ||| | | |||||||| ||||||| ||||||||    
T  36165006 tttttattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaagggtataattgaaaagaaaaagttattactgcattggaaactgaa 36164907  T
Q  131 agtggtatttattttaaaa 149  Q
    | ||  ||| |||||||||    
T  36164906 aatgacattcattttaaaa 36164888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 14006012 - 14005911
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||| ||  ||||||||| | ||| |||||||| || |||| ||||  ||| | | |||||||||||||||| |||||||    
T  14006012 ttttcattaaagaaaaaataataccttggaagtagtgtaacatagtattaattgaaggataaaattaaaaagaaaaagttattattgcattggaaactga 14005913  T
Q  130 aa 131  Q
    ||    
T  14005912 aa 14005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 21375683 - 21375804
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||  || |||||| |||||||||||  ||| |||||||| || | |||||||| ||| | | |   ||| |||||||||||||||    
T  21375683 ttttcattaaagaaaaaaatattactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaaaaaaaaaaatttttgcattgaaaactg 21375782  T
Q  129 aaagtggtatttattttaaaac 150  Q
    ||||||  ||||||||||||||    
T  21375783 aaagtgacatttattttaaaac 21375804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 34208921 - 34209017
Alignment:
Q  26 gtttgttttcattaaag-aaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcatt 120  Q
    ||||||||||||||||| ||||| ||||| |||  ||||||||| |||||||||||||| || | || ||||| ||| | | |||||||||||||||    
T  34208921 gtttgttttcattaaagaaaaaaataatattttggaagtagtgtaatataatattaattgaagggtataattgaaaaaaaaaagttattattgcatt 34209017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 36073698 - 36073758
Alignment:
Q  65 gtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaa 125  Q
    |||||| ||||||||||| || |||||||||| ||| | | ||||||||||||||||||||    
T  36073698 gtgtatttaatattaattgaatgatacaattgaaaagaaaaagttattattgcattgaaaa 36073758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 843143 - 843072
Alignment:
Q  26 gtttgttt-tcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattg 96  Q
    |||||||| |||||||||||||| ||| |||||  |||||||||||| |||||||||| || | ||||||||    
T  843143 gtttgtttctcattaaagaaaaaataacacttttgaagtagtgtatacaatattaattgaatggtacaattg 843072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 7579935 - 7580022
Alignment:
Q  63 tagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||||| |||||||||| ||   |||||||| ||| | | ||||||||||| ||||||||||||||||   ||| ||||||||||    
T  7579935 tagtgtatacaatattaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtaacattcattttaaaac 7580022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 13761668 - 13761573
Alignment:
Q  40 aagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    |||||||| |||||||||  ||||||||||  ||| |||||||| || | |||||||| ||| | | | |||||||||||||||||| ||||||||    
T  13761668 aagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattgaaaagtgaaagtg 13761573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 13974401 - 13974302
Alignment:
Q  24 ttgtttgttttc-attaaagaaaaa-gtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattg 121  Q
    |||||||||||| |||||||||||| |||||| |||  ||||||  ||||||||| ||||| || | |||||||| ||| ||| | ||||||||||||||    
T  13974401 ttgtttgttttccattaaagaaaaaagtaatattttggaagtagcatatataataataattgaatggtacaattgaaaagataaaattattattgcattg 13974302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 21634230 - 21634180
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||||||    
T  21634230 ttttcattaaagaaaaa-taatattttggaagtagtgtatataatattaatt 21634180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 21642477 - 21642427
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||||||    
T  21642477 ttttcattaaagaaaaa-taatattttggaagtagtgtatataatattaatt 21642427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 10344979 - 10345069
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||||||||  |||||||||  | | ||||||||  | | |||||||| ||| | | |||||||||||||||| ||||||||||||    
T  10344979 aaaagtaatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtg 10345069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 27600480 - 27600399
Alignment:
Q  69 atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||| |||||||| || | || ||||| ||| | | |||||||||||||||| ||||||||||   |||||||||||||||    
T  27600480 atatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagcaatatttattttaaaac 27600399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 1309395 - 1309443
Alignment:
Q  34 tcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    |||||||||||||| |||||  ||  |||||||||||||||||||||||    
T  1309395 tcattaaagaaaaaataatatgttgtaagtagtgtatataatattaatt 1309443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 21195474 - 21195402
Alignment:
Q  55 tttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    |||| |||||||||||||| |||||||| || | |||||||| ||| | | | |||||||||||||| |||||    
T  21195474 tttagaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaact 21195402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 18737121 - 18737243
Alignment:
Q  31 ttttcattaaagaaaaagtaata---ctttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||||||||||||| | || ||||| ||| | | |||||||||||||||| |||||    
T  18737121 ttttcattaaagaaaaaataatagtactttaaaagtagtgtatataatattaattaaagggtataattgaaaagaaagagttattattgcattggaaact 18737220  T
Q  128 gaaagtggtatttattttaaaac 150  Q
    |||||||  ||| ||||||||||    
T  18737221 gaaagtgacattcattttaaaac 18737243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 577181 - 577061
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  ||||| |||  ||||||||||||||||||||||| || | || ||||| ||  ||| ||||||||||||||||||||||||    
T  577181 ttttcattaaagaaaaaaataataatttggaagtagtgtatataatattaattgaagggtataattgaaatgataaagttattattgcattgaaaactga 577082  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| || ||||||||||||    
T  577081 aagtgatagttattttaaaac 577061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 9940767 - 9940664
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| |||  ||||||||| ||||||||||||| || | |||||||| |||   | |||||||||||||||||||||||||    
T  9940767 ttttcattaaagaaaaaataatattttggaagtagtgtgtataatattaattgaagggtacaattgaaaaagaaaagttattattgcattgaaaactgaa 9940668  T
Q  131 agtg 134  Q
    ||||    
T  9940667 agtg 9940664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 32193827 - 32193702
Alignment:
Q  26 gtttgtttt-cattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaa 124  Q
    ||||||||| ||||||||||||  |||||||||  |||||||||||||| |||||||| || | |||||||| ||| | | | |||||||||||||  ||    
T  32193827 gtttgttttacattaaagaaaagataatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattagaa 32193728  T
Q  125 actgaaagtggtatttattttaaaac 150  Q
    ||| ||||||  ||||||||||||||    
T  32193727 actaaaagtgacatttattttaaaac 32193702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 234154 - 234050
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||||| |    
T  234154 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaa 234055  T
Q  130 aagtg 134  Q
    |||||    
T  234054 aagtg 234050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 3988777 - 3988894
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  || |||| |||||| |||||||| || | || ||||| ||| | | | |||||||||||||| ||||||||    
T  3988777 ttttcattaaagaaaaaataatacttttgaaatagtatatatagtattaattgaagggtataattgaaaagaaaaaattattattgcattggaaactgaa 3988876  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||||||||| ||||    
T  3988877 agtg--atttattttgaaac 3988894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 17267653 - 17267733
Alignment:
Q  43 aaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaa 123  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| | |||| ||| ||| | | | ||||||||||||||||    
T  17267653 aaaaaataatactttaaaaatagtgtatataatattaattaaagggtacagttgaaaagaaaaaattattattgcattgaa 17267733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 17828402 - 17828351
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  17828402 ttttcattaaagaaaaagtaatactttgaaagaagtgtatatagtattaatt 17828351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 29713439 - 29713540
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||| |||||||||||| ||||||||| |||||||||| | ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||| ||    
T  29713439 tttttattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaacgga 29713538  T
Q  130 aa 131  Q
    ||    
T  29713539 aa 29713540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 24163747 - 24163867
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||| | |||||||||  ||||||||||  ||| |||||||| ||   |||||||| ||| | | | |||||||||||||| |||||||    
T  24163747 ttttcattaaagaaataataatactttggaagtagtgtaacatagtattaattgaaatgtacaattgaaaagaaaaaattattattgcattggaaactga 24163846  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  24163847 aagtgacattcattttaaaac 24163867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 16128040 - 16128091
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  16128040 ttttcattaaagaaaaaataatacttttgaagtagtgtatatagtattaatt 16128091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 23259358 - 23259459
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||| |||||||||| |||||||||  ||||||||||  |||||||||||| || | |||||||| |||   | ||||||| |||||||| |||||||    
T  23259358 ttttcactaaagaaaaaataatactttggaagtagtgtaacataatattaatttaagggtacaattgaaaagtaaaagttatttttgcattggaaactga 23259457  T
Q  130 aa 131  Q
    ||    
T  23259458 aa 23259459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 10540509 - 10540572
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaa 93  Q
    ||||||||||||||||| |||||||||  ||||||||| ||||| |||||||| || |||||||    
T  10540509 ttttcattaaagaaaaaataatactttggaagtagtgtaatatagtattaattgaaggatacaa 10540572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 19600540 - 19600437
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||| |||  |||||| |||| ||| |||||||||| ||||||| || | | | | | |||||||||||| ||||||| ||    
T  19600540 tttttattaaagaaaaaataatattttggaagtagcgtatctaacattaattaaaagatacaaatgaagagaaaaaattattattgcatagaaaacttaa 19600441  T
Q  131 agtg 134  Q
    ||||    
T  19600440 agtg 19600437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 13011381 - 13011434
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacg 87  Q
    |||||||||||||||||   ||||||| ||||||||||||||| |||||||| ||||    
T  13011381 ttttcattaaagaaaaa---atactttgaaagtagtgtatatagtattaattgaacg 13011434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 19675098 - 19674999
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  || |||||| |||||||| |  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  19675098 ttttcattaaagaaaaa--aaaactttagaagtagtgcaacatagtattaattgaatggtacaattgaaaagaaaaagttattattgcattggaaactga 19675001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 34513677 - 34513739
Alignment:
Q  71 ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagt 133  Q
    |||| ||||||| || |||||||||| ||| | | |||||||||||||||| |||||||||||    
T  34513677 ataacattaattgaaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagt 34513739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 10520716 - 10520792
Alignment:
Q  74 atattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||||| || | |||||||| ||| | | | ||||||||| |||||||| ||||||||  ||||||||||||||    
T  10520716 atattaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaattgaaagtgacatttattttaaaac 10520792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 36844773 - 36844876
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||  |||||||||  ||||||||||||||||||||||| || |||||||||| ||| | | | |||||||||||||||||||||||    
T  36844773 ttttcattaaagaaaacataatactttggaagtagtgtatataatattaattgaatgatacaattgaaaagaaaaaattattattgcattgaaaactgaa 36844872  T
Q  131 agtg 134  Q
    ||||    
T  36844873 agtg 36844876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 45213752 - 45213872
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||| |||||||| || | |||||||| ||| | | |||||||||||||||  |||||||    
T  45213752 ttttcattaaagaaaaaataatactttgaaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactga 45213851  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  45213852 aagtgacattcattttaaaac 45213872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 19373705 - 19373602
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||| |||||  ||||||||||||| ||||||||| || | |||||||| ||||| | |||||||||| ||||||||| ||||    
T  19373705 ttttcattaaagaaaaaataaaactttggaagtagtgtatatgatattaattgaagggtacaattgaaaataaaaagttattatttcattgaaaattgaa 19373606  T
Q  131 agtg 134  Q
    ||||    
T  19373605 agtg 19373602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 22857209 - 22857090
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||| |||| ||||||||||||||||||||||| |||  |||||||| ||| | | |||||||||| |||||||||  |||    
T  22857209 tttttattaaagaaaaaataatattttagaagtagtgtatataatattaattgaacagtacaattgaaaagaaaaagttattattacattgaaaatcgaa 22857110  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||| ||||||||||    
T  22857109 agtgacattcattttaaaac 22857090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 30431240 - 30431136
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta-tataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||| ||||||| |||||||||  |||||||||| ||||||||||||| || | |||||||| ||| | | | ||||||||||||||||||||||    
T  30431240 ttttcattagagaaaaaataatactttggaagtagtgtaatataatattaattgaaggttacaattgaaaagaaaaaattattattgcattgaaaactga 30431141  T
Q  130 aagtg 134  Q
    |||||    
T  30431140 aagtg 30431136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 50646154 - 50646260
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||| |||||||||  ||||| |||||||| ||||||||||| | |||||||| ||| | | |||||||||||||||| ||||||||||||  |||||||    
T  50646154 aaaaataatacttttgaagtaatgtatatagtattaattaaatggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttatt 50646253  T
Q  144 ttaaaac 150  Q
    || ||||    
T  50646254 ttgaaac 50646260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 33194061 - 33194181
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||| ||||  |||||||||||| || | |||||||  ||||| | |||||| ||||||||| |||||||    
T  33194061 ttttcattaaagaaaaaataatactttggaagtaatgtaacataatattaattgaagggtacaattaaaaataaaaagttatcattgcattggaaactga 33194160  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  33194161 aagtgacattcattttaaaac 33194181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 35557788 - 35557908
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||||  ||| || ||||| || | |||||||| ||| | | | |||||||||||||| |||||||    
T  35557788 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtaataattgaaaggtacaattgaaaagaaaaaattattattgcattggaaactga 35557887  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| ||| |||||||||||    
T  35557888 aagtgatatatattttaaaac 35557908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 53200711 - 53200830
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||| |||||| || |||||| |||||||||||  |||||||||||| || | |||||||| ||| | | |||||||||||||||||||||| |    
T  53200711 ttttcattaaggaaaaaatagtactttgaaagtagtgtaacataatattaattgaatg-tacaattgaaaagaaaaagttattattgcattgaaaactaa 53200809  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  53200810 aagtgacattcattttaaaac 53200830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 40487940 - 40487857
Alignment:
Q  38 taaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattg 121  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| || | |||||||| ||| | | ||||||||||||||||    
T  40487940 taaagaaaaaataatactttagaagtagtgtatatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattg 40487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 9189466 - 9189584
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||| |||  ||||| |||||||| |||||||| || |||| | ||| ||| | | |||||||||| ||||||||||||||    
T  9189466 tttttattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaatgatatatttgaaaagaaaaagttattatttcattgaaaactgaa 9189565  T
Q  131 agtggtatttattttaaaa 149  Q
    ||||  ||| |||||||||    
T  9189566 agtgacattcattttaaaa 9189584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 30934840 - 30934938
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||| ||| |||||||||| |||||||||||||| |||||||| |  | |||||||| ||| | | | |||||||||||||| |||||||    
T  30934840 ttttcattaaagataaaataatactttagaagtagtgtatatagtattaattgaggggtacaattgaaaagaaaaaattattattgcattggaaactga 30934938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 50038215 - 50038321
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||| |||||||||  | | ||||||||  | | |||||||| ||| | | |||||||||||||||||||||||||||||  ||| |||    
T  50038215 aaaagtaatactttagaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatt 50038314  T
Q  144 ttaaaac 150  Q
    |||||||    
T  50038315 ttaaaac 50038321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 42072109 - 42072008
Alignment:
Q  27 tttgttttc-attaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaa 125  Q
    ||||||||| |||||||||||  |||||||||| ||||| ||||||||||||||||| || | |||| ||| ||| | | |||||||||||||||| |||    
T  42072109 tttgttttccattaaagaaaacataatactttagaagtaatgtatataatattaattgaagggtacagttgaaaagaaaaagttattattgcattggaaa 42072010  T
Q  126 ct 127  Q
    ||    
T  42072009 ct 42072008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 3152811 - 3152940
Alignment:
Q  10 attattctaatcaatt----gtttgttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatata 104  Q
    ||||||||||||||||    ||||||||| |||||||||||   |||| |||  ||||||||||  ||| |||||||| || | |||||||| ||| | |    
T  3152811 attattctaatcaattattggtttgtttttattaaagaaaataaaatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaa 3152910  T
Q  105 cagttattattgcattgaaaactgaaagtg 134  Q
     |||||||||||||||||||||||||||||    
T  3152911 aagttattattgcattgaaaactgaaagtg 3152940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 36460925 - 36460806
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||| ||||||||| |||||||||  ||||||| ||  |||||||||||| || | | |||||| ||| | | ||||||||||||||||||||||||    
T  36460925 ttttcatcaaagaaaaa-taatactttggaagtagtataacataatattaattgaagggtgcaattgaaaagaaaaagttattattgcattgaaaactga 36460827  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||| ||||| ||||    
T  36460826 aagtgatattcattttgaaac 36460806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 38016494 - 38016391
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  38016494 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaa-ggtacaattgaaaagaaaaagttattattgcattggaaactga 38016396  T
Q  130 aagtg 134  Q
    |||||    
T  38016395 aagtg 38016391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 48901839 - 48901739
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||||| | ||| ||||||||||| ||||||||  | | |||||||| ||| | | |||||||||||||||| ||||||||    
T  48901839 ttttaattaaagaaaaaataatactatgaaattagtgtatatagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaa 48901740  T
Q  131 a 131  Q
    |    
T  48901739 a 48901739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 48903405 - 48903305
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||||| | ||| ||||||||||| ||||||||  | | |||||||| ||| | | |||||||||||||||| ||||||||    
T  48903405 ttttaattaaagaaaaaataatactatgaaattagtgtatatagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaa 48903306  T
Q  131 a 131  Q
    |    
T  48903305 a 48903305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 50088346 - 50088450
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||| |||||||| || | |||||||| ||| | | ||||| |||||||||| ||||| |    
T  50088346 ttttcattaaagaaaaattaatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttactattgcattggaaactaa 50088445  T
Q  130 aagtg 134  Q
    |||||    
T  50088446 aagtg 50088450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 51398130 - 51398010
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||| ||||||||||| |    
T  51398130 ttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattgaaaactaa 51398031  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||||||||| ||||    
T  51398030 aagtgacatttattttgaaac 51398010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 45566919 - 45566824
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta-tataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaa 125  Q
    |||||||||||||||||  |||| |||||||||| |||| |||| |||||||| || |||||||||| ||| | | ||||||||||| ||||||||    
T  45566919 ttttcattaaagaaaaaacaatattttaaaagtaatgtaatatagtattaattgaatgatacaattgaaaagaaaaagttattattgtattgaaaa 45566824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 4759089 - 4758991
Alignment:
Q  52 tactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||||||  | | |||||||| || | |||||||| ||| | | |||||||||||||||| ||| ||||||||  ||||||||||||||    
T  4759089 tactttaaaagtagtgtgcagagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacatttattttaaaac 4758991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 30315429 - 30315325
Alignment:
Q  31 ttttcattaaagaaaaagtaatac-tttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||| |||||||| || | || ||||  ||| | | ||||||| |||||||| |||| ||    
T  30315429 ttttcattaaagaaaaaataatacttttgaaagtagtgtatatagtattaattgaagggtataattcaaaagaaaaagttattcttgcattggaaacgga 30315330  T
Q  130 aagtg 134  Q
    |||||    
T  30315329 aagtg 30315325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 33024325 - 33024433
Alignment:
Q  27 tttgttttc-attaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaa 124  Q
    ||||||||| ||||||||| || |||||| || |||| ||||||  |||||||||||| || | | |||||| ||| ||| |||||||||||||||| ||    
T  33024325 tttgttttccattaaagaagaaataatacgttgaaagcagtgtaacataatattaattgaatggtgcaattgaaaagataaagttattattgcattggaa 33024424  T
Q  125 actgaaagt 133  Q
    |||||||||    
T  33024425 actgaaagt 33024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 36729840 - 36729944
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||| ||||| |||||||||  ||||| ||||  |||||||||||| || | |||||||| ||| | | |||||||||||||||| ||| |||    
T  36729840 ttttcattaaataaaaaataatactttggaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattga 36729939  T
Q  130 aagtg 134  Q
    |||||    
T  36729940 aagtg 36729944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 8817260 - 8817159
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatata--atattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    ||||||||||||||||| |||||| ||| ||||||||| ||||  |||||||||||| | ||||||| |||  | | | ||||||||||||||| |||||    
T  8817260 ttttcattaaagaaaaaataatacattagaagtagtgtgtataatatattaattaaaaggtacaatt-gaaggaaaaaattattattgcattgataactg 8817162  T
Q  129 aaa 131  Q
    |||    
T  8817161 aaa 8817159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 39356928 - 39356885
Alignment:
Q  107 gttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  39356928 gttattattgcattgaaaactgaaagtgacatttattttaaaac 39356885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 38141095 - 38140966
Alignment:
Q  10 attattctaatcaatt----gtttgtttt-cattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatata 104  Q
    ||||||||||||||||    ||||||||| ||||||||||||| | ||| |||  |||||||||||||| |||||||| || |  |||||   ||| | |    
T  38141095 attattctaatcaattattggtttgtttttcattaaagaaaaaattatattttggaagtagtgtatatagtattaattgaagggcacaatgaaaaaaaaa 38140996  T
Q  105 cagttattattgcattgaaaactgaaagtg 134  Q
      ||||||||||||||| ||||||||||||    
T  38140995 aggttattattgcattggaaactgaaagtg 38140966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 47895374 - 47895478
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  || |||||| | ||| |||||||| || | || ||||| ||| | | |||||||||||||||| ||| |||    
T  47895374 ttttcattaaagaaaaaataatactttggaaatagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaattga 47895473  T
Q  130 aagtg 134  Q
    |||||    
T  47895474 aagtg 47895478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 11393660 - 11393545
Alignment:
Q  36 attaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    |||||||||||| |||||||||  ||||||||||  ||  |||||||| || | |||||||| ||| | | |||||||||||||||| ||| ||||| ||    
T  11393660 attaaagaaaaaataatactttggaagtagtgtaacattgtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattgaaaatg 11393561  T
Q  135 gtatttattttaaaac 150  Q
      ||| ||||||||||    
T  11393560 acattcattttaaaac 11393545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 27067731 - 27067637
Alignment:
Q  26 gtttgttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattg 121  Q
    |||||||||||||||||||||| |||   ||| ||||| |||||| || |||||||| || | |||||||| ||| | | ||||||||||||||||    
T  27067731 gtttgttttcattaaagaaaaa-taaagttttgaaagttgtgtatgtagtattaattgaagggtacaattgaaaagaaaaagttattattgcattg 27067637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 41850469 - 41850390
Alignment:
Q  71 ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||| || | |||||||| ||| | | |||||||||||||||| ||||| ||||||  ||| ||||||||||    
T  41850469 ataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgtcattcattttaaaac 41850390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 47823472 - 47823601
Alignment:
Q  26 gtttgttttc-attaaagaaaaa-gtaatac---tttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcatt 120  Q
    |||||||||| |||||||||||| |||||||   ||| ||| ||||||||||| |||||||| ||  ||||||||  ||| | | | |||||||||||||    
T  47823472 gtttgttttccattaaagaaaaaagtaatacaaatttgaaaatagtgtatatagtattaattgaagaatacaattaaaaagaaaaaattattattgcatt 47823571  T
Q  121 gaaaactgaaagtggtatttattttaaaac 150  Q
     |||||| ||| ||  ||||||||||||||    
T  47823572 aaaaactaaaaatgacatttattttaaaac 47823601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 13756903 - 13756969
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattg 96  Q
    |||| |||||||||||| |||||||||||||||| ||| | |||||||||||| || | ||||||||    
T  13756903 tttttattaaagaaaaaataatactttaaaagtaatgtaacataatattaattgaagggtacaattg 13756969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 39359040 - 39359002
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta 69  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  39359040 ttttcattaaagaaaaaataatactttagaagtagtgta 39359002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 31853593 - 31853630
Alignment:
Q  32 tttcattaaagaaaaagtaatactttaaaagtagtgta 69  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  31853593 tttcattaaagaaaaaataatactttgaaagtagtgta 31853630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 47138024 - 47137963
Alignment:
Q  89 tacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||| ||||| | |||||||||||||||||||||| ||| ||  ||| ||||||||||    
T  47138024 tacaattgaaaataaaaagttattattgcattgaaaactaaaaatgacattcattttaaaac 47137963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 32492211 - 32492315
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataa-tattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||| |||||||||||| ||||| |||  ||||||||||   || |||||||| || | || ||||| ||| | | |||||||||||||||||||| |||    
T  32492211 tttttattaaagaaaaaataatattttggaagtagtgtaacaaagtattaattgaatggtataattgaaaagaaaaagttattattgcattgaaaattga 32492310  T
Q  130 aagtg 134  Q
    |||||    
T  32492311 aagtg 32492315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 18719466 - 18719569
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||| |||||||| || | |||||||| ||| | | |||||||||||||||||||||||||    
T  18719466 ttttcattaaagaaaaaataatactttgaaaatagtgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaa 18719565  T
Q  131 agtg 134  Q
    ||||    
T  18719566 agtg 18719569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 19164474 - 19164376
Alignment:
Q  33 ttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaa 131  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| || |||||||||  ||| | | ||||||||||||||| |||| |||||    
T  19164474 ttcattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaaggatacaattaaaaagaaaaagttattattgcattaaaaattgaaa 19164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 37038803 - 37038919
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||| || | || ||||| ||| | | ||   ||||||||||||||||||||    
T  37038803 ttttcattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaagggtataattgaaaagaaaaag---ttattgcattgaaaactgaa 37038899  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||| ||||||||||    
T  37038900 agtgacattcattttaaaac 37038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 40608639 - 40608753
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||  |||||||| |||| | | |||||||||||||||| ||||||||    
T  40608639 ttttcattaaagaaaaaataatattttaatagtagtgtatataagattaattaaagtatacaatt-gaaagagaaagttattattgcattg-aaactgaa 40608736  T
Q  131 agtggtatttattttaa 147  Q
    ||||  ||| |||||||    
T  40608737 agtgacattcattttaa 40608753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 38926726 - 38926606
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||||  ||| |||||||| || | |||||||| ||| |   ||||||||||||||||||||||||    
T  38926726 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaaaagaagttattattgcattgaaaactga 38926627  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  38926626 aagtgacattcattttaaaac 38926606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 18579286 - 18579183
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| | |||||||  |||||||||||||| |||||||| || | | |||||| ||| | | | |||||||||||||||||||||||    
T  18579286 ttttcattaaagaaaaaattatactttggaagtagtgtatatagtattaattgaagggtgcaattgaaaagaaaaaattattattgcattgaaaactgaa 18579187  T
Q  131 agtg 134  Q
    ||||    
T  18579186 agtg 18579183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 45301871 - 45301765
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||||||||||||||||||||||||| | | |||||||| |  | |||||||| ||| | | |||||||||||||||| ||||||||||||  ||| |||    
T  45301871 aaaagtaatactttaaaagtagtgtacacagtattaattgatgggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatt 45301772  T
Q  144 ttaaaac 150  Q
    |||||||    
T  45301771 ttaaaac 45301765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 11132670 - 11132569
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaat-atacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| ||| |||||| |||||||| ||||||||||| |||||||||| |||| | | ||||||||||| |||  |||||||    
T  11132670 ttttcattaaagaaaaaataatattttgaaagtaatgtatatagtattaattaaaggatacaattgaaaataaaaaagttattattgaatttgaaactga 11132571  T
Q  130 aa 131  Q
    ||    
T  11132570 aa 11132569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 25383518 - 25383618
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  25383518 ttttcattaaagaaatagtaatactttgaaagtagtgtaacataatattaattgaa-ggtacaattgaaaagaaaaagttattattgcattggaaactga 25383616  T
Q  130 aa 131  Q
    ||    
T  25383617 aa 25383618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 12566014 - 12566117
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||| ||| | |||||||  ||| ||||||||||||||||||| || | |||||||| ||| | | | |||||||||||||| ||||||||    
T  12566014 ttttcattaaagacaaaattatactttggaagcagtgtatataatattaattgaatggtacaattgaaaaaaaaaaattattattgcattggaaactgaa 12566113  T
Q  131 agtg 134  Q
    ||||    
T  12566114 agtg 12566117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 29411815 - 29411696
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||| ||| ||||||| ||||| ||| |||||| ||||||||||||||||| || | |||||||  ||| | |  ||||||||||||||||||||| ||    
T  29411815 ttttccttagagaaaaaataatattttgaaagtaatgtatataatattaattgaagggtacaattaaaaagaaaaggttattattgcattgaaaactaaa 29411716  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||| ||||||||||    
T  29411715 agtgacattcattttaaaac 29411696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 35799308 - 35799203
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||||||||||||| ||||||||||  ||||||||||||  | | |||||||| ||| | | |||||||||||||||| ||||||||||||  |||||||    
T  35799308 aaaagtaatactttgaaagtagtgtgcataatattaattggagggtacaattgaaaaaaaa-agttattattgcattggaaactgaaagtgacatttatt 35799210  T
Q  144 ttaaaac 150  Q
    || ||||    
T  35799209 ttgaaac 35799203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 441264 - 441368
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  |||| |||||  ||| |||||||| || | |||||||| ||| | | ||||||||||||||||||||| ||    
T  441264 ttttcattaaagaaaaaataatactttggaagtggtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaacaga 441363  T
Q  130 aagtg 134  Q
    |||||    
T  441364 aagtg 441368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 4469585 - 4469501
Alignment:
Q  66 tgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||||||||||||| || | |||||||| ||| | | ||||||||||| |||||||||||||||||  ||| ||||||||||    
T  4469585 tgtatataatattaatttaagggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgaaattcattttaaaac 4469501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 7028846 - 7028946
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||||||| ||||||||||||||| |||||||| || | |||| ||| ||| | | ||| |||||||||||| ||| ||||    
T  7028846 tttttattaaagaaaaaataatactttgaaagtagtgtatatagtattaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaa 7028945  T
Q  131 a 131  Q
    |    
T  7028946 a 7028946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 8540158 - 8540038
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  ||||| |||| |||||||||| |||||||||||| || | |||||||  ||| | | ||||||||||||| || |||||||    
T  8540158 ttttcattaaagaaaaaaataatattttagaagtagtgtaaataatattaattgaagggtacaattaaaaagaaaaagttattattgcactggaaactga 8540059  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||| ||||||||||    
T  8540058 aaatgtcattcattttaaaac 8540038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 13562114 - 13561994
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||| ||||| |||||||||  ||||||||||  |||| ||||||| || | |||||||| ||| | | |||||||||||||||  |||||||    
T  13562114 ttttcattaaataaaaaataatactttggaagtagtgtaacataacattaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactga 13562015  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||||||||| ||||    
T  13562014 aagtgacatttattttgaaac 13561994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 29396713 - 29396817
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | |||||||||||| || | || ||||| ||| | | |||||||||||||||| |||| ||    
T  29396713 ttttcattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggtataattgaaaagaaaaagttattattgcattggaaaccga 29396812  T
Q  130 aagtg 134  Q
    |||||    
T  29396813 aagtg 29396817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 45081933 - 45082037
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||| ||||  ||||||||||  |||||||||||| || | |||||||| ||| | | | |||||||||||||| |||||||    
T  45081933 ttttcattaaagaaaaaataatgctttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactga 45082032  T
Q  130 aagtg 134  Q
    |||||    
T  45082033 aagtg 45082037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 4658265 - 4658367
Alignment:
Q  31 ttttcattaaagaaaaag--taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||   ||||||||| ||||||||||||||| |||||||| || | |||||||| ||| | | | |||||||| ||||||||| ||    
T  4658265 ttttcattaaagaaaaaaattaatactttgaaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaaattattattacattgaaaaatg 4658364  T
Q  129 aaa 131  Q
    |||    
T  4658365 aaa 4658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 12393952 - 12394057
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtata---taatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||||||||||| || |||||| ||| |||||||||   ||||||||||| || | |||||||  ||||| | |||||||||||||||  |||||    
T  12393952 ttttcattaaagaaaaaatattactttgaaaatagtgtataacataatattaattgaagggtacaattaaaaataaaaagttattattgcattagaaact 12394051  T
Q  128 gaaagt 133  Q
    ||||||    
T  12394052 gaaagt 12394057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 9391614 - 9391692
Alignment:
Q  53 actttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaa 131  Q
    ||||| ||||||||||||||||||||||||||| |  ||||||| ||| | | | ||||||||||||| ||||||||||    
T  9391614 actttgaaagtagtgtatataatattaattaaaggtcacaattgaaaagaaaaaattattattgcattaaaaactgaaa 9391692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 16463079 - 16463180
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||  |||||||||  |   |||||||| || | |||||||| ||| | | |||||||||||||||||||||||||||||  |||||||    
T  16463079 aaaagtaatactttggaagtagtgtgcagggtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacatttatt 16463178  T
Q  144 tt 145  Q
    ||    
T  16463179 tt 16463180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 29808933 - 29808812
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||  |||||||||  ||||||||||  |||||||||| | || | ||| |||| ||| | | |||||| ||||||||||||||||    
T  29808933 ttttcattaaagaaaaaaataatactttggaagtagtgtaacataatattaagtgaagggtacgattgaaaagaaaaagttatgattgcattgaaaactg 29808834  T
Q  129 aaagtggtatttattttaaaac 150  Q
    ||||||  ||| ||||||||||    
T  29808833 aaagtgacattcattttaaaac 29808812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 11188545 - 11188629
Alignment:
Q  50 aatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||  ||||||||||||||  ||||||| || |||||||||| ||| |   ||||||| |||||||||||||||||||||    
T  11188545 aatactttggaagtagtgtatataggattaattgaatgatacaattgaaaaaaataagttattgttgcattgaaaactgaaagtg 11188629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 12342213 - 12342109
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||| ||    
T  12342213 ttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaaccga 12342114  T
Q  130 aagtg 134  Q
    |||||    
T  12342113 aagtg 12342109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 32228044 - 32228164
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||| ||| | ||| |||||||| || | ||||| || ||| | | ||||||||||||||| |||||  |    
T  32228044 ttttcattaaagaaaaaataatactttgaaagtattgtaacatagtattaattgaagggtacaactgaaaagaaaaagttattattgcatttaaaaccaa 32228143  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  32228144 aagtgacattcattttaaaac 32228164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 36685769 - 36685893
Alignment:
Q  26 gtttgttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaa 125  Q
    |||||||||||| ||||||||| ||||| ||| |||||||||| |||| |||||||| || | |||||||| ||| | | | ||||||||| |||  |||    
T  36685769 gtttgttttcatcaaagaaaaaataatattttcaaagtagtgtttatagtattaattgaagggtacaattgaaaagaaaaaattattattgtatttgaaa 36685868  T
Q  126 ctgaaagtggtatttattttaaaac 150  Q
     |||||||   ||| ||||||||||    
T  36685869 ttgaaagtaacattcattttaaaac 36685893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 33056010 - 33055959
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| |||||| || ||||||||||||||| ||||||||    
T  33056010 ttttcattaaagaaaaaataatacattgaaagtagtgtatatagtattaatt 33055959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 42005018 - 42004920
Alignment:
Q  24 ttgtttgttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattg 121  Q
    ||||||||||| |||||| ||| | |||||||||  ||||||||||  |||||||||||| || | |||||||| ||||| | | ||||||||||||||    
T  42005018 ttgtttgtttttattaaaaaaacaataatactttggaagtagtgtaacataatattaattgaagggtacaattgaaaataaaaaattattattgcattg 42004920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 43480903 - 43480997
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattat-tgcattgaaa 124  Q
    ||||||||||||||||| |||||||||  |||| ||||||| | ||||||||||| | || ||||| ||| | | ||||||||| ||||||||||    
T  43480903 ttttcattaaagaaaaaataatactttggaagttgtgtataaagtattaattaaaaggtataattgaaaagaaaaagttattatatgcattgaaa 43480997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 4288744 - 4288864
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | | |||||| ||| | | | |||||||||||||  ||||||     
T  4288744 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaatggtgcaattgaaaagaaaaaattattattgcattagaaactgt 4288843  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||| ||||| ||||    
T  4288844 aagtgatattcattttgaaac 4288864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 6220437 - 6220557
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||| | ||| ||||| |||  ||||||||||  |||||||||||| || | |||| ||| ||| | | |||||||||||||||| ||||| |    
T  6220437 ttttcattaaaaagaaaataataatttggaagtagtgtaacataatattaattgaaaggtacagttgaaaagaaaaagttattattgcattggaaactaa 6220536  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  6220537 aagtgacattcattttaaaac 6220557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 7872810 - 7872874
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaatt 95  Q
    ||||||||||||||||| ||||||||| |||||||| | |||| |||||||| || || ||||||    
T  7872810 ttttcattaaagaaaaaataatactttgaaagtagtatttatagtattaattgaaggaaacaatt 7872874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 34455096 - 34454996
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||| ||||||||| |||||| | ||||||  ||||||| || |||||||||| ||||| | | ||| ||||| |||||||||||| |||  ||||||||    
T  34455096 aaaaataatactttgaaagtattatatatatgattaattgaaggatacaattgaaaataaaaaattagtattgtattgaaaactgacagttttatttatt 34454997  T
Q  144 t 144  Q
    |    
T  34454996 t 34454996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 7042220 - 7042271
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    |||| ||||||||||||  |||||||| ||||||||||||||| ||||||||    
T  7042220 tttttattaaagaaaaaagaatactttgaaagtagtgtatatagtattaatt 7042271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 1423317 - 1423207
Alignment:
Q  26 gtttgttt-tcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaa 123  Q
    |||||||| |||||||||||||| ||||| |||  ||||||||||  ||| |||||||| || | || ||||| ||| |   |||||||||| |||||||    
T  1423317 gtttgtttctcattaaagaaaaaataatattttggaagtagtgtaacatactattaattgaagggtataattgaaaagaataagttattattccattgaa 1423218  T
Q  124 aactgaaagtg 134  Q
    |||||||||||    
T  1423217 aactgaaagtg 1423207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 17703081 - 17703019
Alignment:
Q  88 atacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||| ||||| | | |||||||||||||||||||| ||||||||  ||| ||||||||||    
T  17703081 atacaatcggaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaac 17703019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 27964433 - 27964507
Alignment:
Q  60 aagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||| |||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||||| ||||||    
T  27964433 aagtagtgtgtatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtg 27964507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 28072611 - 28072567
Alignment:
Q  106 agttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||    
T  28072611 agttattattgtattgaaaactgaaagtgacattcattttaaaac 28072567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 27209108 - 27209005
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||| || | |||||||| ||||| | |||||||||||||||| |||| |||    
T  27209108 ttttcattaaagaaaaaataatactttggaagtagtgtatataatattaattgaatggtacaattgaaaataaaaagttattattgcattggaaaccgaa 27209009  T
Q  131 agtg 134  Q
    ||||    
T  27209008 agtg 27209005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 29568015 - 29567912
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  |||||||||||||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||||||||    
T  29568015 ttttcattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaa 29567916  T
Q  131 agtg 134  Q
    ||||    
T  29567915 agtg 29567912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 49900788 - 49900909
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgca-ttgaaaactg 128  Q
    ||||| |||||||||||  ||||||||| ||||||||||||||| |||||||| || | |||||||| ||||| | ||||||||||| | ||||||||||    
T  49900788 ttttctttaaagaaaaaaataatactttgaaagtagtgtatatattattaattgaaaggtacaattgaaaataaaaagttattattgtatttgaaaactg 49900887  T
Q  129 aaagtggtatttattttaaaac 150  Q
    ||||||  ||||||||||||||    
T  49900888 aaagtgacatttattttaaaac 49900909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 15823154 - 15823034
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  15823154 ttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 15823055  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  15823054 aagtgacattcattttaaaac 15823034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 33622396 - 33622491
Alignment:
Q  31 ttttcattaaagaaaaa-gtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaa 125  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||   |||||||| ||| ||| ||||||||||||||||||||    
T  33622396 ttttcattaaagaaaaatgtaatactttagaagtagtgtacataatattaactaaagagtacaattgaaaagataaagttattattgcattgaaaa 33622491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 46554917 - 46554798
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| |||||||||  |||||||||||||| |||||||| || | |||||||| ||||| | ||||||||||||| || ||||||||    
T  46554917 tttttattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaataaaaagttattattgcagtggaaactgaa 46554818  T
Q  131 agtggtatttattttaaaac 150  Q
     |||  ||| ||||||||||    
T  46554817 ggtgacattcattttaaaac 46554798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 26595101 - 26595220
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||| ||||  || ||||||||||| |||||||| || | |||||||| ||| | | | |||||||||||||| ||||||||    
T  26595101 ttttcattaaagaaaaattaattctttggaaatagtgtatatagtattaattgaatggtacaattgaaaagaaaaatttattattgcattgtaaactgaa 26595200  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||| ||||||||||    
T  26595201 agtgacattcattttaaaac 26595220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 2610864 - 2610981
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||| ||||  |||||||||  |||||||||||| |||||||||| || | |||||||| ||| | | | ||||||||| |||||||||||||    
T  2610864 ttttcattaaaaaaaa--taatactttggaagtagtgtatagaatattaattgaatgttacaattgaaaagaaaaaattattattgtattgaaaactgaa 2610961  T
Q  131 agtggtatttattttaaaac 150  Q
    ||| ||||| |||| |||||    
T  2610962 agtcgtattcatttcaaaac 2610981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 32806969 - 32807073
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||| ||||| || || | |||||||| ||| | | |||||||||||||||| |||||||    
T  32806969 ttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattatttgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 32807068  T
Q  130 aagtg 134  Q
    |||||    
T  32807069 aagtg 32807073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 46286849 - 46286953
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| | ||||||||||| |||||| ||||| |||||||| || | | |||||| ||| | | |||||||||||||||||||| |||    
T  46286849 ttttcattaaagaaaaaatgatactttaaaaatagtgtaatatagtattaattgaagggtgcaattgaaaagaaaaagttattattgcattgaaaaatga 46286948  T
Q  130 aagtg 134  Q
    |||||    
T  46286949 aagtg 46286953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 7191238 - 7191358
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||| |||||||| || | || ||||| ||| | | |||||||||| ||| |||||  ||    
T  7191238 ttttcgttaaagaaaaaaataatattttaaaagtagtgtatatagtattaattgaaaggtataattgaaaagaaaaagttattattacatagaaaatcga 7191337  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||||||||||||||    
T  7191338 aagtgacatttattttaaaac 7191358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 9915563 - 9915443
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||| | | | |||||||||||||| |||||||    
T  9915563 ttttcattaaagaaaaaataatactttgcaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactga 9915464  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||| ||||||||||    
T  9915463 aaatgacattcattttaaaac 9915443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 25560904 - 25561004
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| |||  |||||||||||||| |||||||| || | || ||||| ||| | | | |||||||||||||| ||||||||    
T  25560904 ttttcattaaagaaaaaataatattttggaagtagtgtatatagtattaattgaaaggtataattgaaaagaaaaaattattattgcattggaaactgaa 25561003  T
Q  131 a 131  Q
    |    
T  25561004 a 25561004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 31491801 - 31491905
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| | ||||||| |||||||||| | ||| |||||||| || |||||||||| ||| | | |||||||||  ||||||||| |||    
T  31491801 ttttcattaaagaaaaaattatactttgaaagtagtgtaacatagtattaattgaaggatacaattgaaaagaaaaagttattatgacattgaaaattga 31491900  T
Q  130 aagtg 134  Q
    |||||    
T  31491901 aagtg 31491905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 35847972 - 35848068
Alignment:
Q  39 aaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||| ||||||||| |||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||||||||||||    
T  35847972 aaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattgtaaactgaaagtg 35848068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 46046093 - 46045989
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||| || ||||||||| |||||||||||  ||| |||||||  || | || ||||| ||||| | |||||||||||||| |||||||||    
T  46046093 ttttcattaaagaataaataatactttgaaagtagtgtaacatagtattaatcgaagggtataattgaaaataaaaagttattattgcatcgaaaactga 46045994  T
Q  130 aagtg 134  Q
    |||||    
T  46045993 aagtg 46045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 34110647 - 34110544
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| ||||||| || | |||||| ||||| || | |||||||  ||| | | |||||||||||||||| |||||||    
T  34110647 ttttcattaaagaaaaaataatactttgaaagtagagtaagataataataattgaagggtacaattaaaaagaaaaagttattattgcattggaaactga 34110548  T
Q  130 aagt 133  Q
    ||||    
T  34110547 aagt 34110544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 49468742 - 49468845
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta-tataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||| ||||  |||||||||| |||| |||||||| || | |||||||| ||| | |  ||||||||||||||| |||||||    
T  49468742 ttttcattaaagaaaaaataatcctttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaatgttattattgcattggaaactga 49468841  T
Q  130 aagt 133  Q
    ||||    
T  49468842 aagt 49468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 16757239 - 16757329
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    |||| ||||||||| ||||| ||||||||| |||||||| || | |||||||| ||| |   |||||||||||||||| ||||||||||||    
T  16757239 aaaaataatactttgaaagttgtgtatatagtattaattgaagggtacaattgaaaagaataagttattattgcattggaaactgaaagtg 16757329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 5087 - 5034
Alignment:
Q  42 gaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaatt 95  Q
    |||||| ||||||||| |||||||||||||||||||||||| || |||||||||    
T  5087 gaaaaaataatactttgaaagtagtgtatataatattaattgaatgatacaatt 5034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 18794568 - 18794692
Alignment:
Q  26 gtttgttttc-attaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaa 124  Q
    |||||||||| ||||||||||||  |||| |||  ||||||||||||||||||||||| || | | ||| || ||| | | |||||||||||||||  ||    
T  18794568 gtttgttttccattaaagaaaaaagaatattttggaagtagtgtatataatattaattgaagggtgcaactgaaaagaaaaagttattattgcattcgaa 18794667  T
Q  125 actgaaagtggtatttattttaaaac 150  Q
    ||||||| ||  ||||||||||||||    
T  18794668 actgaaa-tgacatttattttaaaac 18794692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 5463695 - 5463591
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||||||||  ||| |||||||||||   |||||||| ||| | | |||||| ||||||||| |||||||    
T  5463695 ttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattaaagtgtacaattgaaaagaaaaagttataattgcattggaaactga 5463596  T
Q  130 aagtg 134  Q
    |||||    
T  5463595 aagtg 5463591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 10842900 - 10842796
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||| ||||  ||| |||||||| ||   |||||||| ||| | |  |||||||||||||||||||||||    
T  10842900 ttttcattaaagaaaaaataatactttggaagtactgtaacatagtattaattgaagagtacaattgaaaagaaaatgttattattgcattgaaaactga 10842801  T
Q  130 aagtg 134  Q
    |||||    
T  10842800 aagtg 10842796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 48009130 - 48009010
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||| |||||||||| |||||||||  ||| ||||||  ||| |||||||| |||| |||||||| ||| | | ||||||||||||||| |||||| |    
T  48009130 ttttcaataaagaaaaaataatactttggaagcagtgtaacatagtattaattgaacggtacaattgaaaagaaaaagttattattgcattaaaaactaa 48009031  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||| ||||||||||    
T  48009030 aaatgccattcattttaaaac 48009010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 44108721 - 44108599
Alignment:
Q  31 ttttcattaaagaaaaag--taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    |||||||||||||||||   |||||||||  ||||| ||||  ||| |||||||| || | |||||||| ||| | | ||||||||||| |||| |||||    
T  44108721 ttttcattaaagaaaaaaaataatactttggaagtattgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaact 44108622  T
Q  128 gaaagtggtatttattttaaaac 150  Q
    |||||||  ||||||||||||||    
T  44108621 gaaagtgacatttattttaaaac 44108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 25487195 - 25487089
Alignment:
Q  43 aaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttat 142  Q
    ||||| |||||||||  |||||||||  | | ||||||||  | | |||||||| ||| | | |||||||||||||||||||||||||||||  ||| ||    
T  25487195 aaaaattaatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcat 25487096  T
Q  143 tttaaaa 149  Q
    |||||||    
T  25487095 tttaaaa 25487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 50094350 - 50094245
Alignment:
Q  31 ttttcattaaagaaaaagt-aatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||   ||||||||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||||||    
T  50094350 ttttcattaaagaaaaaaacaatactttgtaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactg 50094251  T
Q  129 aaagtg 134  Q
    ||||||    
T  50094250 aaagtg 50094245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 52125167 - 52125268
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||| ||||| ||||||| |  ||||||||||  |||||||||||| || | ||||||||  |||| | | |||||||||||||| |||||||    
T  52125167 ttttcattaaacaaaaaataatactatggaagtagtgtaacataatattaattgaagggtacaattgagaataaaaaattattattgcattggaaactga 52125266  T
Q  130 aa 131  Q
    ||    
T  52125267 aa 52125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 8895047 - 8895111
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaatt 95  Q
    ||||||||||| ||||| ||||| ||| ||| |||||||||||||||||||| || | |||||||    
T  8895047 ttttcattaaaaaaaaaataatattttgaaaatagtgtatataatattaattgaagggtacaatt 8895111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 30292984 - 30292940
Alignment:
Q  106 agttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||    
T  30292984 agttattattgcattggaaactgaaagtggcattcattttaaaac 30292940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 43759452 - 43759348
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||| | |||  ||||||||||  ||| |||||||| || | |||||||| ||| | | | |||||||||||| |||||||||    
T  43759452 ttttcattaaagaaaaaataacattttggaagtagtgtaacatattattaattgaagggtacaattgaaaagaaaaaattattattgcatcgaaaactga 43759353  T
Q  130 aagtg 134  Q
    |||||    
T  43759352 aagtg 43759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 48025285 - 48025389
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||| ||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||  | | |||||||||||||||| |||| ||    
T  48025285 ttttctttaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaacgaaaaagttattattgcattggaaaccga 48025384  T
Q  130 aagtg 134  Q
    |||||    
T  48025385 aagtg 48025389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 1740717 - 1740792
Alignment:
Q  75 tattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||| || | |||||||| ||||| | |||||||||| ||||| ||||||||||||  ||| ||||||||||    
T  1740717 tattaattgaatggtacaattgaaaataaaaagttattatttcattggaaactgaaagtgacattcattttaaaac 1740792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 13408337 - 13408416
Alignment:
Q  71 ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||| || |||| | |||||||| ||| | | ||||||||||||||||||||||||||||   ||| ||||||||||    
T  13408337 ataatatcaactaaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtaaaattcattttaaaac 13408416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 24884490 - 24884416
Alignment:
Q  75 tattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaa 149  Q
    |||||||| || | || ||||| ||||| | |||||||||||||||| ||| ||||||||  |||||||||||||    
T  24884490 tattaattgaagggtataattgaaaataaaaagttattattgcattggaaattgaaagtgacatttattttaaaa 24884416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 50249416 - 50249326
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||||||||  |||||||||  | | ||||||||  | | |||||||| ||| | | |||||||||||||||| ||||||||||||    
T  50249416 aaaagtaatactttggaagtagtgtgcaaagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtg 50249326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 31798710 - 31798605
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||  |||||||||  ||||||||||  ||| ||||||||||| | || ||||| ||| | | ||||||||||| || | ||||||    
T  31798710 ttttcattaaagaaaaaaataatactttggaagtagtgtaacatagtattaattaaaaggtataattgaaaagaaaaagttattattgtatcggaaactg 31798611  T
Q  129 aaagtg 134  Q
    ||||||    
T  31798610 aaagtg 31798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 8989671 - 8989735
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaatt 95  Q
    ||||||||||||||||| ||||| ||| || |||||||||| | |||||||| || |||| ||||    
T  8989671 ttttcattaaagaaaaaataatattttgaatgtagtgtatagagtattaattgaaggatataatt 8989735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 134
Target Start/End: Complemental strand, 15573651 - 15573623
Alignment:
Q  106 agttattattgcattgaaaactgaaagtg 134  Q
    |||||||||||||||||||||||||||||    
T  15573651 agttattattgcattgaaaactgaaagtg 15573623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 31699321 - 31699444
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| |||  ||||| ||| |||| |||||||| || | |||||||| ||| | | | |||||||| ||| |||| | |||    
T  31699321 ttttcattaaagaaaaaataatattttggaagtaatgtttatagtattaattgaagggtacaattgaaaagaaaaaattattattacatagaaatc-gaa 31699419  T
Q  131 agtggtatttattttaaaacgaaga 155  Q
    ||||| | | || ||||||||||||    
T  31699420 agtggcactcatcttaaaacgaaga 31699444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 29519562 - 29519682
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||| ||||||||||  ||| |||||||| || |||||||||| ||||| | |||||||||||||||| ||||| |    
T  29519562 ttttcattaaagaaaaaataatactttagaagtagtgtaacatagtattaattgaaggatacaattgaaaataaaaagttattattgcattggaaactaa 29519661  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||||||||| ||||    
T  29519662 aagtgacatttattttgaaac 29519682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 34413584 - 34413704
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  ||||| |||| ||||||||||||||||||||||| || | |||||||| ||||| | |||||||||||||||  ||| |||    
T  34413584 ttttcattaaagaaaaaaataatattttagaagtagtgtatataatattaattgaatggtacaattgaaaataaaaagttattattgcatttgaaattga 34413683  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||||||||| ||||    
T  34413684 aagtgacatttattttgaaac 34413704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 50203193 - 50203076
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||| || | |||||||| ||| | | ||||||||||||||||   ||||||    
T  50203193 ttttcattaaagaaaaaataatacttttgaagtaatgtatataatattaattgaagggtacaattgaaaagaaaaagttattattgcattg--gactgaa 50203096  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||| ||||||||||    
T  50203095 agtgacattcattttaaaac 50203076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 52957827 - 52957931
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||||  |||||||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  52957827 ttttcattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 52957926  T
Q  130 aagtg 134  Q
    |||||    
T  52957927 aagtg 52957931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 30261378 - 30261275
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||||||| |||||| |||||||| |||||||| || | |||||||| ||| | |   |||||||||||||| ||||||||    
T  30261378 ttttcattaaagaaaaaataatactttgaaagtaatgtatatagtattaattgaagggtacaattgaaaagaaaacattattattgcattggaaactgaa 30261279  T
Q  131 agtg 134  Q
    ||||    
T  30261278 agtg 30261275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 34316342 - 34316223
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta-tataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||| | |||| ||||  |||||||| | ||||||||||||| || | |||||||| ||||| | | |||||||||||||| |||||||    
T  34316342 ttttcattaaagaaagaataatcctttggaagtagtgcaatataatattaattgaagggtacaattgaaaataaaaaattattattgcattggaaactga 34316243  T
Q  130 aagtggtatttattttaaaa 149  Q
    |||||  |||||||||||||    
T  34316242 aagtgacatttattttaaaa 34316223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 47817858 - 47817755
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  |||||||||  |||||||||||||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  47817858 ttttcattaaagaaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgcaaactga 47817759  T
Q  130 aagt 133  Q
    ||||    
T  47817758 aagt 47817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 1819682 - 1819578
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||| |||||||| || | |||||||| ||| | | | |||||||||||||| |||||||    
T  1819682 ttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactga 1819583  T
Q  130 aagtg 134  Q
    |||||    
T  1819582 aagtg 1819578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 29370723 - 29370604
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta-tataatattaatt-aaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    ||||||||||||||||| |||||||||  |||||||||| | || |||||||| ||| |||||||||| ||| | | ||||||||||  |||||||||||    
T  29370723 ttttcattaaagaaaaa-taatactttggaagtagtgtaatttagtattaattgaaaggatacaattgaaaagaaaaagttattattatattgaaaactg 29370625  T
Q  129 aaagtggtatttattttaaaa 149  Q
    ||||||  |||||||||||||    
T  29370624 aaagtgacatttattttaaaa 29370604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 45043625 - 45043745
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||||||||  ||| |||||||| || | |||||||| ||| | | | ||||||||||||||||||||||    
T  45043625 ttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactga 45043724  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  45043725 aagtgacattcattttaaaac 45043745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 45839757 - 45839653
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  |||||||||  ||||| ||||||||||||||||| || | |||||||| ||||| | ||||||||||| |||  |||||||    
T  45839757 ttttcattaaagaaaaaaataatactttggaagtaatgtatataatattaattgaatggtacaattgaaaataaaaagttattattgtattagaaactga 45839658  T
Q  130 aagtg 134  Q
    |||||    
T  45839657 aagtg 45839653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 49080514 - 49080617
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||   ||||||||||  |||||||||||| || | |||||||| ||||| | ||||||||||||||| ||||||||    
T  49080514 ttttcattaaagaaaaaataatacttcggaagtagtgtaacataatattaattgaagggtacaattgaaaataaaaagttattattgcatt-aaaactga 49080612  T
Q  130 aagtg 134  Q
    |||||    
T  49080613 aagtg 49080617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 52848091 - 52848211
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||||  |||||||||||| || | |||||||| ||| | | | |||||||||||||| ||| |||    
T  52848091 ttttcattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaattga 52848190  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  52848191 aagtgacattcattttaaaac 52848211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 6991300 - 6991417
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||||||| ||| |||||||||||||||||| | || | ||| |||| ||| | | | ||||||||| |||||||||||||    
T  6991300 tttttattaaagaaaaaataatactttgaaaatagtgtatataatattaactgaagggtac-attgaaaagaaaaaattattattgtattgaaaactgaa 6991398  T
Q  131 agtggtatttattttaaaa 149  Q
    ||||  ||| |||||||||    
T  6991399 agtgacattcattttaaaa 6991417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 41496294 - 41496205
Alignment:
Q  61 agtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||||||||||| ||   |||||||| ||| | | ||||||||||| |||||||||||||||||  ||||||||| ||||    
T  41496294 agtagtgtatataatattaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgagatttattttgaaac 41496205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 8971162 - 8971058
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  |||||||||  |||||||||||||| |||||||| ||   |||||||| ||| | | | |||||||| |||||||||||||    
T  8971162 ttttcattaaagaaaaaaataatactttggaagtagtgtatatattattaattgaagagtacaattgaaaagaaaaaattattatttcattgaaaactga 8971063  T
Q  130 aagtg 134  Q
    |||||    
T  8971062 aagtg 8971058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 10573192 - 10573288
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    |||||||||| |||||| |||||||||  ||||| |||||||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||    
T  10573192 ttttcattaatgaaaaaataatactttggaagtattgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaact 10573288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 19878768 - 19878664
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| ||| |||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  19878768 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtataaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 19878669  T
Q  130 aagtg 134  Q
    |||||    
T  19878668 aagtg 19878664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 20448159 - 20448055
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||||  ||| |||||||| || | || ||||| ||| | | | ||||||||||||||||||||||    
T  20448159 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaaattattattgcattgaaaactga 20448060  T
Q  130 aagtg 134  Q
    |||||    
T  20448059 aagtg 20448055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 41920346 - 41920466
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  |||||||| |  |||||||||||| || | || ||||| ||| | | |||||||||||| ||| |||||||    
T  41920346 ttttcattaaagaaaaaataatactttggaagtagtggaacataatattaattgaagggtataattgaaaagaaaaagttattattgctttggaaactga 41920445  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||||||||||||||    
T  41920446 aaatgacatttattttaaaac 41920466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 44571902 - 44572022
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||| | | |||| ||||||||||| |||||||    
T  44571902 ttttcattaaagaaaaaataatactttggaagtagtgtaacatattattaattgaagggtacaattgaaaagaaaaagtttttattgcattggaaactga 44572001  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||| |  ||| ||||||||||    
T  44572002 aagcgacattcattttaaaac 44572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 53814534 - 53814638
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||| |||||||| || | |||||||  ||||| | ||||||||||||||||  |||| |    
T  53814534 ttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattaaaaataaaaagttattattgcattgttaactaa 53814633  T
Q  130 aagtg 134  Q
    |||||    
T  53814634 aagtg 53814638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 11364345 - 11364243
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||||||| |||| ||| |||||||||  ||||||| ||||||||||||||| || | |||||||| ||| | | |||||||||| |||| ||||| |||    
T  11364345 ttttcattgaagagaaaataatactttggaagtagtatatataatattaattgaagggtacaattgaaaagaaaaagttattatttcattaaaaaccgaa 11364246  T
Q  131 agt 133  Q
    |||    
T  11364245 agt 11364243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 19451242 - 19451352
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatata-------atattaattaaacgatacaattggaaatatacagttattattgcattgaa 123  Q
    ||||||||||||||||| |||||||||  ||||||||||||||        |||||||| || | |||||||| ||| | | |||||||||||||||| |    
T  19451242 ttttcattaaagaaaaaataatactttggaagtagtgtatatactatatggtattaattgaagggtacaattgaaaagaaaaagttattattgcattgga 19451341  T
Q  124 aactgaaagtg 134  Q
    |||||||||||    
T  19451342 aactgaaagtg 19451352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 37654529 - 37654429
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||||| || | |||||||| ||| | | ||||||||||| |||| |||||||    
T  37654529 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactga 37654430  T
Q  130 a 130  Q
    |    
T  37654429 a 37654429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 38991798 - 38991894
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaac 126  Q
    |||||||| |||||||| ||||||||| |||||||||| | |||||||||||| ||  ||||||||  ||| | | |||||||||||||||| ||||    
T  38991798 ttttcattcaagaaaaaataatactttgaaagtagtgtaacataatattaattgaagaatacaattcaaaagaaaaagttattattgcattggaaac 38991894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 49089583 - 49089480
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| || ||||| || | || ||||||||| | | |||||||||||||||||||||| |    
T  49089583 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtactaattgaagggtataattggaaa-aaaaagttattattgcattgaaaactaa 49089485  T
Q  130 aagtg 134  Q
    |||||    
T  49089484 aagtg 49089480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 56373612 - 56373733
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt---atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||||||||||| |||||||||  |||||||||   |||||||||||||| || | |||||||| ||| | | | ||||||||  |||  |||||    
T  56373612 ttttcattaaagaaaaaataatactttggaagtagtgtaacatataatattaattgaagggtacaattgaaaagaaaaaattattattatattagaaact 56373711  T
Q  128 gaaagtggtatttattttaaaa 149  Q
    ||||||  |||| |||||||||    
T  56373712 gaaagtaatattcattttaaaa 56373733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 56460205 - 56460083
Alignment:
Q  31 ttttcattaaa-gaaaaagtaatactttaaaagtagtgtatataatatta--attaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||||| |||||| ||||| |||  ||||||||||||||||||||  ||| || |||| ||||  ||| | | ||||| ||||||||||||| ||    
T  56460205 ttttcattaaaagaaaaaataatattttggaagtagtgtatataatattataattgaaggatataattaaaaagaaaaagttactattgcattgaaagct 56460106  T
Q  128 gaaagtggtatttattttaaaac 150  Q
    |||||||  ||| ||||||||||    
T  56460105 gaaagtgacattcattttaaaac 56460083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 25231281 - 25231175
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||  |||||||||| | | ||||||||| | | |||||| | ||| | | |||||||||||||||| ||| ||||||||  ||| |||    
T  25231281 aaaagtaatactttggaagtagtgtacaaagtattaattatagggtacaatagaaaagaaaaagttattattgcattggaaattgaaagtgacattcatt 25231182  T
Q  144 ttaaaac 150  Q
    |||||||    
T  25231181 ttaaaac 25231175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 37624662 - 37624556
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||| |||||||||  |||||||||  | | ||||||||  | |||||||||| ||| | | |||||||||||||||| ||||||||||||  |||||||    
T  37624662 aaaaataatacttttgaagtagtgtgcagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttatt 37624563  T
Q  144 ttaaaac 150  Q
    || ||||    
T  37624562 ttgaaac 37624556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 50623204 - 50623106
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    |||||||||||||||||  |||||||||| ||||||||||  || ||||||||| || | || ||||| ||| | | ||||||||||||||||||||||    
T  50623204 ttttcattaaagaaaaaaataatactttagaagtagtgtaacattatattaattgaagggtataattgaaaagaaaaagttattattgcattgaaaact 50623106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 21864434 - 21864523
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagt 133  Q
    ||||||||||||||  |||||||||  | | ||||||||  | |||||||||| ||| | | |||||||||||||||| |||||||||||    
T  21864434 aaaagtaatactttggaagtagtgtgcagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagt 21864523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 21920295 - 21920384
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagt 133  Q
    ||||||||||||||  |||||||||  | | ||||||||  | |||||||||| ||| | | |||||||||||||||| |||||||||||    
T  21920295 aaaagtaatactttggaagtagtgtgcagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagt 21920384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 47458424 - 47458488
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattg 96  Q
    ||||| ||||||||||| |||||||||||||||| |||||||| |||||||| || | ||||||||    
T  47458424 ttttcgttaaagaaaaa-taatactttaaaagtaatgtatatagtattaattgaatggtacaattg 47458488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 19930834 - 19930730
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||| |||| ||||| |||  ||||||||||  |||||||||||| || | |||||||| ||| | | |||||||||||||| | ||| |||    
T  19930834 ttttcattaaaggaaaaataatattttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcatcggaaattga 19930735  T
Q  130 aagtg 134  Q
    |||||    
T  19930734 aagtg 19930730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 25123764 - 25123864
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||| ||||||||||| ||||| |||  |||| ||||||||| |||||||| || | ||||| || ||| | | | ||||||||| |||||||||||||    
T  25123764 ttttctttaaagaaaaaataatattttggaagtcgtgtatatagtattaattgaagggtacaactgaaaagaaaaaattattattgtattgaaaactgaa 25123863  T
Q  131 a 131  Q
    |    
T  25123864 a 25123864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 52915593 - 52915681
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaag 132  Q
    ||||||||||||||  |||||||||  | | ||||||||  | |||||||||| ||| | | |||||||||||||||| ||||||||||    
T  52915593 aaaagtaatactttggaagtagtgtgcagagtattaattggatgatacaattgaaaagaaaaagttattattgcattggaaactgaaag 52915681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 27943612 - 27943687
Alignment:
Q  60 aagtagtgtatataatattaattaaacgatacaattggaaatata-cagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||||||||||||||||| || | || ||||| ||| | |  |||||||||||||||||||| ||||||||    
T  27943612 aagtagtgtatataatattaattgaagggtataattgaaaaaaaagaagttattattgcattgaaaattgaaagtg 27943687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 38510296 - 38510379
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||||||||  ||||||||| || | ||||||||  | | |||||||| ||| | | ||||||||||||||||||||||    
T  38510296 aaaagtaatactttggaagtagtgtgtagagtattaattggatggtacaattgaaaagaaaaagttattattgcattgaaaact 38510379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 22220410 - 22220516
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||||||||| |||  |||||||||  ||| ||||||||  | | |||||||| ||| | | |||||||||||||||||||| ||||| ||  |||||||    
T  22220410 aaaagtaatattttggaagtagtgtgcatagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaaatgacatttatt 22220509  T
Q  144 ttaaaac 150  Q
    || ||||    
T  22220510 ttgaaac 22220516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 42605692 - 42605626
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattg 96  Q
    ||||||||||||||||| ||||||||| |||||| ||| | |||||||||||| || | ||||||||    
T  42605692 ttttcattaaagaaaaaataatactttgaaagtaatgtaacataatattaattgaagggtacaattg 42605626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 24941000 - 24940908
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattg 121  Q
    |||||||||||||||||  ||||| ||| |||||||||||  ||| |||||||| || | |||||||| ||| | | ||||||||||||||||    
T  24941000 ttttcattaaagaaaaaaataatatttttaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattg 24940908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 30780057 - 30780109
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaatt 82  Q
    |||||||||||||||||  ||||||||| |||||||| | |||||||||||||    
T  30780057 ttttcattaaagaaaaaaataatactttgaaagtagtctttataatattaatt 30780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 40345384 - 40345488
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||| |||||||||||   ||||||||  ||||||||||  ||| |||||||| || | |||||||| ||| | | | |||||||||||||| |||||||    
T  40345384 tttttattaaagaaaatacaatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactga 40345483  T
Q  130 aagtg 134  Q
    |||||    
T  40345484 aagtg 40345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 54042220 - 54042340
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||| | |||||||||  ||||||||| | ||  |||||||| || | |||||||| ||| | | | |||||||| ||||| |||| ||    
T  54042220 ttttcattaaagaaataataatactttggaagtagtgtaacatggtattaattgaaaggtacaattgaaaagaaaaaattattattacattggaaaccga 54042319  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  54042320 aagtgacattcattttaaaac 54042340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 6374532 - 6374430
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||||||| || | |||||||| ||| | | |||||||||||||||||||||||||    
T  6374532 ttttcattaaagaaaaaataatactttggaagtaatgtatataatattaattgaa-ggtacaattgaaaagaaaaagttattattgcattgaaaactgaa 6374434  T
Q  131 agtg 134  Q
    ||||    
T  6374433 agtg 6374430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 9812292 - 9812173
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |  |||||| ||||||||||||||||||||| || || | |||||||| ||||| | |||||||||||||||  ||||||||    
T  9812292 ttttcattaaagaaaaaattgtactttgaaagtagtgtatataatattacttgaaaggtacaattgaaaataaaaagttattattgcattagaaactgaa 9812193  T
Q  131 agtggtatttattttaaaac 150  Q
    ||||  ||| ||||||||||    
T  9812192 agtgacattcattttaaaac 9812173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 39463378 - 39463275
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  |||||||||||||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||||||||    
T  39463378 ttttcattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaa 39463279  T
Q  131 agtg 134  Q
    ||||    
T  39463278 agtg 39463275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 4989598 - 4989478
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||||  |||||||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  4989598 ttttcattaaagaaaaaataatactttgtaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 4989499  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||| ||||| ||||    
T  4989498 aagtgatattcattttgaaac 4989478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 45358928 - 45359028
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||  ||||||||| ||| | | | |||||||||||||||||| ||||    
T  45358928 ttttcattaaagaaaaaataatactttggaagtagtgtatataatattaattgaaaaatacaattgaaaagaaaaaattattattgcattgaaaattgaa 45359027  T
Q  131 a 131  Q
    |    
T  45359028 a 45359028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 31693655 - 31693774
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||| ||| |||||||||  || |||||||  |||||||||||| || | |||||||| ||| | | ||||||||||||||||||||||||    
T  31693655 ttttcattaaagataaaataatactttggaa-tagtgtaacataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactga 31693753  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||| ||||||||||    
T  31693754 aagtgatattcattttaaaac 31693774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 17921077 - 17920956
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    |||||||||||||||||  |||||||||  ||||||||||  |||||||||||| ||   |||||||| ||| | | |||||||||||||||||||||||    
T  17921077 ttttcattaaagaaaaaaataatactttggaagtagtgtaacataatattaattgaagagtacaattgtaaagaaaaagttattattgcattgaaaactg 17920978  T
Q  129 aaagtggtatttattttaaaac 150  Q
    ||||||  ||| ||||||||||    
T  17920977 aaagtgacattcattttaaaac 17920956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 40228694 - 40228590
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||| ||||  |||||||||||| ||   |||||||| ||| | | ||||||||||||||||||||||||    
T  40228694 ttttcattaaagaaaaaataatactttggaagtaatgtaacataatattaattgaaatgtacaattgaaaagaaaaagttattattgcattgaaaactga 40228595  T
Q  130 aagtg 134  Q
    |||||    
T  40228594 aagtg 40228590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 43448836 - 43448716
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtata-taatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||| ||||   || |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  43448836 ttttcattaaagaaaaaataatactttgaaagtaatgtaacgtagtattaattgaagggtacaattgaaaaaaaaaagttattattgcattggaaactga 43448737  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||| ||||| ||||    
T  43448736 aagtgatattcattttgaaac 43448716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 44713654 - 44713534
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| ||| |||||||||||  | |||||||||| || | || ||||| ||| | | |||||||||||||||| ||| |||    
T  44713654 ttttcattaaagaaaaaataatattttgaaagtagtgtaacacaatattaattgaagggtataattgaaaaaaaaaagttattattgcattggaaaatga 44713555  T
Q  130 aagtggtatttattttaaaac 150  Q
    ||||| |||| ||||||||||    
T  44713554 aagtgatattcattttaaaac 44713534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 40399911 - 40399962
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  40399911 ttttcattaaagaaaaaataatactttgaaagtagtgtatataatattaatt 40399962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 43084661 - 43084779
Alignment:
Q  32 tttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||||||||||||||| ||||  |||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||||||||||||    
T  43084661 tttcattaaagaaaaaataattttttggaagtagtgtaacatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaa 43084760  T
Q  131 agtggtatttattttaaaa 149  Q
    ||||  ||| |||||||||    
T  43084761 agtgacattcattttaaaa 43084779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 31233973 - 31234076
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt-aaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||| |||| ||||| |||| |||||  |||||||||||||||| ||| |||||||||| ||| | | ||||||||||||||| |||||| |    
T  31233973 ttttcattaaaggaaaaataataatttagaagtaccgtatataatattaattgaaaggatacaattgaaaaaaga-agttattattgcattaaaaactaa 31234071  T
Q  130 aagtg 134  Q
    |||||    
T  31234072 aagtg 31234076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 13367982 - 13368033
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  13367982 ttttcattaaagaaaaaataatactttggaagtagtgtatataatattaatt 13368033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 4760592 - 4760711
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||| |||||||| || | |||||||| ||| | | | ||||| |||||||| ||| |||    
T  4760592 ttttcattaaagaaaaa-taatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattgttgcattggaaaatga 4760690  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  4760691 aagtgacattcattttaaaac 4760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 31899281 - 31899385
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||  |||||||||  ||||||||||  |||||||||||| ||   |||||||| ||| | | | |||||||||||||| |||||||    
T  31899281 ttttcattaaagaaaagataatactttggaagtagtgtaacataatattaattgaagagtacaattgaaaagaaaaaattattattgcattggaaactga 31899380  T
Q  130 aagtg 134  Q
    |||||    
T  31899381 aagtg 31899385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 39698699 - 39698803
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||| ||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  39698699 ttttcattaaagaaaaaataatattttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 39698798  T
Q  130 aagtg 134  Q
    |||||    
T  39698799 aagtg 39698803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 514996 - 514875
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatatta---attaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||| ||||||  ||||||||   |||||||||||||| |||||   ||| || |||||||||| ||| | | | |||||||||||||||||| |    
T  514996 ttttcattatagaaaatataatacttcggaagtagtgtatatagtattattaattgaaggatacaattgaaaagaaaaaattattattgcattgaaaatt 514897  T
Q  128 gaaagtggtatttattttaaaa 149  Q
    |||||||  ||| |||||||||    
T  514896 gaaagtgacattcattttaaaa 514875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 34156654 - 34156535
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaa-tatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  |||||||||| ||| |||||||| || | |||||||| |||  | | | |||||||||||||| |||| |     
T  34156654 ttttcattaaagaaaaaataatattttggaagtagtgtacatagtattaattgaagggtacaattgaaaagaaaaaaattattattgcattggaaaccgt 34156555  T
Q  130 aagtggtatttattttaaaa 149  Q
    ||||| |||| |||||||||    
T  34156554 aagtgatattcattttaaaa 34156535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 42179214 - 42179163
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  42179214 ttttcattaaagaaaaaataatacttttaaaatagtgtatatagtattaatt 42179163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 6116068 - 6116158
Alignment:
Q  60 aagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||| ||||||   || | || ||||| ||| | | ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  6116068 aagtagtgtatatagtattaaacgaagggtataattgaaaagaaaaagttattattgcattgaaaaccgaaagtgatattcattttaaaac 6116158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 29312224 - 29312344
Alignment:
Q  31 ttttcattaaagaaaaagtaatact---ttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    ||||||||||||||||| |||||||   |   |||||||||||||| |||||||| ||   |||||||| ||| | || ||||||||||||||| |||||    
T  29312224 ttttcattaaagaaaaaataatactacttctgaagtagtgtatatagtattaattgaagagtacaattgaaaacaaacggttattattgcattggaaact 29312323  T
Q  128 gaaagtggtatttattttaaa 148  Q
    |||| ||  ||| ||||||||    
T  29312324 gaaaatgacattcattttaaa 29312344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 7839578 - 7839474
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||||||| | |||||||||||| || | || ||||| ||| | |  ||||||||||||||| ||| |||    
T  7839578 ttttcattaaagaaaaaataatattttggaagtagtgtaacataatattaattgaaaggtaaaattgaaaagaaaaggttattattgcattggaaattga 7839479  T
Q  130 aagtg 134  Q
    |||||    
T  7839478 aagtg 7839474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 15227689 - 15227583
Alignment:
Q  31 ttttcattaaagaaaaag---taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaact 127  Q
    |||||||||||||||||    ||||||||| ||||| ||||||||| |||||||| ||   ||| |||| ||| | ||| |||||||||||||||||  |    
T  15227689 ttttcattaaagaaaaaaaaataatactttgaaagttgtgtatatagtattaattgaagtgtaccattgaaaagaaacatttattattgcattgaaattt 15227590  T
Q  128 gaaagtg 134  Q
    |||||||    
T  15227589 gaaagtg 15227583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 40362479 - 40362435
Alignment:
Q  106 agttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||    
T  40362479 agttattattgcattgaaaactgaaagtgacattcattttaaaac 40362435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 5295452 - 5295543
Alignment:
Q  43 aaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||| ||||| |||  ||||||||||||||||||||||| || | |||||||| ||| | | | |||||||||||||  ||||| ||||||    
T  5295452 aaaaaataatattttggaagtagtgtatataatattaattgaagggtacaattgaaaagaaaaaattattattgcattagaaacttaaagtg 5295543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 19438357 - 19438242
Alignment:
Q  31 ttttcattaaagaaaaagt-aatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactg 128  Q
    ||||||||||||||||| | |||| |||  ||||||||| ||||| |||||||| || | |||||||| ||| | | |||||||||| ||||| ||||||    
T  19438357 ttttcattaaagaaaaaataaatattttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattacattggaaactg 19438258  T
Q  129 aaagtggtatttattt 144  Q
    | ||||  ||||||||    
T  19438257 agagtgacatttattt 19438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 19574507 - 19574416
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattg 121  Q
    ||||||||||||||||| ||||| |||  ||||||||| ||||| |||||||| || | |||||||| ||| | | |||||||||| |||||    
T  19574507 ttttcattaaagaaaaaataatattttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattacattg 19574416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 41679431 - 41679392
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat 70  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  41679431 ttttcattaaagaaaaaataatattttaaaagtagtgtat 41679392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 37559580 - 37559686
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    |||||||||||||| ||| ||||||  | | ||||||||  | | |||||||| ||| | | ||||||||||| |||| ||||||||||||  ||| |||    
T  37559580 aaaagtaatactttgaaaatagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattgatt 37559679  T
Q  144 ttaaaac 150  Q
    |||||||    
T  37559680 ttaaaac 37559686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 39765968 - 39765996
Alignment:
Q  106 agttattattgcattgaaaactgaaagtg 134  Q
    |||||||||||||||||||||||||||||    
T  39765968 agttattattgcattgaaaactgaaagtg 39765996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 19105035 - 19105152
Alignment:
Q  33 ttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaag 132  Q
    ||||||||||||||| ||||  |||||||||| |||||||| |||||||| || | |||||||| ||| | | ||||||||||||||| |||||||||||    
T  19105035 ttcattaaagaaaaaataatgttttaaaagtaatgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattaaaaactgaaag 19105134  T
Q  133 tggtatttattttaaaac 150  Q
    ||  ||| ||||||||||    
T  19105135 tgacattcattttaaaac 19105152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 27935887 - 27935767
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtata-taatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||| ||   || ||||||||||| |||||||||| | ||| | ||||||||||||||||||||||||    
T  27935887 ttttcattaaagaaaaaataatactttggaagtagtttaacgtagtattaattaaatgatacaattgaagataaaaagttattattgcattgaaaactga 27935788  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  27935787 aagtgacattcattttaaaac 27935767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 8293100 - 8293191
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattga 122  Q
    ||||||||| ||||||| ||||| |||  |||||||||||||||||||||||||| |||||||||| ||||| | |||||||||||| ||||    
T  8293100 ttttcattacagaaaaaataataatttggaagtagtgtatataatattaattaaaagatacaattgaaaataaaaagttattattgctttga 8293191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 31418544 - 31418664
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||| |||||||||||| |||||||||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  31418544 ttttaattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 31418643  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||| ||||||||| ||||    
T  31418644 aagtggaatttattttgaaac 31418664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 33939765 - 33939885
Alignment:
Q  31 ttttcattaaagaaaa-agtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||| |||||||||||  || |||||||||||||||||||| || | |||||||||||| | | |||||||||| ||||| ||||  |    
T  33939765 ttttcattaaagaaaaaagtaatactttggaattagtgtatataatattaattgaatggtacaattggaaagaaaaagttattattacattggaaaccaa 33939864  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  33939865 aagtgacattcattttaaaac 33939885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 40339578 - 40339475
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtata-taatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  ||||||||  |||||||||||| ||||||||||| || | |||||||| ||| ||| |||||||||||||||||||| |||    
T  40339578 ttttcattaaagaaaaaagaatactttggaagtagtgtataataatattaattgaagggtacaattgaaaa-ataaagttattattgcattgaaaattga 40339480  T
Q  130 aagtg 134  Q
    |||||    
T  40339479 aagtg 40339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 40753461 - 40753560
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| |||||||| || | |||||||| ||| | | | |||||||| ||||||||||||||    
T  40753461 ttttcattaaagaaaaa-taatactttgaaagtagtgtatatagtattaattgaatggtacaattgaaaagaaaaaattattattacattgaaaactgaa 40753559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 28289334 - 28289220
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| |||||||| || | |||||||| ||| | |  ||||||||||||||||||||| |    
T  28289334 ttttcattaaagaaaaaaataatactttgaaagtagtgtatatagtattaattgaa-ggtacaattgaaaagaaaatgttattattgcattgaaaactca 28289236  T
Q  130 aagtggtatttatttt 145  Q
    |||||  |||||||||    
T  28289235 aagtgacatttatttt 28289220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 29636258 - 29636373
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatata-cagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||| || |||  ||||| ||| | |  |||||||||||||||  |||||||    
T  29636258 ttttcattaaagaaaaaataatactttagaagtagtgtatatagtattaattgaaggatgtaattgaaaaaaaagaagttattattgcattagaaactga 29636357  T
Q  130 aagtggtatttatttt 145  Q
    |||||  |||||||||    
T  29636358 aagtgacatttatttt 29636373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 21752143 - 21752257
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||| ||| ||||||||| ||| ||||||||||||| |||||| || | |||||||| ||  | | |||||||||||||||| ||||||||    
T  21752143 ttttcattaaagataaaataatactttgaaaatagtgtatataatgttaattgaatggtacaattgaaacgaaaaagttattattgcattggaaactgaa 21752242  T
Q  131 agtggtatttatttt 145  Q
    | ||  |||||||||    
T  21752243 aatgacatttatttt 21752257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 27947532 - 27947649
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| | || ||||  ||||||||||  |||||||||||| || | |||||||| ||| | | ||||||||||||||||||||||||    
T  27947532 ttttcattaaagaaaaaatcatcctttggaagtagtgtagcataatattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactga 27947631  T
Q  130 aagtggtatttattttaa 147  Q
    |||||  ||| |||||||    
T  27947632 aagtgacattcattttaa 27947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 1742111 - 1742007
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||||||| |||||||||| | ||| |||||||| || | |||||||| ||| | |  ||||||||||||||| |||||||    
T  1742111 ttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaggttattattgcattggaaactga 1742012  T
Q  130 aagtg 134  Q
    |||||    
T  1742011 aagtg 1742007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 13405158 - 13405278
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  |||||||| |||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||| ||||| |||||||    
T  13405158 ttttcattaaagaaaaaacaatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattggaaactga 13405257  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  13405258 aagtgacattcattttaaaac 13405278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 35777939 - 35777819
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| ||||| || ||||| || | |||||||| ||||| | |||||||||||||||  |||| ||    
T  35777939 ttttcattaaagaaaaaataatactttggaagtagtgtaatatagtactaattgaagggtacaattgaaaataaaaagttattattgcattagaaaccga 35777840  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||||||||| ||||    
T  35777839 aagtgacatttattttgaaac 35777819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 30312570 - 30312459
Alignment:
Q  38 taaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggta 137  Q
    |||||||||| |||||||||  |||||||||||| |||||||||| || | |||||||| ||| | | | ||||||||| ||||||||| |||||||  |    
T  30312570 taaagaaaaaataatactttggaagtagtgtatacaatattaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaaccgaaagtgaca 30312471  T
Q  138 tttattttaaaa 149  Q
    || |||||||||    
T  30312470 ttcattttaaaa 30312459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7759385 - 7759328
Alignment:
Q  26 gtttgttttc-attaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7759385 gtttgttttctattaaagaaaaaataatactttgaaagtagtgtatataatattaatt 7759328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 10476237 - 10476137
Alignment:
Q  49 taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaa 148  Q
    |||||||||  |||||||||||||| |||||||| || | |||||||| ||| | | |||||||||||||||| ||| ||||||||  ||| ||||||||    
T  10476237 taatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcattttaaa 10476138  T
Q  149 a 149  Q
    |    
T  10476137 a 10476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 21819402 - 21819303
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| |||  ||||| |||||||| |||||||| || |||||||||| ||| | | | ||||||||| |||||||||||||    
T  21819402 ttttcattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaatgatacaattgaaaaaaga-atttattattgtattgaaaactgaa 21819304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 32501856 - 32501900
Alignment:
Q  106 agttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  32501856 agttattattgcattgaaaactgaaagtgatatttattttaaaac 32501900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 42879965 - 42880069
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||| ||||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||| |||||||||||||    
T  42879965 ttttcattaaagaaaaaataattctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattgaaaactga 42880064  T
Q  130 aagtg 134  Q
    |||||    
T  42880065 aagtg 42880069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 24133162 - 24133265
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||||||| ||||| |||  | ||||| |||||| |||||||| || | |||||||| ||| | | | |||||||||||||| ||||||||    
T  24133162 ttttcattaaagaaaaaataatattttggatgtagtatatatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaa 24133261  T
Q  131 agtg 134  Q
    ||||    
T  24133262 agtg 24133265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 29530966 - 29531067
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||| ||| |||||||| ||||||||| ||||| |||||  |||||||||||| || | |||||||| ||| | | | ||||||||||||||||||||||    
T  29530966 tttttattgaagaaaaaataatactttgaaagtggtgtaacataatattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactga 29531065  T
Q  130 aa 131  Q
    ||    
T  29531066 aa 29531067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 37490907 - 37490800
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgta---tataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaac 126  Q
    |||||||||||||||||  |||||||||  ||||||||||   |||| |||||||| || | |||||||| ||| | | | |||||||||||||||||||    
T  37490907 ttttcattaaagaaaaaaataatactttccaagtagtgtactatatagtattaattgaaaggtacaattgaaaagaaaaaattattattgcattgaaaac 37490808  T
Q  127 tgaaagtg 134  Q
    ||||||||    
T  37490807 tgaaagtg 37490800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 44453253 - 44453151
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||| ||||  |||||||||| ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  44453253 ttttcattaaaaaaaa--taatactttagaagtagtgtaacatagtattaattgaagggtacaattgaaaaaagaaagttattattgcattggaaactga 44453156  T
Q  130 aagtg 134  Q
    |||||    
T  44453155 aagtg 44453151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 22298116 - 22298012
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||||||| | ||| |||||| | || | |||| ||| ||| | | |||||||||||||||| |||||||    
T  22298116 ttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaactgaagggtacagttgaaaagaaaaagttattattgcattggaaactga 22298017  T
Q  130 aagtg 134  Q
    |||||    
T  22298016 aagtg 22298012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 24680248 - 24680128
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||  ||||| || |  |||  |||||||||| | |||||||| ||| | | |||||||||||||||| |||||||    
T  24680248 ttttcattaaagaaaaaataatactttggaagtaatgcaacatagcattaattaaagggtacaattgaaaagaaaaagttattattgcattggaaactga 24680149  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||| ||||||||||    
T  24680148 aaatgacattcattttaaaac 24680128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 45948661 - 45948765
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||| ||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  45948661 ttttcattaaagaaaaaataatattttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 45948760  T
Q  130 aagtg 134  Q
    |||||    
T  45948761 aagtg 45948765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 48684843 - 48684739
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||| |||||||||||| ||||||||| ||||| |||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||| ||    
T  48684843 tttttattaaagaaaaaataatactttgaaagtggtgtaacatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaaccga 48684744  T
Q  130 aagtg 134  Q
    |||||    
T  48684743 aagtg 48684739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 48843672 - 48843552
Alignment:
Q  31 ttttcattaaagaaaaag-taatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||||||  |||||| ||  |||||||||||||| |||||| | || | || ||||| | | | | | ||||||||||||||||||||||    
T  48843672 ttttcattaaagaaaaaaataatacgttggaagtagtgtatatagtattaaattaagggtataattgaagagaaaaaattattattgcattgaaaactga 48843573  T
Q  130 aagtggtatttattttaaaac 150  Q
    |||||  ||| ||||||||||    
T  48843572 aagtgacattcattttaaaac 48843552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 1031274 - 1031175
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| |||||||||||| ||||| |||  |||||||||||||| |||||||| ||   |||||||| ||||| |  |||||||||||| || ||||||||    
T  1031274 tttttattaaagaaaaaataataatttggaagtagtgtatatagtattaattgaagagtacaattgaaaataaaatgttattattgcaatggaaactgaa 1031175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 8604086 - 8603991
Alignment:
Q  39 aaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||| |||||||||  |||||||||||||| |||||||| || | ||  |||| ||| | | |||||||||||||||| ||| ||||||||    
T  8604086 aaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggtatcattgaaaagaaaaagttattattgcattggaaattgaaagtg 8603991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 44567086 - 44567192
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||  |||||||||  | | ||||||||  | |||||||||| ||| | | | |||||||||||||||||| ||||||||  ||| |||    
T  44567086 aaaagtaatactttggaagtagtgtgcaaagtattaattggatgatacaattgaaaagaaaaatttattattgcattgaaaattgaaagtgacattcatt 44567185  T
Q  144 ttaaaac 150  Q
    |||||||    
T  44567186 ttaaaac 44567192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 10599274 - 10599213
Alignment:
Q  89 tacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||| ||| | | ||||||||||||||||||||||||||||| |||| ||||| ||||    
T  10599274 tacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaac 10599213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 25440978 - 25440873
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||  |||||||||  | | ||||||||  | | |||||||| ||| | | |||||||||||||||| ||||||||||||  || ||||    
T  25440978 aaaagtaatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatatatt 25440879  T
Q  144 ttaaaa 149  Q
    ||||||    
T  25440878 ttaaaa 25440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 31196683 - 31196638
Alignment:
Q  37 ttaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  31196683 ttaaagaaaaaataatactttgaaattagtgtatataatattaatt 31196638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 36808054 - 36807935
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||| ||||| |||||||||||  || ||||||||| ||   |||||||| ||| | | ||||||||||| ||||||||  ||    
T  36808054 ttttcattaaagaaaaaataa-actttgaaagtagtgtaacatgatattaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaagcga 36807956  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||||||||||||||    
T  36807955 aaatgacatttattttaaaac 36807935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 42753824 - 42753775
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaatt 82  Q
    ||||||||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  42753824 ttttcattaaaaaaaa--taatactttaaaaatagtgtatataatattaatt 42753775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 37815844 - 37815806
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgta 69  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  37815844 ttttcattaaagaaaaaataatactttgaaagtagtgta 37815806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 31929905 - 31930010
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtggtatttatt 143  Q
    ||||||||||||||  |||||||||  | | ||||||||  | | |||||||| ||| | | | |||||||||||||||||||||||| |  |||| |||    
T  31929905 aaaagtaatactttggaagtagtgtgcaaagtattaattggagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaaataatattcatt 31930004  T
Q  144 ttaaaa 149  Q
    ||||||    
T  31930005 ttaaaa 31930010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 39557364 - 39557323
Alignment:
Q  108 ttattattgcattgaaaactgaaagtggtatttattttaaaa 149  Q
    |||||||| ||||||||||||||||||  |||||||||||||    
T  39557364 ttattattacattgaaaactgaaagtgacatttattttaaaa 39557323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 45933695 - 45933735
Alignment:
Q  110 attattgcattgaaaactgaaagtggtatttattttaaaac 150  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  45933695 attattgcattgaaaactgaaagtgacattcattttaaaac 45933735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 18288 - 18388
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    ||||||||||||| ||| ||||||||| ||| ||||||||||||| |||||| || | |||||||| ||| | | |||||||||||||||| ||||||||    
T  18288 ttttcattaaagataaaataatactttgaaaatagtgtatataatgttaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaa 18387  T
Q  131 a 131  Q
    |    
T  18388 a 18388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 3537 - 3641
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| |||||||||| ||||||||| | ||| |||||||| || | |||||||| ||| | | ||||||||||| |||| |||||||    
T  3537 ttttcattaaagaaaaaataatactttagaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactga 3636  T
Q  130 aagtg 134  Q
    |||||    
T  3637 aagtg 3641  T

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Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 4260 - 4160
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||| ||||||| ||||  ||||||||| ||||||||||||||||||||||| || | |||||||| ||| | | | |||||||||||||||||| ||||    
T  4260 tttttattaaaggaaaaacaatactttagaagtagtgtatataatattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaattgaa 4161  T
Q  131 a 131  Q
    |    
T  4160 a 4160  T

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Target: scaffold0502 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 605 - 723
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||||||||||  |||| |||||||||  ||||||||||||||||||||||| || | |||||||  ||| | | |||||||||||||||| ||| || |    
T  605 ttttcattaaaacaaaaataatactttggaagtagtgtatataatattaattgaagggtacaattaaaaagaaaaagttattattgcattggaaattgta 704  T
Q  131 agtggtatttattttaaaa 149  Q
    ||||  ||| |||||||||    
T  705 agtgacattcattttaaaa 723  T

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Target: scaffold0565 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 9675 - 9794
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||| ||||| |||  ||||||||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  9675 ttttcattaaagaaaaaataata-tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 9773  T
Q  130 aagtggtatttattttaaaac 150  Q
    || ||  ||| ||||||||||    
T  9774 aaatgacattcattttaaaac 9794  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 24773 - 24877
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtat-ataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    ||||||||||||||||  |||||||||  ||||| ||||  ||| |||||||| || | |||||||| ||| | | |||||||||||||||| |||||||    
T  24773 ttttcattaaagaaaagataatactttggaagtattgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactga 24872  T
Q  130 aagtg 134  Q
    |||||    
T  24873 aagtg 24877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 720 - 823
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaa 130  Q
    |||||||||||||||||  ||  ||||  || ||||||||||||||||||||||| | |||||||| ||| | | | |||||||| || || ||||||||    
T  720 ttttcattaaagaaaaaacaagtctttggaattagtgtatataatattaattaaagggtacaattgaaaagaaaaaattattattccagtggaaactgaa 819  T
Q  131 agtg 134  Q
    ||||    
T  820 agtg 823  T

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Target: scaffold0332 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 3857 - 3947
Alignment:
Q  44 aaaagtaatactttaaaagtagtgtatataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactgaaagtg 134  Q
    ||||||||||||||  |||||||||  | | ||||||||  | | |||||||| ||| | | |||||||||||||||||||||||||||||    
T  3857 aaaagtaatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtg 3947  T

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Target: scaffold0048 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 62753 - 62649
Alignment:
Q  31 ttttcattaaagaaaaagtaatactttaaaagtagtgt-atataatattaattaaacgatacaattggaaatatacagttattattgcattgaaaactga 129  Q
    |||||||||||||| ||||||||| ||  ||||||||| | |||||||||||| || | |||||||  ||| | | |||||||||| ||| | |||||||    
T  62753 ttttcattaaagaagaagtaataccttggaagtagtgtaacataatattaattgaagggtacaattaaaaagaaaaagttattattacataggaaactga 62654  T
Q  130 aagtg 134  Q
    |||||    
T  62653 aagtg 62649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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