View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14146_low_24 (Length: 256)
Name: NF14146_low_24
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14146_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 40696461 - 40696698
Alignment:
| Q |
16 |
cactatctctgcccactctttatgcaatgcacttgctacaaaaacatcgcgaaccgctttaacatttgaagtgttcttggaataagcatcaagttcatac |
115 |
Q |
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| T |
40696461 |
cactatctctgcccactctttatgcaatgcacttgctacaaaaacatcgcgaaccgctttaacatttgaagtgttcttggaataagcatcaagttcatac |
40696560 |
T |
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| Q |
116 |
acaccagatccattggaaaagtgatcagctaacttcagtggtgtttttggtgtcgagtatgacacattgttgacagtgtggaaagatacttgatcaatcg |
215 |
Q |
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| T |
40696561 |
acaccagatccattggaaaagtgatcagctaacttcagtggtgtttttggtgtcgagtatgacacattgttgacagtgtggaaagatacttgatcaatcg |
40696660 |
T |
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| Q |
216 |
tcgcagttgatgcttctagaataaaagtctgagatatt |
253 |
Q |
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| T |
40696661 |
tcgcagttgatgcttctagaataaaagtctgagatatt |
40696698 |
T |
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