View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14146_low_29 (Length: 245)
Name: NF14146_low_29
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14146_low_29 |
 | |
|
| [»] chr4 (35 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 35)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 10244019 - 10243783
Alignment:
| Q |
10 |
aagaatatataatccttgctttggaaactttat-tatctcttatttaacttatttacttaaaaacatccgagagtcctatgggtggtgaggaggtccgta |
108 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10244019 |
aagaatatataatccttgctttggaaacattatatatctcttatttaacttatttacttaaaagcatccgagagtcctatgggtggtgaggaggtccgta |
10243920 |
T |
|
| Q |
109 |
aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggc |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10243919 |
aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggc |
10243820 |
T |
|
| Q |
209 |
ttctcaactggaggcttgtaaacgggtggcttgtaga |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10243819 |
ttctcaactggaggcttgtaaacgggtggcttgtaga |
10243783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 10217888 - 10217742
Alignment:
| Q |
85 |
ctatgggtggtgaggaggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaa |
184 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
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|
| T |
10217888 |
ctatgggtggtgaggtggtccgtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtag |
10217789 |
T |
|
| Q |
185 |
acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaac |
231 |
Q |
| |
|
|| || |||||||| || || |||||||| ||||| ||||||||||| |
|
|
| T |
10217788 |
accggaggcttgtacacaggtggcttctctactggtggcttgtaaac |
10217742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 243
Target Start/End: Complemental strand, 10243697 - 10243560
Alignment:
| Q |
106 |
gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga |
205 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| |||||||||||||| || || |
|
|
| T |
10243697 |
gtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggtggcttgtaaactggg |
10243598 |
T |
|
| Q |
206 |
ggcttctcaactggaggcttgtaaacgggtggcttgta |
243 |
Q |
| |
|
|||||||| ||||| || |||||||| ||||||||||| |
|
|
| T |
10243597 |
ggcttctctactggtggtttgtaaactggtggcttgta |
10243560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 10243873 - 10243773
Alignment:
| Q |
110 |
actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggct |
209 |
Q |
| |
|
||||| || ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| ||||||| |
|
|
| T |
10243873 |
actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgtagactggaggct |
10243774 |
T |
|
| Q |
210 |
t |
210 |
Q |
| |
|
| |
|
|
| T |
10243773 |
t |
10243773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 10254256 - 10254169
Alignment:
| Q |
143 |
ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaa |
230 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||| ||||| ||||| |||||||||| |
|
|
| T |
10254256 |
ggtggcttgtacactggaggtttctcaactgggggcttgtaaacaggaggttggtaaacaggaggtttctctactggtggcttgtaaa |
10254169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 10243577 - 10243458
Alignment:
| Q |
106 |
gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga |
205 |
Q |
| |
|
||||||||||||||| | || || ||||||||||| || || ||||||||||| |||||| | |||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
10243577 |
gtaaactggtggcttgtacaccggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtacacaggtggcttgtacaccggt |
10243478 |
T |
|
| Q |
206 |
ggcttctcaactggaggctt |
225 |
Q |
| |
|
|| || | |||||||||||| |
|
|
| T |
10243477 |
ggtttgtaaactggaggctt |
10243458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 10243705 - 10243605
Alignment:
| Q |
143 |
ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt |
242 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||||||||||||| || |||||||| || || ||| | ||||| || ||||| || |||||||||| |
|
|
| T |
10243705 |
ggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgtagactgggggtttcactactgggggtttgtatacaggtggcttgt |
10243606 |
T |
|
| Q |
243 |
a |
243 |
Q |
| |
|
| |
|
|
| T |
10243605 |
a |
10243605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 10264924 - 10264797
Alignment:
| Q |
113 |
ggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttct |
212 |
Q |
| |
|
||||||||||| ||| |||| |||| ||| || ||||| | ||||||||||| | |||||||||||| | ||| ||||||||||| |||||||| |||| |
|
|
| T |
10264924 |
ggtggcttctccacttgaggtttgtgaactggaggcttctctactggaggtttgtgaactgggggcttctcaactggtggcttgtacaccggaggtttct |
10264825 |
T |
|
| Q |
213 |
caactggaggcttgtaaacgggtggctt |
240 |
Q |
| |
|
| || || ||||||||||| ||| |||| |
|
|
| T |
10264824 |
ctacaggtggcttgtaaacaggtagctt |
10264797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 10254575 - 10254477
Alignment:
| Q |
139 |
aaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg |
237 |
Q |
| |
|
||||||||||||||| ||||| |||||||| || || ||||| | ||| ||||||||||| | ||||||||||||||||| |||||||| || ||||| |
|
|
| T |
10254575 |
aaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtgg |
10254477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 10264732 - 10264647
Alignment:
| Q |
155 |
actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggctt |
240 |
Q |
| |
|
||||||||||| | |||||||||||| | ||||||||||||||| |||||||| ||||| || || ||||||||||| ||| |||| |
|
|
| T |
10264732 |
actggaggtttgtaaactgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagctt |
10264647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 10217822 - 10217703
Alignment:
| Q |
106 |
gtaaactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccgga |
205 |
Q |
| |
|
||||||||| || ||||| ||||| || ||||| ||||| |||||||| || || || ||||| ||||| ||||||||||| || || ||||| ||||| |
|
|
| T |
10217822 |
gtaaactggaggtttctcaactgggggtttgtagaccggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggt |
10217723 |
T |
|
| Q |
206 |
ggcttctcaactggaggctt |
225 |
Q |
| |
|
||||| | |||||||||||| |
|
|
| T |
10217722 |
ggcttgtaaactggaggctt |
10217703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 10217713 - 10217595
Alignment:
| Q |
125 |
actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct |
224 |
Q |
| |
|
||||||||||| | || || || |||||||| || |||||||| |||||||||||||| ||||||||||| | || || ||||| | ||||||||||| |
|
|
| T |
10217713 |
actggaggcttctctacaggaggtttgtagaccgggggtttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggct |
10217614 |
T |
|
| Q |
225 |
tgtaaacgggtggcttgta |
243 |
Q |
| |
|
| | ||| ||||||||||| |
|
|
| T |
10217613 |
tctcaacaggtggcttgta |
10217595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 10217368 - 10217316
Alignment:
| Q |
185 |
acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg |
237 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||| || ||||| |
|
|
| T |
10217368 |
acaggtggtttgtagaccggaggcttctcaactggtggcttgtacactggtgg |
10217316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 10217863 - 10217775
Alignment:
| Q |
155 |
actggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgta |
243 |
Q |
| |
|
||||| || ||||| ||||| ||||||||||| ||||||||||| || ||||| ||||||||||| || ||||| || || |||||||| |
|
|
| T |
10217863 |
actggtggcttctcgactggaggcttgtaaaccggtggcttgtaaactggaggtttctcaactgggggtttgtagaccggaggcttgta |
10217775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 10217260 - 10217193
Alignment:
| Q |
128 |
ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt |
195 |
Q |
| |
|
|||||||| | ||| ||||||||||| ||||| |||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
10217260 |
ggaggcttttcaactggtggcttgtacactggtggtttctctactggtggcttgtaaacaggaggctt |
10217193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 10217350 - 10217283
Alignment:
| Q |
128 |
ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt |
195 |
Q |
| |
|
|||||||| | ||| ||||||||||| ||||| |||||||| || || |||||||||||||||||||| |
|
|
| T |
10217350 |
ggaggcttctcaactggtggcttgtacactggtggtttctctacaggtggcttgtaaacaggtggctt |
10217283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 10217770 - 10217643
Alignment:
| Q |
113 |
ggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttct |
212 |
Q |
| |
|
||||||||||| ||||| ||||||||||| || || ||||| || || || || | |||||| ||||| | ||||| || ||||||||||| || |||| |
|
|
| T |
10217770 |
ggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgtagaccgggggtttct |
10217671 |
T |
|
| Q |
213 |
caactggaggcttgtaaacgggtggctt |
240 |
Q |
| |
|
| ||||| |||||||| || |||||||| |
|
|
| T |
10217670 |
cgactgggggcttgtacacaggtggctt |
10217643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 10243633 - 10243530
Alignment:
| Q |
125 |
actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct |
224 |
Q |
| |
|
||||| || ||||| || ||||||||||| ||||| || ||||| ||||| || |||||||| ||||||||||| ||||| ||||| | ||| ||||| | |
|
|
| T |
10243633 |
actgggggtttgtatacaggtggcttgtaaactgggggcttctctactggtggtttgtaaactggtggcttgtacaccggtggcttgtaaacaggaggtt |
10243534 |
T |
|
| Q |
225 |
tgta |
228 |
Q |
| |
|
|||| |
|
|
| T |
10243533 |
tgta |
10243530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 10217639 - 10217565
Alignment:
| Q |
109 |
aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgta |
183 |
Q |
| |
|
|||||||||||| | ||||||||||| | ||| ||||||||||| ||||| |||||||| ||||| |||||||| |
|
|
| T |
10217639 |
aactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactggtggcttgta |
10217565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 10243750 - 10243648
Alignment:
| Q |
143 |
ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtggcttgt |
242 |
Q |
| |
|
||||||||||||||||| || || | ||| || ||||| || ||||||||||| || ||||||||||||||||| ||||||||||| || || |||| |
|
|
| T |
10243750 |
ggtggcttgtagactgggggcttgtaaacaggtggcttcactactggtggcttgtaaactggaggcttctcaactggtggcttgtaaacaggaggtttgt |
10243651 |
T |
|
| Q |
243 |
aga |
245 |
Q |
| |
|
||| |
|
|
| T |
10243650 |
aga |
10243648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 10254559 - 10254477
Alignment:
| Q |
110 |
actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtgg |
192 |
Q |
| |
|
|||||||| ||||| || || ||||| | ||| ||||||||||| ||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
10254559 |
actggtggtttctctacaggtggcttctcaactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtgg |
10254477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 10217674 - 10217565
Alignment:
| Q |
119 |
ttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactg |
218 |
Q |
| |
|
||||||||||| |||||||| || |||||||| | ||||| || || | |||||| ||||| | ||||||||||||||| || || || ||||| |||| |
|
|
| T |
10217674 |
ttctcgactgggggcttgtacacaggtggcttctcaactggtggcttataaactggaggcttctcaacaggtggcttgtacactggtggtttctctactg |
10217575 |
T |
|
| Q |
219 |
gaggcttgta |
228 |
Q |
| |
|
| |||||||| |
|
|
| T |
10217574 |
gtggcttgta |
10217565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 10217278 - 10217226
Alignment:
| Q |
185 |
acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg |
237 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| |||||||| || ||||| |
|
|
| T |
10217278 |
acaggtggtttgtagaccggaggcttttcaactggtggcttgtacactggtgg |
10217226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 10217758 - 10217700
Alignment:
| Q |
110 |
actggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctc |
168 |
Q |
| |
|
||||||||||| | |||||||| ||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
10217758 |
actggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctc |
10217700 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 10217982 - 10217936
Alignment:
| Q |
10 |
aagaatatataatccttgctttggaaactttat-tatctcttattta |
55 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
10217982 |
aagaatatatgatccttgctttggaaagtttatatatctcttattta |
10217936 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 10254259 - 10254213
Alignment:
| Q |
185 |
acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaac |
231 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||| ||||||||||| |
|
|
| T |
10254259 |
acaggtggcttgtacactggaggtttctcaactgggggcttgtaaac |
10254213 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 10254635 - 10254589
Alignment:
| Q |
139 |
aaccggtggcttgtagactggaggtttctcaactgggggcttgtaaa |
185 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| || ||||||| |
|
|
| T |
10254635 |
aaccggtggcttgtacactggaggcttctcaactggtggtttgtaaa |
10254589 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 10264717 - 10264647
Alignment:
| Q |
125 |
actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt |
195 |
Q |
| |
|
||||| ||||| | ||| ||||||||||| || ||||||||||| || || ||||||||||||||| |||| |
|
|
| T |
10264717 |
actgggggcttctcaacaggtggcttgtacaccggaggtttctctacaggtggcttgtaaacaggtagctt |
10264647 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 10243414 - 10243349
Alignment:
| Q |
149 |
ttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctca |
214 |
Q |
| |
|
|||||||| || |||||||||||||| ||||| || || ||||| | ||| ||||||||||||||| |
|
|
| T |
10243414 |
ttgtagaccgggggtttctcaactggtggcttatacaccggtggttggtaaaccggaggcttctca |
10243349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 10217425 - 10217373
Alignment:
| Q |
143 |
ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt |
195 |
Q |
| |
|
||||||||||| ||||| |||||||| || || ||||| |||||||||||||| |
|
|
| T |
10217425 |
ggtggcttgtacactggtggtttctctacaggtggcttataaacaggtggctt |
10217373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 10217458 - 10217406
Alignment:
| Q |
185 |
acaggtggcttgtagaccggaggcttctcaactggaggcttgtaaacgggtgg |
237 |
Q |
| |
|
||||| || ||||||||||| |||||||||||||| |||||||| || ||||| |
|
|
| T |
10217458 |
acagggggtttgtagaccgggggcttctcaactggtggcttgtacactggtgg |
10217406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 10217515 - 10217463
Alignment:
| Q |
143 |
ggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggctt |
195 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
10217515 |
ggtggcttgtacactggcggtttctctactggtggcttgtagacaggaggctt |
10217463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 10217785 - 10217685
Alignment:
| Q |
128 |
ggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggcttgt |
227 |
Q |
| |
|
||||||||||| || |||||||| | ||||| || || | |||||| || ||||| || ||||||||||| || ||||||||||| || ||||| |||| |
|
|
| T |
10217785 |
ggaggcttgtacacaggtggcttctctactggtggcttgtaaactggaggtttgtacaccggtggcttgtaaactggaggcttctctacaggaggtttgt |
10217686 |
T |
|
| Q |
228 |
a |
228 |
Q |
| |
|
| |
|
|
| T |
10217685 |
a |
10217685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 10254530 - 10254454
Alignment:
| Q |
109 |
aactggtggcttctcgactggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaa |
185 |
Q |
| |
|
|||||||||||| | |||||||||| | ||| ||||||||||| || || |||||||| ||||| |||||||||| |
|
|
| T |
10254530 |
aactggtggcttgtaagctggaggcttctcaactggtggcttgtatacaggtggtttctctactggtggcttgtaaa |
10254454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 10254619 - 10254515
Alignment:
| Q |
125 |
actggaggcttgtaaaccggtggcttgtagactggaggtttctcaactgggggcttgtaaacaggtggcttgtagaccggaggcttctcaactggaggct |
224 |
Q |
| |
|
||||||||||| | ||| ||||| ||||| | ||| || |||||||| || |||||||| || ||||| || | || || |||||||||||||| |||| |
|
|
| T |
10254619 |
actggaggcttctcaactggtggtttgtaaattgggggcttctcaaccggtggcttgtacactggtggtttctctacaggtggcttctcaactggtggct |
10254520 |
T |
|
| Q |
225 |
tgtaa |
229 |
Q |
| |
|
||||| |
|
|
| T |
10254519 |
tgtaa |
10254515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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