View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14146_low_31 (Length: 236)
Name: NF14146_low_31
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14146_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16128141 - 16128361
Alignment:
| Q |
1 |
ccggttcgtaaacaatgcgttaacctcttaactcttctttcgaagtttcacggtgacgctctttcgccatttttgtcgaaaatgattgctactgttcttc |
100 |
Q |
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| T |
16128141 |
ccggttcgtaaacaatgcgttaacctcttaactcttctttcgaagtttcacggtgacgctctttcgccatttttgtcgaaaatgattgctactgttcttc |
16128240 |
T |
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| Q |
101 |
gtcgcattcatgatccggatactgttgttagatctgcttgtgttgaagctgtggcggaaatgtcgttaaggattactcgaccggcgttttcggttgcgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
16128241 |
gtcgcattcatgatccggatactgttgttagatctgcttgtgttgaagctgtggcggaaatgtcgttaaggattactcgaccggcgtttgcggttgcgtt |
16128340 |
T |
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| Q |
201 |
tttaaggccgtttatggaggc |
221 |
Q |
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||| ||||||||||||||||| |
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| T |
16128341 |
tttgaggccgtttatggaggc |
16128361 |
T |
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