View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14146_low_36 (Length: 213)
Name: NF14146_low_36
Description: NF14146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14146_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 26240145 - 26240327
Alignment:
| Q |
17 |
agtttttaaatatcattgttgtatatcaaacctttatcttgtttttgtaaaatctactcgatttccttcgatcaatgtcccaattgacaccatagttcag |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
26240145 |
agtttttaaatatcattgttgtatatcaaacctttatcttgtttttgtaaaatctactcgatttccttcgatcaatgtcccaattgacaccatagttaag |
26240244 |
T |
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| Q |
117 |
tgatctaccttaaggccaatcgagagagttctttgcgttctcttct-caacattcaacttaaatacgtattatcttttttcat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
26240245 |
tgatctaccttaaggccaatcgagagagttctttgcgttctcttctacaacattcaacttaaatacgtattatcttttttcat |
26240327 |
T |
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