View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14149_high_7 (Length: 362)
Name: NF14149_high_7
Description: NF14149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14149_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 14849458 - 14849150
Alignment:
| Q |
1 |
ataggacatagttataggtgaaggcttgtgctattaattagcattggaccacataacatgcttgcaaattaatcatgagactgaaatgtgtttatgtata |
100 |
Q |
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| T |
14849458 |
ataggacatagttataggtgaaggcttgtgctattaattagcattggaccacataacatgcttgcaaattaatcatgagactgaaatgtgtttatgtata |
14849359 |
T |
|
| Q |
101 |
gctaaaattagtaagtttagatctcttaaagtcttaacatatgacatatttagtaaaaatatttaaagtgttcaacaagacgcatgctaggtagttatta |
200 |
Q |
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| T |
14849358 |
gctaaaattagtaagtttagatctcttaaagtcttaacatatgacatatttagtaaaaatatttgaagtgttcaacaagacgcatgctaggtagttatta |
14849259 |
T |
|
| Q |
201 |
gctaataatcacagaagttattacttgtgcataaagagaacacttatttgatgccaaagtcttcactagattggcaagatctaaccaacatgttataatt |
300 |
Q |
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| T |
14849258 |
gctaataatcacagaagttattacttgtgcataaagagaacacttatttgatgccaaagtcttcactagattggcaagatctaaccaacatgttataatt |
14849159 |
T |
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| Q |
301 |
ggtatatgc |
309 |
Q |
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||||||||| |
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| T |
14849158 |
ggtatatgc |
14849150 |
T |
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