View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14151_high_1 (Length: 842)
Name: NF14151_high_1
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_high_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 800; Significance: 0; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 800; E-Value: 0
Query Start/End: Original strand, 17 - 828
Target Start/End: Original strand, 14282157 - 14282968
Alignment:
| Q |
17 |
caaaggtaagaacagatacagttattgaagcagtacccagaattcccatgttaactgcaaaatagtacaagaatttcccaatccatccatgttcggcttc |
116 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282157 |
caaaggtaagaacagctacagttattgaagcagtacccagaattcccatgttaactgcaaaatagtacaagaatttcccaatccatccatgttcggcttc |
14282256 |
T |
|
| Q |
117 |
acgaaactgtcgaatcttgttaccgaagtactcttcccacgcttgaaacttaatcacacgcatgttgttaagcaactcatttgtcgccttcagcctcgaa |
216 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282257 |
acgaaactgttgaatcttgttaccgaagtactcttcccacgcttgaaacttaatcacacgcatgttgttaagcaactcatttgtcgccttcagcctcgaa |
14282356 |
T |
|
| Q |
217 |
tcacggctcctcattatctgaaactgaaaactattactactctttgttcgatatagagtaaagaaagagacaatggcaataccaagaattgatgccacga |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282357 |
tcacggctcctcattatctgaaactgaaaactattactactctttgttcgatatagagtaaagaaagagacaatggcaataccaagaattgatgccacga |
14282456 |
T |
|
| Q |
317 |
cagacacaccaacatagctatacaaaagaaacaatgcagcggaaacttgcaatggcatcaaccatataggatgaaactgcatcatcaaatctgagagttg |
416 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282457 |
cagacacgccaacatagctatacaaaagaaacaatgcagcggaaacttgcaatggcatcaaccatataggatgaaactgcatcatcaaatctgagagttg |
14282556 |
T |
|
| Q |
417 |
ttgagcatcaacagccatgtgattcacaatctgtccagttccatgagcttgtcttgaagaacttgacaaccttaagccctttttgtaaactgaagtgatt |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282557 |
ttgagcatcaacagccatgtgattcacaatctgtccagttccatgagcttgtcttgaagaacttgacaaccttaagccctttttgtaaactgaagtgatt |
14282656 |
T |
|
| Q |
517 |
atgctcgaacgaacaagcataccaagtttctgagagtggaagttgaactgatgactactaagtacttcaagtgattttgccgcaaaaaggatcgatatca |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282657 |
atgctcgaacgaacaagcataccaagtttctgagagtggaagttgaactgatgactactaagtacttcaagtgattttgccgcaaaaaggatcgatatca |
14282756 |
T |
|
| Q |
617 |
aaacaataccttcactactcgtaccatctttccttgatgtgaaatcaacaaaactctcaatcaacaagggaccaacatacataacacaaagcttaatgat |
716 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282757 |
aaacaataccttcactactcgtaccatctttccttgatgtgaaatcaacaaaactctcaatcaacaagggaccaacatacataacacaaagcttaatgat |
14282856 |
T |
|
| Q |
717 |
tgcaaggaagcccgtaaaagctatgtgtttccaaaaacacctaaaaagggtaactccaactggatgcttactattttcctctggttttggccaattgttt |
816 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14282857 |
tgcaaggaagcccgtaaaagctatgtgtttccaaaaacacctaaaaagggtaactccaactggatgcttactattttcctctggttttggccaattgttt |
14282956 |
T |
|
| Q |
817 |
tgaaaaagttct |
828 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14282957 |
tgaaaaagttct |
14282968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 17 - 827
Target Start/End: Original strand, 14320306 - 14321116
Alignment:
| Q |
17 |
caaaggtaagaacagatacagttattgaagcagtacccagaattcccatgttaactgcaaaatagtacaagaatttcccaatccatccatgttcggcttc |
116 |
Q |
| |
|
||||||||||||||| ||||| || || |||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||| |
|
|
| T |
14320306 |
caaaggtaagaacagttacagctaatggggcagtacccaaaactcctatgttaactgcaaaatagtacaagaatttcgcaatccatccatgctcagcttc |
14320405 |
T |
|
| Q |
117 |
acgaaactgtcgaatcttgttaccgaagtactcttcccacgcttgaaacttaatcacacgcatgttgttaagcaactcatttgtcgccttcagcctcgaa |
216 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
14320406 |
gcgaaactgttgaattttgttaccaaagtactcttcccacgcttgaaacttaatcacacgcatgttgttaagtaactcgtttgtcgccttcatcctcgaa |
14320505 |
T |
|
| Q |
217 |
tcacggctcctcattatctgaaactgaaaactattactactctttgttcgatatagagtaaagaaagagacaatggcaataccaagaattgatgccacga |
316 |
Q |
| |
|
|| |||||| ||||||||| |||||| ||||||||||||||||| |||||||| || || |||| | | || ||| | | |||| | || ||| | | |
|
|
| T |
14320506 |
tcgcggctcgtcattatcttaaactggaaactattactactcttcgttcgatagagtgtgaagagaaacactatgctagttccaaacactgctgcaagta |
14320605 |
T |
|
| Q |
317 |
cagacacaccaacatagctatacaaaagaaacaatgcagcggaaacttgcaatggcatcaaccatataggatgaaactgcatcatcaaatctgagagttg |
416 |
Q |
| |
|
| || | |||||||||||| |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
14320606 |
ctgatagaccaacatagctgtacataagagccaatgcagcaccaacttgcaatggcatcaaccatataggatgaaactgcatcatcaaatctgagagctg |
14320705 |
T |
|
| Q |
417 |
ttgagcatcaacagccatgtgattcacaatctgtccagttccatgagcttgtcttgaagaacttgacaaccttaagccctttttgtaaactgaagtgatt |
516 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14320706 |
ttgagcatcaacagccatgtgattaacaatttggccagttccatgagcttgtcttgaagaacttgacaaccttaaaccctttttgtaaactgaagtgatt |
14320805 |
T |
|
| Q |
517 |
atgctcgaacgaacaagcataccaagtttctgagagtggaagttgaactgatgactactaagtacttcaagtgattttgccgcaaaaaggatcgatatca |
616 |
Q |
| |
|
||||||||||||| ||||||||| ||||| |||||||||||||| || |||||| |||||||||||||| ||||||||| |||||||||| |||||| |
|
|
| T |
14320806 |
atgctcgaacgaataagcataccgagtttttgagagtggaagttaaattgatgaacactaagtacttcaactgattttgctgcaaaaaggacacatatca |
14320905 |
T |
|
| Q |
617 |
aaacaataccttcactactcgtaccatctttccttgatgtgaaatcaacaaaactctcaatcaacaagggaccaacatacataacacaaagcttaatgat |
716 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14320906 |
aaacaataccttcactagtcgtactatctttccttgatgtgaaatcaacaaaactttgaatcaacaagggaccaacatacataacacaaagcctaatgac |
14321005 |
T |
|
| Q |
717 |
tgcaaggaagcccgtaaaagctatgtgtttccaaaaacacctaaaaagggtaactccaactggatgcttactattttcctctggttttggccaattgttt |
816 |
Q |
| |
|
||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
14321006 |
tgcaatgaagcccgtgaaagctatttgtttccaaaaacacctaaaaagggtaactccaactggatgcttactgttttcctctggttttggccaattgctt |
14321105 |
T |
|
| Q |
817 |
tgaaaaagttc |
827 |
Q |
| |
|
||||||||||| |
|
|
| T |
14321106 |
tgaaaaagttc |
14321116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 60 - 827
Target Start/End: Original strand, 14303958 - 14304725
Alignment:
| Q |
60 |
tcccatgttaactgcaaaatagtacaagaatttcccaatccatccatgttcggcttcacgaaactgtcgaatcttgttaccgaagtactcttcccacgct |
159 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
14303958 |
tcccatgttcacagcaaaatagtacaagaatttcccaatccatccatgttcggcttcacgaaactgttgaatcttgttcccgaagtactcttcccacgct |
14304057 |
T |
|
| Q |
160 |
tgaaacttaatcacacgcatgttgttaagcaactcatttgtcgccttcagcctcgaatcacggctcctcattatctgaaactgaaaactattactactct |
259 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||| |||||||| ||||||||||| ||||||| ||| |
|
|
| T |
14304058 |
tgaaatttaatcacacgcatgttgttaagcaactcattcgttgacttcattctcgaatcgcggctcatcattatccgaaactgaaaaacattactattct |
14304157 |
T |
|
| Q |
260 |
ttgttcgatatagagtaaagaaagagacaatggcaataccaagaattgatgccacgacagacacaccaacatagctatacaaaagaaacaatgcagcgga |
359 |
Q |
| |
|
| | ||||||| ||| ||| | ||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
14304158 |
tcgatcgatatgcagtgaagcagaagacaatggcagtaccaagaattgctgcaacgacagatacaccaacatagctatacataagagccaatgcagcggc |
14304257 |
T |
|
| Q |
360 |
aacttgcaatggcatcaaccatataggatgaaactgcatcatcaaatctgagagttgttgagcatcaacagccatgtgattcacaatctgtccagttcca |
459 |
Q |
| |
|
|||||| |||||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14304258 |
aacttgtaatggcatcatccaaataggatgaaactgcttcatcaagtctgagagttgttgagcatcaacagccatgtgattcacaatctgtccagttcca |
14304357 |
T |
|
| Q |
460 |
tgagcttgtcttgaagaacttgacaaccttaagccctttttgtaaactgaagtgattatgctcgaacgaacaagcataccaagtttctgagagtggaagt |
559 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |
|
|
| T |
14304358 |
tgagcctgtcttgaagaacttgacaaccttaaaccctttttgtaaaccgaagtgattatgctcgagcgaacaagcatacctagtttctgagaatggaagt |
14304457 |
T |
|
| Q |
560 |
tgaactgatgactactaagtacttcaagtgattttgccgcaaaaaggatcgatatcaaaacaataccttcactactcgtaccatctttccttgatgtgaa |
659 |
Q |
| |
|
|||| |||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||| || ||||||| ||||||||| |
|
|
| T |
14304458 |
tgaattgatgaacactaagtacttcaacagattttgctgcaaaaaggacacatatcaaaacaataccttcactagtcggactatctttctgtgatgtgaa |
14304557 |
T |
|
| Q |
660 |
atcaacaaaactctcaatcaacaagggaccaacatacataacacaaagcttaatgattgcaaggaagcccgtaaaagctatgtgtttccaaaaacaccta |
759 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||| |||||||||||||||||| | |||| |||||| ||||| || ||| ||||||||||||||||||||||| |
|
|
| T |
14304558 |
atcaacaaaactctgaatcagcaatggaccgacatacataacacaaagcctcatgaatgcaagaaagccagtgaaaactatgtgtttccaaaaacaccta |
14304657 |
T |
|
| Q |
760 |
aaaagggtaactccaactggatgcttactattttcctctggttttggccaattgttttgaaaaagttc |
827 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14304658 |
aaaagggtaactccaactggatgcttactgttttcctctggtttcggccaattgttttgaaaaagttc |
14304725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 403; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 66 - 816
Target Start/End: Original strand, 25885037 - 25885787
Alignment:
| Q |
66 |
gttaactgcaaaatagtacaagaatttcccaatccatccatgttcggcttcacgaaactgtcgaatcttgttaccgaagtactcttcccacgcttgaaac |
165 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
25885037 |
gttaacagcaaaatagtacatgaatttcccaatccatccatgctcggattcacgaaactgtttaatcttgttaccgaaatactcttcccaagcttgaaac |
25885136 |
T |
|
| Q |
166 |
ttaatcacacgcatgttgttaagcaactcatttgtcgccttcagcctcgaatcacggctcctcattatctgaaactgaaaactattactactctttgttc |
265 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||| || || |||| |||||||||||||| | ||||||||||| |||| |
|
|
| T |
25885137 |
ttaatcacacgcatgttgttaagcaactcatttgtcgccttcatcctcgaatcgcgacttgtcatcatctgaaactgaaagttgttactactcttggttc |
25885236 |
T |
|
| Q |
266 |
gatatagagtaaagaaagagacaatggcaataccaagaattgatgccacgacagacacaccaacatagctatacaaaagaaacaatgcagcggaaacttg |
365 |
Q |
| |
|
||||||| | || | | | || ||| | | ||||| | || ||| | || || ||||||||||||||||||| |||| |||||| | | ||||| |
|
|
| T |
25885237 |
gatatagcgcgaaaagaaacactatgctagttccaagcaatgctgcaagtactgatacaccaacatagctatacataagagccaatgccacagctacttg |
25885336 |
T |
|
| Q |
366 |
caatggcatcaaccatataggatgaaactgcatcatcaaatctgagagttgttgagcatcaacagccatgtgattcacaatctgtccagttccatgagct |
465 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
25885337 |
caatggcatcaaccatatagggtgaagctgcatcatcatatctgagagttgttgagcatcaacagccatgtgattcactatctgtcctgttccatgagct |
25885436 |
T |
|
| Q |
466 |
tgtcttgaagaacttgacaaccttaagccctttttgtaaactgaagtgattatgctcgaacgaacaagcataccaagtttctgagagtggaagttgaact |
565 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||||||| ||||||||| | |||||| |||||||||||| | | |
|
|
| T |
25885437 |
tgtcttgaagaacttgacaacctcagaccctttttgtaaaccgaagtaattatgctcgaacgaataagcataccgattttctgcgagtggaagttgtatt |
25885536 |
T |
|
| Q |
566 |
gatgactactaagtacttcaagtgattttgccgcaaaaaggatcgatatcaaaacaataccttcactactcgtaccatctttccttgatgtgaaatcaac |
665 |
Q |
| |
|
||||| ||| || ||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| | |||| |||||||||||||||||||||||| |
|
|
| T |
25885537 |
gatgaacactcagcacttcaactgattttgctgcaaaaaggatcaatatcaaaataataccttcactagtagtactatctttccttgatgtgaaatcaac |
25885636 |
T |
|
| Q |
666 |
aaaactctcaatcaacaagggaccaacatacataacacaaagcttaatgattgcaaggaagcccgtaaaagctatgtgtttccaaaaacacctaaaaagg |
765 |
Q |
| |
|
|||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||||| | | |
|
|
| T |
25885637 |
aaaactctgaatcaacagtggaccaatatacataacacaaagcctaatcattgcaaggaagccagtgaaagctatgtgtttccaaaaacacctaaataag |
25885736 |
T |
|
| Q |
766 |
gtaactccaactggatgcttactattttcctctggttttggccaattgttt |
816 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25885737 |
gctactataactggatgcttactattttcctctggttttggccaattgttt |
25885787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 361 - 816
Target Start/End: Original strand, 44349177 - 44349631
Alignment:
| Q |
361 |
acttgcaatggcatcaaccatataggatgaaactgcatcatcaaatctgagagttgttgagcatcaacagccatgtgattcacaatctgtccagttccat |
460 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| |
|
|
| T |
44349177 |
acttgcaatggcatcaaccatatagggtgaagctgcatcatcatatctgagagttgttgagcatcaacagacatgtgattcactatctgtcctgttccat |
44349276 |
T |
|
| Q |
461 |
gagcttgtcttgaagaacttgacaaccttaagccctttttgtaaactgaagtgattatgctcgaacgaacaagcataccaagtttctgagagtggaagtt |
560 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||| | |||||| ||||||||||| |
|
|
| T |
44349277 |
gagcttgtcttgaagaacttgacaatcttagaccctttttgtaaaccaaagtgattatgctcgaacgaataagcataccgattttctgcgagtggaagtt |
44349376 |
T |
|
| Q |
561 |
gaactgatgactactaagtacttcaagtgattttgccgcaaaaaggatcgatatcaaaacaataccttcactactcgtaccatctttccttgatgtgaaa |
660 |
Q |
| |
|
| | ||||||| ||| |||||||||| ||||||||| |||||||||||| ||||||||| |||| |||||||| | |||| ||||||||||||||| ||| |
|
|
| T |
44349377 |
gtattgatgac-actcagtacttcaactgattttgctgcaaaaaggatcaatatcaaaataatatcttcactagtagtactatctttccttgatgtaaaa |
44349475 |
T |
|
| Q |
661 |
tcaacaaaactctcaatcaacaagggaccaacatacataacacaaagcttaatgattgcaaggaagcccgtaaaagctatgtgtttccaaaaacacctaa |
760 |
Q |
| |
|
||||||||||||| |||||||| ||||||| |||||||||||||||| |||| | |||||||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
44349476 |
tcaacaaaactctgaatcaacagtggaccaatatacataacacaaagcctaatcactgcaaggaagccagtgatagctatgtgtttccaaaaacacctaa |
44349575 |
T |
|
| Q |
761 |
aaagggtaactccaactggatgcttactattttcctctggttttggccaattgttt |
816 |
Q |
| |
|
| | || || ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
44349576 |
ataaggctaccataactggatgcttactgttttcctctggttttggccaattgttt |
44349631 |
T |
|
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