View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_high_17 (Length: 437)
Name: NF14151_high_17
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 49912081 - 49911660
Alignment:
| Q |
1 |
acaagttagtatcaagtagaaaagtaaatgtgttgtaccaataaataaa-taaataagagattgtgaaattgctcaagccttctggggtaatcgtattca |
99 |
Q |
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| T |
49912081 |
acaagttagtatcaagtagaaaagtaaatgtgtagtaccaataaataaaataaataagagattgtgaagttgctcaagccttccgggataatcgtattca |
49911982 |
T |
|
| Q |
100 |
gtctgataaattgagcaaaatcttcaatttaggtctctactctttgcttgattgcaacttatctaatgatgatttgggaatgaactctaccaacaggtct |
199 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49911981 |
gtctgataaatggagcaaaatcttcaatttaggtctctactctttgcttgattgcaacttatctaatgatgatttgggaatgaactctaccaacaggtct |
49911882 |
T |
|
| Q |
200 |
atcttatttggtggtgttgttagatatttagaaccaaatcaaaatcattcaactataaattttaaccgattcgaacataatctagcgtggctttgaaatt |
299 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
49911881 |
atcttatttggtggtgttgttagatatttagaaccaagtcaaaatcattcaactataaattttaaccgattcgaacataatctagcgtggcttcgaaatt |
49911782 |
T |
|
| Q |
300 |
caattaatgatttttacattaaaataaacaaggtatcaatatcaaacaacatgaatatccatgagggattacatttactagtcttcttggtcaagctgag |
399 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
49911781 |
caattaacgatttttacattaaaataaacaaggtatcaatatcaaacaacatgaatatccacgagggattacatttactagtcttcttggtcaagctgag |
49911682 |
T |
|
| Q |
400 |
gattttgcgtatctaatttttg |
421 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
49911681 |
gattttgcgtatctaatttttg |
49911660 |
T |
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