View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14151_high_23 (Length: 409)

Name: NF14151_high_23
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14151_high_23
NF14151_high_23
[»] chr5 (20 HSPs)
chr5 (143-397)||(42552411-42552664)
chr5 (47-143)||(37321587-37321688)
chr5 (47-143)||(4892372-4892473)
chr5 (47-142)||(8145543-8145643)
chr5 (47-142)||(33584124-33584224)
chr5 (47-152)||(3521793-3521902)
chr5 (47-144)||(25398408-25398510)
chr5 (47-142)||(6043307-6043407)
chr5 (47-139)||(12850972-12851069)
chr5 (47-143)||(14138837-14138938)
chr5 (47-142)||(38899520-38899621)
chr5 (47-142)||(2477806-2477906)
chr5 (47-141)||(3362949-3363048)
chr5 (47-143)||(12614531-12614633)
chr5 (47-92)||(4433858-4433903)
chr5 (57-143)||(17545476-17545567)
chr5 (57-142)||(22912852-22912942)
chr5 (47-121)||(11360947-11361026)
chr5 (162-252)||(13361000-13361089)
chr5 (112-148)||(10458471-10458507)
[»] chr7 (20 HSPs)
chr7 (47-144)||(3962148-3962250)
chr7 (47-142)||(24395141-24395241)
chr7 (50-144)||(15577640-15577739)
chr7 (47-143)||(35445567-35445668)
chr7 (47-142)||(34483008-34483108)
chr7 (47-142)||(35876414-35876514)
chr7 (47-144)||(15329444-15329546)
chr7 (47-152)||(45637881-45637991)
chr7 (47-143)||(42611981-42612082)
chr7 (47-140)||(4974532-4974630)
chr7 (47-143)||(48880721-48880822)
chr7 (47-142)||(30848739-30848839)
chr7 (55-143)||(42696261-42696355)
chr7 (63-142)||(25167651-25167735)
chr7 (57-143)||(15238564-15238655)
chr7 (47-92)||(29737314-29737359)
chr7 (50-140)||(20009895-20009991)
chr7 (57-92)||(37476930-37476965)
chr7 (189-270)||(37327297-37327375)
chr7 (162-270)||(29366575-29366680)
[»] chr4 (30 HSPs)
chr4 (47-150)||(46442014-46442122)
chr4 (47-144)||(22199429-22199531)
chr4 (47-147)||(49387677-49387782)
chr4 (47-142)||(33530479-33530579)
chr4 (47-145)||(2625007-2625110)
chr4 (47-152)||(44893596-44893706)
chr4 (47-147)||(53123201-53123306)
chr4 (47-142)||(36073519-36073619)
chr4 (47-144)||(31078612-31078714)
chr4 (47-144)||(47290236-47290338)
chr4 (47-143)||(7744906-7745007)
chr4 (47-143)||(21802114-21802215)
chr4 (47-143)||(44893007-44893108)
chr4 (47-149)||(9089040-9089147)
chr4 (47-153)||(24128409-24128520)
chr4 (47-145)||(36073121-36073224)
chr4 (47-148)||(4751617-4751723)
chr4 (47-148)||(50156368-50156473)
chr4 (48-143)||(10442581-10442682)
chr4 (47-132)||(23964269-23964359)
chr4 (47-96)||(17655600-17655649)
chr4 (47-96)||(37934788-37934837)
chr4 (50-144)||(11314044-11314144)
chr4 (47-144)||(37219801-37219904)
chr4 (190-267)||(12499018-12499092)
chr4 (47-96)||(30563379-30563428)
chr4 (57-140)||(24392854-24392942)
chr4 (91-142)||(42671887-42671939)
chr4 (221-270)||(44362912-44362959)
chr4 (91-142)||(25063369-25063421)
[»] chr3 (34 HSPs)
chr3 (47-144)||(48161076-48161178)
chr3 (47-142)||(19650695-19650795)
chr3 (47-145)||(3137206-3137309)
chr3 (47-145)||(6042047-6042150)
chr3 (47-145)||(34482680-34482783)
chr3 (47-145)||(37216845-37216948)
chr3 (47-142)||(3089589-3089689)
chr3 (47-150)||(3456234-3456342)
chr3 (47-142)||(3574321-3574421)
chr3 (47-144)||(22426138-22426240)
chr3 (47-144)||(33113964-33114066)
chr3 (47-147)||(30385570-30385675)
chr3 (47-141)||(8320378-8320477)
chr3 (47-142)||(37522223-37522323)
chr3 (47-142)||(2754889-2754989)
chr3 (55-144)||(36864825-36864920)
chr3 (47-140)||(33145882-33145980)
chr3 (47-142)||(47738281-47738382)
chr3 (57-146)||(8361830-8361924)
chr3 (47-142)||(26612916-26613017)
chr3 (48-142)||(24343720-24343820)
chr3 (57-145)||(40328011-40328105)
chr3 (47-141)||(46919064-46919164)
chr3 (47-142)||(42298032-42298122)
chr3 (47-130)||(33839705-33839794)
chr3 (57-143)||(41224414-41224505)
chr3 (47-140)||(42921295-42921394)
chr3 (57-142)||(9796824-9796914)
chr3 (190-270)||(25189649-25189726)
chr3 (199-248)||(38018268-38018316)
chr3 (190-270)||(38018459-38018536)
chr3 (190-270)||(38216334-38216411)
chr3 (196-270)||(39450620-39450691)
chr3 (47-84)||(11347439-11347476)
[»] chr8 (30 HSPs)
chr8 (47-143)||(15187730-15187831)
chr8 (47-141)||(14129029-14129128)
chr8 (47-144)||(1645757-1645859)
chr8 (47-140)||(24211169-24211267)
chr8 (47-147)||(17841640-17841745)
chr8 (47-143)||(26041907-26042008)
chr8 (47-143)||(40779923-40780024)
chr8 (47-142)||(6108028-6108128)
chr8 (47-142)||(25581034-25581134)
chr8 (47-130)||(32394027-32394114)
chr8 (47-143)||(32064916-32065017)
chr8 (47-143)||(37985850-37985951)
chr8 (47-142)||(3596836-3596936)
chr8 (47-142)||(10044518-10044618)
chr8 (47-142)||(42754837-42754937)
chr8 (53-143)||(1503637-1503732)
chr8 (47-140)||(20091598-20091696)
chr8 (47-140)||(34665551-34665649)
chr8 (47-131)||(39772608-39772697)
chr8 (48-140)||(38017103-38017201)
chr8 (47-142)||(30055686-30055786)
chr8 (47-92)||(8454003-8454048)
chr8 (47-130)||(35353211-35353299)
chr8 (59-144)||(31347569-31347659)
chr8 (48-140)||(37132477-37132575)
chr8 (55-96)||(41819614-41819655)
chr8 (50-144)||(27835256-27835345)
chr8 (162-247)||(3207640-3207724)
chr8 (57-144)||(7022159-7022251)
chr8 (112-148)||(24844649-24844685)
[»] chr6 (19 HSPs)
chr6 (47-142)||(18365369-18365469)
chr6 (47-142)||(18370633-18370733)
chr6 (47-142)||(17175816-17175916)
chr6 (47-142)||(33695121-33695221)
chr6 (47-146)||(33696867-33696971)
chr6 (47-144)||(32702375-32702477)
chr6 (47-145)||(23290873-23290976)
chr6 (47-144)||(28675318-28675420)
chr6 (50-131)||(6031546-6031632)
chr6 (47-144)||(17705262-17705363)
chr6 (47-152)||(2309208-2309318)
chr6 (47-92)||(18889494-18889539)
chr6 (47-92)||(6127447-6127492)
chr6 (57-147)||(11548379-11548474)
chr6 (47-148)||(29693615-29693722)
chr6 (106-142)||(2121004-2121040)
chr6 (112-142)||(582522-582552)
chr6 (91-141)||(34238883-34238933)
chr6 (47-79)||(9752109-9752141)
[»] chr1 (21 HSPs)
chr1 (47-146)||(44094867-44094971)
chr1 (47-144)||(41876235-41876337)
chr1 (47-144)||(51737675-51737777)
chr1 (47-142)||(3559787-3559887)
chr1 (47-142)||(25463846-25463946)
chr1 (47-142)||(37821629-37821729)
chr1 (47-153)||(19015574-19015685)
chr1 (47-144)||(20304923-20305025)
chr1 (47-144)||(36966501-36966603)
chr1 (47-142)||(9910086-9910186)
chr1 (47-142)||(25973577-25973677)
chr1 (47-145)||(18404618-18404721)
chr1 (47-141)||(40215158-40215257)
chr1 (47-142)||(6883657-6883757)
chr1 (47-151)||(10167569-10167679)
chr1 (71-142)||(19722894-19722970)
chr1 (57-144)||(33786424-33786516)
chr1 (57-140)||(40273888-40273976)
chr1 (57-142)||(32000061-32000151)
chr1 (190-270)||(42508255-42508332)
chr1 (112-145)||(27523047-27523080)
[»] chr2 (20 HSPs)
chr2 (47-153)||(13355018-13355129)
chr2 (47-142)||(10662058-10662158)
chr2 (47-142)||(33380377-33380477)
chr2 (47-142)||(35160929-35161029)
chr2 (47-153)||(23267846-23267957)
chr2 (47-138)||(3989246-3989342)
chr2 (47-142)||(7475303-7475403)
chr2 (47-142)||(9293370-9293470)
chr2 (47-139)||(31174633-31174730)
chr2 (57-143)||(43331092-43331183)
chr2 (47-92)||(21936252-21936297)
chr2 (57-142)||(9723586-9723677)
chr2 (47-144)||(22592880-22592985)
chr2 (47-96)||(16767308-16767357)
chr2 (57-146)||(34320959-34321042)
chr2 (97-142)||(39819272-39819317)
chr2 (57-140)||(21393483-21393570)
chr2 (57-96)||(37335824-37335863)
chr2 (221-270)||(40609939-40609986)
chr2 (47-96)||(14941210-14941259)
[»] scaffold0228 (3 HSPs)
scaffold0228 (47-144)||(26106-26208)
scaffold0228 (47-144)||(16154-16256)
scaffold0228 (47-80)||(8572-8605)
[»] scaffold0178 (1 HSPs)
scaffold0178 (47-142)||(11791-11891)
[»] scaffold0096 (1 HSPs)
scaffold0096 (47-142)||(41180-41280)
[»] scaffold0204 (1 HSPs)
scaffold0204 (47-142)||(4566-4666)
[»] scaffold0085 (1 HSPs)
scaffold0085 (47-142)||(48019-48119)
[»] scaffold0471 (1 HSPs)
scaffold0471 (47-153)||(13012-13123)
[»] scaffold0157 (1 HSPs)
scaffold0157 (190-267)||(21385-21459)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 143 - 397
Target Start/End: Complemental strand, 42552664 - 42552411
Alignment:
Q  143 ttaaattaatggtctcatgatattttagacaaaatatgtgttaggaagaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtga 242  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||  ||||||||||    
T  42552664 ttaaattaatggtatcatcatattttagacaaaatatgtgttagggagatcagaactgtcgaattttaaaatacagg-gaccaattctacaaaatggtga 42552566  T
Q  243 aaatagagggggaccaaaactgcaattatgctaaaataaatagaagtaaaatacaaacacgatggaagtgatttgaaaggattagtagttattatttaaa 342  Q
    ||||||||||||| | ||||||||| || |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  42552565 aaatagagggggatcgaaactgcaactaagctaaaataaatagaagtgaaatacgaacacgatggaagtgatttgaaaggattagcagttattatttaaa 42552466  T
Q  343 taaaaaagaaaccttcgcacnnnnnnnctattaaactgaaaccacatacagagaa 397  Q
    ||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  42552465 taaaaaagaaaccttcgcactttttttctattaaactaaaaccacatacagagaa 42552411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 37321688 - 37321587
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T
Q  142 ct 143  Q
    ||    
T  37321588 ct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 4892372 - 4892473
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T
Q  142 ct 143  Q
    ||    
T  4892472 ct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 8145543 - 8145643
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  142 c 142  Q
    |    
T  8145643 c 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 33584224 - 33584124
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T
Q  142 c 142  Q
    |    
T  33584124 c 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 3521902 - 3521793
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T
Q  142 cttaaattaat 152  Q
    | |||||||||    
T  3521802 c-taaattaat 3521793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 25398408 - 25398510
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||| ||| || ||| |||||||||||||||||||||||| |||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T
Q  142 ctt 144  Q
    |||    
T  25398508 ctt 25398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 6043407 - 6043307
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  142 c 142  Q
    |    
T  6043307 c 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattt 139  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 14138837 - 14138938
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||| ||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||| ||||||| |||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T
Q  142 ct 143  Q
    ||    
T  14138937 ct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 38899621 - 38899520
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttgga-tattttttataaaatcattcttgatatctaacatttt 140  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     ||||||||||| | | |||||||||||||||||||||||||||| ||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T
Q  141 cc 142  Q
    ||    
T  38899521 cc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 2477806 - 2477906
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||     |||||||||| ||| ||| |||||||||||||||||||||||| |||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T
Q  142 c 142  Q
    |    
T  2477906 c 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||     ||||  || ||| |||||||||||||||||||||||| |||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatatttttt-ataaaatcattcttgatatctaacatttt 140  Q
    ||||||| ||||||||||||||||||||||||||||||||||||     ||||||||||  || |||||| |||||||||| ||||||||||| ||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  141 cct 143  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 4433903 - 4433858
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 92  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtg 4433858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttcct 143  Q
    |||||||||||||||||||||| | |||||||||||||||     ||||  |||||||||   ||||||||||||||||||| |||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    |||||||||||||||||||||| |||||||||||||     ||||||||| || ||| ||   ||||||||||||||||||| ||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 11361026 - 11360947
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcat 121  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||     ||||||||||| || ||| ||||||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 13361089 - 13361000
Alignment:
Q  162 atattttagacaaaatatgtgttaggaagaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagaggg 252  Q
    ||||||||||||||||||||| |||  ||| || || ||||||||||||||||| | |||| |||||  | |||||  |||||||||||||    
T  13361089 atattttagacaaaatatgtgatagagagatcaaaattgtcgaattttaaaata-aggagatcaatttcgcaaaataatgaaaatagaggg 13361000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 10458471 - 10458507
Alignment:
Q  112 ataaaatcattcttgatatctaacattttccttaaat 148  Q
    |||||||||||||| |||||||||||||| |||||||    
T  10458471 ataaaatcattcttaatatctaacatttttcttaaat 10458507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 3962148 - 3962250
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T
Q  142 ctt 144  Q
    |||    
T  3962248 ctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 24395141 - 24395241
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T
Q  142 c 142  Q
    |    
T  24395241 c 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 15577739 - 15577640
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttcctt 144  Q
    |||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctt 15577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  142 ct 143  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||| ||||||||||||||||||||||     ||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  142 c 142  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||| || ||||||| |||||||||||||||||||||||| |||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  142 c 142  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 15329444 - 15329546
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||| ||||||||||     ||||||||||| |||||| |||||||||||||||| ||||||| |||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  142 ctt 144  Q
    |||    
T  15329544 ctt 15329546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 45637881 - 45637991
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||| ||||||| |||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  142 cttaaattaat 152  Q
    || ||| ||||    
T  45637981 ctaaaaataat 45637991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 42611981 - 42612082
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||| ||||||||||||||||||||||||||     |||||||||| ||| ||| |||||||||||||||||||||||| |||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T
Q  142 ct 143  Q
    ||    
T  42612081 ct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||     ||||||||| || |||||||||||||||||||||||||||| ||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 48880822 - 48880721
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T
Q  142 ct 143  Q
    ||    
T  48880722 ct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 30848739 - 30848839
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||| |||||||||||||||     ||||||||||| || ||| |||||||| ||||||||||||||| |||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  142 c 142  Q
    |    
T  30848839 c 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 42696261 - 42696355
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatatttttt-ataaaatcattcttgatatctaacattttcct 143  Q
    |||||||||||||||||||||||| |||||||||||     ||||||||||| || |||||| ||||||||||| ||||||||||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  63 tgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    ||||||||||||||||||||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| ||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttcct 143  Q
    |||||||||||||||||||||| | |||||||||||||||     ||||  |||||||||   ||||||||||||||||||| |||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 29737314 - 29737359
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 92  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtg 29737359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatatttttt-ataaaatcattcttgatatctaacatttt 140  Q
    |||| ||||||||||||||| ||||||||   |||||||||||     ||||||||| || |||||| |||||||||||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 37476965 - 37476930
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg 92  Q
    |||||||||||||||||||||| |||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtg 37476930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 37327375 - 37327297
Alignment:
Q  189 agaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    |||||| || |||||||||||||||||   | ||||| ||||| ||||||||||||||  ||||||| ||||||||||||||    
T  37327375 agaccaaaattgtcgaattttaaaatagggg-gaccatttctgcaaaatggtgaaaat--agggggatcaaaactgcaatta 37327297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 29366575 - 29366680
Alignment:
Q  162 atattttagacaaaatatgtgttaggaagaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaa 261  Q
    |||||||||||||||||| || ||| | ||||| || |||| ||| |||||||| | || | ||||| || ||| || ||||||||||  ||||||||||    
T  29366575 atattttagacaaaatatttgatagaatgaccaaaattgtcaaatattaaaatagagga-atcaattttgcaaattgatgaaaataga--gggaccaaaa 29366671  T
Q  262 ctgcaatta 270  Q
    |||||||||    
T  29366672 ctgcaatta 29366680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 46442014 - 46442122
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T
Q  142 cttaaatta 150  Q
    |||||||||    
T  46442114 cttaaatta 46442122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 22199429 - 22199531
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  142 ctt 144  Q
    |||    
T  22199529 ctt 22199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 49387782 - 49387677
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||| |||||||||||||||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  142 cttaaa 147  Q
    ||||||    
T  49387682 cttaaa 49387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||     |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  142 c 142  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 2625007 - 2625110
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||| ||| || ||| ||||||||||||||||||||||||||||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  142 ctta 145  Q
    ||||    
T  2625107 ctta 2625110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 44893596 - 44893706
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T
Q  142 cttaaattaat 152  Q
    | |||||||||    
T  44893696 cataaattaat 44893706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 53123201 - 53123306
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||| |||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T
Q  142 cttaaa 147  Q
    ||||||    
T  53123301 cttaaa 53123306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 36073519 - 36073619
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T
Q  142 c 142  Q
    |    
T  36073619 c 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 31078714 - 31078612
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||     ||||||||| || |||||||||||||||||||||||||||| |||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T
Q  142 ctt 144  Q
    |||    
T  31078614 ctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 47290236 - 47290338
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||| |||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T
Q  142 ctt 144  Q
    |||    
T  47290336 ctt 47290338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 7745007 - 7744906
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||     ||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T
Q  142 ct 143  Q
    ||    
T  7744907 ct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 21802215 - 21802114
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||| |||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  142 ct 143  Q
    ||    
T  21802115 ct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 44893108 - 44893007
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T
Q  142 ct 143  Q
    ||    
T  44893008 ct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 9089040 - 9089147
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||| |||||||||     ||||||||||| || ||| |||||||||||||||||||||||| ||||||     
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttt 9089139  T
Q  142 cttaaatt 149  Q
    | ||||||    
T  9089140 cataaatt 9089147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 24128409 - 24128520
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||     ||||  || ||| |||||||||||||||||||||||| ||||||     
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttt 24128508  T
Q  142 cttaaattaatg 153  Q
    ||||||| ||||    
T  24128509 cttaaataaatg 24128520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 36073121 - 36073224
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     ||||||||||| || ||| ||||||||||||| |||||||||| |||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  142 ctta 145  Q
    ||||    
T  36073221 ctta 36073224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 4751617 - 4751723
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     ||||||||||  || ||| ||||||||| |||||||||||||| |||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T
Q  142 cttaaat 148  Q
    |||||||    
T  4751717 cttaaat 4751723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 50156473 - 50156368
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattatt-----gtgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||| ||||||||||||      ||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  50156473 atgaaagattaataaatgagactgaaatct-aaggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T
Q  142 cttaaat 148  Q
    || ||||    
T  50156374 ctaaaat 50156368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 10442682 - 10442581
Alignment:
Q  48 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  142 ct 143  Q
    ||    
T  10442582 ct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattatt-----gtgtcattcttggatattttttataaaatcattcttgatatct 132  Q
    ||||||||||||||||||||| |||||||||||| ||||||||      ||||||||||  || ||| |||||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 17655600 - 17655649
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcat 17655649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 37934837 - 37934788
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcat 37934788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 11314144 - 11314044
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatatttttt-ataaaatcattcttgatatctaacattttcct 143  Q
    |||| ||||||||| |||||  ||||||| |||||||||||||||||     ||||| || ||| || |||||||||||||||||||||| |||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  144 t 144  Q
    |    
T  11314044 t 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 37219801 - 37219904
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatatttttt-ataaaatcattcttgatatctaacatttt 140  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||     ||||||||  || ||| || |||||||||||||||||||||||||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  141 cctt 144  Q
    ||||    
T  37219901 cctt 37219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 12499092 - 12499018
Alignment:
Q  190 gaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaa 267  Q
    ||||| ||||||||||||||||||||   | ||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  12499092 gaccaaaactgtcgaattttaaaatagggg-gaccaattctgcaaaatggtgaaaat--agggggatcaaaactgcaa 12499018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 30563379 - 30563428
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    ||||||| ||||||||| ||||||||||||||  ||||||||||||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcat 30563428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    |||||||||||||||||||||| | |||||||||||     ||||||||  |||||| ||   ||||||||||||||||||| ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 42671887 - 42671939
Alignment:
Q  91 tgtcattcttggatatttttt-ataaaatcattcttgatatctaacattttcc 142  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||    
T  42671887 tgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 44362959 - 44362912
Alignment:
Q  221 gaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||||||||  ||||||||||||||||  ||||||||||||||||||||    
T  44362959 gaccaattctacaaaatggtgaaaatag--ggggaccaaaactgcaatta 44362912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 25063421 - 25063369
Alignment:
Q  91 tgtcattcttggatatttttt-ataaaatcattcttgatatctaacattttcc 142  Q
    ||||||||||| || ||| || |||||||||||||||||||||| ||||||||    
T  25063421 tgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 48161076 - 48161178
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtca-----ttcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||     ||||||||||||| |||||||||||||||||||||||| |||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  142 ctt 144  Q
    |||    
T  48161176 ctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 19650795 - 19650695
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T
Q  142 c 142  Q
    |    
T  19650695 c 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 3137309 - 3137206
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T
Q  142 ctta 145  Q
    ||||    
T  3137209 ctta 3137206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 6042047 - 6042150
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||| |||||||||||||||||||||||||||||||||||||||     |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  142 ctta 145  Q
    ||||    
T  6042147 ctta 6042150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 34482783 - 34482680
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  142 ctta 145  Q
    ||||    
T  34482683 ctta 34482680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 37216948 - 37216845
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  142 ctta 145  Q
    ||||    
T  37216848 ctta 37216845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||| ||| ||| |||||||||||||||||||||||| |||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  142 c 142  Q
    |    
T  3089689 c 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 3456234 - 3456342
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||| |||||| ||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T
Q  142 cttaaatta 150  Q
    |||||||||    
T  3456334 cttaaatta 3456342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T
Q  142 c 142  Q
    |    
T  3574321 c 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 22426240 - 22426138
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||| ||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T
Q  142 ctt 144  Q
    |||    
T  22426140 ctt 22426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 33113964 - 33114066
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||| ||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  142 ctt 144  Q
    |||    
T  33114064 ctt 33114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 30385570 - 30385675
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| ||||||||||||||||||||| || |||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T
Q  142 cttaaa 147  Q
    | ||||    
T  30385670 cataaa 30385675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| ||||||||||||| |||||||||| |||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 37522223 - 37522323
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattatt-----gtgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||||||||||||      ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T
Q  142 c 142  Q
    |    
T  37522323 c 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||| |||||||||||||||     ||||||||||  || ||| ||||||||| |||||||||||||| |||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  142 c 142  Q
    |    
T  2754989 c 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 36864920 - 36864825
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatatttttt-ataaaatcattcttgatatctaacattttcctt 144  Q
    |||||||||||||||||||||||| |||||||||||||     ||||||||| || |||||| |||||||||||||||||||||| ||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcctt 36864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| ||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattt-tttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| |||||||||||||||||||||||| | |||||||||     ||||||||||| || ||| || |||||||||||||||||||||||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  141 cc 142  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 8361924 - 8361830
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttccttaa 146  Q
    |||||||||||||||||||||| |||||||||||||||||     ||||| |||||| ||   ||||||||||||||||||| ||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttccttaa 8361830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattt-tttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| |||||||||||||||||||||||| |||||||||||     ||| ||||||| || ||| || ||||||||||| |||||||||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  141 cc 142  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtgattattgt-----gtcattcttggatatttttt-ataaaatcattcttgatatctaacattttc 141  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |     |||||||||| || |||||| ||||||||||||||||||||||||||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  142 c 142  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 40328011 - 40328105
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatatttttt-ataaaatcattcttgatatctaacattttcctta 145  Q
    ||||||| |||||||||||||| |||||||||||||||||     ||||| || ||| || |||||||||||||||||||||| |||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcctta 40328105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatatttttt-ataaaatcattcttgatatctaacatttt 140  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| ||     ||||| ||| || |||||| |||||||||||||||||||||||||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  141 c 141  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 42298032 - 42298122
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcattcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||     |  ||| || ||||||||||||||||||| || ||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcat-----gtcattcttgataaaatcattcttgatatttagcattttcc 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatatttttt-ataaaatcattcttgatat 130  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||     ||||| || ||| || |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcct 143  Q
    ||||||||||| |||||| ||| |||||||||||||     ||||||||| |||||| ||   ||||||||||||||||||| |||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattt-tttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||     ||||||||||  |||||| || |||||||||||||| ||||||| ||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    ||||||||||||||||||||||  ||||||||||||     ||||||||| || ||| ||   ||||||||||||||||||| ||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 25189649 - 25189726
Alignment:
Q  190 gaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||| |||||| |||||||||||||   | ||||||||||| |||||||| |||||||  ||||||||||||||||||||    
T  25189649 gaccaaaactgttgaattttaaaatagggg-gaccaattctgcaaaatggtaaaaatag--ggggaccaaaactgcaatta 25189726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 38018316 - 38018268
Alignment:
Q  199 tgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatag 248  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  38018316 tgtcgaattttaaaata-atgggatcaattctgtaaaatggtgaaaatag 38018268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 38018459 - 38018536
Alignment:
Q  190 gaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||| || |||| |||||||||||| | |||||||||||| |||||||  ||||||||  ||||||||||||||||||||    
T  38018459 gaccaaaattgtcaaattttaaaataga-gagaccaattctataaaatgaagaaaatag--ggggaccaaaactgcaatta 38018536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 38216334 - 38216411
Alignment:
Q  190 gaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||| || |||||||||||||||||   | |||||||| || ||||||||||||||||  ||||||||||||||||||||    
T  38216334 gaccaaaagtgtcgaattttaaaatagggg-gaccaattatgcaaaatggtgaaaatag--ggggaccaaaactgcaatta 38216411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 39450691 - 39450620
Alignment:
Q  196 aactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||||| ||||||||||||   | ||||||||||| ||||||||||||||  |||||||| |||||||||||||    
T  39450691 aactgtcaaattttaaaatagggg-gaccaattctgcaaaatggtgaaaat--agggggacaaaaactgcaatta 39450620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtga 84  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 15187730 - 15187831
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  142 ct 143  Q
    ||    
T  15187830 ct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 1645859 - 1645757
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||| | ||| |||||||||||||||||||||||| |||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  142 ctt 144  Q
    |||    
T  1645759 ctt 1645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 17841745 - 17841640
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T
Q  142 cttaaa 147  Q
    | ||||    
T  17841645 cataaa 17841640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 26042008 - 26041907
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T
Q  142 ct 143  Q
    ||    
T  26041908 ct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 40780024 - 40779923
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T
Q  142 ct 143  Q
    ||    
T  40779924 ct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T
Q  142 c 142  Q
    |    
T  6108028 c 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 25581134 - 25581034
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T
Q  142 c 142  Q
    |    
T  25581034 c 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg----tgtcattcttggatattttttataaaatcattcttgatat 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||  ||||||||||||||||||||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgcatgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 32064916 - 32065017
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||     ||||  || ||| |||||||||||||||||||||||| |||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  142 ct 143  Q
    ||    
T  32065016 ct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 37985951 - 37985850
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||| |||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  37985951 atgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37985852  T
Q  142 ct 143  Q
    ||    
T  37985851 ct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 3596936 - 3596836
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T
Q  142 c 142  Q
    |    
T  3596836 c 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||| ||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  142 c 142  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 42754937 - 42754837
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  142 c 142  Q
    |    
T  42754837 c 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  53 gattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttcct 143  Q
    ||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| |||||||||||||||||||||||| |||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| ||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    ||||||| |||||||||||||||||||||||| |||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| ||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatc 131  Q
    |||||||||||||||| || ||||||||||||||||||||||||||     |||||||||||| ||| ||||||||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggt-gattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    |||||||||||||||||||||||||||||||||||  |||||||     ||||||||||| || ||| |||||||||||||||||||||||| ||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 30055686 - 30055786
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||     ||||||||||| || ||| |||||||||||||||| ||||||| |||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  142 c 142  Q
    |    
T  30055786 c 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 8454003 - 8454048
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 8454048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatat 130  Q
    ||||||||||||||||||||| | |||| |||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 31347659 - 31347569
Alignment:
Q  59 taaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcctt 144  Q
    ||||||||||||||||||||||||||||||||||     ||||||||| || ||| ||   ||||||||||||||||||| ||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctt 31347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattt-tttataaaatcattcttgatatctaacatttt 140  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||     |||||| || || ||| || |||||||||||||||||||||| ||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 41819655 - 41819614
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcat 41819614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 27835345 - 27835256
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-tcttggatattttttataaaatcattcttgatatctaacattttcctt 144  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||| ||      |||||| ||||||| ||| |||||||||||||||||||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatc------atttttgataaaattatttttgatatctaacattttcctt 27835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 3207724 - 3207640
Alignment:
Q  162 atattttagacaaaatatgtgttaggaagaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaata 247  Q
    |||||||||||||||||| || |||   ||| | || ||||||||||||||||| | |||||||||| ||||||||| ||||||||    
T  3207724 atattttagacaaaatatttgatagagggactaaaattgtcgaattttaaaataga-gagaccaattttgtaaaatgatgaaaata 3207640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 7022159 - 7022251
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcctt 144  Q
    |||||||||||||||||||||| || ||||||||||     ||||||||| || ||| ||   |||||||| |||||||||| ||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcctt 7022251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 24844685 - 24844649
Alignment:
Q  112 ataaaatcattcttgatatctaacattttccttaaat 148  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  24844685 ataaaatcattattgatatctaacattttccataaat 24844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 8e-31; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 18365469 - 18365369
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  142 c 142  Q
    |    
T  18365369 c 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 18370733 - 18370633
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  142 c 142  Q
    |    
T  18370633 c 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T
Q  142 c 142  Q
    |    
T  17175816 c 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 33695221 - 33695121
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||  |||||| |||||||||||||||||||||||| |||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  142 c 142  Q
    |    
T  33695121 c 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 33696867 - 33696971
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  142 cttaa 146  Q
    |||||    
T  33696967 cttaa 33696971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 32702375 - 32702477
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T
Q  142 ctt 144  Q
    |||    
T  32702475 ctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 23290976 - 23290873
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||     ||||||||| || ||| ||||||||||||| |||||||||| |||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  142 ctta 145  Q
    ||||    
T  23290876 ctta 23290873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 28675318 - 28675420
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||| |||||||||||||||||||||||| |||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  142 ctt 144  Q
    |||    
T  28675418 ctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 6031632 - 6031546
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatc 131  Q
    |||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||||||||||||||||||||||||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 17705363 - 17705262
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||     ||||| || ||| |||||||||||||||||||||||| |||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T
Q  142 ctt 144  Q
    |||    
T  17705264 ctt 17705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 2309318 - 2309208
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||| |||||||||||||||||||||||| |||||||||||     ||||||||||| || ||| ||||||||||||  |||||||||| |||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  142 cttaaattaat 152  Q
    | ||| |||||    
T  2309218 cataatttaat 2309208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 18889539 - 18889494
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 18889494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 6127447 - 6127492
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 92  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtg 6127492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 11548474 - 11548379
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttccttaaa 147  Q
    |||||||||||||||||||||| |||||||||||     ||||||||||| ||  || ||   ||||||||||||||||||| |||||| ||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttttcttaaa 11548379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 29693615 - 29693722
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatatttttt-ataaaatcattcttgatatctaacatttt 140  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||     ||||||||  || ||| || |||||||||||||||||||||| ||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  141 ccttaaat 148  Q
    ||||||||    
T  29693715 ccttaaat 29693722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 2121040 - 2121004
Alignment:
Q  106 ttttttataaaatcattcttgatatctaacattttcc 142  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2121040 ttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Complemental strand, 582552 - 582522
Alignment:
Q  112 ataaaatcattcttgatatctaacattttcc 142  Q
    |||||||||||||||||||||||||||||||    
T  582552 ataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 34238933 - 34238883
Alignment:
Q  91 tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||| || || || |||||||||||||||||||||| |||||||    
T  34238933 tgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaa 79  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 44094867 - 44094971
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||| ||||||||| |||||||||||||| |||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T
Q  142 cttaa 146  Q
    |||||    
T  44094967 cttaa 44094971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 41876337 - 41876235
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T
Q  142 ctt 144  Q
    |||    
T  41876237 ctt 41876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 51737675 - 51737777
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T
Q  142 ctt 144  Q
    |||    
T  51737775 ctt 51737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||| |||||||||||||||||     |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  142 c 142  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||| ||||||||||||||||||||     |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T
Q  142 c 142  Q
    |    
T  25463946 c 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 37821729 - 37821629
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T
Q  142 c 142  Q
    |    
T  37821629 c 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 19015574 - 19015685
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| ||||||||||||||||||||| || |||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T
Q  142 cttaaattaatg 153  Q
    || | |||||||    
T  19015674 ctaatattaatg 19015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 20305025 - 20304923
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||| |||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  142 ctt 144  Q
    |||    
T  20304925 ctt 20304923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 36966603 - 36966501
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||| ||||||| || ||| |||||||||||||||||||||||| |||||||    
T  36966603 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttc 36966504  T
Q  142 ctt 144  Q
    |||    
T  36966503 ctt 36966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 9910186 - 9910086
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||| || |||||||||||||||||||||||||     ||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  142 c 142  Q
    |    
T  9910086 c 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 25973577 - 25973677
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||| |||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  142 c 142  Q
    |    
T  25973677 c 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 18404618 - 18404721
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||| ||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  142 ctta 145  Q
    ||||    
T  18404718 ctta 18404721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||| |||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattatt-----gtgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||||||| ||||      ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T
Q  142 c 142  Q
    |    
T  6883757 c 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 10167569 - 10167679
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtc-----attcttggata-ttttttataaaatcattcttgatatctaacatttt 140  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||     ||||||  ||| |||||||||||||||||||| |||| |||||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  141 ccttaaattaa 151  Q
    |||| ||||||    
T  10167669 cctttaattaa 10167679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  71 aaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    ||||||||||||||||||||||||||     ||||| || ||| |||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 33786516 - 33786424
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcctt 144  Q
    |||||||||||||||||||||| |||||||||||||     ||||||||| || ||| ||   ||||||||||||||||||| ||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctt 33786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    |||||||||||||||||||||| |||||||||||     ||||||||||| |||||| ||   ||||||||||||||||||| ||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    |||||||||||||||||||||| |||||||||||||     ||||||||| || ||| ||   ||||||||||||||||||| ||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 42508332 - 42508255
Alignment:
Q  190 gaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||| ||||||||||||||||||||   | ||||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  42508332 gaccaaaactgtcgaattttaaaatagggg-gaccatttctgtaaaatggtgaaaat--aggaggaccaaaactgcaatta 42508255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 27523080 - 27523047
Alignment:
Q  112 ataaaatcattcttgatatctaacattttcctta 145  Q
    ||||||||||||||||||| ||||||||||||||    
T  27523080 ataaaatcattcttgatatataacattttcctta 27523047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 13355018 - 13355129
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||     |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  142 cttaaattaatg 153  Q
    ||| ||| ||||    
T  13355118 ctttaataaatg 13355129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 10662058 - 10662158
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  142 c 142  Q
    |    
T  10662158 c 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 33380377 - 33380477
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T
Q  142 c 142  Q
    |    
T  33380477 c 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 35160929 - 35161029
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  142 c 142  Q
    |    
T  35161029 c 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 23267957 - 23267846
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  23267957 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 23267858  T
Q  142 cttaaattaatg 153  Q
    | |||| |||||    
T  23267857 cctaaaataatg 23267846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacatt 138  Q
    |||||||||||||||||||||||||||||||||||| |||||||     |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 7475403 - 7475303
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T
Q  142 c 142  Q
    |    
T  7475303 c 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 9293470 - 9293370
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||| |||||||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  142 c 142  Q
    |    
T  9293370 c 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattt 139  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||     ||||||||| || ||| |||||||||||||||||||||||| |||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgt-----gtcattcttggatattttttataaaatcattcttgatatctaacattttcct 143  Q
    |||||||||||||||||||||||||||||||||||     |||||||||| || ||| ||   ||||||||||||||||||| |||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 21936252 - 21936297
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 92  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtg 21936297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattatt-----gtgtcattcttggatattt-tttataaaatcattcttgatatctaacattttcc 142  Q
    ||||||| |||||||||||||||||||||||||      ||||||||||  |||||| || || ||||||||||||||||||||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 22592880 - 22592985
Alignment:
Q  47 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgtcat-----tcttggatatttttt-ataaaatcattcttgatatctaacatt 138  Q
    ||||||| ||||||||| |||||||||  ||||| |||||||||||||||||     ||||| || ||| || |||||||||||||||||||||| ||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  139 ttcctt 144  Q
    ||||||    
T  22592980 ttcctt 22592985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 16767357 - 16767308
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcat 16767308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 34321042 - 34320959
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcattcttggatattttttataaaatcattcttgatatctaacattttccttaa 146  Q
    |||||||||||||||||||||| ||||||||||||| |||     |  ||| || | |||||||||||||||||||| ||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccat-----gtcattcttga-aaaatcattcttgatatctagcattttccttaa 34320959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  97 tcttggatattttttataaaatcattcttgatatctaacattttcc 142  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacatttt 140  Q
    |||||||||||||||||| ||| |||||||||||||||||     ||||| || || || ||||| |||||||||||||||| ||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaattttcttgataaa-tcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 96
Target Start/End: Original strand, 37335824 - 37335863
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcat 37335863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 40609939 - 40609986
Alignment:
Q  221 gaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaatta 270  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  40609939 gaccaattctgtaaaattgtgaaaat--aggaggaccaaaactgcaatta 40609986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 14941259 - 14941210
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat 96  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcat 14941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 26106 - 26208
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T
Q  142 ctt 144  Q
    |||    
T  26206 ctt 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 16154 - 16256
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||| |||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T
Q  142 ctt 144  Q
    |||    
T  16254 ctt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 8572 - 8605
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaag 80  Q
    ||||||||||||||||||||||||||||||||||    
T  8572 atgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 11791 - 11891
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  142 c 142  Q
    |    
T  11891 c 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 41180 - 41280
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||     | |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T
Q  142 c 142  Q
    |    
T  41280 c 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 4566 - 4666
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-----tcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||     ||||||||  || ||| |||||||||||||||||||||||| |||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T
Q  142 c 142  Q
    |    
T  4666 c 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 48019 - 48119
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattg-----tgtcattcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||| |||||||||     ||||||||||| || ||| |||||||||||||||||||||||| |||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T
Q  142 c 142  Q
    |    
T  48119 c 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 13012 - 13123
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcat-----tcttggatattttttataaaatcattcttgatatctaacattttc 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||     ||||  || ||| |||||||||||||||||||||||| ||||||     
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttt 13111  T
Q  142 cttaaattaatg 153  Q
    ||||||| ||||    
T  13112 cttaaataaatg 13123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 21385 - 21459
Alignment:
Q  190 gaccagaactgtcgaattttaaaatacatgagaccaattctgtaaaatggtgaaaatagagggggaccaaaactgcaa 267  Q
    ||||| ||||||||||||||||||||   | ||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  21385 gaccaaaactgtcgaattttaaaatagggg-gaccaattctgcaaaatggtgaaaat--agggggatcaaaactgcaa 21459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University