View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_high_24 (Length: 406)
Name: NF14151_high_24
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 391
Target Start/End: Complemental strand, 31617360 - 31616986
Alignment:
| Q |
16 |
aatatagacaatacaaggttccaaattttccatggtcaaagaaaacaaaaaccactcatattttacaaccttctaagaaataacgccacccaatagaaac |
115 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31617360 |
aatatatacaatacaaggttccaaattttccatggtcaaagaaaacaaaaaccactgatattttacaaccttctaagaaataacgccacccaatagaaac |
31617261 |
T |
|
| Q |
116 |
acaaaccttaaacattacgtacacatacatgaacataactcannnnnnnctctctttatattaaccctttccatttctcaacatcaaaattttccnnnnn |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31617260 |
acaaaccttaaacattacgtacacatacatgaacataactcatttttttctctctttatattaaccctttccatttctcaacatcaaaattttcc-aaaa |
31617162 |
T |
|
| Q |
216 |
nnnnnnnnnnnnnnnncttcaccacccttttctcttctctttcttatggcatcttcatcaacaagtagttttgaannnnnnnnnnnnnnnnnnnttaatc |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |
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| T |
31617161 |
ccaaaaacaaaaaaaacttcaccacccttttctcttctctttcttatggcatcttcatcaacaagtagttttgaaaataataataataataataatcatc |
31617062 |
T |
|
| Q |
316 |
aaaactctttgaatggtttcaacaatttcactttctcaacacaccctttcatgtccactactttctctgacctttt |
391 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31617061 |
aaaactctttgaatggtttcaacaatttcactttctcaacacaccctttcatgtccactactttctctgacctttt |
31616986 |
T |
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