View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_high_51 (Length: 207)
Name: NF14151_high_51
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_high_51 |
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Alignment Details
Target: chr5 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 5329662 - 5329472
Alignment:
| Q |
1 |
atcagaaaccaatactcaatcaatctcannnnnnncaattctatatgccaccacaaaattagtgttaattatcttgttttaatagatcaaattcattcca |
100 |
Q |
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| T |
5329662 |
atcagaaaccaatactcaatcaatctcatttttt-caattctatatgcctccacaaaattagtgttaattatcttgtcttaatagatcaaattaattcca |
5329564 |
T |
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| Q |
101 |
ttaacatattatagtgcattttatgtattaatttattgaagatttataaaatgtaccactcttttgcaattataactaatataacataattt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5329563 |
ttaacatattatagtgcattttatgtattaatttattgaagatttataaaatgtaccactcttttgcaattataactaatataacataattt |
5329472 |
T |
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