View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_high_52 (Length: 203)
Name: NF14151_high_52
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_high_52 |
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Alignment Details
Target: chr4 (Bit Score: 135; Significance: 1e-70; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 28238986 - 28239168
Alignment:
| Q |
1 |
cagaataatgatgaaatcaaaggagtatgttgatttctcacttgccttttgtgcatgactgcatgttaatcactgcattgtgaaacatctcaacatgtat |
100 |
Q |
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| T |
28238986 |
cagaataatgatgaaatcaaaggagtatgttgatttctcacttgccttgtgtgcatgactgcatgttaatcattgcattgtgaaacatctcaacatgtat |
28239085 |
T |
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| Q |
101 |
ttcttttaagtatattggnnnnnnnnacgaaggagtctcgcaagaaatgctagaataatatgcagtagaaagacgattataag |
183 |
Q |
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| T |
28239086 |
ttcatttgagtatattggttttttttacgaaggagtctcgcaagaaatgctagaaaaatatgcagtagaaagacaattataag |
28239168 |
T |
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