View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_low_10 (Length: 510)
Name: NF14151_low_10
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 452; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 19 - 506
Target Start/End: Original strand, 45328247 - 45328735
Alignment:
| Q |
19 |
aaacccttctctagcacccatttgaagccctgttaaaatcgtattctcttgcaaatccaaaacaaaattaacaagtccacttaagagtatatctatgaat |
118 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328247 |
aaacccttctctagcacccatttgaagcccggttaaaatcgtattctcttgcaaatccaaaacaaaattaacaagtccacttaagagtatatctatgaat |
45328346 |
T |
|
| Q |
119 |
ccaaaacccactaaaacaaaaacacaagcaaagagtttagtcattggtgttaaaggagctatgtctccataaccaattgtacacatggtgactatacaaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328347 |
ccaaaacccactaaaacaaaaacacaagcaaagagtttagtcattggtgttaaaggagctatgtctccataaccaattgtacacatggtgactatacaaa |
45328446 |
T |
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| Q |
219 |
aataaagagcatcaacaacagggtgagtttcaatgccagagaaattttttgtgttgaaagagtatattatgacaccgacagagaggtatataaggagaag |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328447 |
aataaagagcatcaacaacagggtgagtttcaatgccagagaaattttttgtgttgaaagagtatattatgacaccgacagagaggtatataaggagaag |
45328546 |
T |
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| Q |
319 |
ccaaatgccttgtcgaatgatggaattggtttgaggtttgggaagttgaggttggtcattgatgggtttaaggtgtgggagaatgaacatagctggtgct |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328547 |
ccaaatgccttgtcgaatgatggaattggtttgaggtttgggaagttgaggttggtcattgatgggtttaaggtgtgggagaatgaacatagctggtgct |
45328646 |
T |
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| Q |
419 |
gttttgcagcggctgag-nnnnnnngtttgtgatgagaaaataattgttgttgtggagtgaagttgatggattgtatctcagatgattg |
506 |
Q |
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||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328647 |
gttttgcagcggctgagttttttttgtttgtgatgagaaaatgattgttgttgtggagtgaagttgatggattgtatctcagatgattg |
45328735 |
T |
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