View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_low_14 (Length: 462)
Name: NF14151_low_14
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 19 - 450
Target Start/End: Original strand, 5684388 - 5684819
Alignment:
| Q |
19 |
acaacaatggaactctcatcctctttttcactctccccaaaaccaactaacttctcattctcatcctcattctctcctttccccatccaaatcctaatca |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5684388 |
acaacaatggaactctcatcctctttttcactctccccaaaaccaactaacttctcattctcatcctcattctctcctttccccatccaaatcctaatca |
5684487 |
T |
|
| Q |
119 |
aaaacaccaaatcccgaaactaccctcttcacgttctcgcagttgcaatagacccaacaaaagacttccctagaaataacaatcctcaacgacttctaaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5684488 |
aaaacaccaaatcccgaaactaccctcttcacgttctcgcagttgcaatagacccaacaaaagacttccctagaaataacaatcctcaacgacttctaaa |
5684587 |
T |
|
| Q |
219 |
agaactagcagaacgcnnnnnnntcactaacccaaaatcaaaatcaccaccaagacgttacattttaaaacccccactagacgataaaaaactcgcagaa |
318 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5684588 |
agaactagcagaacgcaaaaaaatcactaacccaaaatcaaaatcaccaccaagacgttacattttaaaacccccactagacgataaaaaactcgcagaa |
5684687 |
T |
|
| Q |
319 |
agatttctcaacagtccacaactttcactaaaatcattcccattgttaagttcttgtctaccttcatcgcgccttaacaatgccgataaattatggatcg |
418 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
5684688 |
agatttctcaacagtccacaactttcactaaaatcattcccattgttaagttcttgtctaccttcattgcgccttaacaatgccgataaattatggatcg |
5684787 |
T |
|
| Q |
419 |
atgagtatttactcgaagcgaaacaagccctt |
450 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
5684788 |
atgagtatttactcgaagcgaaacaagccctt |
5684819 |
T |
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