View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_low_26 (Length: 389)
Name: NF14151_low_26
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 16 - 373
Target Start/End: Original strand, 39616335 - 39616695
Alignment:
| Q |
16 |
atcagctacaaaatttgattacaatattcaacaacatcatacatatatacacaagttattcagggactctacaaaattccgaaagaaaacaaaacataga |
115 |
Q |
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| T |
39616335 |
atcagctacaaaatttgattacaatattcaacaacatcatacatatatacacaagttattcagggactctacaaaattccgaaagaaaacaaaacagaga |
39616434 |
T |
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| Q |
116 |
tgagccgtagaagaacctaagtgg-atataaagctcaca--agcttgacaactttaagcttctgggctatatatccacttctaattgtggagctatatac |
212 |
Q |
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||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
39616435 |
agagccgtagaagaacctaagtgggatataaagctcacacaagcttaacagctttaagcttctgggctatatatcaacttctaattgtggagctatatac |
39616534 |
T |
|
| Q |
213 |
ctttcccacgacccgaacacgaaaacgccgccgcaataattttgattatccttaacttgacttgccctctccttggtgggaacatttgagtggatttact |
312 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
39616535 |
ctttcccacgacccgaacatgaaaacgccgccgcaataattttgattatccttaacttgatttgccctctccttggtgggaacatttgagtggatttact |
39616634 |
T |
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| Q |
313 |
cctctgtttggcttcttcaaactctgctcctaaagccgaagaacaaattggggtgtgaaat |
373 |
Q |
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||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
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| T |
39616635 |
actctgtttggcttcttcaaactctgctgctaaagctgaagaacaaattggggtgtgaaat |
39616695 |
T |
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