View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_low_29 (Length: 354)
Name: NF14151_low_29
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 5685396 - 5685072
Alignment:
| Q |
13 |
aatatagctaactcggtaaagtgatatcgtttattaaaatatctcaacaaatacctacatagtaaaatttgattgaacggcggtgtaagtgcatagttat |
112 |
Q |
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| T |
5685396 |
aatatagctaactcggtaaagtgatatcgtttattaaaatatctcaacaaatacctacatagtaaaatttgattgaacggcggtgtaagtgcatagttat |
5685297 |
T |
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| Q |
113 |
caaaatctattgtaatttgtaagtacatgaaattttacattacatacaataagaacttataccaacataatatcaaaattataacctacgcgaacattga |
212 |
Q |
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| T |
5685296 |
caaaatctattgtaatttgtaagtacatgaaattttacattacatgcaataagaacttacaccaacataatatcaaaattataacctacgcgaacattga |
5685197 |
T |
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| Q |
213 |
agtaaaattataacttacttgacaggtccttctctatccctcctcacaatcttatccatattatcataaggaaatatcaaattctgtaaactggcagctt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5685196 |
agtaaaattataacttacttgacaggtccttctctatccctcctcacaatcttatccatattatcataaggaaatatcaaattctgtaaactggcagctt |
5685097 |
T |
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| Q |
313 |
taatccatttaggcaaattctcctt |
337 |
Q |
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||||||||||||||||||||||||| |
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| T |
5685096 |
taatccatttaggcaaattctcctt |
5685072 |
T |
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