View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_low_30 (Length: 338)
Name: NF14151_low_30
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 36866728 - 36866404
Alignment:
| Q |
1 |
cttttgttttttgttacaaattcttttaaaagctttatgtattggaaaaactcaatcaagtttatttaacatgtctaacatacatacatattttatatgc |
100 |
Q |
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| T |
36866728 |
cttttgttttttgttacaaattcttttaaaagctttatgtattggaaaaactcaatcaagtttattcaacatgtctaacatacatacatattttatatgc |
36866629 |
T |
|
| Q |
101 |
aggttattagagcaatgaacatttgtcaaagggagattataggaatggaagaagaaaataaaagcatgatggaaacaagaattcaagcattgtctcaaag |
200 |
Q |
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| T |
36866628 |
aggttattagagcaatgaacatttgtcaaagggagattataggaatggaagaagaaaataaaagcatgatggaaacaagaattcaagcattgtctcaaag |
36866529 |
T |
|
| Q |
201 |
tctaaaccagaacatgtctttggaatcaaatttaaacgaatacaacagctttcgaggtgttctttatgcgatgagaagagttagttcattactactaatg |
300 |
Q |
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| T |
36866528 |
tctaaaccagaacatgtctttggaatcaaatttaaacgaatacaacagctttcgaggtgttctttacgcgatgagaagagttagttcattactactaatg |
36866429 |
T |
|
| Q |
301 |
attttgttaagtggtgttgcatatt |
325 |
Q |
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||||||||||||||||||||||||| |
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| T |
36866428 |
attttgttaagtggtgttgcatatt |
36866404 |
T |
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