View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14151_low_44 (Length: 245)

Name: NF14151_low_44
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14151_low_44
NF14151_low_44
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-230)||(263247-263458)
[»] chr2 (54 HSPs)
chr2 (14-175)||(36756276-36756437)
chr2 (23-107)||(15972848-15972932)
chr2 (27-175)||(30717462-30717610)
chr2 (63-175)||(35056883-35056995)
chr2 (36-175)||(37419731-37419870)
chr2 (37-110)||(12668420-12668493)
chr2 (36-93)||(21782832-21782889)
chr2 (21-109)||(20539672-20539760)
chr2 (26-94)||(21616740-21616808)
chr2 (37-132)||(4882671-4882766)
chr2 (26-92)||(12940950-12941016)
chr2 (17-107)||(18421932-18422022)
chr2 (26-175)||(18840956-18841094)
chr2 (26-107)||(19536397-19536479)
chr2 (26-175)||(15657842-15657991)
chr2 (28-101)||(21374705-21374778)
chr2 (55-123)||(24975309-24975377)
chr2 (36-110)||(15909629-15909703)
chr2 (23-93)||(16069268-16069338)
chr2 (37-175)||(18420366-18420504)
chr2 (28-94)||(23718006-23718072)
chr2 (28-94)||(24105678-24105744)
chr2 (40-106)||(42832277-42832343)
chr2 (56-117)||(13273008-13273069)
chr2 (26-107)||(20242727-20242808)
chr2 (28-101)||(39323244-39323317)
chr2 (24-92)||(6940231-6940299)
chr2 (28-92)||(30404865-30404929)
chr2 (26-110)||(34784979-34785063)
chr2 (55-175)||(44860327-44860447)
chr2 (40-175)||(11223796-11223930)
chr2 (28-106)||(14996224-14996303)
chr2 (31-106)||(21091706-21091781)
chr2 (56-95)||(23921261-23921300)
chr2 (55-110)||(31456638-31456693)
chr2 (28-107)||(37558957-37559036)
chr2 (113-175)||(2438662-2438724)
chr2 (27-92)||(20473301-20473366)
chr2 (26-107)||(21624244-21624326)
chr2 (26-95)||(29663987-29664057)
chr2 (26-92)||(30335395-30335461)
chr2 (36-94)||(30527608-30527666)
chr2 (37-71)||(31727846-31727880)
chr2 (37-106)||(17776576-17776645)
chr2 (26-110)||(23058439-23058524)
chr2 (31-88)||(27084245-27084302)
chr2 (22-107)||(31018564-31018649)
chr2 (36-93)||(31284036-31284093)
chr2 (36-105)||(31808065-31808134)
chr2 (143-175)||(18255947-18255979)
chr2 (56-123)||(25544489-25544556)
chr2 (55-107)||(34691805-34691857)
chr2 (55-107)||(34714217-34714269)
chr2 (38-94)||(37411257-37411313)
[»] chr4 (44 HSPs)
chr4 (30-173)||(30838192-30838335)
chr4 (22-175)||(30982810-30982960)
chr4 (40-175)||(24613633-24613768)
chr4 (26-175)||(36635302-36635446)
chr4 (21-124)||(40742564-40742667)
chr4 (26-175)||(847929-848078)
chr4 (26-155)||(27706129-27706258)
chr4 (28-109)||(30298926-30299008)
chr4 (28-109)||(30327794-30327876)
chr4 (22-107)||(12797338-12797422)
chr4 (40-175)||(3947704-3947833)
chr4 (26-94)||(24343485-24343553)
chr4 (55-94)||(37698719-37698758)
chr4 (31-125)||(4383351-4383444)
chr4 (113-175)||(16073448-16073510)
chr4 (40-110)||(35952614-35952684)
chr4 (26-175)||(5414104-5414253)
chr4 (22-107)||(12895274-12895359)
chr4 (26-175)||(19482646-19482795)
chr4 (31-175)||(22234822-22234967)
chr4 (26-107)||(23292986-23293067)
chr4 (29-106)||(35157986-35158063)
chr4 (36-108)||(35723383-35723456)
chr4 (48-93)||(56257933-56257978)
chr4 (21-101)||(14126117-14126197)
chr4 (55-175)||(47263993-47264113)
chr4 (43-107)||(54580023-54580087)
chr4 (36-107)||(21945491-21945562)
chr4 (40-107)||(38847012-38847079)
chr4 (28-107)||(40179636-40179715)
chr4 (39-94)||(40613441-40613496)
chr4 (36-106)||(9299056-9299125)
chr4 (36-94)||(15029753-15029811)
chr4 (36-90)||(20743295-20743349)
chr4 (36-94)||(21539880-21539938)
chr4 (26-92)||(40481615-40481680)
chr4 (26-107)||(49431003-49431085)
chr4 (46-95)||(8423730-8423779)
chr4 (21-110)||(16303263-16303352)
chr4 (138-175)||(20633550-20633587)
chr4 (39-107)||(2361975-2362043)
chr4 (56-116)||(6285045-6285105)
chr4 (36-72)||(17345450-17345486)
chr4 (22-94)||(26504312-26504384)
[»] chr3 (49 HSPs)
chr3 (40-171)||(28812507-28812638)
chr3 (26-175)||(14216870-14217019)
chr3 (26-175)||(14222999-14223148)
chr3 (21-107)||(8383230-8383316)
chr3 (39-156)||(8039786-8039903)
chr3 (40-175)||(14209105-14209240)
chr3 (26-155)||(9800018-9800147)
chr3 (36-175)||(4987223-4987362)
chr3 (22-175)||(55401049-55401191)
chr3 (26-124)||(4990950-4991048)
chr3 (36-122)||(17005604-17005690)
chr3 (26-175)||(15796226-15796375)
chr3 (21-117)||(10455763-10455859)
chr3 (40-94)||(12703999-12704053)
chr3 (26-96)||(24205052-24205122)
chr3 (26-175)||(41961582-41961731)
chr3 (26-90)||(14618759-14618823)
chr3 (40-108)||(34910309-34910377)
chr3 (36-107)||(10954940-10955011)
chr3 (27-94)||(11493374-11493441)
chr3 (26-109)||(28917979-28918062)
chr3 (31-94)||(29112293-29112356)
chr3 (113-175)||(8842383-8842445)
chr3 (54-104)||(12083909-12083959)
chr3 (28-110)||(25948884-25948966)
chr3 (26-92)||(26492220-26492286)
chr3 (39-175)||(29508435-29508566)
chr3 (25-106)||(10268487-10268568)
chr3 (26-107)||(16000016-16000097)
chr3 (36-105)||(20503453-20503522)
chr3 (26-66)||(10335327-10335367)
chr3 (46-110)||(11313797-11313861)
chr3 (56-132)||(16789020-16789096)
chr3 (26-94)||(25652044-25652112)
chr3 (36-108)||(26290359-26290431)
chr3 (26-94)||(32804553-32804621)
chr3 (26-89)||(2620071-2620134)
chr3 (28-107)||(8587021-8587100)
chr3 (55-174)||(11665951-11666070)
chr3 (36-110)||(14747549-14747624)
chr3 (21-96)||(14840302-14840377)
chr3 (26-88)||(14223872-14223934)
chr3 (40-154)||(14832091-14832205)
chr3 (26-71)||(12674537-12674582)
chr3 (56-125)||(16192732-16192801)
chr3 (26-107)||(25093480-25093561)
chr3 (28-72)||(3865591-3865635)
chr3 (36-92)||(21479106-21479162)
chr3 (55-107)||(49505154-49505206)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-175)||(241572-241721)
[»] chr8 (47 HSPs)
chr8 (31-175)||(15816061-15816205)
chr8 (26-175)||(22651954-22652103)
chr8 (17-175)||(4673357-4673515)
chr8 (26-175)||(29510236-29510385)
chr8 (40-175)||(29447042-29447177)
chr8 (43-175)||(11927018-11927150)
chr8 (22-110)||(24362199-24362287)
chr8 (36-175)||(44067504-44067643)
chr8 (43-94)||(7658458-7658509)
chr8 (41-175)||(11944658-11944792)
chr8 (26-107)||(926788-926869)
chr8 (56-175)||(13009425-13009544)
chr8 (28-92)||(36450769-36450833)
chr8 (21-140)||(2572023-2572142)
chr8 (36-107)||(4786338-4786409)
chr8 (16-175)||(8343284-8343443)
chr8 (40-107)||(13844596-13844663)
chr8 (76-162)||(28384938-28385025)
chr8 (56-174)||(4122182-4122300)
chr8 (40-94)||(14134691-14134745)
chr8 (26-92)||(18170497-18170563)
chr8 (26-92)||(18634065-18634131)
chr8 (31-106)||(22204622-22204699)
chr8 (40-94)||(31236590-31236644)
chr8 (36-93)||(9382960-9383017)
chr8 (26-107)||(24669411-24669492)
chr8 (45-125)||(27067282-27067360)
chr8 (55-107)||(3025558-3025610)
chr8 (54-94)||(13203647-13203687)
chr8 (26-94)||(27213525-27213593)
chr8 (47-94)||(12606842-12606889)
chr8 (17-96)||(25192358-25192437)
chr8 (28-107)||(31109518-31109597)
chr8 (113-160)||(31557050-31557097)
chr8 (31-94)||(34897068-34897131)
chr8 (36-106)||(20679396-20679466)
chr8 (26-107)||(24413559-24413641)
chr8 (55-117)||(25566848-25566910)
chr8 (36-110)||(30271288-30271362)
chr8 (40-94)||(39954292-39954346)
chr8 (26-175)||(11803237-11803386)
chr8 (26-107)||(20873047-20873128)
chr8 (23-128)||(25172677-25172782)
chr8 (46-94)||(4611532-4611580)
chr8 (42-94)||(14634154-14634206)
chr8 (36-92)||(22595982-22596038)
chr8 (26-94)||(29776014-29776082)
[»] chr7 (56 HSPs)
chr7 (26-110)||(27945019-27945103)
chr7 (36-175)||(32308108-32308247)
chr7 (26-175)||(24339620-24339769)
chr7 (36-175)||(7438694-7438833)
chr7 (36-175)||(9408266-9408405)
chr7 (26-110)||(18013071-18013155)
chr7 (36-155)||(6630864-6630983)
chr7 (23-110)||(10042912-10042999)
chr7 (17-94)||(5235955-5236032)
chr7 (55-175)||(26033393-26033513)
chr7 (21-96)||(4017805-4017880)
chr7 (36-103)||(22868030-22868097)
chr7 (22-175)||(5409774-5409921)
chr7 (76-154)||(27229264-27229342)
chr7 (10-175)||(43027407-43027566)
chr7 (17-110)||(13770660-13770753)
chr7 (40-117)||(23128651-23128728)
chr7 (26-115)||(49107799-49107887)
chr7 (26-110)||(22602707-22602791)
chr7 (21-125)||(26329364-26329468)
chr7 (28-96)||(43249973-43250041)
chr7 (22-93)||(29787383-29787454)
chr7 (36-94)||(5835235-5835293)
chr7 (26-120)||(19206028-19206122)
chr7 (55-175)||(21880159-21880268)
chr7 (26-92)||(24105656-24105722)
chr7 (41-107)||(28155563-28155629)
chr7 (45-110)||(5548673-5548738)
chr7 (17-106)||(11061077-11061166)
chr7 (26-71)||(28401121-28401166)
chr7 (35-124)||(11272569-11272660)
chr7 (26-154)||(15902800-15902928)
chr7 (26-94)||(21140995-21141063)
chr7 (36-92)||(30813800-30813856)
chr7 (36-108)||(35861952-35862024)
chr7 (43-110)||(7758317-7758384)
chr7 (36-107)||(20549779-20549850)
chr7 (27-94)||(22484004-22484071)
chr7 (26-108)||(2034419-2034501)
chr7 (26-84)||(11722121-11722179)
chr7 (26-92)||(26733282-26733348)
chr7 (36-90)||(30516374-30516428)
chr7 (113-175)||(33994266-33994328)
chr7 (41-110)||(7328688-7328757)
chr7 (39-96)||(11665451-11665508)
chr7 (55-108)||(19992008-19992061)
chr7 (31-92)||(23191879-23191940)
chr7 (39-92)||(25481893-25481946)
chr7 (26-110)||(1433432-1433516)
chr7 (107-175)||(5307304-5307372)
chr7 (143-175)||(8842282-8842314)
chr7 (143-175)||(9778589-9778621)
chr7 (26-94)||(10377485-10377553)
chr7 (40-131)||(11072290-11072379)
chr7 (76-132)||(21560531-21560587)
chr7 (40-108)||(25822647-25822715)
[»] chr5 (46 HSPs)
chr5 (31-175)||(39698524-39698668)
chr5 (26-171)||(21522728-21522873)
chr5 (26-171)||(21533294-21533439)
chr5 (22-175)||(19579675-19579828)
chr5 (26-107)||(6326297-6326378)
chr5 (46-175)||(7677703-7677832)
chr5 (26-171)||(21542008-21542153)
chr5 (26-90)||(15410465-15410529)
chr5 (36-123)||(3966491-3966578)
chr5 (26-107)||(21191056-21191137)
chr5 (26-95)||(22013392-22013461)
chr5 (36-124)||(6035471-6035558)
chr5 (27-175)||(6401477-6401625)
chr5 (39-107)||(32630735-32630803)
chr5 (28-92)||(43001780-43001844)
chr5 (36-107)||(6247610-6247681)
chr5 (21-92)||(41995444-41995515)
chr5 (42-92)||(27932229-27932279)
chr5 (36-96)||(7997177-7997237)
chr5 (28-92)||(14674249-14674313)
chr5 (26-94)||(22423825-22423893)
chr5 (56-96)||(25863212-25863252)
chr5 (39-107)||(28588674-28588742)
chr5 (55-111)||(36838550-36838606)
chr5 (24-71)||(5873549-5873596)
chr5 (36-175)||(11685927-11686065)
chr5 (26-162)||(15382455-15382588)
chr5 (28-107)||(16203795-16203874)
chr5 (56-175)||(30098334-30098453)
chr5 (26-125)||(36642744-36642843)
chr5 (27-89)||(9449448-9449510)
chr5 (40-94)||(14574062-14574116)
chr5 (36-94)||(27144451-27144509)
chr5 (36-110)||(31084311-31084385)
chr5 (37-107)||(33178014-33178084)
chr5 (40-94)||(35017029-35017083)
chr5 (26-175)||(37328778-37328925)
chr5 (40-94)||(39205872-39205926)
chr5 (56-175)||(2419865-2419983)
chr5 (28-93)||(6770523-6770588)
chr5 (86-175)||(19452998-19453087)
chr5 (26-122)||(19552530-19552624)
chr5 (26-71)||(19820430-19820475)
chr5 (26-110)||(13287396-13287480)
chr5 (40-104)||(38464367-38464431)
chr5 (19-87)||(40000555-40000623)
[»] scaffold0004 (1 HSPs)
scaffold0004 (31-175)||(92790-92938)
[»] chr1 (61 HSPs)
chr1 (40-175)||(9828036-9828171)
chr1 (26-162)||(6612116-6612252)
chr1 (26-175)||(47989476-47989624)
chr1 (22-175)||(1486647-1486794)
chr1 (36-92)||(3490405-3490461)
chr1 (43-125)||(25361881-25361963)
chr1 (26-94)||(398778-398846)
chr1 (26-110)||(5376497-5376581)
chr1 (26-110)||(7918208-7918292)
chr1 (36-124)||(10572572-10572660)
chr1 (26-94)||(34298414-34298482)
chr1 (26-173)||(9629834-9629981)
chr1 (28-107)||(46348383-46348462)
chr1 (55-125)||(21038090-21038160)
chr1 (26-92)||(31015021-31015087)
chr1 (36-94)||(36878449-36878507)
chr1 (26-107)||(5927340-5927421)
chr1 (17-175)||(5944250-5944410)
chr1 (36-175)||(6427449-6427591)
chr1 (26-110)||(20157347-20157431)
chr1 (39-107)||(39130767-39130835)
chr1 (36-83)||(609482-609529)
chr1 (29-88)||(2896140-2896199)
chr1 (36-107)||(22881616-22881687)
chr1 (36-107)||(37598820-37598890)
chr1 (55-94)||(49872844-49872883)
chr1 (24-110)||(17754287-17754373)
chr1 (36-94)||(19562634-19562692)
chr1 (40-110)||(24577183-24577253)
chr1 (28-110)||(34712380-34712462)
chr1 (28-94)||(38503300-38503366)
chr1 (26-107)||(41877470-41877551)
chr1 (38-110)||(113289-113361)
chr1 (30-94)||(6427332-6427396)
chr1 (34-94)||(19324548-19324608)
chr1 (40-91)||(12443476-12443527)
chr1 (76-175)||(31694642-31694741)
chr1 (58-125)||(44482240-44482307)
chr1 (36-106)||(5898267-5898337)
chr1 (36-94)||(8842727-8842785)
chr1 (28-94)||(15641043-15641109)
chr1 (36-90)||(17831548-17831602)
chr1 (113-175)||(22515830-22515892)
chr1 (36-106)||(28273089-28273159)
chr1 (27-105)||(30847722-30847800)
chr1 (48-94)||(40181871-40181917)
chr1 (113-175)||(40258876-40258938)
chr1 (29-107)||(42359449-42359527)
chr1 (26-92)||(48450602-48450668)
chr1 (55-96)||(8010298-8010339)
chr1 (21-93)||(9033021-9033094)
chr1 (26-107)||(9709798-9709879)
chr1 (41-94)||(13436451-13436504)
chr1 (26-91)||(23636065-23636130)
chr1 (26-94)||(16927198-16927266)
chr1 (21-105)||(21378551-21378635)
chr1 (113-173)||(26830641-26830701)
chr1 (36-92)||(27471581-27471637)
chr1 (36-92)||(29144373-29144429)
chr1 (14-110)||(37055853-37055949)
chr1 (143-175)||(48415669-48415701)
[»] scaffold0136 (1 HSPs)
scaffold0136 (26-175)||(3781-3930)
[»] chr6 (65 HSPs)
chr6 (26-110)||(12696302-12696386)
chr6 (26-175)||(8365451-8365600)
chr6 (26-175)||(16766675-16766824)
chr6 (54-175)||(31384926-31385046)
chr6 (36-107)||(7996378-7996449)
chr6 (36-107)||(8022352-8022423)
chr6 (26-111)||(3398597-3398681)
chr6 (36-175)||(10339057-10339197)
chr6 (26-102)||(17341669-17341745)
chr6 (26-107)||(34595112-34595193)
chr6 (26-106)||(7938094-7938174)
chr6 (26-110)||(9027156-9027240)
chr6 (26-94)||(9658857-9658925)
chr6 (26-110)||(10770671-10770755)
chr6 (40-175)||(18367828-18367963)
chr6 (37-107)||(7977830-7977900)
chr6 (26-92)||(8776988-8777054)
chr6 (37-107)||(19040341-19040411)
chr6 (24-94)||(19044440-19044510)
chr6 (26-123)||(9107354-9107451)
chr6 (17-94)||(13851705-13851782)
chr6 (22-123)||(21395292-21395392)
chr6 (28-175)||(5000558-5000705)
chr6 (36-107)||(7265593-7265664)
chr6 (26-105)||(16833286-16833365)
chr6 (36-110)||(677825-677899)
chr6 (48-110)||(9025491-9025553)
chr6 (47-125)||(9195736-9195814)
chr6 (40-94)||(26562681-26562735)
chr6 (49-94)||(8389485-8389530)
chr6 (21-110)||(34073344-34073433)
chr6 (26-90)||(6389721-6389785)
chr6 (36-123)||(17302544-17302632)
chr6 (28-92)||(17841604-17841668)
chr6 (43-107)||(21924935-21924999)
chr6 (36-123)||(34290063-34290148)
chr6 (36-107)||(7801156-7801227)
chr6 (39-90)||(13364722-13364773)
chr6 (22-105)||(17435173-17435256)
chr6 (28-107)||(28152079-28152157)
chr6 (74-113)||(34197137-34197176)
chr6 (28-94)||(2153900-2153966)
chr6 (21-107)||(5732510-5732596)
chr6 (56-94)||(7569181-7569219)
chr6 (36-94)||(7723263-7723321)
chr6 (21-107)||(9629356-9629442)
chr6 (40-94)||(13360385-13360439)
chr6 (36-90)||(17168480-17168534)
chr6 (36-94)||(24833246-24833304)
chr6 (113-175)||(32978842-32978904)
chr6 (29-107)||(33001289-33001367)
chr6 (56-106)||(34895035-34895085)
chr6 (26-107)||(426514-426595)
chr6 (38-107)||(853859-853928)
chr6 (55-122)||(1532247-1532311)
chr6 (29-106)||(15489733-15489810)
chr6 (55-128)||(20576612-20576685)
chr6 (55-100)||(29220255-29220300)
chr6 (36-92)||(1681746-1681802)
chr6 (26-94)||(7086773-7086841)
chr6 (55-175)||(9522898-9523018)
chr6 (143-175)||(10649372-10649404)
chr6 (22-94)||(20518319-20518391)
chr6 (17-125)||(25038053-25038161)
chr6 (35-123)||(32313391-32313479)
[»] scaffold0306 (1 HSPs)
scaffold0306 (28-175)||(13380-13522)
[»] scaffold0152 (1 HSPs)
scaffold0152 (28-175)||(21805-21947)
[»] scaffold0122 (2 HSPs)
scaffold0122 (26-175)||(8644-8793)
scaffold0122 (40-92)||(8002-8054)
[»] scaffold0018 (2 HSPs)
scaffold0018 (26-106)||(178819-178900)
scaffold0018 (26-92)||(192264-192330)
[»] scaffold0223 (1 HSPs)
scaffold0223 (26-110)||(20150-20234)
[»] scaffold0036 (1 HSPs)
scaffold0036 (40-175)||(9679-9814)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-175)||(225200-225349)
[»] scaffold0053 (1 HSPs)
scaffold0053 (26-107)||(8776-8857)
[»] scaffold0044 (1 HSPs)
scaffold0044 (38-171)||(53170-53303)
[»] scaffold0022 (1 HSPs)
scaffold0022 (21-94)||(90816-90889)
[»] scaffold0103 (1 HSPs)
scaffold0103 (28-92)||(51791-51855)
[»] scaffold0086 (1 HSPs)
scaffold0086 (76-172)||(2956-3052)
[»] scaffold0049 (2 HSPs)
scaffold0049 (58-110)||(56932-56984)
scaffold0049 (22-106)||(63746-63831)
[»] scaffold1528 (1 HSPs)
scaffold1528 (24-110)||(1011-1097)
[»] scaffold0020 (1 HSPs)
scaffold0020 (24-110)||(135309-135395)
[»] scaffold0019 (1 HSPs)
scaffold0019 (36-175)||(71711-71852)
[»] scaffold0652 (1 HSPs)
scaffold0652 (30-107)||(462-539)
[»] scaffold0361 (1 HSPs)
scaffold0361 (40-92)||(14522-14574)
[»] scaffold0450 (1 HSPs)
scaffold0450 (36-175)||(8567-8706)
[»] scaffold0171 (1 HSPs)
scaffold0171 (76-127)||(23539-23590)
[»] scaffold0027 (1 HSPs)
scaffold0027 (17-92)||(46651-46726)
[»] scaffold0246 (1 HSPs)
scaffold0246 (26-92)||(19554-19619)
[»] scaffold0227 (1 HSPs)
scaffold0227 (40-96)||(7322-7378)
[»] scaffold0066 (1 HSPs)
scaffold0066 (40-92)||(33378-33430)
[»] scaffold0024 (1 HSPs)
scaffold0024 (56-108)||(68241-68293)


Alignment Details
Target: scaffold0008 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 263458 - 263247
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcaga 120  Q
    |||||||||||||| |||||||| | | ||||| |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||  ||||||||    
T  263458 tggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcaga 263359  T
Q  121 cacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttcaactgtgat--nnnnnnnnntgataataaaaatggttttgtcttgt 218  Q
    ||||| || ||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||           | ||||||||||||||||||||||||    
T  263358 cacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcatctgtgataaaaaaaaaatttataataaaaatggttttgtcttgt 263259  T
Q  219 atacgagctttg 230  Q
    |||| |||||||    
T  263258 ataccagctttg 263247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 36756437 - 36756276
Alignment:
Q  14 cgaacattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttag 113  Q
    ||||||| ||||||||||| | |||||||||| |||||| |||||||||||||  |||  | ||||||||||||||||||||| ||| ||||||||||||    
T  36756437 cgaacatcggatacgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttag 36756338  T
Q  114 tgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||  |||| | |||||| ||| |||   ||||||||||||| ||||| ||| ||||||||    
T  36756337 tgtcgaacacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttca 36756276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 15972848 - 15972932
Alignment:
Q  23 gatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||| ||||||||||||||||| | ||||||||||| |||| || | ||||||||||||||| ||| ||| ||||||    
T  15972848 gatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcg 15972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 30717610 - 30717462
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgat 126  Q
    |||||||| ||||||||  ||||||   |||||||||||| ||||  | ||||||||||||||||| ||| |||  ||||||||   |||| |||||||     
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 30717511  T
Q  127 acatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || ||||||| ||   || ||||||||||||||||| ||||||||||||    
T  30717510 acgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttca 30717462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 35056883 - 35056995
Alignment:
Q  63 ttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggag 162  Q
    |||||||||| ||||||||||||||||||||| | ||| |||||||||  ||||| ||||||| || ||| ||| ||  | ||||||||||||  |||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggag 35056982  T
Q  163 cgtccgtgcttca 175  Q
     ||||||||||||    
T  35056983 tgtccgtgcttca 35056995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 37419731 - 37419870
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    ||||||||||||||||   | |||||||||| ||||  | | ||||||||||||||| ||| | | |||||||||  ||||| |||||||| | ||| ||    
T  37419731 cactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccg 37419830  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | |||  |||||||||||||| ||||| ||||||||||||    
T  37419831 acaccgggacacgcctaatccgaggagtgtccgtgcttca 37419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 12668493 - 12668420
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||||  ||||||||||||| ||||  | ||||||||||||||||||||| ||| |||||||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgt 12668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 21782889 - 21782832
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    |||||||||||||||||| |||||||||||||||||  | ||||||||||||||||||    
T  21782889 cactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 20539760 - 20539672
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtg 109  Q
    |||| ||||||||| |||||||||| ||||||  |||||||||||| ||||  |||||||| |||||||||| ||| ||| ||||||||    
T  20539760 tggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 21616740 - 21616808
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| ||| |||||||||||||  |||||||||||||||||  | |||||||||||||||||||    
T  21616740 acgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 4882766 - 4882671
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgt 132  Q
    ||||||||| ||| ||  ||||| |||||| ||||  ||||||||||||||||||| ||| |||  ||||||||  ||||||||||||||||||||    
T  4882766 actgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgatacatgt 4882671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 12941016 - 12940950
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| ||||||||||  ||||| ||||||||||||| ||||  |||||||||||||||||||    
T  12941016 acgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 18421932 - 18422022
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||| ||||||||||||| ||||||||||||||||| | ||||||||| | || |  | ||||||||||||||||| ||| ||| ||||||    
T  18421932 acatcggatacgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 18841094 - 18840956
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||| || ||||||||||| ||||| ||||||||||||| |||| || |||||| |||||||||| |      |||||||     |||||||||||||    
T  18841094 acgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattaca------agtgtcg-----gtgtcagacacga 18841006  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     |||||| ||| |||  ||||| |||||||| ||||| ||||||||||||    
T  18841005 cacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 18840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 19536479 - 19536397
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| || |||||||||||||| ||||||||||||| |||| | | ||||||||||||||||| ||| ||| ||||||    
T  19536479 acgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 15657842 - 15657991
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||| |||||||||| | ||||||||||||  ||||  | ||||||||||||||||| ||  ||| ||||||||||  |||| ||| |||    
T  15657842 acgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcga 15657941  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| |||  ||  |||||||||| ||| ||||| |||| |||||||    
T  15657942 cacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttca 15657991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 21374778 - 21374705
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtca 101  Q
    ||||||| |||| ||||||||||||  |||||||||||| |||| || ||||||||||||||||| ||| ||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtca 21374705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 24975377 - 24975309
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    |||||||||||||||||   ||||||||||||||| |||| ||||| |||||||||  |||||||||||    
T  24975377 ctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac 24975309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 15909703 - 15909629
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||| ||  |||| | |||||||||| || ||||||||||||||||||| | | |||||||||||    
T  15909703 cactgacacgccgatacagctaaaattttgagaaaattacataattcagtgtaattatatgtgacagtgtcgtgt 15909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 16069338 - 16069268
Alignment:
Q  23 gatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    |||| ||||||| |||||||||||||||||   ||||||||| | ||||  ||||||||||||||||||||    
T  16069338 gatatgacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 18420504 - 18420366
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcga 136  Q
    ||||||||||| ||||| |||||||||||||||||  | |||||||| || ||||||||| ||| |||| ||||   |||| |||| || |  |||||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcga 18420405  T
Q  137 taccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     |  | |||||||||||||| || || ||| ||||||||    
T  18420404 cattatgacacgcctaatccgagaagtgtctgtgcttca 18420366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 23718006 - 23718072
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||   | |||||||||||||||||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattata 23718072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 24105678 - 24105744
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||   | |||||||||||||||||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattata 24105744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 42832343 - 42832277
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    ||||| |||||||  ||||||||||||||||| || ||| ||||||||||||||||| ||| |||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 13273069 - 13273008
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtc 117  Q
    |||| ||||||||||| ||||||||||| | |||||||||  |||||||||||||| |||||    
T  13273069 taatcatttgagaaaattatataattcaatctaattataaatgtcagtgtcgtgttggtgtc 13273008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 20242808 - 20242727
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||| || ||||||||||||||||| ||||||  ||| ||||||  | ||||||||||||||||||| | ||| ||||||    
T  20242808 acgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 39323244 - 39323317
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtca 101  Q
    ||||||| |||||| ||| ||||||  |||||||||||| |||| || ||||||||||||||||| ||| ||||    
T  39323244 gacacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtca 39323317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 6940231 - 6940299
Alignment:
Q  24 atacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||||| |||||||||||||||||  |||||||||| | |||  || |||||| ||||||||||    
T  6940231 atacgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaatta 6940299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 30404929 - 30404865
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| |||||||||||||||||   ||||||||||| ||||  | |||||||||||||||||    
T  30404929 gacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 34785063 - 34784979
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| ||||||||| ||||||| ||||||  ||| ||||||  | |||||| |||||||||||| | ||| |||||||||    
T  34785063 acgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgt 34784979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 44860327 - 44860447
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    |||||||||||||||||    ||||||||||||||||||| | ||| |||||||||| ||||  ||||||| |  ||| ||| | |  ||||| ||||||    
T  44860327 ctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaat 44860426  T
Q  155 ccaaggagcgtccgtgcttca 175  Q
     | ||||| ||||||||||||    
T  44860427 tcgaggagtgtccgtgcttca 44860447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 11223930 - 11223796
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    ||||||| |||||  |||||| ||||| ||||  | ||||||||||||||||| ||| ||| ||||| |||  ||||| ||||||| || |||  || ||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacac 11223832  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  |||||||||||||  ||||| ||||||||||||    
T  11223831 cgggacacgcctaatctgaggagtgtccgtgcttca 11223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 14996303 - 14996224
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtc 106  Q
    ||||||| |||||||| ||||||||  |||||||||||| |||| | |||||||| |||||||||| ||| ||| |||||    
T  14996303 gacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 21091706 - 21091781
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||| ||||||||| |||||||  |||||||||| ||||||  | ||| ||||||||||||| ||| |||||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtc 21091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 23921261 - 23921300
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataa 95  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataa 23921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 31456693 - 31456638
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||| |||||| ||| ||||||||||||||||||||  ||||| ||||||    
T  31456693 ctaataatttaagaaaattatgtaattcagtgtaattataagtatcagtttcgtgt 31456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 37558957 - 37559036
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| |||||||||||||||||  |||||||||||  ||||  | |||||||| |||||||| ||| ||| ||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 2438724 - 2438662
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||| ||||||| |||||| ||| |||  |||||||||||||| ||||| ||||||||||||    
T  2438724 gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 2438662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 20473301 - 20473366
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaatta 92  Q
    |||||| | |||||||| |||||||| ||||||||||| | |||||| |||||||||||||||||||    
T  20473301 cgacacagacactgacatgccgacacaactaataattt-aaaaaactcatataattcagtgtaatta 20473366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 21624244 - 21624326
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaacta-tataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| | |||||||||||||||||  |||||||||| | |||| ||  ||||||||||||||||| ||| ||| ||||||    
T  21624244 acgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 29663987 - 29664057
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaac-tatataattcagtgtaattataa 95  Q
    ||||||| | |||||||| | ||||| | |||||||||||| ||||  |||||||||||||||||||||||    
T  29663987 acgacacagacactgacatgtcgacagtgctaataatttgaaaaaatatatataattcagtgtaattataa 29664057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 30335395 - 30335461
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| ||||  ||||||||||| ||||||||||||| ||||  | |||||| ||||||||||    
T  30335395 acgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatta 30335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 30527666 - 30527608
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| || |||||  ||||||||||||||||  |||||||| ||||||||||||    
T  30527666 cactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattata 30527608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 31727846 - 31727880
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaa 71  Q
    |||||||||| ||||||||||||||||||||||||    
T  31727846 actgacacgctgacactactaataatttgagaaaa 31727880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 17776576 - 17776645
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||||| |||| || | ||||||||| ||||||| | |||| |||||||||||||| | |||||||||    
T  17776576 actgacacaccgataccaataataatttaagaaaaccacataagtcagtgtaattatatgtgtcagtgtc 17776645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 23058524 - 23058439
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| || ||||||||| |||| | ||||||||||| |||| | | ||||| ||||||||||| ||| ||| |||||||||    
T  23058524 acgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgt 23058439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 27084245 - 27084302
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgta 88  Q
    |||| ||| ||||| |||||||| |||||||||||||||||  |||||||||| ||||    
T  27084245 acggacacggacactccgacactgctaataatttgagaaaatcatataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 31018564 - 31018649
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||| || |||||||||||| ||||  |||||||||| ||||||  | || ||| |||||||||||| | ||| ||||||    
T  31018564 ggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcg 31018649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 31284036 - 31284093
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    |||| ||||||||||||| |||||||||||||||||  | ||||| || |||||||||    
T  31284036 cacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaattat 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 31808065 - 31808134
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgt 105  Q
    ||||||||| |||||||  |||||||||| | ||||  | ||||||||||||||||||| | ||||||||    
T  31808065 cactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 18255979 - 18255947
Alignment:
Q  143 gacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||||||||||||| ||||||||||||    
T  18255979 gacacgcctaatccaaggagtgtccgtgcttca 18255947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 25544489 - 25544556
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc-gtgttagtgtcagacac 123  Q
    ||||||||||||||||  ||||||||||||||||| ||| | ||| ||||| |||| ||||||||||||    
T  25544489 taataatttgagaaaatgatataattcagtgtaatcataggtgtc-gtgtcggtgtcagtgtcagacac 25544556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 34691857 - 34691805
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||| ||||  ||||||||||||||||||||| | ||| ||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 34714269 - 34714217
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||| ||||  ||||||||||||||||||||| | ||| ||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 37411313 - 37411257
Alignment:
Q  38 ctgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| ||||||||  |||||||||||||||||  | |||||||||||| ||||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattata 37411257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 30838192 - 30838335
Alignment:
Q  30 cacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgataca 129  Q
    ||||| |||||| ||| ||| ||| |||||||||||| |||| ||||||||| ||||||||||||||  || ||||||||| |||||| ||| ||| ||     
T  30838192 cacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacg 30838291  T
Q  130 tgttcgataccaagacacgcctaatccaaggagcgtccgtgctt 173  Q
    ||| ||| |||||||||||||||| || ||||| ||||||||||    
T  30838292 tgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 30982960 - 30982810
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagac 121  Q
    ||||||||||||| ||| ||||||||   ||  ||||| |||||||||||  | ||| ||||||||||||||||| ||| |||||||||  |||||||||    
T  30982960 ggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagac 30982864  T
Q  122 acgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||| || ||| ||| |||  |||||||||||||||| ||| ||||||||||||    
T  30982863 acgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttca 30982810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 24613768 - 24613633
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    |||||| |||||| ||||||||||||||||||  | |||||||| ||||| || ||| ||| ||||| |||  ||||||||||||| || |||  || ||    
T  24613768 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacac 24613669  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || |||||| ||||||| ||||| ||||||||||||    
T  24613668 caggacacgtctaatcctaggagtgtccgtgcttca 24613633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 36635302 - 36635446
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||| ||| |||||||||||| |||| ||||||||||||||||||  | ||||||||||||||||||| | ||     |||||| ||||||||||||||    
T  36635302 acgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt-----tcgtgtgagtgtcagacacga 36635396  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     ||  ||  || |||  |||||||||||||| | ||| ||||||||||||    
T  36635397 cacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttca 36635446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 40742564 - 40742667
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcaga 120  Q
    |||||||||||||| || ||| |||||||||| | ||||||||||||||||  |||||||  |||||||||||| | |||  ||||||||  ||||||||    
T  40742564 tggatacgacacggacattgaaacgccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcaga 40742663  T
Q  121 cacg 124  Q
    ||||    
T  40742664 cacg 40742667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 847929 - 848078
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | ||||||||||||||  |  ||||||||||||||||| || |||||||| | |||||| ||| ||| ||||| |||| ||||| |||||||    
T  847929 acgacacagacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacga 848028  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || |||   | |||  ||||| |||||||||||||| ||||||| ||||    
T  848029 aacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttca 848078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 27706258 - 27706129
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||| || |||||||||| |||||| | ||||||||| | ||||  | |||||| |||||||||| ||| || |||||||||||| |||| |||||||    
T  27706258 acgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacga 27706159  T
Q  126 tacatgttcgataccaagacacgcctaatc 155  Q
     || | | |||||||  |||||||||||||    
T  27706158 cacgtatccgataccgggacacgcctaatc 27706129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 30298926 - 30299008
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcgtg 109  Q
    ||||||| |||||||||||||||||  |||||||||||| |||| | | ||||||||||||||||| ||| ||| ||||||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 30327794 - 30327876
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcgtg 109  Q
    ||||||| |||||||||||||||||  |||||||||||| |||| | | ||||||||||||||||| ||| ||| ||||||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 12797422 - 12797338
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||| ||||||||||||| ||  ||||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||    
T  12797422 ggatacgacacggacactgacacgccggcaaaactaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 3947833 - 3947704
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    |||| ||||||||  |||||||||||| ||||    ||||||||||||||||| ||| |||||||||      ||||| ||||||| || ||| ||| ||    
T  3947833 gacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtc------gtgtcggacacgacacgtgtccgacac 3947740  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || ||||| |||||||| ||||| ||||||||||||    
T  3947739 caggacacacctaatccgaggagtgtccgtgcttca 3947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 24343485 - 24343553
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| | | |||||||||||||   |||||||||||||||| || |||||||||||||||||||    
T  24343485 acgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 37698719 - 37698758
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattata 37698758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 4383351 - 4383444
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||| |||||||||| ||| || ||||||||||||| ||| | | ||||||||||||||||| ||  |||||||||||||  |||||| ||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttgaaaaatc-acataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacga 4383444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 16073448 - 16073510
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||| |||||||||||||| ||| || |||||||||||||||| ||||| |||| |||||||    
T  16073448 gtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttca 16073510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 35952684 - 35952614
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| |||| |||||||||||| ||||  |||||||||| |||||||||| |  ||||||||||||    
T  35952684 gacacgccgccactgctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgt 35952614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 5414253 - 5414104
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| ||| |||||||||||||  |||||  ||| ||||||  | | ||| ||||||||||||| |  || ||||||||| |||||| |||||||    
T  5414253 acgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacga 5414154  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || |||  || ||   ||||| ||| |||||||||| ||||||||||||    
T  5414153 cacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttca 5414104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 12895359 - 12895274
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||  || |||||||||||||| | ||||||||||| ||||  | ||||||  ||||||||||||| ||| ||||||    
T  12895359 ggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcg 12895274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 19482646 - 19482795
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | ||||||||||||||||| ||||||||||||| || |  | ||||||| ||||||||| ||| ||  |||||||||  || |  |||||||    
T  19482646 acgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacga 19482745  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| ||   ||||| |||||||| ||||| || |||||||||    
T  19482746 cacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttca 19482795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 22234967 - 22234822
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgataca 129  Q
    |||| ||| |||||||||||||  |||| ||||||| |||| | | |||||||||||||||| || | ||| |||||||||  ||||| ||||||| ||     
T  22234967 acggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacg 22234868  T
Q  130 tgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||| ||| |||| |||||  ||||||| || || || |||||||||    
T  22234867 tgtccgacaccaggacacagctaatccgagaagtgttcgtgcttca 22234822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 23293067 - 23292986
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| || ||||||||||||||  |||||||||||| ||||  | |||||||||| |||||| ||| ||| ||||||    
T  23293067 acgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 23292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 35158063 - 35157986
Alignment:
Q  29 acacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||| ||||||||||||||| | ||||||||||||  ||||  | |||||| |||||||||||||| ||| |||||    
T  35158063 acacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 35723456 - 35723383
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaa-ctatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    |||||||||||||||||  |||||||||||||||||   | |||||||| |||||||||| | |||||||||||    
T  35723456 cactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgt 35723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 56257933 - 56257978
Alignment:
Q  48 gacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 14126197 - 14126117
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtca 101  Q
    |||| ||||||| | |||| |||||||||||||  ||||||||||| |||   | ||||||||||||||||||||| ||||    
T  14126197 tggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtca 14126117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 47263993 - 47264113
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    |||||||||||  ||||  | ||||||| ||||||||| ||  |||  |||| |||| |||||||| |||| ||||||  || |||| ||||||||||||    
T  47263993 ctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaat 47264092  T
Q  155 ccaaggagcgtccgtgcttca 175  Q
    || | ||||||| ||||||||    
T  47264093 ccgaagagcgtctgtgcttca 47264113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 54580087 - 54580023
Alignment:
Q  43 acgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||| ||||| ||||||||||||| ||||  | ||||||||||||||||||||| ||| ||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 21945491 - 21945562
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||| ||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||    
T  21945491 cactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 21945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 38847079 - 38847012
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||| |||||||  |||||||||||| ||||  |||| |||||||||||||| ||| ||||||||||    
T  38847079 gacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcg 38847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 40179715 - 40179636
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| ||||||||||  ||||| | ||||| ||||| ||||  | ||||||||||||||||||| ||||| ||||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcg 40179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 40613441 - 40613496
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||||||  |||||| ||||||||||  | |||||||||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattata 40613496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 9299125 - 9299056
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||||||||| ||| | |||||||||||||||||  |||| ||| |||||||||||| | |||||||||    
T  9299125 cactgacacgccaacattgctaataatttgagaaaataatat-attaagtgtaattatatgtgtcagtgtc 9299056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 15029753 - 15029811
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||| |||||| |||||||||||| || |  | |||||||||||||||||||    
T  15029753 cactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattata 15029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 20743349 - 20743295
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    |||||||||||||||||   ||||||||||||||||  | |||||||||||||||    
T  20743349 cactgacacgccgacacggataataatttgagaaaatgacataattcagtgtaat 20743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 21539938 - 21539880
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||| |||||||| | ||||||||| ||||||  |||||||| ||||||||||||    
T  21539938 cactgacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattata 21539880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 40481615 - 40481680
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| | |||||||||||||| || ||||||||||||| ||||  | |||||||||||||||||    
T  40481615 acgacactgacactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaatta 40481680  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 49431003 - 49431085
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||| ||| || ||||||||||||||  |||||||||||| |||| | | ||||||||||||||||| ||| ||| ||||||    
T  49431003 acgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcg 49431085  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 8423779 - 8423730
Alignment:
Q  46 ccgacactactaataatttgagaaaactatataattcagtgtaattataa 95  Q
    |||||||  |||||||||||||||||  | ||||||||||||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataa 8423730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 16303352 - 16303263
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||| |||| |||| ||||||||||||||||    ||||| ||||| ||||  |||||||| |||||||||| ||| ||| |||||||||    
T  16303352 tggacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 20633550 - 20633587
Alignment:
Q  138 accaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||||||||||||||||||||| || |||||||||    
T  20633550 accaagacacgcctaatccaaggagtgttcgtgcttca 20633587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 2362043 - 2361975
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||| |||||||  |||||||||||| |||| || |||||| |||||||||| ||| ||| ||||||    
T  2362043 tgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 6285105 - 6285045
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgt 116  Q
    ||||||||||||||||| |||||||||| | | |||||| | |||| ||| ||||||||||    
T  6285105 taataatttgagaaaacaatataattcaatatgattataggtgtcactgtggtgttagtgt 6285045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 17345486 - 17345450
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaac 72  Q
    |||||||||||||||||  ||||||||||||||||||    
T  17345486 cactgacacgccgacaccgctaataatttgagaaaac 17345450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 26504384 - 26504312
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||| ||||||| |||||| ||  ||||||| |||||||||| ||||||  | ||| |||||||||||||||    
T  26504384 ggatatgacacggacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaattata 26504312  T

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Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 28812507 - 28812638
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    ||||||||||||| |||||||||||||  |||  | ||||||||||||| ||| ||| ||| |||||||||| |||||||||||||||||||| ||| |     
T  28812507 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacag 28812606  T
Q  140 caagacacgcctaatccaaggagcgtccgtgc 171  Q
    || |||||||||||||| ||||| ||| ||||    
T  28812607 caggacacgcctaatccgaggagtgtctgtgc 28812638  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 14216870 - 14217019
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||| |||||| ||||||||||| | || |  ||||||||||||||||||| ||| ||| |||||||||||||||| |||||||    
T  14216870 acgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14216969  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| ||   ||||| |||||||| || || ||||||||||||    
T  14216970 cacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14217019  T

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Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 14222999 - 14223148
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||| |||||| ||||||||||| | || |  ||||||||||||||||||| ||| ||| |||||||||||||||| |||||||    
T  14222999 acgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacga 14223098  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| ||   ||||| |||||||| || || ||||||||||||    
T  14223099 cacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14223148  T

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Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 8383230 - 8383316
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||| ||||||||| || ||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  8383230 tggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 8039903 - 8039786
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgata 138  Q
    ||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||  ||||| |||| || |||||| ||| |    
T  8039903 tgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgaca 8039804  T
Q  139 ccaagacacgcctaatcc 156  Q
    ||  ||||||| ||||||    
T  8039803 ccgggacacgcttaatcc 8039786  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 14209105 - 14209240
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    ||||||||||||| ||||||||||| | ||||  | ||||||||||||||||| ||| |||||||||||||  ||||| ||||||| || ||| ||| |     
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacat 14209204  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  || || ||||||||||| || ||||||||||||    
T  14209205 cgggatacacctaatccaagaagtgtccgtgcttca 14209240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 9800018 - 9800147
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||  |||||||||||||||||  ||||||||||||||||| || ||||||| |||||||| |||| ||| |||||||||  || ||||| | ||    
T  9800018 acgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagagatga 9800117  T
Q  126 tacatgttcgataccaagacacgcctaatc 155  Q
    ||| |||  || |||  |||||||||||||    
T  9800118 tacgtgtcggacacctggacacgcctaatc 9800147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 4987362 - 4987223
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    |||||||||||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||  ||| |||||  ||||  ||||||| || ||| ||    
T  4987362 cactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccg 4987263  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | |||  |||||||||||||| ||||| |||||| |||||    
T  4987262 acaccgggacacgcctaatccgaggagtgtccgtacttca 4987223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 55401049 - 55401191
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagac 121  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||| ||||  | |||||| |||||||||| ||| ||| ||||||           |||    
T  55401049 ggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg-----------gac 55401137  T
Q  122 acgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||| || ||| ||| ||| ||||||||||||||| ||||| ||||||||||||    
T  55401138 acgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 55401191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 4991048 - 4990950
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacg 124  Q
    |||||||||  |||||||| |||||||  |||||| |||||||||| || ||||||||||||||||| ||| ||| | |||||||| || |||||||||    
T  4991048 acgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacacg 4990950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 17005690 - 17005604
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagaca 122  Q
    ||||||| | || |||| ||||||||||||| ||||  ||||||||||||||||||||||| ||| |||| ||||| ||||||||||    
T  17005690 cactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagaca 17005604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 15796375 - 15796226
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| || ||||||||||||||   ||||||||||| ||||  ||||||||||||||||||| ||  ||| |||||||||  ||||| ||||| |    
T  15796375 acgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaa 15796276  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| | | |||   ||||||||||||||| ||| || |||||||||    
T  15796275 cacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttca 15796226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 10455763 - 10455859
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtc 117  Q
    |||| ||||||| |||| ||||||||| ||||| |||||||| ||||||||  |||||| | |||||||||||| | ||  ||||||||||||||||    
T  10455763 tggacacgacacaggcattgacacgccaacactgctaataatatgagaaaatcatataactaagtgtaattatatgtgttggtgtcgtgttagtgtc 10455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 12703999 - 12704053
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||||| ||||||||||||||||||  | |||||||||||||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaattata 12704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 24205122 - 24205052
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    ||||||||| |||||||||||||||||   ||||||||||||||||  | ||||| |||||||||||||||    
T  24205122 acgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataag 24205052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 41961731 - 41961582
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | ||||||||||||| ||| ||||||||||||| || |  | || |||| ||||||||| ||| ||| |||||||||  || || |||||||    
T  41961731 acgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacga 41961632  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| ||   |||||||||||||| || || ||||||||||||    
T  41961631 cacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttca 41961582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 14618759 - 14618823
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    |||||||||||||||| |||| |||||  |||||||||| ||||||| | |||||||||||||||    
T  14618759 acgacacgggcactgagacgctgacacccctaataatttaagaaaaccacataattcagtgtaat 14618823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 34910309 - 34910377
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    ||||||||||||| ||||||||||||| ||||  | ||||||||||||||||| ||| ||| |||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgt 34910377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 10954940 - 10955011
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||||| ||||||||||||| ||||  | ||||||||||||||| | ||| ||| ||||||    
T  10954940 cactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcg 10955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 11493441 - 11493374
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||| || ||||||| |||||| ||||||||| ||||||||  | |||||||||||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 28917979 - 28918062
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtg 109  Q
    |||||||||  |||||||||||||||   |||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||||    
T  28917979 acgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 29112356 - 29112293
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||| ||||||||||  ||||| |||||| |||||||||||  |||||||||||||||||||||    
T  29112356 acggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 29112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 8842383 - 8842445
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||||||||| ||||||| ||||   ||||||||||||||| ||||| ||||||||||||    
T  8842383 gtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttca 8842445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 12083909 - 12083959
Alignment:
Q  54 actaataatttgagaaaactatataattcagtgtaattataagcgtcagtg 104  Q
    |||||||| |||||||||||| ||||||||||||||||| ||| |||||||    
T  12083909 actaataaattgagaaaactacataattcagtgtaattacaagtgtcagtg 12083959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 25948966 - 25948884
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||| |||||||| ||||| ||  |||||||||||| ||||  | ||||||||||||||||||||| ||  |||||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgt 25948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 26492286 - 26492220
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| ||||||||||||||||   |||||||||||| ||||  ||| |||||||||||||||    
T  26492286 acgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaatta 26492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 29508435 - 29508566
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg-tgttagtgtcagacacgatacatgttcgat 137  Q
    |||||| |||| || ||||||||||||| ||||  |||||||||||||||||||||       |||||| |||| ||||| ||||||| ||| || |||     
T  29508435 tgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattata------tgtgtcgatgttggtgtcggacacgacacacgtccgac 29508528  T
Q  138 accaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||  |||||| |||||||||| || ||||||||||||    
T  29508529 accgggacacgtctaatccaagaagtgtccgtgcttca 29508566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 10268568 - 10268487
Alignment:
Q  25 tacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    ||||||| || |||||||||||||||||   ||||||||||| ||||  | |||||| |||||||||| ||| |||||||||    
T  10268568 tacgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 16000097 - 16000016
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| | ||||||||||||||||| ||||||||||| | ||||  | |||||||||||||| || ||| ||| ||||||    
T  16000097 acgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcg 16000016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 20503453 - 20503522
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgt 105  Q
    ||||||||||||||||| || |||||||||| ||||  | ||||||||||||||||| ||| ||| ||||    
T  20503453 cactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 10335367 - 10335327
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttga 66  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  10335367 acgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 11313861 - 11313797
Alignment:
Q  46 ccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||| |||||||||||||||||  | |||||| |||||||||||| | || ||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 16789020 - 16789096
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgt 132  Q
    ||||||||| | ||||  ||||||||||||||||||||||| ||  ||||||||| |||||| |||| || ||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgt 16789096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 25652112 - 25652044
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| |||| ||||||| ||||   ||||||||||||||||  ||||||||||||||| |||||    
T  25652112 acgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgtagttata 25652044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 26290359 - 26290431
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    ||||||||||||||||| | ||||||||||||||||  | ||| ||| || |||||||| | |||||||||||    
T  26290359 cactgacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 32804621 - 32804553
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||| ||||| ||||||||   ||||||||||||||||  | |||||| ||||||||||||    
T  32804621 acgacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattata 32804553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 2620134 - 2620071
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaa 89  Q
    ||||| ||| ||||||||||||||||| |||||| |||||||||||  | |||||| |||||||    
T  2620134 acgactcggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaa 2620071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 8587100 - 8587021
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| |||||||||||||||||  ||| |||||||| ||||  | |||||| |||||||||| ||| ||| ||||||    
T  8587100 gacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 11665951 - 11666070
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    |||||||||||| ||||  | | |||| |||||||||||| | ||| ||||||||||  ||| |||||||| || |||  |||| |   |||||||||||    
T  11665951 ctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaat 11666050  T
Q  155 ccaaggagcgtccgtgcttc 174  Q
     ||||||| |||||||||||    
T  11666051 tcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 14747549 - 14747624
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||||||  |||||||||||| |||| | | |||||| |||||||||| ||| ||| |||||||||    
T  14747549 cactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgt 14747624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 14840377 - 14840302
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    |||| |||||||||  || |||||||| |||| | ||||||||| ||||||  | |||||||||||||||||||||    
T  14840377 tggacacgacacggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattataag 14840302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 14223934 - 14223872
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgta 88  Q
    ||||||| | ||| |||||||||||||   ||||||||||||||||| |||||||| ||||||    
T  14223934 acgacacagacaccgacacgccgacacagataataatttgagaaaacgatataatttagtgta 14223872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 14832091 - 14832205
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    |||||||||| ||  |||||||||||| ||||  | |||| ||| |||||||| ||| |||||||||||||  || || ||||||| || ||| ||| ||    
T  14832091 gacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacac 14832190  T
Q  140 caagacacgcctaat 154  Q
    |  ||||||||||||    
T  14832191 cgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 12674582 - 12674537
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaa 71  Q
    ||||||||| || |||||| |||||||| |||||||||||||||||    
T  12674582 acgacacggacattgacacaccgacactgctaataatttgagaaaa 12674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 16192801 - 16192732
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||||||||||  | ||||||||||||||||||| | ||   ||||||||  |||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacga 16192732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 25093480 - 25093561
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| | |||| |||||||||||||  |||| |||||||||||  | | ||||||||||||||||| | ||| ||||||    
T  25093480 acgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 25093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 3865635 - 3865591
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaac 72  Q
    ||||||| |||||||||||||||||  |||||||||||| |||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttgaaaaaac 3865591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 21479106 - 21479162
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||||||||||||||  |||||||||||| ||||  | | |||||||||||||||    
T  21479106 cactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 49505206 - 49505154
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||||||||  | |||||| |||||||||||| | ||||||||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 241572 - 241721
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||||||||||  |||||||||||  ||||  | |||||| ||||||||||| || ||| |||||||||| ||||| |||||||    
T  241572 acgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacga 241671  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| |||  |||||||||||||| || || ||||||||||||    
T  241672 cacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 241721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 15816205 - 15816061
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacat 130  Q
    |||| ||||||||||||||||| ||||||||||||| ||||  | |||||| |||||||||||||| ||| |||||||||| ||||| ||||||| ||      
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacga 15816106  T
Q  131 gttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     | ||| |||  |||||||||||||| || || ||||||||||||    
T  15816105 atccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 15816061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 22651954 - 22652103
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||  | |||||||| | |||||| ||| ||| |||||||||  ||||| |||||||    
T  22651954 acgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacga 22652053  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     |  ||| ||| |||  |||||| ||||||| ||||| ||||||||||||    
T  22652054 catgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttca 22652103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 4673515 - 4673357
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgt 116  Q
    |||| ||| ||||||| | |||||||||||||||||   ||||||||||| ||||  ||| ||||||||||||||| |||  |||||||| ||||  |||    
T  4673515 acatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtcttgttgatgt 4673416  T
Q  117 cagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | |||||||  ||| | ||| |||   ||||||||||||||||||| ||| ||||||||    
T  4673415 cggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttca 4673357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 29510385 - 29510236
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||  | | |||||||| |||||| ||| ||| |||| ||||  ||||| |||||||    
T  29510385 acgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacga 29510286  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
      | ||| ||| |||  ||||| |||||||| ||||| ||||||||||||    
T  29510285 cgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 29510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 29447177 - 29447042
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    |||||| |||||| ||||||||||||||||||  | |||||||| ||||| || ||| ||| ||||| |||  ||||| ||||||| |  |||  || ||    
T  29447177 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacac 29447078  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || |||||||||||||| ||||| ||||||||||||    
T  29447077 caggacacgcctaatcctaggagtgtccgtgcttca 29447042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 11927150 - 11927018
Alignment:
Q  43 acgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaa 142  Q
    |||||||||||  ||||||||||| ||||  | ||||||||||||||||||| | ||| |||||||||| |||||| |||||| |  | | | | | | |    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcga 11927051  T
Q  143 gacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||||||| | ||| ||||||||||||    
T  11927050 gacacgcctaatccgatgagtgtccgtgcttca 11927018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 24362287 - 24362199
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||||| | ||| |||||||||||||  |||||||||||||| ||  | ||||||||||||||||||| | |||| ||||||||    
T  24362287 ggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgt 24362199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 44067504 - 44067643
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac-gatacatgttc 134  Q
    |||||||||||||||||   ||||||||||||||||  | ||||| ||||||||||||||| ||| ||||||   | ||||| ||||| ||| | ||| |    
T  44067504 cactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggtgtcgtgtcggacactgatgcgtgtcc 44067602  T
Q  135 gataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || |||| |||||||||||| | ||||| ||||||||||||    
T  44067603 gacaccaggacacgcctaattcgaggagtgtccgtgcttca 44067643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 7658458 - 7658509
Alignment:
Q  43 acgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagtgtaattata 7658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 11944658 - 11944792
Alignment:
Q  41 acacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatacc 140  Q
    |||||||||||||  ||||||||||| ||||  | |||| |||||||||||||| | ||| ||||||||||  ||||| |||||| |  | | ||| |||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacacc 11944757  T
Q  141 aagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     ||||||||||||||| | ||| || |||||||||    
T  11944758 gagacacgcctaatccgatgagtgttcgtgcttca 11944792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 926869 - 926788
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||    ||  ||||||||||||||||| ||| ||||||    
T  926869 acgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcg 926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 13009544 - 13009425
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg-tgttagtgtcagacac-gatacatgttcgataccaagacacgcctaa 153  Q
    ||||||||||||||||| |||||||| |||||||| ||||| ||| |||||| |||  ||||||||||| ||  | ||| ||| ||   |||||||||||    
T  13009544 taataatttgagaaaacaatataatttagtgtaatcataagtgtc-gtgtcggtgtaggtgtcagacaccgacgcctgtccgacacgg-gacacgcctaa 13009447  T
Q  154 tccaaggagcgtccgtgcttca 175  Q
    ||||||||||||||||||||||    
T  13009446 tccaaggagcgtccgtgcttca 13009425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 36450833 - 36450769
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||  | | |||||||||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 2572142 - 2572023
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcaga 120  Q
    |||| |||||||||  || |||||| ||||||  |||||||||||| ||||  | |||||| |||||||||| ||| ||| |||||||||  ||||| ||    
T  2572142 tggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcgga 2572043  T
Q  121 cacgatacatgttcgatacc 140  Q
    ||||| || ||| |||||||    
T  2572042 cacgacacgtgtccgatacc 2572023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4786409 - 4786338
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||||| | ||||||||| ||||||  | ||||||||||||||||||| | ||| ||||||    
T  4786409 cactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 8343284 - 8343443
Alignment:
Q  16 aacattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtg 115  Q
    ||||| ||| ||||||| | ||| ||||| ||||||   |||||||||||| ||||  | |||||| |||||||||| ||| |||||||||||    |||    
T  8343284 aacatcggacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtg 8343383  T
Q  116 tcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || ||||||| || ||| ||| |||  |||||||||||||| | ||| ||| ||||||||    
T  8343384 tccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttca 8343443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 13844663 - 13844596
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||||| |||||||||||||||||  | |||||| |||||||||||| | ||| ||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 28385025 - 28384938
Alignment:
Q  76 ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacg-atacatgttcgataccaagacacgcctaatccaaggag 162  Q
    ||||||||||||||||||| | ||| ||||| ||| ||||||||||||| | ||||||  ||| ||| || |||||||||||||||||    
T  28385025 ataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgtacacatgtctgatgccaggatacgcctaatccaaggag 28384938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 4122300 - 4122182
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatc 155  Q
    |||||||| || |||| ||||||||||| |||||||||| | ||| |||| |||| | ||||| |||||| || |||| || |||   ||||| ||||||    
T  4122300 taataattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgttggacaccggaacacgtctaatc 4122201  T
Q  156 caaggagcgtccgtgcttc 174  Q
    ||| ||| |||||||||||    
T  4122200 caaagagtgtccgtgcttc 4122182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 14134691 - 14134745
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| ||||| |||||||||||||||||||  | |||||||||||||||||||    
T  14134691 gacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 18170563 - 18170497
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| ||||||||||||||||| | ||| ||||||| |||| || |||||||| ||||||||    
T  18170563 acgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaatta 18170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 18634131 - 18634065
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| ||||||||||||||||| | ||| ||||||| |||| || |||||||| ||||||||    
T  18634131 acgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaatta 18634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 22204622 - 22204699
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaa--aactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||| ||||||||||||||||| ||||||||||| | ||  |  |||||||||||||||||||| ||| |||||||||    
T  22204622 acggacactgacacgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtgtcagtgtc 22204699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 31236644 - 31236590
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||| |||||||||||||||||  | |||||||| ||||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattata 31236590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 9382960 - 9383017
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    |||||||||||||| || |  |||||||||||||||||| |||||||| |||||||||    
T  9382960 cactgacacgccgataccatgaataatttgagaaaactacataattcaatgtaattat 9383017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 24669411 - 24669492
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| | ||||||||||| |||||   |||||||||||| ||| || ||||||||||||||||| ||| ||| ||||||    
T  24669411 acgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 27067360 - 27067282
Alignment:
Q  45 gccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||||| |||||| ||||||||||| || |||||||  |||||||| ||| |||||||||||||  ||||| |||||||    
T  27067360 gccgacaccactaatgatttgagaaaattacataattc--tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacga 27067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 3025558 - 3025610
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||||||||  | ||||||||||||||||||| | ||||||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 13203647 - 13203687
Alignment:
Q  54 actaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  13203647 actaataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 27213525 - 27213593
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||  || |||||||||||||| |||||||||| ||||||  | |||||||| ||||||||||    
T  27213525 acgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaattata 27213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 12606889 - 12606842
Alignment:
Q  47 cgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  12606889 cgacactgctaataatttgagaaaatcatataattcaatgtaattata 12606842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 25192437 - 25192358
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    |||| ||| |||| |||| |||||||||||||||||  |||||||||||| |||   | |||||||||| ||||||||||    
T  25192437 acatcggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataag 25192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 31109597 - 31109518
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| |||||||||||||||||   ||||||||||||||||  | | |||||||| ||| |||| | ||||||||||    
T  31109597 gacacggacactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtcagtgtcg 31109518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 31557050 - 31557097
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaagg 160  Q
    ||||||||||||| |||||| ||| |||| ||||||||||||||||||    
T  31557050 gtgtcagacacgacacatgtccgacaccaggacacgcctaatccaagg 31557097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 34897068 - 34897131
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||| ||| |||||| ||||||  |||||||||||||||||  | |||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattata 34897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 20679466 - 20679396
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||||| | ||||||  |||||||||||||||||  | ||| ||||||||||||||||| ||| |||||    
T  20679466 cactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 24413641 - 24413559
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataattt-gagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| ||||||||  | |||||   ||||||||| ||||||| || ||||||||| ||||||||||| ||||||||||    
T  24413641 acgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattcagggtaattataagtgtcagtgtcg 24413559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 25566848 - 25566910
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtc 117  Q
    |||||||||||| ||||  | ||||||||||||||||| ||| ||| |||||||||| |||||    
T  25566848 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 30271362 - 30271288
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||||||  ||||| |||||| ||||  | ||||| ||||||||||| ||| | |||||||||||    
T  30271362 cactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgt 30271288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 39954346 - 39954292
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||  |||||||||||||||||  | |||||| ||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 11803237 - 11803386
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||  |||||| || | ||||||  ||||||||| ||||||  | ||||||||||||||||||| | ||  |||| ||||| ||||  || ||||    
T  11803237 acgacacgaacactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacga 11803336  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     |||||| ||| ||    ||||| ||||||| ||||| ||||||||||||    
T  11803337 cacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttca 11803386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 20873047 - 20873128
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| ||||||||||||||||    ||||||||||| ||||  | |||||| |||||||||| ||| ||| ||||||    
T  20873047 acgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 25172782 - 25172677
Alignment:
Q  23 gatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagaca 122  Q
    |||| |||||||  ||||| | || |||||| |||||||||||| |||| || ||| || | |||||||||| | ||| ||||||||| | |||| ||||    
T  25172782 gatatgacacggatactgatatgctgacactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggaca 25172683  T
Q  123 cgatac 128  Q
    ||||||    
T  25172682 cgatac 25172677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 4611532 - 4611580
Alignment:
Q  46 ccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||  |||||||||||||||||  | |||||||||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattata 4611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 14634206 - 14634154
Alignment:
Q  42 cacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||| ||||||  |||| ||||| |||||| ||||||||||||||||||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattata 14634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 22595982 - 22596038
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||||||||||||||  |||||||||| | ||||  | |||||||||||||||||    
T  22595982 cactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 29776014 - 29776082
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| || ||||| | ||||||| |||||||||||||||||  |  ||||||||| ||||||||    
T  29776014 acgacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattata 29776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 27945019 - 27945103
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||| ||| ||| |||||||||    
T  27945019 acgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 32308108 - 32308247
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    |||||||||||||||||  |||||||||||||||||  | |||||||||||||||| || | |||||||||||||  ||||  ||||||| |||||| ||    
T  32308108 cactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccg 32308207  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | ||| ||||||  ||||||| ||||| || | |||||||    
T  32308208 acaccgagacacagctaatccgaggagtgttcatgcttca 32308247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 24339620 - 24339769
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||| || || ||||||||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||| |||||||||  ||||| |||||||    
T  24339620 acgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 24339719  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || | | ||| |||  |||||||||||||| ||||| | ||||||||||    
T  24339720 cacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttca 24339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 7438694 - 7438833
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    |||||||| ||||||||   ||||||||||| ||||  | |||||||| |||||||| ||| ||| ||||| |||  |||||| |||||| |||||| ||    
T  7438694 cactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcg 7438793  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | || | |||||||||||| ||||||| ||||||||||||    
T  7438794 acactaggacacgcctaattcaaggagtgtccgtgcttca 7438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 9408405 - 9408266
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    ||||||||| ||||||| | ||||||||||| ||||  | |||||| |||||||||| ||| ||| ||||||| |  ||||||||||||||| || | ||    
T  9408405 cactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccg 9408306  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | ||||| ||||||||||||| | ||  ||||||||||||    
T  9408305 acaccaaaacacgcctaatccgaagaatgtccgtgcttca 9408266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 18013155 - 18013071
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| ||||||||  | ||||||||||||||||| | |||| || ||||||||||||||||||| | |||||||||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 6630983 - 6630864
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    ||||||||||||||||| |||||||||||||||||   |  |||||||||||||||||| | |||  ||||||||| ||||| ||||| | || ||  ||    
T  6630983 cactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccg 6630884  T
Q  136 ataccaagacacgcctaatc 155  Q
    | |||||||||| |||||||    
T  6630883 acaccaagacacacctaatc 6630864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 10042912 - 10042999
Alignment:
Q  23 gatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||| |||| |||||||||||| ||||||||||||| |||   | |||||| || ||||||||||| |||||||||||||    
T  10042912 gatacgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgt 10042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 5235955 - 5236032
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||| ||||||| | |||||||||| ||||||  |||||||||| |||||| ||||||||| ||||||||||||    
T  5235955 acattggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 26033513 - 26033393
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    |||||||||||| ||||  | ||||||||||||||||| ||| ||| || ||||||  |||||||||| || || ||| |||||||  ||||| ||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaat 26033414  T
Q  155 ccaaggagcgtccgtgcttca 175  Q
    || ||||| ||||||| ||||    
T  26033413 ccgaggagtgtccgtgtttca 26033393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 4017880 - 4017805
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    |||| ||||||||| ||| |||||||||||||   ||||||||||||||||| |||||||| |||||||| |||||    
T  4017880 tggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataag 4017805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 22868030 - 22868097
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagt 103  Q
    ||||||||||||||||| ||||||||| ||||||||  | ||||||||||||||||||| | ||||||    
T  22868030 cactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 5409921 - 5409774
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagac 121  Q
    |||||||||| || ||||||||||| || ||  |||||||||||| ||||  | ||||||||||| ||||| ||| ||| |||||      ||||| |||    
T  5409921 ggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtc------gtgtcggac 5409828  T
Q  122 acgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||| || ||| ||| |||  |||||||||||||| ||||| ||||||||||||    
T  5409827 acgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttca 5409774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 27229342 - 27229264
Alignment:
Q  76 ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    |||||| ||||||||||||||  || ||||||||| | ||||||||||||||| ||||||| || | ||||||||||||    
T  27229342 ataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaat 27229264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 43027566 - 43027407
Alignment:
Q  10 gatgcgaacattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtg 109  Q
    |||||| ||| |||| ||||||||| |||||||||| |||| |  |||||||||||| ||||  | ||||| |||||||| || ||| ||| |||||       
T  43027566 gatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtc--- 43027470  T
Q  110 ttagtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
       ||||||||||||| || ||| ||| |||  |||||||||||||| | ||| ||||||||||||    
T  43027469 ---gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttca 43027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 13770660 - 13770753
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||| ||| ||||||||| |||||| ||||||||||  |||||||||| | |||| || ||||||||||||||||| ||| |||  ||||||||    
T  13770660 acatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgt 13770753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 23128728 - 23128651
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtc 117  Q
    ||||||| ||||| | ||||||||||||||||| ||||||||||||||||| ||| | ||| |||| ||||| |||||    
T  23128728 gacacgctgacaccaataataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtc 23128651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 49107799 - 49107887
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtg 115  Q
    ||||||||| | ||||||| |||||||  |||||||||||||||||| | |||||| ||||| |||||| | ||| ||||||||||||||    
T  49107799 acgacacggactctgacacaccgacaccgctaataatttgagaaaac-acataattgagtgtgattatatgtgtcggtgtcgtgttagtg 49107887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 22602791 - 22602707
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||| |||||||||||||||||||    ||| |||||||||||  | ||||||||||||||||||| | ||| |||||||||    
T  22602791 acgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 26329468 - 26329364
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcaga 120  Q
    |||| ||||||| | ||||||||||||||||    ||||||||||||||||  | | ||||||||||||||||| | ||| | |||||||  ||||||||    
T  26329468 tggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcaga 26329369  T
Q  121 cacga 125  Q
    |||||    
T  26329368 cacga 26329364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 43249973 - 43250041
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    ||||||| |||||||||||||||||   ||||||||||||||||  | ||||| |||||||||||||||    
T  43249973 gacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataag 43250041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 29787454 - 29787383
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    |||||| |||||| || | ||||||||||||  |||||||||||||||||  | ||||||||||||||||||    
T  29787454 ggatacaacacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 5835235 - 5835293
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| |||||||||| ||||||| ||||||||||  | |||||||||||||||||||    
T  5835235 cactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattata 5835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 19206028 - 19206122
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcaga 120  Q
    ||||||||| |||  ||||||||||||  |||||||||||||||||  | |||||||| | |||||||| | ||| ||||| |||| ||||||||    
T  19206028 acgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgtcaga 19206122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 21880159 - 21880268
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    ||||||||||||||||| || ||||||||||||||||| ||| ||| ||||||           ||||||| |||||| ||| |||| ||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacatgtccgacaccaggacacgcctaat 21880247  T
Q  155 ccaaggagcgtccgtgcttca 175  Q
    || || || ||||||||||||    
T  21880248 ccgagaagtgtccgtgcttca 21880268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 24105656 - 24105722
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| |||||||||||||||||  |||||||||||| |||| |  || ||||||||||||||    
T  24105656 acgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaatta 24105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 28155563 - 28155629
Alignment:
Q  41 acacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||  ||||||||||||||||| || ||||||| ||||||||| ||| ||| ||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 5548673 - 5548738
Alignment:
Q  45 gccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||  || ||||||||||||||  | ||||||||||||||||||| | |||||||||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 11061166 - 11061077
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||| ||||||||||||| ||||||||| |||||||  |||||||||||| ||||  | |||||| ||| |||||| ||| ||| |||||    
T  11061166 acatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 28401121 - 28401166
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaa 71  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||    
T  28401121 acgacacgggcaccaacacgtcgacactactaataatttgagaaaa 28401166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 11272660 - 11272569
Alignment:
Q  35 gcactgacacgccgacactactaataatttgagaaaacta--tataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacg 124  Q
    ||||||| |||||||||| ||| ||||||||| ||||  |  |||||||||||||||||| ||| ||| |||||||||  ||||| ||||||    
T  11272660 gcactgagacgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 15902800 - 15902928
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | |||||||| |||||||| | ||||||||||| ||||  | |||||| |||||||||||| | ||| |||| ||||  || || |||||||    
T  15902800 acgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacga 15902899  T
Q  126 tacatgttcgataccaagacacgcctaat 154  Q
     |||||  ||| |||| ||||||| ||||    
T  15902900 cacatgcccgagaccaggacacgcttaat 15902928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 21141063 - 21140995
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| | | |||||| |||||| ||||||||||| ||||||  |||||||||||||| ||||||    
T  21141063 acgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattata 21140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 30813800 - 30813856
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||| || |||||| | ||||||||||||||||| || |||||||||||||||||    
T  30813800 cactgatactccgacattgctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 35861952 - 35862024
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    |||| |||||||||||| ||||||||||||| ||||  | |||||||| ||||||| |||| ||| |||||||    
T  35861952 cactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 7758317 - 7758384
Alignment:
Q  43 acgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||| ||||| ||||||||||| |||||| ||||||||||||| |||||||  | ||| |||||||||    
T  7758317 acgctgacaccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgt 7758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 20549779 - 20549850
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||  |||||||||||||||||  |  |||||||||||||||||| | ||| ||||||    
T  20549779 cactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 22484004 - 22484071
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| | |||||||||||||||||  |||||||||| |||||| |  |||||||||| ||||||||    
T  22484004 cgacacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattata 22484071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 2034419 - 2034501
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    |||||||||  ||| ||||| |||||| |||||||||||||||| |  |||||||| ||||||  |||| | |||||||||||    
T  2034419 acgacacggatacttacacgtcgacaccactaataatttgagaatatcatataatttagtgtatatatatgtgtcagtgtcgt 2034501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 11722179 - 11722121
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcag 84  Q
    ||||||||| |||||||||||||||||  |||| ||||||||||||  | |||||||||    
T  11722179 acgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 26733282 - 26733348
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| |||||||||| ||||||  |||||||||||| ||||  | |||||||||| ||||||    
T  26733282 acgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 30516428 - 30516374
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    |||||||||| ||||||||  |||||||||||||||  |||||||||| ||||||    
T  30516428 cactgacacgtcgacactaacaataatttgagaaaatgatataattcaatgtaat 30516374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 33994266 - 33994328
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||||||||| |||||| | | ||| ||||||||||||||||||||| || |||| ||||    
T  33994266 gtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttca 33994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 7328757 - 7328688
Alignment:
Q  41 acacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||| ||| ||| |||||||||||||||||  | |||||| |||||||||||| | ||| |||||||||    
T  7328757 acacgtcgatactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 11665508 - 11665451
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    |||||||| ||||| ||||||||||||| ||||  | |||||||||| ||||||||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataag 11665451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 19992008 - 19992061
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    |||||||||||||||||  | ||| ||||||||||||||||| ||| |||||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 23191879 - 23191940
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||| |||||| ||||||||||  |||||||||||||||||  | ||| |||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaatta 23191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 25481893 - 25481946
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||||||||  |||||||||||| ||||  | |||||||||||||||||    
T  25481893 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 1433432 - 1433516
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| || ||||||||||||||   ||||||||||||||||  | || |||  ||||||||||| | ||| |||||||||    
T  1433432 acgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgt 1433516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 5307304 - 5307372
Alignment:
Q  107 gtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||| ||||||| ||| |||| |||| ||| || | |||||||||||||||||||| || |||||||||    
T  5307304 gtgtcagtgtcatacaagatagatgtgcgacactaggacacgcctaatccaaggagtgtacgtgcttca 5307372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 8842314 - 8842282
Alignment:
Q  143 gacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||||||||||||| ||||||||||||    
T  8842314 gacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 9778589 - 9778621
Alignment:
Q  143 gacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||||||||||||| ||||||||||||    
T  9778589 gacacgcctaatccaaggagtgtccgtgcttca 9778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 10377485 - 10377553
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||  |||| || |||||||||  ||||||| | ||||||  |||||||||||||||||||||    
T  10377485 acgacacggatactggcaggccgacactgttaataatataagaaaatcatataattcagtgtaattata 10377553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 11072290 - 11072379
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatg 131  Q
    |||||||||||||   ||||||||||| |||| ||||||||||| | |||||||  | ||| |||||||||  || || |||||||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaatatataattcaatataattat--gtgtcggtgtcgtgtcggtatctgacacgatacatg 11072379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 21560531 - 21560587
Alignment:
Q  76 ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgt 132  Q
    ||||||||||||||||| ||| ||| ||||||| |  |||||| |||||||||||||    
T  21560531 ataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgt 21560587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 25822647 - 25822715
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    ||||||||||||| ||||||||||||| ||||    | ||||||||||||||| ||| ||| |||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgt 25822715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 39698524 - 39698668
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacat 130  Q
    |||| ||||||||||| |||||  |||||||||||| ||||  | ||||||||||||||||| ||| |||||||||||||  ||||| ||||||| |  |    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgt 39698623  T
Q  131 gttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     | ||| ||| ||||||||||||||| ||||| ||||||||||||    
T  39698624 atccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 39698668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 21522728 - 21522873
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||||||||||  |||||||||| | ||||  | ||||||||||||||||| ||  ||| |||||||||  ||||| |||||||    
T  21522728 acgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21522827  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgc 171  Q
     || ||| ||  |||  |||||||||||||||| ||| ||||||||    
T  21522828 cacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21522873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 21533294 - 21533439
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||||||||||  |||||||||| | ||||  | ||||||||||||||||| ||  ||| |||||||||  ||||| |||||||    
T  21533294 acgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacga 21533393  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgc 171  Q
     || ||| ||  |||  |||||||||||||||| ||| ||||||||    
T  21533394 cacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 19579675 - 19579828
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagac 121  Q
    |||||| |||||| |||||| ||||||||||  |||||||||||||||||  | |||||| |||| ||||| ||| ||| ||||||||| |||||| |||    
T  19579675 ggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggac 19579774  T
Q  122 acgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||| | ||||   | |||  |||||||||||||| ||||| || |||| ||||    
T  19579775 acgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttca 19579828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 6326378 - 6326297
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| ||||||||||||||||   ||| ||||||||||||| || ||||||||||||||||| ||| ||||| ||||    
T  6326378 acgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtcagcgtcg 6326297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 7677703 - 7677832
Alignment:
Q  46 ccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagac 145  Q
    |||||||  |||||||||||| ||||  | ||||||||||| ||||| ||| ||| |||||||||  ||||| ||||||  |||||| ||| |||  |||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggac 7677802  T
Q  146 acgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||||||| ||||| ||| ||||||||    
T  7677803 acgcctaatccgaggagagtcggtgcttca 7677832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 21542008 - 21542153
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | || ||||| |||||||| ||||||||||| | || |  | ||||||||||||||||| ||| ||| |||||||||  ||||| |||||||    
T  21542008 acgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 21542107  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgc 171  Q
     || ||| ||| |||  |||||||| ||||||||||  ||||||||    
T  21542108 cacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgc 21542153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 15410529 - 15410465
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    ||||||||| |||||||||||||||||  |||||||||| |||||| ||||| ||||||||||||    
T  15410529 acgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaat 15410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 3966491 - 3966578
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    |||||||| ||||||||  |||||||||||||||||  | | ||||||||||||||||| | ||| ||||||||| |||||| |||||    
T  3966491 cactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 21191137 - 21191056
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||| ||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||    
T  21191137 acgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 22013392 - 22013461
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataa 95  Q
    ||||||||| |||||||||||||||||  |||||||||||  |||| || |||||| |||||||||||||    
T  22013392 acgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 6035471 - 6035558
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacg 124  Q
    |||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||   ||| |||||||||  ||| ||||||||    
T  6035471 cactgacacgccgacaccgctaataatttgag-aaataatataattcagtgtaattatatttgtcggtgtcgtgtcggtgacagacacg 6035558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 175
Target Start/End: Original strand, 6401477 - 6401625
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgat 126  Q
    |||||||| ||| ||||||||||||| |||||   ||| ||||||  | | ||| ||||||||||||| | ||| ||||||||| |||||| |||||||     
T  6401477 cgacacggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgac 6401576  T
Q  127 acatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || |||  || ||   || |||||| |||||||||| ||||||||||||    
T  6401577 acgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttca 6401625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 32630803 - 32630735
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||| |||||   |||||||||||||||| ||||||||||| |||||||||| | ||||||||||    
T  32630803 tgacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 43001780 - 43001844
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| |||||||| | ||||||| |||||||||||| |||| || |||||||||||||||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 6247610 - 6247681
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||    
T  6247610 cactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 41995444 - 41995515
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||||||||| | ||||||||||||||||| |||||||||| || ||||  | |||||||| ||||||||    
T  41995444 tggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 27932229 - 27932279
Alignment:
Q  42 cacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||||||||  ||||||||||||||||| || |||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 7997237 - 7997177
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    |||||||||||| ||||   ||||||||||||||||  ||||||| |||||||||||||||    
T  7997237 cactgacacgccaacacggataataatttgagaaaatgatataatacagtgtaattataag 7997177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 14674249 - 14674313
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||  | |||||| ||||||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 22423893 - 22423825
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||  |||||||| | ||||||||||||||||||||||||  | |||||||| | ||||||||    
T  22423893 acgacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattata 22423825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 25863212 - 25863252
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataag 96  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataag 25863252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 28588742 - 28588674
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||   ||||||||||||||||  | ||||||||||||||||||| | ||| ||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 36838550 - 36838606
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgtt 111  Q
    ||||||||||||||||| || |||||| |||||||||||| | ||| ||||||||||    
T  36838550 ctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 5873596 - 5873549
Alignment:
Q  24 atacgacacgggcactgacacgccgacactactaataatttgagaaaa 71  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||||||    
T  5873596 atacgacacggacactgacatgccgacacctctaataatttgagaaaa 5873549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 11685927 - 11686065
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    |||||||| ||||||||  ||||||||||||||||     |||||| |||||||||||| | ||| ||||||| |  ||||| ||||||| || ||| |     
T  11685927 cactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtcca 11686025  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | |||||| |||| ||||||  ||||| ||||||||||||    
T  11686026 aaaccaaggcacggctaatcggaggagtgtccgtgcttca 11686065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 15382455 - 15382588
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttg--agaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    ||||||||| || ||||||||||||||  |||||||||||  | ||||  |||||||||||| |||||| ||| ||| ||||||     ||||  |||||    
T  15382455 acgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcg-----gtgttggacac 15382549  T
Q  124 gatacatgttcgataccaagacacgcctaatccaaggag 162  Q
    || |||||| ||| |||  |||||||||||||| |||||    
T  15382550 gacacatgtccgacaccgggacacgcctaatccgaggag 15382588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 16203874 - 16203795
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| |||| ||| ||||||||| |||||||||||||||||    |||||| |||||||||||| | ||| ||||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcg 16203795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 30098334 - 30098453
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatc 155  Q
    ||||||||||||||||  | |||||||| ||||||||||   ||| || ||| || |||||| ||||||| || |||  || |||| ||||| |||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatc 30098433  T
Q  156 caaggagcgtccgtgcttca 175  Q
    | ||||  ||||||||||||    
T  30098434 cgaggaatgtccgtgcttca 30098453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 36642843 - 36642744
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||||||||||||||   ||||||||||| |||   | ||| || ||||||| |||||| ||| ||||| |||| ||||| |||||||    
T  36642843 acgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacga 36642744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 9449448 - 9449510
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaa 89  Q
    |||||||| ||||| ||||||||||| | ||||||||||||||||  | |||||||| |||||    
T  9449448 cgacacggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaa 9449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 14574116 - 14574062
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||||| | |||||||||||  |||  |||||||||||||||||||||    
T  14574116 gacacgccgacacgagtaataatttgatgaaatgatataattcagtgtaattata 14574062  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 27144451 - 27144509
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||||  ||||||||||||| |||  | |||||| ||||||||||||    
T  27144451 cactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattata 27144509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 31084311 - 31084385
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||||||  |||||||||||| ||||  | |||||||| |||||||| ||| |||  ||||||||    
T  31084311 cactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgt 31084385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 33178014 - 33178084
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||||||| ||||||||||| | ||||  | |||||| |||||||||| ||| ||| ||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 35017029 - 35017083
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||| || ||||||||||||||||||  | |||||| ||||||||||||    
T  35017029 gacacgccgaaaccactaataatttgagaaaatcacataatttagtgtaattata 35017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 37328925 - 37328778
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| |||||| || |||||||  | |||||||||  ||||  | | ||||||||||||||| | | ||| |||||||||  ||||| |||||||    
T  37328925 acgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacga 37328826  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | |  || |||||||  || |||| |||||| ||||| ||||||||||||    
T  37328825 tgc--gtccgataccgggatacgcttaatccgaggagtgtccgtgcttca 37328778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 39205872 - 39205926
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| ||||||| |||||||||||||||||  ||||||||  |||||||||||    
T  39205872 gacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattata 39205926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 2419865 - 2419983
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac-gatacatgttcgataccaagacacgcctaat 154  Q
    |||||||||||||||| || | ||||||||||||| ||  | ||||||| |||||| ||||||||||| ||| | ||| |||  ||  ||||| ||||||    
T  2419865 taataatttgagaaaattacacaattcagtgtaatcat--gtgtcagtgccgtgttggtgtcagacaccgatgcgtgtccgaccccgggacacacctaat 2419962  T
Q  155 ccaaggagcgtccgtgcttca 175  Q
    || | ||| ||||||||||||    
T  2419963 ccgatgagtgtccgtgcttca 2419983  T

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Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 6770523 - 6770588
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattat 93  Q
    ||||||| ||||||||| | ||||| ||||||||||| ||||||  | ||||||||||||| ||||    
T  6770523 gacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtacttat 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 19453087 - 19452998
Alignment:
Q  86 gtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||||| | ||| ||||||||| | |||| ||||||| ||||||   | ||  ||| |||||| |||||||||||||||||||||||    
T  19453087 gtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatacgccttatccaaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 19552624 - 19552530
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagaca 122  Q
    ||||||||| |||||||||||||||||   ||||||||||| ||||  | |||||| ||||||  |||||| |||  ||||||||  ||||||||||    
T  19552624 acgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcgtgtcggtgtcagaca 19552530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 19820475 - 19820430
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaa 71  Q
    ||||||||| ||||||||| |||||||  |||||||||||||||||    
T  19820475 acgacacggacactgacactccgacaccgctaataatttgagaaaa 19820430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 13287480 - 13287396
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| |||| ||||| ||||||   ||||||||||| ||||  | |||||||||||||| || ||| ||| |||||||||    
T  13287480 acgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgt 13287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 38464431 - 38464367
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtg 104  Q
    |||| |||||||| ||||||||||||||||||  | || ||||| || ||||||||| |||||||    
T  38464431 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattataagtgtcagtg 38464367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 40000623 - 40000555
Alignment:
Q  19 attggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgt 87  Q
    ||||| |||||||||| |||||||| | |||||||  ||||||||||| ||||  | ||||||||||||    
T  40000623 attgggtacgacacggacactgacatgtcgacactcttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 92790 - 92938
Alignment:
Q  31 acgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgtt----agtgtcagacacgat 126  Q
    |||| |||||||||||||||||  ||||||||||||||||| || ||||||||||||||||| ||| |||||| | |||||     ||||| |||||||     
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgttggtgggtgtcggacacgac 92889  T
Q  127 acatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||  || |||  |||||||||||||| ||||| ||||||||||||    
T  92890 acatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttca 92938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 9828036 - 9828171
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    ||||||||||||| ||||||||||||| ||||  | |||||||||||||||| || | ||| |||||||||  ||||||||||||| || ||| ||| ||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacac 9828135  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  |||||| ||||||| ||||| ||||||||||||    
T  9828136 cgggacacgtctaatccgaggagtgtccgtgcttca 9828171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 6612252 - 6612116
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| || ||||||||||| ||   ||||||||||| |||| || ||||||||||||||||| ||| ||| |||||||||   |||| |||||||    
T  6612252 acgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacga 6612153  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggag 162  Q
    ||  ||| ||| |||| ||||||||||||||||||||    
T  6612152 tatgtgtccgacaccaggacacgcctaatccaaggag 6612116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 47989476 - 47989624
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | ||||||||||||||||| | ||||||||| | ||||  | ||||||||||||||||| ||| ||| |||||||||  ||||| |||||||    
T  47989476 acgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacga 47989574  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     ||||||  || | |  |||||||||||||| ||||| ||||||||||||    
T  47989575 cacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttca 47989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 1486794 - 1486647
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagac 121  Q
    |||||||||||||  |||||||||| |||||  |||||||||||| ||||  | ||||||||||||||||||||| ||| |||||      ||||| |||    
T  1486794 ggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc------gtgtcggac 1486701  T
Q  122 acgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||| || ||| ||| |||  |||||||||||||| ||||| ||| ||||||||    
T  1486700 acgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttca 1486647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 3490461 - 3490405
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  3490461 cactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaatta 3490405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 25361881 - 25361963
Alignment:
Q  43 acgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||||||| ||| ||||||||||||||  | ||||||||||||||||||| | |||||||||||||  ||||| |||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacga 25361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 398846 - 398778
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||  | |||||||||||||||||||    
T  398846 acgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 5376581 - 5376497
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| |||| ||||||||||||  |||||||||| ||||||  | ||||||||||||||||| ||| ||| |||||||||    
T  5376581 acgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgt 5376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 7918292 - 7918208
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||| | || |||||||| ||||  ||||||||||||||||||  | ||||||||||||||||||| | |||||||||||||    
T  7918292 acgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 10572660 - 10572572
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacg 124  Q
    ||||||||||||||||| ||||||||||||||||||  | ||||||| ||||||||| | | ||| |||| ||||| ||||||| ||||    
T  10572660 cactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgtcaggcacg 10572572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 34298414 - 34298482
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||  |||||||| ||||||| ||||||||||||||||||  | |||||||||||||||||||    
T  34298414 acgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 9629981 - 9629834
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||| || ||| |||||  ||||||  |||||||||||| ||||  |||||||||||||| |||||||| ||| |||||||||   |||| |||||||    
T  9629981 acgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacga 9629882  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgctt 173  Q
     |||||| ||| |||  |||||| ||  |||||| || ||||||||||    
T  9629881 cacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 46348462 - 46348383
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||  |||||||| |||||||||| ||| ||| ||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 46348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 21038090 - 21038160
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||||||| |||||| || ||||||||||||||| ||| |||||||||||||||  ||||| |||||||    
T  21038090 ctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacacga 21038160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 31015021 - 31015087
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||  | |||||||||||||||||    
T  31015021 acgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 36878449 - 36878507
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||||  |||||||||||||||||  | |||||||||||||||||||    
T  36878449 cactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 5927421 - 5927340
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||||||  ||||| |||||||||||| ||||  |||||||| | |||||||| ||| ||||||||||    
T  5927421 acgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 5944250 - 5944410
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaact--atataattcagtgtaattataagcgtcagtgtcgtgttagt 114  Q
    |||| ||| ||||||| | ||||||||||||| |||  |||||||||||| ||||    | ||||||||||||||||||||| ||| |||||||||   |    
T  5944250 acatcggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgat 5944349  T
Q  115 gtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | | ||||| | |||||| ||| |||  || ||||||||||| ||||| || |||||||||    
T  5944350 gacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttca 5944410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 6427449 - 6427591
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactat---ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgt 132  Q
    |||||||| |||||||| ||||||||||||| ||||  ||   |||||||| ||||| || ||| |||||||||||||  | ||| ||||||| || |||    
T  6427449 cactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgt 6427548  T
Q  133 tcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     ||| |||  |||||||||||||  | ||| ||||||||||||    
T  6427549 ccgacaccgggacacgcctaatctgatgagtgtccgtgcttca 6427591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 20157431 - 20157347
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||||||||  ||||||  |||||||| ||||||||  | ||||||||||||||| ||| | ||| |||||||||    
T  20157431 acgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgt 20157347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 39130835 - 39130767
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||| ||||||| ||||||||| |||||| ||||||||| |||||||||||| | ||| ||||||    
T  39130835 tgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcg 39130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 609529 - 609482
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattca 83  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||    
T  609529 cactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 2896199 - 2896140
Alignment:
Q  29 acacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgta 88  Q
    |||||| |||||||||||||||||  |||||||||||||||||  | |||||||||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 22881687 - 22881616
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||||| ||||||||||||| ||||  | |||||| |||||||||| ||| ||| ||||||    
T  22881687 cactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 37598820 - 37598890
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||||| ||||||||||||| ||||  | | ||||||||||||||||||| ||| ||||||    
T  37598820 cactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcg 37598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 49872844 - 49872883
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  49872844 ctaatcatttgagaaaactatataattcagtgtaattata 49872883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 17754287 - 17754373
Alignment:
Q  24 atacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| | | ||||||| |||||||  |||||||||||| |||| || |||||||||||||| |||| | |||||||| ||||    
T  17754287 atacgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgt 17754373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 19562692 - 19562634
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||||| |||||||||||||||||    ||| |||||||||||||||    
T  19562692 cactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattata 19562634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 24577253 - 24577183
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||| ||||| ||||||||||||| ||||  | ||||||||||||||||| ||| ||| |||||||||    
T  24577253 gacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 34712462 - 34712380
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||| || | |||| ||| |||| |||||||||||||||||  | |||||| |||||||||||| | |||||||||||||    
T  34712462 gacacggacattaacacaccgtcactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 38503300 - 38503366
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| |||| |||| |||||||  |||||||||||||||||  ||||| |||||||||||||||    
T  38503300 gacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattata 38503366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 41877551 - 41877470
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| | |||||  ||||||||||  ||||||||||||||||| || |||||| |||||||||| ||| ||| ||||||    
T  41877551 acgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 113289 - 113361
Alignment:
Q  38 ctgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||||||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||  |||||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 6427332 - 6427396
Alignment:
Q  30 cacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||| |||||||||||| ||||  |||||||||||||||||  | |||||||| ||||||||||    
T  6427332 cacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattata 6427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 19324548 - 19324608
Alignment:
Q  34 ggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||| ||| ||||||| || ||||||||||||||  | |||||||||||||||||||    
T  19324548 ggcactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 12443527 - 12443476
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaatt 91  Q
    |||||||||||||  |||||||||||||||||  | ||||||||||||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 31694741 - 31694642
Alignment:
Q  76 ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||| |||||| ||| ||| |||||||||  ||||| ||||| | |||| ||||| |||   ||||||||||||  ||||| ||||||||||||    
T  31694741 ataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttca 31694642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 44482240 - 44482307
Alignment:
Q  58 ataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||||||||  | ||||||||||||||||||| | ||| |||||||||  ||||| |||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacga 44482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 5898337 - 5898267
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||| ||||||||||  |||||||| ||| ||||  | ||||||||||||||||||| ||||| |||||    
T  5898337 cactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 8842785 - 8842727
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||||| ||| |||| |||||||||||||  |||||||| | ||||||||||    
T  8842785 cactgacacgccggcaccactagtaatttgagaaaaacatataatttaatgtaattata 8842727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 15641109 - 15641043
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| |||||||| ||||||||| |||||||||| ||||||  | || ||||||||||| ||||    
T  15641109 gacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaactata 15641043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 17831602 - 17831548
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    |||||||||||||||||  |||||||||||||||||  | || ||||||||||||    
T  17831602 cactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaat 17831548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 22515892 - 22515830
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||| ||||||| |||| | ||| ||| ||||||||||||||| ||||| ||||||||||||    
T  22515892 gtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttca 22515830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 28273159 - 28273089
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||||| || ||||| |||||| |||||| ||||  ||||||||||||||||||| ||| ||| |||||    
T  28273159 cactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 30847800 - 30847722
Alignment:
Q  27 cgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgt 105  Q
    |||||||||||| |||| || |||||| |||||||||||| ||||  | |||||||| |||||| ||| | ||||||||    
T  30847800 cgacacgggcaccgacatgctgacactgctaataatttgaaaaaatgacataattcaatgtaatcatatgtgtcagtgt 30847722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 40181871 - 40181917
Alignment:
Q  48 gacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 40258938 - 40258876
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||||||||||| || ||| ||| |||| |||||||||||||| ||||| |||| |||||||    
T  40258938 gtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttca 40258876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 42359527 - 42359449
Alignment:
Q  29 acacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||| ||||||||||| |||||  |||||||||||| ||||  | | ||||||||||||||| ||| ||| ||||||    
T  42359527 acacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 48450668 - 48450602
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| |||||||||||| ||||  |||||||||||| ||||  | |||||| ||||||||||    
T  48450668 acgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaatta 48450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 8010339 - 8010298
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataag 96  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  8010339 ctaataatttgaaaaaattatataattcagtataattataag 8010298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 9033094 - 9033021
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattat 93  Q
    |||||||  ||||| |||||||||| | |||| ||||||||||||| |||| | | ||||||||||||||||||    
T  9033094 tggatacatcacggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattat 9033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 9709798 - 9709879
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||| ||| ||||  |||||||||||||||||  | |||||||  |||||||||| | ||| ||||||    
T  9709798 acgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcg 9709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 13436451 - 13436504
Alignment:
Q  41 acacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||||| |||||||||| || |||  | |||||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattata 13436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 23636130 - 23636065
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatt 91  Q
    ||||||||| || ||||||||||| ||  | || |||||||||||| || ||||||||||||||||    
T  23636130 acgacacggacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaatt 23636065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 16927266 - 16927198
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| | |||||||||| || ||   |||||||||||| ||||  |||||||||||||||||||||    
T  16927266 acgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 21378551 - 21378635
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgt 105  Q
    |||| ||||||||| ||  ||||| |||||||  ||||||| |||| |||| || ||||||||||||||||| ||| ||| ||||    
T  21378551 tggacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 26830641 - 26830701
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgctt 173  Q
    ||||||||||| | || |||||||||||  |||||||||||||  ||||| ||||||||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 27471637 - 27471581
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| |||| ||  |||||||||||||||||  | |||||||||||||||||    
T  27471637 cactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaatta 27471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 29144429 - 29144373
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||| ||||||||||  |||||||||||| |||| || ||||| |||||||||||    
T  29144429 cactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaatta 29144373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 37055949 - 37055853
Alignment:
Q  14 cgaacattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||| ||| | ||||| | |||||| ||  ||| ||| ||||||||||||||||| || |||||| |||||||||| |||  ||||| ||||||    
T  37055949 cgaacatcggacatgacacagacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaattacaagtatcagtatcgtgt 37055853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 48415701 - 48415669
Alignment:
Q  143 gacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||||||||||||| ||||||||||||    
T  48415701 gacacgcctaatccaaggagtgtccgtgcttca 48415669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 3930 - 3781
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| | |||||| | ||||||||   ||||||||| | ||||  | ||||||||||||||||| ||| |||||||||||||| ||||| |||||||    
T  3930 acgacacagacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacga 3831  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     |||||| ||| | | ||||||||||||||| ||||| |||| |||||||    
T  3830 cacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttca 3781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 12696302 - 12696386
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| |||||||||||||||||  |||||||||||| |||| || ||||||||||||||||| ||| |||||||||||||    
T  12696302 acgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgt 12696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 8365600 - 8365451
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||||| ||||||||||||||||| ||||||||||||| || |  | ||||||| ||||||||| ||| ||| |||||||||  || || |||||||    
T  8365600 acgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacga 8365501  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| ||   |||||||||||||| |||||  |||||||||||    
T  8365500 cacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttca 8365451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 16766675 - 16766824
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||| || |||||||||||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| ||| |||||||||  ||||| ||||| |    
T  16766675 acgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaa 16766774  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
     || ||| ||| |||  |||||||||||||| | ||  ||||||||||||    
T  16766775 cacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttca 16766824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 31384926 - 31385046
Alignment:
Q  54 actaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaa 153  Q
    ||||||||||||| ||||  | ||||||||||||||||| ||| |||||||||||| ||||||  ||||||| || ||| | | |||  |||||||||||    
T  31384926 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtg-tagtgttggacacgacacgtgtcctacaccgggacacgcctaa 31385024  T
Q  154 tccaaggagcgtccgtgcttca 175  Q
    ||||||||| ||||||||||||    
T  31385025 tccaaggagtgtccgtgcttca 31385046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 7996449 - 7996378
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||| ||||||    
T  7996449 cactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 8022352 - 8022423
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||| ||||||    
T  8022352 cactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 3398597 - 3398681
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgtt 111  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||  |||||||||||||||||||||||  || ||||||||||    
T  3398597 acgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgtt 3398681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 10339197 - 10339057
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgt-aattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttc 134  Q
    |||||||||||||||||  | | |||||||||||||  | |||||||||||| ||||||| | ||||||| |||||  ||||| ||||||| |||||| |    
T  10339197 cactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtcc 10339098  T
Q  135 gataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    || ||   |||||||||||||  ||||| ||||||||||||    
T  10339097 gacactgggacacgcctaatcggaggagtgtccgtgcttca 10339057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 17341745 - 17341669
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcag 102  Q
    |||||||||||||||||||||||||||   ||||||||||| ||||  | ||||||||||||||||||||| |||||    
T  17341745 acgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtcag 17341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 34595112 - 34595193
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| || |||||||||||||| ||||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||    
T  34595112 acgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 7938094 - 7938174
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||| || |||||||||||||||||  |||||||||||| ||||  |||||||| |||||||||||||| ||| |||||    
T  7938094 acgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 9027156 - 9027240
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| |||||||||||||||||  |||||||||||||| ||  | ||||||| ||||||||||| | ||| |||||||||    
T  9027156 acgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 9658857 - 9658925
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||| |||||||||||||||||  |||||||||| ||||||  | |||||||||||||||||||    
T  9658857 acgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 10770755 - 10770671
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||| || |||||||||||| |||| ||||||||||||| ||||  | ||||||||||||||||| ||| ||| |||||||||    
T  10770755 acgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 18367828 - 18367963
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    |||||||||||||  |||||  ||| ||||||  | | ||| ||||||||||||| | ||| |||||||||  ||||||||||||| ||||||  || ||    
T  18367828 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacac 18367927  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
       ||||||||| |||||||||| ||||||||||||    
T  18367928 ggggacacgccttatccaaggagtgtccgtgcttca 18367963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 7977900 - 7977830
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||||  |||||||||||| |||| || ||||||||||||||||| ||| ||| ||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 8777054 - 8776988
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||  | | |||||||||||||||    
T  8777054 acgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 19040341 - 19040411
Alignment:
Q  37 actgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||||  |||||||||||||||||  | ||||||||||||||||||| | ||| ||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 19044440 - 19044510
Alignment:
Q  24 atacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||| || ||||||||||||||||| |||||||||||||||| |  | |||||||||||| ||||||    
T  19044440 atacgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattata 19044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 9107451 - 9107354
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    ||||||||| |||| ||||||||||||  |||||||||||| ||||  | | ||||||||||||||| ||| ||| |||||||||  ||||| |||||    
T  9107451 acgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 9107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 13851705 - 13851782
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| | ||||||||| |||||||||| ||||||  |||||||||||||||||  |  ||||||||||||||||||    
T  13851705 acattgaacacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattata 13851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 21395392 - 21395292
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagac 121  Q
    ||||| |||| || ||| |||||||| ||||  ||||||||||||||||| || |||||| |||||||||| ||| ||| ||||||||| |||||| |||    
T  21395392 ggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaa-tacataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggac 21395294  T
Q  122 ac 123  Q
    ||    
T  21395293 ac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 5000705 - 5000558
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgata 127  Q
    |||||||  ||||||||| ||||||  ||||||||| |||||||  | || ||||||| ||||| ||   ||||||||| |||  ||||||||||||| |    
T  5000705 gacacggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 5000606  T
Q  128 catgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||| | ||| |||| |||||| ||||||| | ||| || |||||||||    
T  5000605 catatccgacaccaggacacgtctaatccgaagagtgttcgtgcttca 5000558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 7265664 - 7265593
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||||||||| ||||  |||||||||||||||||  | ||||||||||||||||||| | ||| ||||||    
T  7265664 cactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 16833286 - 16833365
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgt 105  Q
    ||||||| | ||||||||||||||||| ||||||||||||| ||||  | ||| ||||||||||||| ||| ||| ||||    
T  16833286 acgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 677825 - 677899
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||||||||||||  ||||||||||||||||  |||||||  |||||| ||||| ||||  |||||||||    
T  677825 cactgacacgccgacactgttaataatttgagaaaatcatataatatagtgtatttatatgcgttggtgtcgtgt 677899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 9025553 - 9025491
Alignment:
Q  48 gacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||||| |||||||||||||||||  | ||||||||||||||||||| | ||| |||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 9195814 - 9195736
Alignment:
Q  47 cgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    ||||||| |||||||||||||||||  | |||||| |||||||||||| | ||| |||||||||  ||||| |||||||    
T  9195814 cgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacga 9195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 26562681 - 26562735
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||| |||| ||||||||||||  | |||||||||||||||||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattata 26562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 8389530 - 8389485
Alignment:
Q  49 acactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  8389530 acactactaataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 34073433 - 34073344
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    |||| ||||||||| |||||||| ||| |||   |||||||||||||||||    ||||||||||||||||||| | ||| |||||||||    
T  34073433 tggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgt 34073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 6389721 - 6389785
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    ||||||||| |||| ||||||||||||   ||||||||||||||||  |||||||| ||||||||    
T  6389721 acgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaat 6389785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 17302544 - 17302632
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaact-atataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    ||||||||||| ||||| ||||||||||||| |||| | | |||||||| |||||||| ||| |||| |||||||| ||| | ||||||    
T  17302544 cactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgtcagtattagacac 17302632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 17841668 - 17841604
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||  | |||||| ||||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 21924999 - 21924935
Alignment:
Q  43 acgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||| ||||||||||||||| |  | ||||||||||||||||||| | ||| ||||||    
T  21924999 acgccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 34290148 - 34290063
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    |||||||| |||||||| |||||||||||| || ||  | ||||||||||||||||||  | ||| ||||||||| |||||| |||||    
T  34290148 cactgacatgccgacacaactaataatttgcgagaatcacataattcagtgtaattat--gtgtcggtgtcgtgtcagtgtccgacac 34290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 7801227 - 7801156
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||| |||||||||||| ||||||||||||| ||||  | ||||||||| ||||||| ||| ||| ||||||    
T  7801227 cactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 13364773 - 13364722
Alignment:
Q  39 tgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    ||||| ||||||||| || ||||||||||||||  |||||||||||||||||    
T  13364773 tgacatgccgacactgcttataatttgagaaaatcatataattcagtgtaat 13364722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 17435173 - 17435256
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgt 105  Q
    ||||||||||||| |||||| ||| |||||   |||||||||| | |||| || ||||||||||||||||| ||| || |||||    
T  17435173 ggatacgacacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgt 17435256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 28152079 - 28152157
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||| ||||||||||||||||   |||||||||||| ||||  | ||||||||||||||||| ||| ||| ||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcg 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 34197137 - 34197176
Alignment:
Q  74 atataattcagtgtaattataagcgtcagtgtcgtgttag 113  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  34197137 atataattcagtgtaattataagtgtcggtgtcgtgttag 34197176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 2153966 - 2153900
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| ||| ||||||||||||| |  |||||||| ||||||  |||||||| ||||||||||||    
T  2153966 gacacggacaccgacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattata 2153900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 5732596 - 5732510
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||| |||||| || |||||||||||||||||   ||||||||||||||||  | ||| || |||||||||||| | ||| ||||||    
T  5732596 tggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 7569219 - 7569181
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||| || |||||||||||||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 7723321 - 7723263
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||  |||||| |||||||||||||||||  |||||||||||  ||||||||    
T  7723321 cactgacacgtggacactgctaataatttgagaaaatcatataattcagcataattata 7723263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 9629356 - 9629442
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||| |||||||||  | ||||||||||||||  | |||||||||||||||  | |||||||| |||||||||| | ||| ||||||    
T  9629356 tggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 13360439 - 13360385
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||| |||||| |||| |||||||||||||  | |||||||||||||||||||    
T  13360439 gacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattata 13360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 17168534 - 17168480
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaat 90  Q
    |||||||||||| |||||  ||||||||||||||||  |||||||| ||||||||    
T  17168534 cactgacacgccaacactgataataatttgagaaaatgatataatttagtgtaat 17168480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 24833304 - 24833246
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||||||||||||||||||||||||| || ||||||    |||||| ||||||||||||    
T  24833304 cactgacacgccgacactactaataagttaagaaaatcgcataatttagtgtaattata 24833246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 32978904 - 32978842
Alignment:
Q  113 gtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||||| ||||||| |||||| ||| |||  |||||| ||||||||||||| ||||||||||||    
T  32978904 gtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 33001367 - 33001289
Alignment:
Q  29 acacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    |||||| || ||||||||||||||| |||||||||||| ||||  | |||||| | |||||||||| | ||| ||||||    
T  33001367 acacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 34895085 - 34895035
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||||||||||||| |||| ||||||||||||| ||| | |||||||||    
T  34895085 taataatttgagaaaattatacaattcagtgtaatcataggtgtcagtgtc 34895035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 426595 - 426514
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||||||||||||   ||||||||||| ||||  | |||||| | |||||||| ||| ||| ||||||    
T  426595 acgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcg 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 853928 - 853859
Alignment:
Q  38 ctgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||||||||| ||||||||||||| ||||  | |||||| |||| ||||| ||| ||| ||||||    
T  853928 ctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcg 853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 1532247 - 1532311
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagaca 122  Q
    |||||||||||| |||| || ||||||||||||||||||| | |   |||||||||| ||||||||||    
T  1532247 ctaataatttgataaaattacataattcagtgtaattatatgtg---gtgtcgtgttggtgtcagaca 1532311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 15489810 - 15489733
Alignment:
Q  29 acacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    |||||| |||| ||||| |||||| ||||||||||||| |||| || | |||||| |||||||| ||| ||| |||||    
T  15489810 acacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 20576685 - 20576612
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatac 128  Q
    ||||||||| ||||||| |  ||||||||||||||||||||| ||  |||||||||   |||||| ||||||||    
T  20576685 ctaataattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtcgatgtcaggcacgatac 20576612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 29220255 - 29220300
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtc 100  Q
    ||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  29220255 ctaataatttgagaaaattatgtaatacagtgtaattacaagcgtc 29220300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 1681746 - 1681802
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||| |||||||||||| ||||||||||||| ||||  |  ||||||||||||||||    
T  1681746 cactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaatta 1681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 7086773 - 7086841
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||| | ||| |||||| || |||| |||||||||||||||||  | |||||| ||||||||||||    
T  7086773 acgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattata 7086841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 9522898 - 9523018
Alignment:
Q  55 ctaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaat 154  Q
    |||||||||| | ||||  | ||||||||||||||||| ||| ||| |||| ||||  ||||| ||  ||| || ||| ||| ||| |||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T
Q  155 ccaaggagcgtccgtgcttca 175  Q
    ||||  ||| ||| |||||||    
T  9522998 ccaaatagcatccatgcttca 9523018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 10649372 - 10649404
Alignment:
Q  143 gacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |||||||||||||||||||| ||||||||||||    
T  10649372 gacacgcctaatccaaggagtgtccgtgcttca 10649404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 20518319 - 20518391
Alignment:
Q  22 ggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    ||||||||||| | ||||||||| |  |||| ||||| |||||||||||| || |||| ||||| ||||||||    
T  20518319 ggatacgacacagacactgacacactaacaccactaacaatttgagaaaattacataaatcagtataattata 20518391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 25038161 - 25038053
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgt 116  Q
    |||||| ||||||||| |  |||||||||  |||||   |||||||||||||||| || |||||| |||||||||| ||  ||| || | ||||| ||||    
T  25038161 acattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgt 25038062  T
Q  117 cagacacga 125  Q
    | |||||||    
T  25038061 ccgacacga 25038053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 32313391 - 32313479
Alignment:
Q  35 gcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac 123  Q
    |||||||||||||||||| | |||||| |||||||||  | || ||||| || ||||||| | ||  |||||||||  |||||||||||    
T  32313391 gcactgacacgccgacaccaataataagttgagaaaataacatgattcaatgcaattatatgtgtgggtgtcgtgtcggtgtcagacac 32313479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 13380 - 13522
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgata 127  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||  | ||||||||||| ||||| ||| ||| ||||||     ||||| ||||||| |    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg-----gtgtcggacacgaca 13474  T
Q  128 catgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  ||  || || | ||||| |||||||||||||| ||||||||||||    
T  13475 cgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttca 13522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 21947 - 21805
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgata 127  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||  | ||||||||||| ||||| ||| ||| ||||||     ||||| ||||||| |    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg-----gtgtcggacacgaca 21853  T
Q  128 catgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  ||  || || | ||||| |||||||||||||| ||||||||||||    
T  21852 cgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttca 21805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 175
Target Start/End: Original strand, 8644 - 8793
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacga 125  Q
    |||||| || |||||||||| ||||||| ||||||||||  |||||  | ||| |||||| |||||||||| ||| |||||||||   ||||||||  ||    
T  8644 acgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgtctatgtcagacgtga 8743  T
Q  126 tacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||| ||| |||||| ||||||||||| |||| || || |||| |||||||    
T  8744 tacgtgtccgatactaagacacgccttatccgagaagtgtccatgcttca 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 8002 - 8054
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||||||| ||||||||||||| ||||  ||||||| |||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 178900 - 178819
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactat-ataattcagtgtaattataagcgtcagtgtc 106  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||  || ||||||||||||||||| ||| |||||||||    
T  178900 acgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 192330 - 192264
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||| |||| |||||||||||||||||   |||||||||||||||| || ||||||| |||||||||    
T  192330 acgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 20150 - 20234
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| || ||||||||||||||  |||||||||||| ||||  | ||||||||||||||||| ||| |||||||||||||    
T  20150 acgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 20234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 9814 - 9679
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgatac 139  Q
    |||| |||||| | ||||||||||||||||||  |  |||||||||||||||||| | ||| |||||||||| ||||||||||||| || |||  || |     
T  9814 gacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacat 9715  T
Q  140 caagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  ||||||  |||||| ||||| ||||||||||||    
T  9714 cgggacacgtataatccgaggagtgtccgtgcttca 9679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 225349 - 225200
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacac-g 124  Q
    ||||||||| |||||||||||||||||   ||||||||||||||||  | ||||| || |||||||||||| ||| |||| |   | ||||| ||||| |    
T  225349 acgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtc-gtgttggtgtcgtgtcggacactg 225251  T
Q  125 atacatgttcgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    |  | ||||||| |||| |||||||||||| | ||||| ||||||||||||    
T  225250 acgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttca 225200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 8776 - 8857
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||  |||| ||| |||||||||| ||| ||| ||||||    
T  8776 acgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcg 8857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 53170 - 53303
Alignment:
Q  38 ctgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgat 137  Q
    |||||||||||| ||  | |||||||||||||||  | ||||||||||||||||||||| ||| ||| |||||  ||||| |||| || || ||| |||     
T  53170 ctgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgac 53269  T
Q  138 accaagacacgcctaatccaaggagcgtccgtgc 171  Q
    |||  ||||||  ||||||||| || ||||||||    
T  53270 accgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 90816 - 90889
Alignment:
Q  21 tggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattata 94  Q
    |||| ||||||| | ||||||||| || |||| | ||||||||||||||||  |||||||||||||||||||||    
T  90816 tggacacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattata 90889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 51791 - 51855
Alignment:
Q  28 gacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||  | |||||||||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 2956 - 3052
Alignment:
Q  76 ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcgataccaagacacgcctaatccaaggagcgtccgtgct 172  Q
    |||||| |||||||||| |||  ||||||||||||  || |||||||||| || ||||||| |||   ||||||||||||| ||||| |||||||||    
T  2956 ataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgct 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 56932 - 56984
Alignment:
Q  58 ataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||||||||  ||||||||||||||||| ||||| |||||||||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcgtgt 56984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 63746 - 63831
Alignment:
Q  22 ggatacgacacgggcactgacacgccga-cactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtc 106  Q
    ||||||||||||| || ||||||| | | |||  ||||||||||||||||| || ||||||||||| ||||| ||| ||| |||||    
T  63746 ggatacgacacggacaatgacacgtctaacaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 1011 - 1097
Alignment:
Q  24 atacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| | | ||||||| |||||||  |||||||||||| |||| || |||||||||||||| |||| | |||||||| ||||    
T  1011 atacgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgt 1097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 135395 - 135309
Alignment:
Q  24 atacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgt 110  Q
    ||||||||| | |||  |||| |||||||| |||||||||||||||||  | ||||||| ||||||||||| | ||| |||||||||    
T  135395 atacgacacagacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 71711 - 71852
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaact--atataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgtt 133  Q
    |||||||||||||||||  |||||||||||| ||||    | | |||||||||||||||  || |||||||||||||  ||||| ||||| | || |||     
T  71711 cactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtc 71810  T
Q  134 cgataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    ||| |||  |||||| ||||||| ||||| ||| ||||||||    
T  71811 cgacaccgggacacgactaatccgaggagtgtcggtgcttca 71852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 539 - 462
Alignment:
Q  30 cacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcg 107  Q
    ||||| |||||| ||||||||||| |||||||||||| ||||  | | ||||||||||||||| ||| ||| ||||||    
T  539 cacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 14522 - 14574
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||||||||| ||||||||||||| ||||  | |||||||||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 8706 - 8567
Alignment:
Q  36 cactgacacgccgacactactaataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgatacatgttcg 135  Q
    |||||||| |||||||| ||||||||||||| || |  | ||||||| || |||||| ||  ||| |||||||||  || || |||||||||| ||| ||    
T  8706 cactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccg 8607  T
Q  136 ataccaagacacgcctaatccaaggagcgtccgtgcttca 175  Q
    | ||    ||||||||||| | ||||| ||||||||||||    
T  8606 acactggtacacgcctaattcgaggagtgtccgtgcttca 8567  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 23539 - 23590
Alignment:
Q  76 ataattcagtgtaattataagcgtcagtgtcgtgttagtgtcagacacgata 127  Q
    ||||||||||||||||||||| ||||||||||| |  ||||| |||||||||    
T  23539 ataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgata 23590  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 46651 - 46726
Alignment:
Q  17 acattggatacgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||| ||| ||||||||| || ||||||||||||||   ||||||||||| ||||  | |||||||||||||||||    
T  46651 acatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 19554 - 19619
Alignment:
Q  26 acgacacgggcactgacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    ||||||| | |||||||||||||| || ||||||||||||| ||||  | |||||||||||||||||    
T  19554 acgacactgacactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaatta 19619  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7378 - 7322
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaattataag 96  Q
    ||||||||||||| ||||||||||||  ||||  | |||||| ||||||||||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataag 7322  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 33430 - 33378
Alignment:
Q  40 gacacgccgacactactaataatttgagaaaactatataattcagtgtaatta 92  Q
    |||||||||||||  |||||||||||| ||||  | |||||||||||||||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 68293 - 68241
Alignment:
Q  56 taataatttgagaaaactatataattcagtgtaattataagcgtcagtgtcgt 108  Q
    ||||||||||||||||  |||||||| ||| |||||||| | |||||||||||    
T  68293 taataatttgagaaaatcatataatttagtataattataggtgtcagtgtcgt 68241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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