View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14151_low_7 (Length: 549)
Name: NF14151_low_7
Description: NF14151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14151_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 23 - 529
Target Start/End: Original strand, 35138061 - 35138565
Alignment:
| Q |
23 |
tatgaaagaaagaaattgaaagaaatattttccattatacacaaataagttgatttcttaaaaataaattaatgatggtaagggtgataaactatgtttt |
122 |
Q |
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| T |
35138061 |
tatgaaagaaagaaattgaaagaaatattttccattatacacaaataagttgattttttaaaaataaactaatggtggtaagggtgaca--ctatgtttt |
35138158 |
T |
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| Q |
123 |
tgtttctatctttctccaaatatggaagactccatttatcttgagaaactaagaagaagatcctagttagtgtacaaatggatttgattnnnnnnnnnng |
222 |
Q |
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| T |
35138159 |
tgtttctatctttctccaaatatggaagactccattgatcttgaaaaactaagaagaagatcctagttagtgtacaaatggatttgattaaaaaaaaa-g |
35138257 |
T |
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| Q |
223 |
tttgcgaatgaatcaattgagatttaggtggacgttgacataataagttatatggatgaatggatctttcggcataaaaaatcaagtattatacaagtgt |
322 |
Q |
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| T |
35138258 |
tttacgaatgaatcaattgaaatttaggtggacgttgacagaataagttatatggatgaatggatctttcggcataaaaaatcaagtattatacaagtgt |
35138357 |
T |
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| Q |
323 |
tctatgccaatgacctttcaagcaaaaagtggtcattggttctacaagaaagcaacacatgattcagaaacgaatatcaagtgtggagagacaattaaga |
422 |
Q |
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| T |
35138358 |
tctatgccaatgacccttcaagcaaaaagtggtcattggttctacaagaaagcaacacatgattcagaaacgaatatcaagtgtggagagacaattaaga |
35138457 |
T |
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| Q |
423 |
ataaaggagaggcaactgagaggaatgaacgggagaaaatacaattgttgtgaattcggtgactctt-aattttacatcaatgaattttagcttctgatg |
521 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
35138458 |
ataaaggagaggcaactgagaggaatgaacgggagaaaatacaattgttgtgaattcggtgactcttggattttacatcaatgaattttagcttctgatg |
35138557 |
T |
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| Q |
522 |
gtaagtat |
529 |
Q |
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| T |
35138558 |
gtaagtat |
35138565 |
T |
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