View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14152_high_33 (Length: 358)
Name: NF14152_high_33
Description: NF14152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14152_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 2360582 - 2360926
Alignment:
| Q |
1 |
tacattacattaacaaataccacaaacaatttaaaagaaaaataaattaattagtgcttaatacattctcgccggtacaaaatttgcctgttaagaaggc |
100 |
Q |
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| T |
2360582 |
tacattacattaacaaataccacaaacaatttaaaagaaaaataaattaattagtgcttaatacattctcgccggtacaaaatttgcctgttaagaaggc |
2360681 |
T |
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| Q |
101 |
aacacaacaacgagaatcctaataataattatagttgttaattaatcacttaatta---ttattatataactaaactcacaaaattaaagagcaagaaca |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
2360682 |
aacacaacaacgagaatcctaataataattatagttgttaattaatcacttaattattattattatataactaaactcacaaaattaaagagcaagaaca |
2360781 |
T |
|
| Q |
198 |
gtagtatctgaagcaaataaatcatcaatatcttgaaaaaagtcttcatccttatgtgtctgcaagctttctaacccaaaatcgaaatactcaaaaccaa |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2360782 |
gtagtatctgaagcaaataaatcatcaatatcttgaaaaaagtcttcatccttatgtgtctgcaagctttctaacccaaaatcgaaatactcaaaaccaa |
2360881 |
T |
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| Q |
298 |
tatcaccatagaacatgctctctgagaatccattgaagttgtaaa |
342 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
2360882 |
tatcaccatataacatgctctctgagaatccattgaagttgtaaa |
2360926 |
T |
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