View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14152_high_47 (Length: 253)
Name: NF14152_high_47
Description: NF14152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14152_high_47 |
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Alignment Details
Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 39109381 - 39109458
Alignment:
| Q |
12 |
cataggtaatgatgcaaagtttgattctccgtttggaagacgaaaacttgtctatgctgatcacactgcttctggtcg |
89 |
Q |
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| T |
39109381 |
cataggtaattatgcaaagtttgattctccgtttggaagacgaaaacttgtctatgctgatcacactgcttctggtcg |
39109458 |
T |
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Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 8884419 - 8884346
Alignment:
| Q |
96 |
aagaatatacatacataagagaagcaaggaataatgttgatgaagaaaagcaacgtacaaaaacaatgaggaat |
169 |
Q |
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| T |
8884419 |
aagaatatacatacataagagaagcaaggaagaatgttgatgaagaaaagcaacgaacaaaaacaatgaggaat |
8884346 |
T |
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