View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14152_low_18 (Length: 431)
Name: NF14152_low_18
Description: NF14152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14152_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 16 - 415
Target Start/End: Original strand, 248576 - 248975
Alignment:
| Q |
16 |
atctcacattacttgaaaaccgaggttacgaacttacgagtaatttataaacacgcactcaattgaacaacgacttttaactaagccgcatttgtgaagt |
115 |
Q |
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| T |
248576 |
atctcacattacttgaaaaccgaggttacgaacttacgagtaatttataaacacgcactcaattgaacaacgacttttaactaagccgcatttgtgaagt |
248675 |
T |
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| Q |
116 |
gaagtttctataatatctaaagtggacaatacctcggaagaaattaaaatccaaatgaattaatttgagcataaggtagtattgatcatattttgaggtg |
215 |
Q |
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| T |
248676 |
gaagtttctataatatctaaagtggacaatacctcagaagaaattaaaatccaaatgaattaatttgagcataaggtagtattgatcatattttgaggtg |
248775 |
T |
|
| Q |
216 |
gcttgtaactaagagctcccaagctgtatacacataggttattctcttgttttaatatctgactacttcctgtgctcttcaagaaaggaacattgcaaga |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248776 |
gcttgtaactaagagctcccaagctgtatacacataggttattctcttgttttaatatctgactacttcctgtgctcttcaagaaaggaacattgcaaga |
248875 |
T |
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| Q |
316 |
ataagaagatgatgaagttcctatcaaggttgcttggcagagagacacaatctgtgaattaccatccatggcaattttacagttagttccatccactgat |
415 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248876 |
ataagaagatgatgaagttcctatcaagcttgcttggcagagagacacaatctgtgaattaccatccatggcaattttacagttagttccatccactgat |
248975 |
T |
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