View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14152_low_21 (Length: 405)
Name: NF14152_low_21
Description: NF14152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14152_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 14 - 388
Target Start/End: Original strand, 32192297 - 32192672
Alignment:
| Q |
14 |
agcaaaggcacggcacagacacactgcgcagagtattcataaggaggagggcatggttgacttggacagcttacaatggagttaccattcatatcgtttt |
113 |
Q |
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| T |
32192297 |
agcaatggcacggcacagacacactgcgcagaatattcataaggaggagggcatggttgacttggacagcttacaatggagttaccattcatatcgtttt |
32192396 |
T |
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| Q |
114 |
cacttttagatccacaaaattgaactaaggtgttgttatttgagcatataggattcccctgaagcctggaaaatagtactttttcaaaatgataatgtga |
213 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
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| T |
32192397 |
cacttttagatccacaaaattgaactaaggagttgttatttgagcatataggattcccctgaagcctggaaaatagtgatttttcaaaacgataatgtga |
32192496 |
T |
|
| Q |
214 |
caagct-tttaannnnnnnggaaccaaaataagatgaaataatcaacaagttttgatttatatcataaggatattaagcatagtttatttatctttttgg |
312 |
Q |
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|||| | || | ||||| || |||| | ||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32192497 |
caagttattcataaaaaatggaactaatataaaaggaaatgatcaacaattttttatttatatcataaggatattaagcaaagtttatttatctttttgg |
32192596 |
T |
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| Q |
313 |
tgcaccagggtattctcgactgggttccataaactaatccctcgaggtacaaggattcattcatgttggctaatct |
388 |
Q |
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||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32192597 |
tgcaccagggtattctccagtgggttccataaactaatccctcgaggcacaaggattcattcatgttggctaatct |
32192672 |
T |
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