View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14152_low_58 (Length: 243)
Name: NF14152_low_58
Description: NF14152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14152_low_58 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 227
Target Start/End: Complemental strand, 27756302 - 27756083
Alignment:
| Q |
8 |
tactaacacaactaatttctaatagttcattgtgtagacatacttacacagaagcaacattccgtgcttgccgagaaactagtgaatttgctaaaacaaa |
107 |
Q |
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| T |
27756302 |
tactaacacaactaatttctaagagttcattgtgtagacatacttacacagaagcaacattccgtgcttgccgagaaactagtgaatttgctaaaacaaa |
27756203 |
T |
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| Q |
108 |
tgctccaactccaagatccatctgcaaggcagaatttatttctaatctcaacagaacaatcaaagtattgactatacatcttgttagcaacataaattaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27756202 |
tgctccaactccaagatccatctgcaaggcagaagtaatttctaatctcaacagaacaatcaaagtattgactatacatcttgttagcaacataaattaa |
27756103 |
T |
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| Q |
208 |
tgcaccaaatagcatgtaca |
227 |
Q |
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|||| ||||||| ||||||| |
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| T |
27756102 |
tgcatcaaatagtatgtaca |
27756083 |
T |
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