View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14155_high_22 (Length: 206)

Name: NF14155_high_22
Description: NF14155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14155_high_22
NF14155_high_22
[»] chr8 (33 HSPs)
chr8 (70-140)||(43602313-43602383)
chr8 (70-140)||(30927821-30927891)
chr8 (70-139)||(43587753-43587822)
chr8 (70-127)||(11089701-11089758)
chr8 (71-139)||(6825168-6825236)
chr8 (74-140)||(2597054-2597120)
chr8 (70-128)||(36593676-36593734)
chr8 (74-140)||(37562035-37562101)
chr8 (70-140)||(38504281-38504351)
chr8 (70-140)||(41273626-41273696)
chr8 (70-127)||(34972189-34972246)
chr8 (74-140)||(11139007-11139073)
chr8 (70-128)||(19723096-19723154)
chr8 (70-140)||(20288644-20288714)
chr8 (70-140)||(21075273-21075343)
chr8 (74-140)||(30129520-30129586)
chr8 (71-140)||(33817268-33817337)
chr8 (74-139)||(36497773-36497838)
chr8 (71-140)||(41293613-41293681)
chr8 (70-121)||(1065547-1065598)
chr8 (72-118)||(8888385-8888432)
chr8 (74-140)||(5924921-5924987)
chr8 (70-140)||(6105325-6105395)
chr8 (74-140)||(36064141-36064207)
chr8 (72-114)||(41600313-41600355)
chr8 (72-113)||(11097147-11097188)
chr8 (72-137)||(20284821-20284886)
chr8 (72-137)||(21071450-21071515)
chr8 (74-127)||(37343501-37343554)
chr8 (70-118)||(13565408-13565456)
chr8 (72-124)||(26026900-26026952)
chr8 (70-106)||(29509399-29509435)
chr8 (71-139)||(35595322-35595390)
[»] chr4 (38 HSPs)
chr4 (70-140)||(24019861-24019931)
chr4 (70-140)||(51377183-51377253)
chr4 (70-140)||(5208217-5208287)
chr4 (70-140)||(9032891-9032961)
chr4 (70-140)||(27001299-27001369)
chr4 (70-140)||(47106022-47106092)
chr4 (70-140)||(51224728-51224798)
chr4 (70-140)||(52669499-52669569)
chr4 (70-140)||(56025367-56025437)
chr4 (74-138)||(15638243-15638307)
chr4 (70-140)||(4550445-4550515)
chr4 (70-140)||(8026654-8026724)
chr4 (70-128)||(44368092-44368150)
chr4 (74-139)||(55642499-55642564)
chr4 (72-139)||(46844133-46844200)
chr4 (74-140)||(2193703-2193769)
chr4 (70-140)||(3223100-3223170)
chr4 (74-140)||(18568709-18568775)
chr4 (74-140)||(20056493-20056559)
chr4 (74-140)||(32901440-32901506)
chr4 (74-127)||(19720535-19720588)
chr4 (72-117)||(33483998-33484043)
chr4 (70-139)||(45548674-45548743)
chr4 (74-118)||(8681074-8681118)
chr4 (70-106)||(31049021-31049057)
chr4 (72-140)||(34259937-34260005)
chr4 (91-139)||(40258313-40258361)
chr4 (70-106)||(43434473-43434509)
chr4 (70-106)||(54165061-54165097)
chr4 (70-113)||(24235458-24235501)
chr4 (73-140)||(37022372-37022439)
chr4 (70-140)||(1796476-1796545)
chr4 (72-114)||(9362703-9362745)
chr4 (70-140)||(31221524-31221594)
chr4 (74-127)||(32079233-32079286)
chr4 (74-139)||(36728516-36728581)
chr4 (70-106)||(20956484-20956520)
chr4 (70-106)||(45923511-45923547)
[»] scaffold0172 (1 HSPs)
scaffold0172 (70-128)||(17098-17156)
[»] chr7 (31 HSPs)
chr7 (70-140)||(33050294-33050364)
chr7 (70-140)||(26041421-26041491)
chr7 (72-140)||(42431834-42431902)
chr7 (74-137)||(8742497-8742560)
chr7 (70-121)||(29609767-29609818)
chr7 (70-136)||(116746-116812)
chr7 (74-140)||(10014849-10014915)
chr7 (70-140)||(17157244-17157314)
chr7 (70-139)||(23330021-23330088)
chr7 (70-140)||(30864307-30864377)
chr7 (74-140)||(42476462-42476528)
chr7 (72-140)||(42060768-42060836)
chr7 (74-121)||(1838353-1838400)
chr7 (72-139)||(25614713-25614780)
chr7 (70-137)||(29162169-29162236)
chr7 (70-121)||(35004133-35004184)
chr7 (70-140)||(2346949-2347019)
chr7 (70-140)||(20406652-20406722)
chr7 (70-140)||(27164727-27164797)
chr7 (74-120)||(37385127-37385173)
chr7 (70-128)||(38978615-38978672)
chr7 (70-140)||(44511250-44511320)
chr7 (70-139)||(33881595-33881664)
chr7 (74-138)||(47530185-47530249)
chr7 (70-121)||(3344992-3345043)
chr7 (70-140)||(30201370-30201440)
chr7 (70-139)||(30402083-30402150)
chr7 (70-140)||(46148277-46148347)
chr7 (72-113)||(23910277-23910318)
chr7 (70-127)||(39369426-39369483)
chr7 (70-110)||(46456557-46456597)
[»] chr6 (22 HSPs)
chr6 (70-140)||(2881444-2881514)
chr6 (70-140)||(3339389-3339459)
chr6 (70-140)||(15328600-15328670)
chr6 (71-140)||(3660244-3660313)
chr6 (70-139)||(15364771-15364840)
chr6 (71-140)||(28965731-28965800)
chr6 (72-140)||(27334975-27335043)
chr6 (72-140)||(27395715-27395783)
chr6 (74-140)||(1803980-1804046)
chr6 (70-140)||(2056894-2056964)
chr6 (70-140)||(2862183-2862253)
chr6 (70-140)||(25924754-25924824)
chr6 (74-140)||(11017493-11017559)
chr6 (70-121)||(31368502-31368556)
chr6 (70-140)||(237288-237358)
chr6 (77-139)||(6435148-6435210)
chr6 (70-140)||(34413202-34413272)
chr6 (71-139)||(29376607-29376675)
chr6 (70-137)||(21210370-21210437)
chr6 (74-128)||(12441650-12441704)
chr6 (74-128)||(17417128-17417182)
chr6 (74-140)||(33491849-33491915)
[»] chr5 (28 HSPs)
chr5 (70-140)||(7077229-7077299)
chr5 (70-137)||(36548270-36548337)
chr5 (70-140)||(3263398-3263468)
chr5 (74-140)||(8959271-8959337)
chr5 (70-140)||(9594589-9594659)
chr5 (70-140)||(11464013-11464083)
chr5 (70-140)||(15622155-15622225)
chr5 (71-140)||(33823585-33823654)
chr5 (70-140)||(12512904-12512974)
chr5 (74-140)||(17489459-17489525)
chr5 (72-119)||(10372182-10372229)
chr5 (70-137)||(35972685-35972751)
chr5 (70-140)||(9596704-9596774)
chr5 (78-140)||(12401303-12401365)
chr5 (70-140)||(15917916-15917986)
chr5 (70-140)||(30574267-30574337)
chr5 (70-139)||(30776731-30776800)
chr5 (72-140)||(8726278-8726346)
chr5 (70-106)||(31006190-31006226)
chr5 (70-117)||(5382674-5382721)
chr5 (73-140)||(22920385-22920452)
chr5 (70-140)||(1760472-1760542)
chr5 (70-128)||(4954589-4954647)
chr5 (70-128)||(12417749-12417807)
chr5 (70-140)||(16143608-16143678)
chr5 (72-117)||(4719654-4719699)
chr5 (91-140)||(28501728-28501777)
chr5 (70-106)||(41192720-41192756)
[»] chr3 (38 HSPs)
chr3 (70-140)||(11327219-11327289)
chr3 (70-140)||(41877799-41877869)
chr3 (70-140)||(52453982-52454052)
chr3 (70-140)||(13159772-13159842)
chr3 (70-140)||(40478177-40478247)
chr3 (70-140)||(45295629-45295699)
chr3 (74-140)||(54233395-54233461)
chr3 (72-121)||(14992205-14992254)
chr3 (71-140)||(36819067-36819136)
chr3 (70-137)||(53102792-53102859)
chr3 (74-140)||(23906881-23906947)
chr3 (70-140)||(34021353-34021423)
chr3 (70-128)||(50279977-50280035)
chr3 (71-140)||(32931809-32931878)
chr3 (70-139)||(35756092-35756161)
chr3 (70-127)||(42718243-42718300)
chr3 (76-140)||(2009765-2009828)
chr3 (70-128)||(8254150-8254208)
chr3 (70-140)||(30400046-30400116)
chr3 (74-128)||(51717564-51717618)
chr3 (72-113)||(23183611-23183652)
chr3 (70-139)||(43900884-43900953)
chr3 (70-139)||(44855363-44855432)
chr3 (72-140)||(50879706-50879774)
chr3 (74-118)||(53932285-53932329)
chr3 (70-121)||(3957908-3957959)
chr3 (70-140)||(28263656-28263726)
chr3 (70-140)||(30633704-30633774)
chr3 (70-112)||(42864206-42864248)
chr3 (70-140)||(46344525-46344595)
chr3 (72-114)||(48353000-48353042)
chr3 (75-140)||(25542866-25542931)
chr3 (71-140)||(35376442-35376511)
chr3 (71-139)||(27162358-27162426)
chr3 (72-140)||(27937075-27937143)
chr3 (72-140)||(47056417-47056485)
chr3 (72-140)||(47683901-47683969)
chr3 (72-124)||(49021715-49021767)
[»] scaffold0121 (1 HSPs)
scaffold0121 (71-137)||(29897-29963)
[»] scaffold0576 (1 HSPs)
scaffold0576 (70-139)||(9542-9611)
[»] chr2 (34 HSPs)
chr2 (70-127)||(36582380-36582437)
chr2 (71-140)||(37966467-37966536)
chr2 (70-140)||(23047973-23048043)
chr2 (70-140)||(30413622-30413692)
chr2 (70-140)||(38246641-38246711)
chr2 (70-139)||(33029992-33030061)
chr2 (70-140)||(3195977-3196047)
chr2 (70-128)||(4097067-4097125)
chr2 (74-140)||(12358424-12358490)
chr2 (73-139)||(29871248-29871314)
chr2 (70-140)||(38021467-38021536)
chr2 (70-140)||(44484546-44484616)
chr2 (71-140)||(22353066-22353135)
chr2 (72-140)||(10550351-10550419)
chr2 (70-117)||(33003957-33004004)
chr2 (72-139)||(45372574-45372641)
chr2 (70-128)||(6885033-6885091)
chr2 (70-140)||(12175218-12175288)
chr2 (70-140)||(27307135-27307205)
chr2 (74-140)||(38572050-38572116)
chr2 (72-140)||(6742302-6742370)
chr2 (70-106)||(6851561-6851597)
chr2 (72-139)||(38689021-38689088)
chr2 (74-140)||(42678657-42678721)
chr2 (74-140)||(12192058-12192124)
chr2 (70-140)||(34144442-34144512)
chr2 (74-140)||(36909738-36909803)
chr2 (70-139)||(3298995-3299064)
chr2 (76-140)||(9694957-9695021)
chr2 (70-106)||(27540148-27540184)
chr2 (76-140)||(28165240-28165304)
chr2 (80-140)||(36383573-36383633)
chr2 (72-140)||(43791683-43791751)
chr2 (72-128)||(45376232-45376288)
[»] chr1 (25 HSPs)
chr1 (70-138)||(5383872-5383940)
chr1 (71-140)||(49189102-49189171)
chr1 (72-139)||(50777315-50777382)
chr1 (70-140)||(6829675-6829745)
chr1 (70-140)||(13813669-13813739)
chr1 (70-140)||(19920873-19920943)
chr1 (74-140)||(25130814-25130880)
chr1 (70-113)||(10385552-10385595)
chr1 (70-140)||(26501406-26501476)
chr1 (74-140)||(42843238-42843304)
chr1 (74-127)||(7078394-7078447)
chr1 (72-140)||(9011756-9011824)
chr1 (74-121)||(16480055-16480102)
chr1 (77-140)||(36669267-36669330)
chr1 (74-140)||(26547345-26547411)
chr1 (74-140)||(29489253-29489319)
chr1 (70-140)||(32966378-32966448)
chr1 (70-140)||(43195979-43196049)
chr1 (70-140)||(50035428-50035498)
chr1 (74-140)||(50797891-50797957)
chr1 (70-140)||(25995571-25995643)
chr1 (70-139)||(27895651-27895720)
chr1 (72-117)||(41459612-41459657)
chr1 (72-128)||(3291317-3291373)
chr1 (74-138)||(51193027-51193091)
[»] scaffold0002 (1 HSPs)
scaffold0002 (70-140)||(147146-147216)
[»] scaffold0004 (1 HSPs)
scaffold0004 (70-137)||(249032-249099)
[»] scaffold0522 (1 HSPs)
scaffold0522 (70-140)||(2394-2464)
[»] scaffold0514 (1 HSPs)
scaffold0514 (70-140)||(1386-1456)
[»] scaffold0618 (1 HSPs)
scaffold0618 (70-140)||(3472-3542)
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-118)||(72063-72109)


Alignment Details
Target: chr8 (Bit Score: 55; Significance: 8e-23; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 43602313 - 43602383
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||    
T  43602313 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtc 43602383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 30927821 - 30927891
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||| | |||||||||    
T  30927821 gcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtc 30927891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 43587822 - 43587753
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||||| ||| ||||||    
T  43587822 gcaatgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggt 43587753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 11089758 - 11089701
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||    
T  11089758 gcaatgatatttgtacatccatttaatgacaattttggtgacaactttgtttttctct 11089701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 6825168 - 6825236
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||| ||| |||||| | ||||||||    
T  6825168 caataatatttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggt 6825236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 2597054 - 2597120
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||| || ||  |||||||||||||||||||||||||| |||||| | |||||||||    
T  2597054 tgatatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtc 2597120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 36593676 - 36593734
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| ||||||    
T  36593676 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctc 36593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 37562035 - 37562101
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||| |||||||||||||| |||||| | |||||||||    
T  37562035 tgatatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtc 37562101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 38504351 - 38504281
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| | |||| |||||||||||  |||||| |||||| ||| |||||||    
T  38504351 gcaatgatatttgtacatccatttaattacaattttggtgacaattttgtttttctctcttttgattggtc 38504281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 41273696 - 41273626
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| || |||||||||||| |||||| | |||||||||    
T  41273696 gcaatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtc 41273626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 34972246 - 34972189
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||  |||||| |||||    
T  34972246 gcaatgatatttgtacatctatttaatgacaactttggtgacaattttgtttttctct 34972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 11139073 - 11139007
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||| | ||  ||||||||||||||||||| |||||| ||| || |||||||||||    
T  11139073 tgatatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtc 11139007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 19723096 - 19723154
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||||| || |  |||||||||| ||||||||||||||| ||||||    
T  19723096 gcaatgatatttgtacatctatatcatgacaactttagtgacaaccttgtttttctctc 19723154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 20288714 - 20288644
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   | || ||||| |||||||| ||||||||||||| | |||||||||    
T  20288714 gcaatgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtc 20288644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 21075343 - 21075273
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   | || ||||| |||||||| ||||||||||||| | |||||||||    
T  21075343 gcaatgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtc 21075273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 30129586 - 30129520
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||||||||||| ||| || |||||| | |||||||||    
T  30129586 tgatatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtc 30129520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 33817337 - 33817268
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| ||||  | |||| ||| ||||||| ||||||| |||||| |||||||||||    
T  33817337 caatgatatttgtacatctatttcataacaattttagtgacaatcttgtttttctctctttttattggtc 33817268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 36497838 - 36497773
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||| | ||  ||||||||||| | |||||||||||| |||||| ||||||||||    
T  36497838 tgatatttgtacatctaattgatgacaactttgataacaaccttgtttttctctctttttattggt 36497773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 41293613 - 41293681
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||   |||||||||| ||||||| ||||||| |||||| | |||||||||    
T  41293613 caatgatatttgtacatccattccatgacaactttagtgacaa-cttgtttttctctcttcttattggtc 41293681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 1065598 - 1065547
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    |||||||||||||||||||||||   |||||||||| |||| ||||||||||    
T  1065598 gcaatgatatttgtacatccattccatgacaactttagtgataaccttgttt 1065547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 8888432 - 8888385
Alignment:
Q  72 aatgatatttgtacatccatt-tattgacaactttggtgacaaccttg 118  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||    
T  8888432 aatgatatttgtatatccattatagtgacaactttggtgacaaccttg 8888385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 5924987 - 5924921
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||| |||||||||||||  ||||||||||  |||||||||| ||| |||||| | |||||||||    
T  5924987 tgatatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtc 5924921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 6105325 - 6105395
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||| |||||||||||||||  ||||||||| |||||||| || |||  ||||| ||| |||||||    
T  6105325 gcaatgatacttgtacatccatttaaagacaactttagtgacaactttattttcctctcttttgattggtc 6105395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 36064207 - 36064141
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||| |||||||||||||| |||| || | |||| |||||||||||    
T  36064207 tgatatttgtacatccaattgatgataactttggtgacaaacttgcttttatctctttttattggtc 36064141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 41600313 - 41600355
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaac 114  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||    
T  41600313 aatgatatttgaacattcatttattgacaacttttgtgacaac 41600355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 11097188 - 11097147
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaa 113  Q
    ||||||||||||||| ||||||| |||||||||| |||||||    
T  11097188 aatgatatttgtacaaccatttagtgacaacttttgtgacaa 11097147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 20284886 - 20284821
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    ||||||||||| ||| ||||||  |||||||||| ||||||||||| ||| |||||| | ||||||    
T  20284886 aatgatatttgaacaaccatttgatgacaacttttgtgacaaccttctttttctctcttcttattg 20284821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 21071515 - 21071450
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    ||||||||||| ||| ||||||  |||||||||| ||||||||||| ||| |||||| | ||||||    
T  21071515 aatgatatttgaacaaccatttgatgacaacttttgtgacaaccttctttttctctcttcttattg 21071450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 37343554 - 37343501
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    ||||||||||||||||| ||  ||| ||||||||||||||||||| || |||||    
T  37343554 tgatatttgtacatccaattgatgataactttggtgacaaccttgattttctct 37343501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 13565408 - 13565456
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttg 118  Q
    ||||||||||||||||||| ||||| | ||||||||  |||||||||||    
T  13565408 gcaatgatatttgtacatcaatttaatcacaactttaatgacaaccttg 13565456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 26026900 - 26026952
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctc 124  Q
    ||||||||||| ||| |||||| ||||||||||| |||||||| || ||||||    
T  26026900 aatgatatttgaacaaccattttttgacaacttttgtgacaactttctttctc 26026952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 29509435 - 29509399
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    |||||||||||||||||| |||||| |||||||||||    
T  29509435 gcaatgatatttgtacattcatttaatgacaactttg 29509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 35595390 - 35595322
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||  | || ||| || |||||||||||||||| || |||||| | ||||||||    
T  35595390 caatgatatttgtacatctgtctaatgataagtttggtgacaaccttgcttttctctcttcttattggt 35595322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 8e-23; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 24019861 - 24019931
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  24019861 gcaatgatatttgtacatctatttaatgacaactttggtgacaaccttgtttctctctcttttgattggtc 24019931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 51377183 - 51377253
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||| | |||||||||    
T  51377183 gcaatgatatttgtacatccattccttgacaactttagtgacaaccttgtttttctctcttcttattggtc 51377253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 5208217 - 5208287
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  5208217 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 5208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 9032961 - 9032891
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  | |||||||| ||||||||||||||| |||||  |||||||||||    
T  9032961 gcaatgatatttgtacatccatttcattacaactttagtgacaaccttgtttttctctttttttattggtc 9032891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 27001299 - 27001369
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  27001299 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 27001369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 47106092 - 47106022
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  47106092 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 47106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 51224728 - 51224798
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||  ||||| ||| |||||||    
T  51224728 gcaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtc 51224798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 52669499 - 52669569
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||| ||||| ||||||| ||||||| |||||| |||||||||||    
T  52669499 gcaatgatatttgtacatccattttatgaccactttagtgacaatcttgtttttctctctttttattggtc 52669569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 56025437 - 56025367
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||| || |||||| ||| |||||||    
T  56025437 gcaatgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtc 56025367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 15638307 - 15638243
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattgg 138  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||| |||||| | |||||||    
T  15638307 tgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattgg 15638243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 4550515 - 4550445
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||| |||||||||||| ||||||||||||||||||  ||||||  ||||| ||| |||||||    
T  4550515 gcaatgatatttatacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtc 4550445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 8026654 - 8026724
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| |||||||| |||||| |||||| | |||||||||    
T  8026654 gcaatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtc 8026724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 44368092 - 44368150
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  44368092 gcaatgatatttgtacatccatttcatgacaactttagtgacaaccttatttttctctc 44368150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 55642499 - 55642564
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||| || | |||| ||||||||||    
T  55642499 tgatatttgtacatccaattaatgataactttggtgacaaccttgcttttatctctttttattggt 55642564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 46844133 - 46844200
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||  ||||| |||||  |||||||||||||||||| |||||| |||||| ||||||||||    
T  46844133 aatgatattttgacatctatttaaggacaactttggtgacaactttgtttttctctctttttattggt 46844200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 2193703 - 2193769
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||| |||||| ||||||| |||||| | |||||||||    
T  2193703 tgatatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtc 2193769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 3223170 - 3223100
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   ||| |||||| ||||||||||| ||| |||||| | |||||||||    
T  3223170 gcaatgatatttgtacatccattccatgaaaactttagtgacaaccttctttttctctcttcttattggtc 3223100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 18568709 - 18568775
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| || ||| || | |||||||||    
T  18568709 tgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtc 18568775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 20056559 - 20056493
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  |||||||||||||||||| |||| || |||||| | |||||||||    
T  20056559 tgatatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtc 20056493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 32901506 - 32901440
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||| || ||||||||||| ||||||| |||||| |||||||||||    
T  32901506 tgatatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtc 32901440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 19720535 - 19720588
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    |||||| |||||||||||||   |||||||||| ||||||||||||||||||||    
T  19720535 tgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctct 19720588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 33483998 - 33484043
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaacctt 117  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  33483998 aatgatatttgtacatccaattgatgacaactttggtgacaacctt 33484043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 45548674 - 45548743
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||| || || |||||||||| ||||| ||||||||| | |||  ||||||||||    
T  45548674 gcaatgatatttgtacatctatctaatgacaactttagtgacgaccttgtttttttctatttttattggt 45548743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 8681118 - 8681074
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttg 118  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  8681118 tgatatttgtacatccaattgatgacaactttggtgacaaccttg 8681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 31049057 - 31049021
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31049057 gcaatgatatttgtacatccatttaatgacaactttg 31049021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 34260005 - 34259937
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||| ||||||  |||||||||| ||||||| ||| ||| |||||| | |||||||||    
T  34260005 aatgatatttgtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtc 34259937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 40258361 - 40258313
Alignment:
Q  91 tttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    |||| |||||||||||||||||| ||||||| |||||| ||||||||||    
T  40258361 tttaatgacaactttggtgacaatcttgtttttctctctttttattggt 40258313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 43434509 - 43434473
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| |||||||||||    
T  43434509 gcaatgatatttgtacatccatttaatgacaactttg 43434473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 54165061 - 54165097
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| |||||||||||    
T  54165061 gcaatgatatttgtacatccatttaatgacaactttg 54165097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 24235501 - 24235458
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaa 113  Q
    ||||||||||||||||||||||||  |||||||||| |||||||    
T  24235501 gcaatgatatttgtacatccatttcatgacaactttagtgacaa 24235458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 37022439 - 37022372
Alignment:
Q  73 atgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||  |||||||||| |||| || ||||||| ||| |  |||||||||||    
T  37022439 atgatatttgtacatccatttcatgacaactttagtgataatcttgtttttctttttttttattggtc 37022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 1796545 - 1796476
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||| || |||||| |||||| | |||||||||    
T  1796545 gcaatgatatttgtacatccattccatgacaactttagtgac-actttgtttttctctcttcttattggtc 1796476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 9362745 - 9362703
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaac 114  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||    
T  9362745 aatgatatttgaacatccatttaatgacaacttttgtgacaac 9362703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 31221594 - 31221524
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| |||   |||||| ||| ||||||| ||||||| |||||| | |||||||||    
T  31221594 gcaatgatatttgtacatcaattccatgacaattttagtgacaatcttgtttttctctcttcttattggtc 31221524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 32079286 - 32079233
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    |||||||||||||| |||||  | |||||||| ||||||||||||||| |||||    
T  32079286 tgatatttgtacatacatttcataacaactttagtgacaaccttgtttttctct 32079233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 36728516 - 36728581
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||  ||||||| ||  ||||||||||||||||||| |||||| |||||| | ||||||||    
T  36728516 tgatatttacacatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggt 36728581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 20956484 - 20956520
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  20956484 gcaatgatatttgtacatctatttaatgacaactttg 20956520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 45923547 - 45923511
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  45923547 gcaatgatatttgtacatccatttaatgacatctttg 45923511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 17156 - 17098
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  17156 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctc 17098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 33050364 - 33050294
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| | |||||||||    
T  33050364 gcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtc 33050294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 26041491 - 26041421
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| |||||||| |||||| |||||| | |||||||||    
T  26041491 gcaatgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtc 26041421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 42431902 - 42431834
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  42431902 aatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 42431834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 8742560 - 8742497
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||| |||||| | ||||||    
T  8742560 tgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattg 8742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 29609767 - 29609818
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  29609767 gcaatgatatttgtacatcaatttaatgacaactttggtgacaactttgttt 29609818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 116812 - 116746
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttatt 136  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| ||||||| ||| || |||||||    
T  116812 gcaatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctttctttttatt 116746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 10014849 - 10014915
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||||||||||  |||||| |||||| |||||||||||    
T  10014849 tgatatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtc 10014915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 17157314 - 17157244
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||| ||| || |||||| ||| |||||||    
T  17157314 gcaatgatatttgtacatcaatttaatgacaactttggtgataactttgcttttctctcttttgattggtc 17157244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 23330088 - 23330021
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||| || |||||||||  || |||||||||||||||||||||||||  ||||||||||    
T  23330088 gcaatgatatttgtatattcatttattggaaattttggtgacaaccttgtttctctct--ttttattggt 23330021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 30864307 - 30864377
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||  | |||||||||    
T  30864307 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctcttttcttattggtc 30864377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 42476462 - 42476528
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  |||||||||||| ||||||||||||| | |||| |||||||||||    
T  42476462 tgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttttctctttttattggtc 42476528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 42060836 - 42060768
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |||  | |||||| ||| |||||||    
T  42060836 aatgatatttgtacatctatttaatgacaactttggtgacaactttgcctttctctcttttgattggtc 42060768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 1838353 - 1838400
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  1838353 tgatatttgtacatccaattgatgacaactttggtgacaaccttgttt 1838400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 25614713 - 25614780
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||| | ||  |||||| ||||||||||||||||||| |||||| | ||||||||    
T  25614713 aatgatatttgtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggt 25614780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 29162169 - 29162236
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    |||||||||||||||||| ||||   |||||||||| ||||||| ||||||| |||||| ||||||||    
T  29162169 gcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctctttttattg 29162236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 35004133 - 35004184
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||    
T  35004133 gcaatgatatttgtacatccattttatgacaactttagtgacaatcttgttt 35004184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 2346949 - 2347019
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| |||||  |||||||||| ||||||||||| ||| ||| || | |||||||||    
T  2346949 gcaatgatatttgtacattcattttatgacaactttagtgacaaccttatttttctttcttgttattggtc 2347019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 20406722 - 20406652
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| ||||||||||| | ||||||| || |||||| |||||| | |||| |||||||||||    
T  20406722 gcaatgatatttggacatccatttaataacaacttcggcgacaactttgtttttttctctttttattggtc 20406652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 27164727 - 27164797
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||| ||| |||||||| |||||| |||||| | |||||||||    
T  27164727 gcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtc 27164797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 37385127 - 37385173
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtt 120  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  37385127 tgatatttgtacatccaattgatgacaactttggtgacaaccttgtt 37385173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 38978672 - 38978615
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    |||||||||||||||||||| || || ||||||||| ||||||||||||||| ||||||    
T  38978672 gcaatgatatttgtacatcctttcat-gacaactttagtgacaaccttgtttttctctc 38978615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 44511320 - 44511250
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| |||||||  |||||| |||||  | |||||||||    
T  44511320 gcaatgatatttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtc 44511250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 33881595 - 33881664
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    |||||||||||||||||| |||||| ||| || |||||||||||| ||||||  ||||| ||| ||||||    
T  33881595 gcaatgatatttgtacattcatttaatgataattttggtgacaactttgttttcctctcttttgattggt 33881664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 47530185 - 47530249
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattgg 138  Q
    ||||||||||||||| ||||  ||||||||||||||| |||||||||| ||| || | |||||||    
T  47530185 tgatatttgtacatctatttcatgacaactttggtgataaccttgtttttctttcttcttattgg 47530249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 3345043 - 3344992
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    |||||||||||||||||| |||||| |||||| ||||  |||||||||||||    
T  3345043 gcaatgatatttgtacattcatttaatgacaattttgaagacaaccttgttt 3344992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 30201440 - 30201370
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| ||||   ||||||||||  |||||| ||| ||| |||||| |||||||||||    
T  30201440 gcaatgatatttgtacatacattctatgacaactttaatgacaatcttatttttctctctttttattggtc 30201370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 30402083 - 30402150
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||| ||||  ||| || |||||||||||| |||||||| |||  ||||||||||    
T  30402083 gcaatgatatttgtacatctatttcatgataattttggtgacaactttgtttctttct--ttttattggt 30402150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 46148347 - 46148277
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| ||| |||||| || ||||||||  | |||||||| |||||||||| ||| |||||||    
T  46148347 gcaatgatatttgaacaaccatttgttaacaactttcataacaaccttatttctctctcttttcattggtc 46148277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 23910318 - 23910277
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaa 113  Q
    ||||||||||||||| |||||| ||||||||||| |||||||    
T  23910318 aatgatatttgtacaaccattttttgacaacttttgtgacaa 23910277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 39369483 - 39369426
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    ||||||||||||  |||||||||||  ||||||||| |||||||| |||||| |||||    
T  39369483 gcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctct 39369426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 46456557 - 46456597
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtga 110  Q
    ||||||||||||||||||  ||||| |||||||||||||||    
T  46456557 gcaatgatatttgtacatttatttaatgacaactttggtga 46456597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 2881514 - 2881444
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||||    
T  2881514 gcaatgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtc 2881444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 3339389 - 3339459
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| ||||||| |||||| |||||||||||    
T  3339389 gcaatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtc 3339459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 15328670 - 15328600
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||| ||| |||||||    
T  15328670 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtc 15328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 3660244 - 3660313
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| |||||||||||    
T  3660244 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctctttttattggtc 3660313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 15364840 - 15364771
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||| ||| ||||||    
T  15364840 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggt 15364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 28965731 - 28965800
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||| ||| |||||||    
T  28965731 caatgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtc 28965800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 27335043 - 27334975
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||  ||||||||||  |||||||||||||| |||||| |||||||||||    
T  27335043 aatgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtc 27334975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 27395783 - 27395715
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||  ||||||||||  |||||||||||||| |||||| |||||||||||    
T  27395783 aatgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtc 27395715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 1804046 - 1803980
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||| |||||| | |||||||||    
T  1804046 tgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtc 1803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 2056964 - 2056894
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| ||||   |||||||||| |||||||||||||||||||||| | |||||||||    
T  2056964 gcaatgatatttgtacattcattccatgacaactttagtgacaaccttgtttctctctcttcttattggtc 2056894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 2862253 - 2862183
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||  | |||||||||    
T  2862253 gcaatgatatttggacatccatttaatgacaactttggtgacaattttgtttctctcttttcttattggtc 2862183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 25924754 - 25924824
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||||||  ||||| ||| |||||||    
T  25924754 gcaatgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtc 25924824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 11017559 - 11017493
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||   | |||||||| |||||||||||||||||||||| | |||||||||    
T  11017559 tgatatttgtacatccattccataacaactttagtgacaaccttgtttctctctcttcttattggtc 11017493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 31368502 - 31368556
Alignment:
Q  70 gcaatgatatttgtacatccatttat---tgacaactttggtgacaaccttgttt 121  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||| ||||||    
T  31368502 gcaatgatatttgtacatccatttatgaatgacaactttggtgacaactttgttt 31368556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 237288 - 237358
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| ||||| ||||| |||||||||| |||||| | |||||| |||||| | |||||||||    
T  237288 gcaatgatatttggacatctatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtc 237358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 6435210 - 6435148
Alignment:
Q  77 tatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    |||||||||||||| ||  |||||| ||||||||||||||||||| |||||| | ||||||||    
T  6435210 tatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggt 6435148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 34413272 - 34413202
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||| ||| || | |||| ||| |||||||    
T  34413272 gcaatgatatttgtacatcaatttaatgacaattttggtgacaactttgattttttctcttttgattggtc 34413202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 29376607 - 29376675
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    |||||||||||||||||| ||||| |||||| |||| |||||||| |||||  ||||| | ||||||||    
T  29376607 caatgatatttgtacatctatttagtgacaattttgatgacaaccatgttttgctctcttcttattggt 29376675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 21210437 - 21210370
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    |||||||||||| |||||||| | | ||||||||| | |||||||||||||| |||||| | ||||||    
T  21210437 gcaatgatatttatacatccagtgaatgacaacttagttgacaaccttgtttttctctcttcttattg 21210370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 12441704 - 12441650
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||| | ||  ||||||||||||||||||||||| || ||||||    
T  12441704 tgatatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctc 12441650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 17417128 - 17417182
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||| ||||| ||  |||||||||||||||||||||| ||| ||||||    
T  17417128 tgatatttgtatatccaattgatgacaactttggtgacaaccttatttttctctc 17417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 33491915 - 33491849
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||| |||||||||||||   |||||||||| | |||||||| |||||||||| | |||||||||    
T  33491915 tgatatatgtacatccatttgaagacaactttgattacaaccttatttctctctcttcttattggtc 33491849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 7077229 - 7077299
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||| |||||||    
T  7077229 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtc 7077299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 36548270 - 36548337
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    |||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||  ||||||||    
T  36548270 gcaatgatatttgtacatccatctaatgacaactttgatgacaaccttgtttttctctatttttattg 36548337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 3263398 - 3263468
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  3263398 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 3263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 8959337 - 8959271
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||| |||||||||||    
T  8959337 tgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtc 8959271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 9594659 - 9594589
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||| |||||||||| | |||||||||    
T  9594659 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttatttctctctcttcttattggtc 9594589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 11464013 - 11464083
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   | |||||||| ||||||||||||||| |||||| |||||||||||    
T  11464013 gcaatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctctttttattggtc 11464083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 15622225 - 15622155
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  15622225 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 15622155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 33823585 - 33823654
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  33823585 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 33823654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 12512974 - 12512904
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||| ||||||| |||||| | |||||||||    
T  12512974 gcaatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtc 12512904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 17489525 - 17489459
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||| | |||||||||    
T  17489525 tgatatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtc 17489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 10372182 - 10372229
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgt 119  Q
    |||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  10372182 aatgatatttgtacattcatttaatgacaactttggtgacaacattgt 10372229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 35972751 - 35972685
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||||||| ||| |||||| ||||||||    
T  35972751 gcaatcatatttgtacatcaatttattgataattttggtgacaaccttattt-tctctctttttattg 35972685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 9596704 - 9596774
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| ||||   |||||||||| ||||||| ||||||| |||||| | |||||||||    
T  9596704 gcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctcttcttattggtc 9596774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 12401365 - 12401303
Alignment:
Q  78 atttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||  |||||||||| ||||||||||| ||| |||||| | |||||||||    
T  12401365 atttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtc 12401303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 15917916 - 15917986
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| | |||||| || |||||||||| | |||||||||    
T  15917916 gcaatgatatttgtacatccattccatgacaactttagcgacaactttatttctctctcttcttattggtc 15917986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 30574267 - 30574337
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||| ||| |||||||| |||||| |||||| | |||||||||    
T  30574267 gcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtc 30574337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 30776800 - 30776731
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||  ||||  |||||| ||| |||||||  ||||||||||||| ||||||||||    
T  30776800 gcaatgatatttgtacatttatttcatgacaaatttagtgacaaatttgtttctctctctttttattggt 30776731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 8726278 - 8726346
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||| || |||||| || ||||||||    
T  8726278 aatgatatttgtacatctaattgatgacaactttggtgacagccttgcttttctctctttctattggtc 8726346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 31006226 - 31006190
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31006226 gcaatgatatttgtacatccatttaatgacaactttg 31006190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 5382721 - 5382674
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaacctt 117  Q
    ||||||||||||||| ||  ||||||||||||||||| ||||||||||    
T  5382721 gcaatgatatttgtatatttatttattgacaactttgatgacaacctt 5382674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 22920385 - 22920452
Alignment:
Q  73 atgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||| |||   |||||||| | ||||||||||||||| |||||| | |||||||||    
T  22920385 atgatatttgtacatctattacatgacaactatagtgacaaccttgtttttctctcttcttattggtc 22920452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 1760542 - 1760472
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||| ||  |||||||||||||||| ||| ||||| || || |||||| | |||||||||    
T  1760542 gcaatgatatttgtatatgtatttattgacaactttagtgtcaaccatgcttttctctcttcttattggtc 1760472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 4954647 - 4954589
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    |||||||||||| ||||||||||   | |||||||| ||||||||||||||| ||||||    
T  4954647 gcaatgatatttctacatccattctataacaactttagtgacaaccttgtttttctctc 4954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 12417807 - 12417749
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||||| ||||   |||||||||||||||||| |||| | ||||||    
T  12417807 gcaatgatatttgtacatctatttcacgacaactttggtgacaactttgtgtttctctc 12417749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 16143678 - 16143608
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||| |||||||| ||||| ||||||||||| |||||| | ||| | |||||| | |||||||||    
T  16143678 gcaatgatatatgtacatctatttaatgacaactttgatgacaatcatgtgtttctctcatcttattggtc 16143608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 4719654 - 4719699
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaacctt 117  Q
    ||||||||||||||| ||| || ||||||||||| |||||||||||    
T  4719654 aatgatatttgtacaaccaatttttgacaacttttgtgacaacctt 4719699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 28501777 - 28501728
Alignment:
Q  91 tttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||| |||||||||| ||||||||||||||| |||||| | |||||||||    
T  28501777 tttagtgacaactttagtgacaaccttgtttttctctcttcttattggtc 28501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 41192756 - 41192720
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| | |||||||||    
T  41192756 gcaatgatatttgtacatccatttaattacaactttg 41192720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 11327289 - 11327219
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| | |||||||||    
T  11327289 gcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtc 11327219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 41877869 - 41877799
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||  ||| |||||||    
T  41877869 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtc 41877799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 52453982 - 52454052
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||| | |||||||||    
T  52453982 gcaatgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtc 52454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 13159842 - 13159772
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  13159842 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 13159772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 40478177 - 40478247
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||||  ||||| ||| |||||||    
T  40478177 gcaatgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtc 40478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 45295629 - 45295699
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||  ||||| ||| |||||||    
T  45295629 gcaatgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtc 45295699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 54233395 - 54233461
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||| |||||| | |||||||||    
T  54233395 tgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtc 54233461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 14992254 - 14992205
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  14992254 aatgatatttgtacatccatttaatgacaactttggtgacaactttgttt 14992205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 36819136 - 36819067
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  36819136 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 36819067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 53102792 - 53102859
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | ||||||    
T  53102792 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattg 53102859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 23906881 - 23906947
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| || |||||| | |||||||||    
T  23906881 tgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtc 23906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 34021353 - 34021423
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| |||||||| |||||| |||||| | |||||||||    
T  34021353 gcaatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtc 34021423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 50279977 - 50280035
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||||||||||  ||||||||||  |||||||||||||| ||||||    
T  50279977 gcaatgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctc 50280035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 32931809 - 32931878
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||    |||||||| ||||||||||||||| |||||| | |||||||||    
T  32931809 caatgatatttgtacatccatttcacaacaactttagtgacaaccttgtttttctctcttcttattggtc 32931878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 35756161 - 35756092
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||| ||||||||||||| ||||  ||||||||||||||||||| |||||| |||||| | ||||||||    
T  35756161 gcaatcatatttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggt 35756092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 42718300 - 42718243
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    |||||||||| ||||||| |||||| |||||| |||||||||||| ||||||||||||    
T  42718300 gcaatgatatatgtacattcatttaatgacaattttggtgacaactttgtttctctct 42718243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 2009828 - 2009765
Alignment:
Q  76 atatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| |||||| |||||||||||||||||||||| || |||||| | |||||||||    
T  2009828 atatttgtacatcaatttat-gacaactttggtgacaaccttgcttttctctcttcttattggtc 2009765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 8254208 - 8254150
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||||||||||  |||||| ||| |||||||| || ||||||||||    
T  8254208 gcaatgatatttgtacatccatttcatgacaattttagtgacaacattatttctctctc 8254150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 30400046 - 30400116
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||| |||||||||||||||||   |||||||||| ||||||| ||||||| |||||| | |||||||||    
T  30400046 gcaattatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtc 30400116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 51717618 - 51717564
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| || ||||||    
T  51717618 tgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctc 51717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 23183611 - 23183652
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaa 113  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  23183611 aatgatatttgtacatccatttaatgataactttggtgacaa 23183652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 43900953 - 43900884
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||  |||||||||||  ||||||||| |||||||| |||||| |||||| | ||||||||    
T  43900953 gcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctctcttcttattggt 43900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 44855432 - 44855363
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||| ||||  |||||||||| ||||||| ||| ||| |||||| | ||||||||    
T  44855432 gcaatgatatttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggt 44855363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 50879774 - 50879706
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||   |||||||||| |||||||| |||||  |||||| | |||||||||    
T  50879774 aatgatatttgtacatccattccatgacaactttagtgacaactttgttgttctctcttcttattggtc 50879706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 53932285 - 53932329
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttg 118  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  53932285 tgatatttgtacatccaattgatgacaactttggtgacaaccttg 53932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 3957908 - 3957959
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    |||||||||||||||||||||||    ||||||||| |||||||||||||||    
T  3957908 gcaatgatatttgtacatccattccaggacaactttagtgacaaccttgttt 3957959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 28263726 - 28263656
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||| |||||||||  |||||||||| |||||||| || ||| ||| || | |||||||||    
T  28263726 gcaatgatatttgttcatccatttcatgacaactttagtgacaactttatttttctttcttcttattggtc 28263656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 30633704 - 30633774
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||  ||| ||||||  |||||||||| ||| |||||| | |||||||||    
T  30633704 gcaatgatatttgtacatctattttatgataactttaatgacaaccttatttttctctcttcttattggtc 30633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 42864206 - 42864248
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgaca 112  Q
    ||||||||||||||||||| || || |||||||||||||||||    
T  42864206 gcaatgatatttgtacatctatctaatgacaactttggtgaca 42864248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 46344595 - 46344525
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| |||||   ||||||||| ||||||||||| ||| ||| || | |||||||||    
T  46344595 gcaatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtc 46344525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 48353000 - 48353042
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaac 114  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  48353000 aatgatatttgtacatccattttttaacaacttttgtgacaac 48353042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 25542866 - 25542931
Alignment:
Q  75 gatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||| ||| |||||| |||||||| ||| ||  ||||| ||| |||||||    
T  25542866 gatatttgtacatccatttaatgataactttagtgacaactttggtttcctctcttttgattggtc 25542931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 35376442 - 35376511
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||| | | |||||| || ||||||||  |||||||||  |||||||||| |||||||||||    
T  35376442 caatgatatttgaagaaccatttgttaacaacttttatgacaacctcatttctctctctttttattggtc 35376511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 27162358 - 27162426
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||| ||  || ||| || ||||||||||    
T  27162358 caatgatatttctacattcatttattgacaactttattgacaactttacttttctatctttttattggt 27162426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 27937143 - 27937075
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| | ||  ||||||||||| ||||||||||| || | | || |||||||||||    
T  27937143 aatgatatttgtacatctaattgatgacaactttgatgacaaccttgcttttttatctttttattggtc 27937075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 47056417 - 47056485
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||  |||||| |||| ||||||||||  || |||||| || ||||||||    
T  47056417 aatgatatttgtacatccagttgatgacaattttgatgacaaccttacttttctctctttctattggtc 47056485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 47683969 - 47683901
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||| ||||||  |||||||||| | ||||||||| | | |||||| | |||||||||    
T  47683969 aatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtc 47683901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 49021715 - 49021767
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctc 124  Q
    |||||||||||||||||||||| || | |||||| |||||||| || ||||||    
T  49021715 aatgatatttgtacatccattttttaataacttttgtgacaactttctttctc 49021767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 29963 - 29897
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||| |||||| ||||||||    
T  29963 caatgatatttgtacatccatttaatgacaactttagttacaaccttgtttttctctctttttattg 29897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 9611 - 9542
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||| ||| ||||||    
T  9611 gcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggt 9542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 36582437 - 36582380
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  36582437 gcaatgatatttgtacatccatttgatgacaactttggtgacaaccttgtttttctct 36582380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 37966536 - 37966467
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||| | |||||||||    
T  37966536 caatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtc 37966467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 23047973 - 23048043
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  23047973 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 23048043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 30413622 - 30413692
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||| || |||||| ||| |||||||    
T  30413622 gcaatgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtc 30413692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 38246641 - 38246711
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| |||   |||||||||| |||||||||||||||||||||| | |||||||||    
T  38246641 gcaatgatatttgtacatcaattccatgacaactttagtgacaaccttgtttctctctcttcttattggtc 38246711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 33029992 - 33030061
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||  ||||||||||    
T  33029992 gcaatgatatttgtacatctatctaatgacaactttgatgacaaccttgtttttctctatttttattggt 33030061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 3195977 - 3196047
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| || |||||||||||| |||||| | |||||||||    
T  3195977 gcaatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtc 3196047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 4097125 - 4097067
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    |||||||||||||| |||||||||| | |||| ||||||||||||||||||| ||||||    
T  4097125 gcaatgatatttgtccatccatttaataacaattttggtgacaaccttgtttttctctc 4097067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 12358490 - 12358424
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| || ||| || |||||||||||    
T  12358490 tgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtc 12358424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 29871248 - 29871314
Alignment:
Q  73 atgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||| |||| ||||  ||||||||||||||||||| ||||||||||||| | ||||||||    
T  29871248 atgatatttgtccatctatttcatgacaactttggtgacaactttgtttctctctcttcttattggt 29871314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 38021536 - 38021467
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||  ||||||||||||| ||| |||||||    
T  38021536 gcaatgatatttgtacatc-atttaatgataactttggtgacaattttgtttctctctcttttgattggtc 38021467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 44484546 - 44484616
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||  |||||||||| |||||||| |||||| |||||| | |||||||||    
T  44484546 gcaatgatatttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtc 44484616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 22353066 - 22353135
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||| ||| || |||||||| |||||||| | |||||| | |||||||||    
T  22353066 caatgatatttgtacatccatttaatgataattttggtgataaccttgtatttctctcttcttattggtc 22353135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 10550351 - 10550419
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||| |||||| |||||  |||||||||||    
T  10550351 aatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtc 10550419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 33004004 - 33003957
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaacctt 117  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  33004004 gcaatgatatttgtacatccttttaatgacaactttggtgataacctt 33003957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 45372641 - 45372574
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    |||||||||||||||| |||||| |||||||||||||||| | ||||||| | | || ||||||||||    
T  45372641 aatgatatttgtacattcatttaatgacaactttggtgacgatcttgtttttatatctttttattggt 45372574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 6885091 - 6885033
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    |||||||||||||||||| |||||  |||||||||| |||||||| |||||| ||||||    
T  6885091 gcaatgatatttgtacattcatttcatgacaactttagtgacaactttgtttttctctc 6885033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 12175218 - 12175288
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||| ||||||  ||||| ||| |||||||    
T  12175218 gcaatgatatttgtacatttatttaatgataactttggtgacaactttgttttcctctcttttgattggtc 12175288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 27307135 - 27307205
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||| ||||||||||   |||||||||| ||||||||||| ||| |||||| | |||||||||    
T  27307135 gcaatgatatttatacatccattccatgacaactttagtgacaaccttatttttctctcttcttattggtc 27307205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 38572116 - 38572050
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||| || ||  | |||||||||||||||||||||||| |||||| | |||||||||    
T  38572116 tgatatttgtacattcaattgataacaactttggtgacaaccttgtttttctctcttcttattggtc 38572050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 6742302 - 6742370
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||| |||||||  ||||| ||||||||||| ||||||| ||| |||||||||| | |||||||||    
T  6742302 aatgataattgtacaatcatttgttgacaacttttgtgacaatcttctttctctctcttcttattggtc 6742370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 6851561 - 6851597
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| |||||||||||    
T  6851561 gcaatgatatttgtacatccatttaatgacaactttg 6851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 38689088 - 38689021
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||| ||| ||||||| ||| || ||| | ||||||||| |||||||||| ||||||||||    
T  38689088 aatgatatttgaacaaccatttagtgaaaatttttgggacaaccttctttctctctctttttattggt 38689021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 42678721 - 42678657
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||| |||||||||||||  |||||||||||  || ||||||||||||||||  |||||||||||    
T  42678721 tgatatatgtacatccatttcatgacaactttgacgagaaccttgtttctctct--ttttattggtc 42678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 12192124 - 12192058
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  | | ||||||||||||||||||| || |||||  |||||||||||    
T  12192124 tgatatttgtacatccaattgataataactttggtgacaaccttgcttttctctatttttattggtc 12192058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 34144442 - 34144512
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||| || |||   |||||||||| ||||||| ||||||| |||||| | |||||||||    
T  34144442 gcaatgatatttgtacctcaattccatgacaactttagtgacaatcttgtttttctctcttcttattggtc 34144512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 36909738 - 36909803
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||  | ||||||||| ||||||| |||||| |||||| | |||||||||    
T  36909738 tgatatttgtacatccatttcat-acaactttgatgacaactttgtttttctctcttcttattggtc 36909803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 3298995 - 3299064
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||| || |||||| ||||| ||| || ||||||||||| ||| |||||||||| | ||||||||    
T  3298995 gcaatgataattatacatctatttaatgataattttggtgacaatcttatttctctctcttcttattggt 3299064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 9694957 - 9695021
Alignment:
Q  76 atatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||| ||||| ||  ||||||||||||||||||||||| || |||||  |||||| ||||    
T  9694957 atatttgtaaatccaattgatgacaactttggtgacaaccttgcttttctctatttttatcggtc 9695021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 27540184 - 27540148
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttg 106  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  27540184 gcaatgatatttgtacatccatttaatgataactttg 27540148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 28165304 - 28165240
Alignment:
Q  76 atatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||| ||| ||||||  | ||||||||  |||||||||| |||||||||| |||||||||||    
T  28165304 atatttgaacaaccatttgctaacaactttcatgacaaccttttttctctctctttttattggtc 28165240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 36383633 - 36383573
Alignment:
Q  80 ttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||| ||||  | |||||||| ||||||||||||||| |||||| | |||||||||    
T  36383633 ttgtacatcaatttcataacaactttagtgacaaccttgtttttctctcttcttattggtc 36383573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 43791683 - 43791751
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||| ||| || |||| |||||||||| ||||||||||   || |||||| |||||||||||    
T  43791683 aatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctctttttattggtc 43791751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 45376288 - 45376232
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    ||||||||||||||| ||| || ||||||||||| ||||||||| | | ||||||||    
T  45376288 aatgatatttgtacaaccactttttgacaacttttgtgacaaccctctctctctctc 45376232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 8e-17; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 5383940 - 5383872
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattgg 138  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||| ||| |||||    
T  5383940 gcaatgatatttgtacatccatttaattacaactttggtgacaactttgtttttctctcttttgattgg 5383872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 49189102 - 49189171
Alignment:
Q  71 caatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||| ||||||||||||||||||  ||||||  ||||| ||| |||||||    
T  49189102 caatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtc 49189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 50777315 - 50777382
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||||||||| ||  |||||| ||||||||||||||||||| |||||| | ||||||||    
T  50777315 aatgatatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggt 50777382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 6829675 - 6829745
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||| ||||||| |||||| | |||||||||    
T  6829675 gcaatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtc 6829745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 13813739 - 13813669
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   | |||||||| ||||||||||||||| |||||| | |||||||||    
T  13813739 gcaatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctcttcttattggtc 13813669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 19920943 - 19920873
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||  |||||||||||  |||||||||||||||||| |||||| |||||| | |||||||||    
T  19920943 gcaatgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtc 19920873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 25130880 - 25130814
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||| ||||  |||||||||| ||||||||||||||| |||||| | |||||||||    
T  25130880 tgatatttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtc 25130814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 10385595 - 10385552
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaa 113  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  10385595 gcaatgatatttgtacatccatttaatgataactttggtgacaa 10385552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 26501476 - 26501406
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| |||   ||||||||||  |||||||||||||| |||||| | |||||||||    
T  26501476 gcaatgatatttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtc 26501406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 42843238 - 42843304
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||| ||  ||| || ||||||||||||||||||| |||||| | |||||||||    
T  42843238 tgatatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtc 42843304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 7078394 - 7078447
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctct 127  Q
    |||||| |||||||||||||   |||||||||| ||||||||||||||||||||    
T  7078394 tgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctct 7078447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 9011824 - 9011756
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||||  ||||||  || ||||||| ||||||| |||||| | |||||||||    
T  9011824 aatgatatttgtacatccatttcatgacaatgttagtgacaatcttgtttttctctcttcttattggtc 9011756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 16480102 - 16480055
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgttt 121  Q
    |||||||||||||| || || |||||||||||||| ||||||||||||    
T  16480102 tgatatttgtacattcaattgttgacaactttggtaacaaccttgttt 16480055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 36669267 - 36669330
Alignment:
Q  77 tatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||| |||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  36669267 tatttgtaaatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 36669330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 26547411 - 26547345
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||| |||||||||||||   |||||||||| |||||||||| |||||||||  ||| |||||||    
T  26547411 tgatatatgtacatccatttgaagacaactttgatgacaaccttatttctctcttttttaattggtc 26547345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 29489253 - 29489319
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||  ||||  |||||||||| ||||||||||||||| ||| || | |||||||||    
T  29489253 tgatatttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtc 29489319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 32966448 - 32966378
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||| ||| | ||||| | |||||||| ||||||||||  ||| |||||| |||||||||||    
T  32966448 gcaatgatatttgaacaactatttactaacaacttttgtgacaacctcatttttctctctttttattggtc 32966378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 43195979 - 43196049
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||| ||||||||||||| ||||| ||||||||||||||| ||| ||| |  |||||| ||| |||||||    
T  43195979 gcaataatatttgtacatctatttaatgacaactttggtgataactttgatgttctctcttttgattggtc 43196049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 50035428 - 50035498
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| ||||  |||||||||| |||||||| || ||| |||||  | |||||||||    
T  50035428 gcaatgatatttgtacatctatttcatgacaactttagtgacaactttatttttctcttttgttattggtc 50035498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 50797957 - 50797891
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||| | ||  ||| |||||||||||||| ||||||| | |||| |||||||||||    
T  50797957 tgatatttgtacatctaattgatgataactttggtgacaaacttgtttttatctctttttattggtc 50797891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 25995643 - 25995571
Alignment:
Q  70 gcaatgatatttgtacatccatttat--tgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||| || | |  ||||||||||  |||||||||| ||| |||||| |||||||||||    
T  25995643 gcaatgatatttgtacatctatatttcatgacaactttaatgacaaccttatttttctctctttttattggtc 25995571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 27895651 - 27895720
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggt 139  Q
    ||||||||||||  |||| ||||||  ||||||||| |||||||| |||||| |||||| | ||||||||    
T  27895651 gcaatgatattttgacattcatttaaggacaactttagtgacaactttgtttttctctcttcttattggt 27895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 41459612 - 41459657
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaacctt 117  Q
    |||||||||||||||| || ||  ||||||||||||||||||||||    
T  41459612 aatgatatttgtacattcaattgatgacaactttggtgacaacctt 41459657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 3291317 - 3291373
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctc 128  Q
    |||||||||||||||||||||   |||||| |||  ||| |||||||||||||||||    
T  3291317 aatgatatttgtacatccattccatgacaattttaatgataaccttgtttctctctc 3291373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 51193027 - 51193091
Alignment:
Q  74 tgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattgg 138  Q
    |||||| |||||||||||||  ||||||||||  ||||||| |||||| |||||| | |||||||    
T  51193027 tgatatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattgg 51193091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 147146 - 147216
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | |||||||||    
T  147146 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtc 147216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 249032 - 249099
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattg 137  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| | ||||||    
T  249032 gcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattg 249099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 2394 - 2464
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    ||||||||||||||||||||| ||  ||| || ||||||||||| |||| || |||||| |||||||||||    
T  2394 gcaatgatatttgtacatccaattgatgataattttggtgacaatcttgattttctctctttttattggtc 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 1386 - 1456
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||||||||   |||||| ||| |||||||| |||||| |||||| | |||||||||    
T  1386 gcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtc 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 3542 - 3472
Alignment:
Q  70 gcaatgatatttgtacatccatttattgacaactttggtgacaaccttgtttctctctccttttattggtc 140  Q
    |||||||||||||||||| |||||   ||||||||| ||||||||||| ||| ||| || | |||||||||    
T  3542 gcaatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtc 3472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 72063 - 72109
Alignment:
Q  72 aatgatatttgtacatccatttattgacaactttggtgacaaccttg 118  Q
    ||||||||||||||||| || |  |||||||||||||||||||||||    
T  72063 aatgatatttgtacatctatatggtgacaactttggtgacaaccttg 72109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University