View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14155_low_30 (Length: 202)
Name: NF14155_low_30
Description: NF14155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14155_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 31088641 - 31088548
Alignment:
| Q |
54 |
ctcgagactataagatttaagggttacttattgagagtgtgggttgaacataatcctatccacgaatcaacgaaagtgaacccacttctctgtg |
147 |
Q |
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| T |
31088641 |
ctcgagactataagatttaagggttacttattgagagtgtgggttgaacataattgtatccacgaatcaacgaaagtgaacccacttctctgtg |
31088548 |
T |
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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 31088497 - 31088461
Alignment:
| Q |
100 |
aacataatcctatccacgaatcaacgaaagtgaaccc |
136 |
Q |
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| T |
31088497 |
aacataattgtatccacgaatcaacgaaagtgaaccc |
31088461 |
T |
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