View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14157_low_3 (Length: 305)
Name: NF14157_low_3
Description: NF14157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14157_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 14083712 - 14083423
Alignment:
| Q |
1 |
gtatatgtaatgctagtgttagtgttctacgaggataaatgaaacaatcaacggactaaaagaatattgaaaaattgcattttacttctccaattttact |
100 |
Q |
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| T |
14083712 |
gtatatgtaatgctagtgttagtgttctacgaggataaatgaaacaatcaacggactaaaagaatattgaaaa-ttgcattttacttctccaattttact |
14083614 |
T |
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| Q |
101 |
tgaaaaatgcattttacaactctggaattgtcaatcagagctgtaaaaattttgtttcaagtttagtataagatgttaaacttcttataaatcaatcttg |
200 |
Q |
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| T |
14083613 |
tgaaaaatgcattttacaactctggaattgtcaatcagagctgtaaaaattttgtttcaagtttagtataagatgttaaacttcttataaatcaatcttg |
14083514 |
T |
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| Q |
201 |
acaaatcccgtctcgattgtgcaagtggaaaccattttgagaacgaggggggaggaaattttttcaattacacgtagtattatgaaacaaa |
291 |
Q |
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| T |
14083513 |
acaaatcccgtctggattgtgcaagtggaaaccattttgagaacgaggggggaggaaattttttcaattacacatagtattatgaaacaaa |
14083423 |
T |
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