View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14158_low_5 (Length: 361)
Name: NF14158_low_5
Description: NF14158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14158_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 37063786 - 37064120
Alignment:
| Q |
17 |
aaaagattgaatgaaatgtccaaataatccaaactattttccctacctaatctgtggcagaacataggggaaatggttccaaagaaagaattgtgtgaca |
116 |
Q |
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| T |
37063786 |
aaaagattgaatgaaatgtccaaataatccaaactattttccctacctaatctgtggcagaacataggggaaatggttccaaagaaagaattgtgtgaca |
37063885 |
T |
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| Q |
117 |
aatccaaatagatgacatttgctgatatatgtgggagccctcctctgaaattattgtggtccataaatagaagttccgagtttagcgtgacatttgataa |
216 |
Q |
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| T |
37063886 |
aatccaaatagatgacatttgctgatatatgtgggagccctcctctgaaattattgtggtccataaatagaagttccgagtttagcgtgacatttgataa |
37063985 |
T |
|
| Q |
217 |
gtctgcactcatgctgttgttagacaagttaagctgtgtaatattagttacaaatctccaaaatatgtctccatctatggatgaaactctagagttagga |
316 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37063986 |
gtctgcactcatgctgttgttagacaagttaaggtgtgtaatattagttacaaatctccaaaatatgtctccatctatggatgaaactctagagttagga |
37064085 |
T |
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| Q |
317 |
atctcaagatattctagcgacctatgtgtttatat |
351 |
Q |
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||||||||||||||||| ||||| ||||| ||||| |
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| T |
37064086 |
atctcaagatattctagtgacctttgtgtatatat |
37064120 |
T |
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