View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14158_low_8 (Length: 313)
Name: NF14158_low_8
Description: NF14158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14158_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 2668442 - 2668158
Alignment:
| Q |
16 |
attaagctaatcacaagcgtccaagattcattatcttgtgaaacaattgatttactttcaaaacctctcnnnnnnnnttgatttactttcaaagataaag |
115 |
Q |
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| T |
2668442 |
attaagctaatcacaagcgtccaagattcattatcttatgaaacaactgatttactttcaaaacctctcaaaaaaaattgatttactttcaaagataaag |
2668343 |
T |
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| Q |
116 |
tttcaccaaattaaatatttct-agaatgcgggtcgggtctaatttaacctatataaaaccgtcttgtaattaaggtgatgaaagccccatttatatata |
214 |
Q |
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| T |
2668342 |
tttcaccaaattaaatatttcttagaatgcgggtcgggtctaatttaacctatataaaaccgtcttgtaattaacgtgatgaaaaccccacttatatata |
2668243 |
T |
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| Q |
215 |
cacattttaaagttttatcttatcaaatgtagtattcttaactcactctcacgctcaaaactaaatatttgaagcattacccatat |
300 |
Q |
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| T |
2668242 |
cgcattttaaagttttatcttatcaaatgtaggactattaact-actctcacgctcaaaactaaatatatgaagcatgacccatat |
2668158 |
T |
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