View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14159_high_7 (Length: 311)
Name: NF14159_high_7
Description: NF14159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14159_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 292
Target Start/End: Complemental strand, 33127189 - 33126905
Alignment:
| Q |
9 |
catactagagtcctaactaaatatt-gcttcaaaccgttcatacatggctttagaagttaaaaagatggcaatatcaagagaagtatcaacaattatatg |
107 |
Q |
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| T |
33127189 |
catactagagtcctaactaaatatttgcttcaaaccgttcatacatggctttagaagttaaaaagatggcaatatcaagagaattatcaacaattatatg |
33127090 |
T |
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| Q |
108 |
gctagtctcgtggagtcttattatgatctatcatgttagtttagccgaaagagttttggaagacgaaaaaccagaaattgttgtcatgnnnnnnngaagt |
207 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
33127089 |
gctagtctcgtggagtcttattatgatctatcacgttagtttagccgaaagagttttggaagacgaaaaaccagaaattgttgtcatgaaaaaaacaagt |
33126990 |
T |
|
| Q |
208 |
ttcttctggtatagtggagagtcgtcctatgaacgtgtttggcctgtgagtttatcaaacacttatgttttttgttgtttattac |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33126989 |
ttcttctggtatagtggagagtcgtcctatgaacgtgtttggcctgtgagtttatcaaacacttatgttttttgttgtttattac |
33126905 |
T |
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